| rec. | Subject | Hit Length | Description | Align.Len | E value | Bit score | % ident. | % pos. | GO associations |
811 | P53883 | 403 | NOP13_YEAST Nucleolar protein 13 OS=Saccharom... | 75 | 3.1 | 33.1 | 27 | 52 | GO:0005730; C:nucleolus; IDA:SGD.::GO:0030684; C:preribosome; IDA:SGD. | | | | | | | | | | GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW. | | | | | | | | | | | 812 | Q6ZN30 | 1099 | BNC2_HUMAN Zinc finger protein basonuclin-2 O... | 96 | 3.1 | 33.1 | 30 | 39 | GO:0005737; C:cytoplasm; IDA:HPA.::GO:0005634; C:nucleus; IDA:HPA.::GO:0005886; C:plasma membrane; IDA:HPA. | | | | | | | | | | GO:0008270; F:zinc ion binding; IEA:InterPro. | | | | | | | | | | GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW. | 813 | Q9CPN8 | 579 | IF2B3_MOUSE Insulin-like growth factor 2 mRNA... | 164 | 3.3 | 33.1 | 22 | 46 | GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.::GO:0005634; C:nucleus; IEA:UniProtKB-SubCell. | | | | | | | | | | GO:0003730; F:mRNA 3'-UTR binding; ISS:UniProtKB.::GO:0000166; F:nucleotide binding; IEA:InterPro. | | | | | | | | | | GO:0006417; P:regulation of translation; IEA:UniProtKB-KW. | 814 | Q9GRW7 | 697 | NONA_DROVI Protein no-on-transient A OS=Droso... | 149 | 3.4 | 33.1 | 23 | 40 | | | | | | | | | | | GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW. | | | | | | | | | | GO:0050896; P:response to stimulus; IEA:UniProtKB-KW.::GO:0007601; P:visual perception; IEA:UniProtKB-KW. | 815 | P78814 | 365 | SRP2_SCHPO Pre-mRNA-splicing factor srp2 OS=S... | 182 | 3.5 | 32.7 | 22 | 39 | GO:0005634; C:nucleus; IDA:PomBase. | | | | | | | | | | GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0008143; F:poly(A) RNA binding; ISS:PomBase.::GO:0046982; F:protein heterodimerization activity; IPI:PomBase. | | | | | | | | | | GO:0006406; P:mRNA export from nucleus; ISS:PomBase.::GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.::GO:0008380; P:RNA splicing; IEA:UniProtKB-KW. | 816 | Q6ZS17 | 1223 | FA65A_HUMAN Protein FAM65A OS=Homo sapiens (H... | 103 | 3.9 | 33.1 | 26 | 37 | GO:0005737; C:cytoplasm; ISS:UniProtKB. | | | | | | | | | | GO:0005488; F:binding; IEA:InterPro. | | | | | | | | | | | 817 | O13620 | 833 | MRD1_SCHPO Multiple RNA-binding domain-contai... | 89 | 3.9 | 32.7 | 26 | 48 | GO:0030686; C:90S preribosome; ISS:PomBase.::GO:0005730; C:nucleolus; IDA:PomBase. | | | | | | | | | | GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0003723; F:RNA binding; ISS:PomBase. | | | | | | | | | | GO:0006364; P:rRNA processing; ISS:PomBase.::GO:0034462; P:small-subunit processome assembly; ISS:PomBase. | 818 | P40561 | 250 | SGN1_YEAST RNA-binding protein SGN1 OS=Saccha... | 107 | 4 | 32.3 | 25 | 50 | GO:0005737; C:cytoplasm; IDA:SGD. | | | | | | | | | | GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0008143; F:poly(A) RNA binding; IDA:SGD.::GO:0005515; F:protein binding; IPI:IntAct. | | | | | | | | | | GO:0016071; P:mRNA metabolic process; IGI:SGD. | 819 | O60812 | 293 | HNRCL_HUMAN Heterogeneous nuclear ribonucleop... | 81 | 4.2 | 32.3 | 25 | 52 | GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.::GO:0030529; C:ribonucleoprotein complex; IEA:UniProtKB-KW. | | | | | | | | | | GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW. | | | | | | | | | | | 820 | P32385 | 249 | RNP1_YEAST Ribonucleoprotein 1 OS=Saccharomyc... | 93 | 4.7 | 32 | 24 | 46 | GO:0005737; C:cytoplasm; IDA:SGD. | | | | | | | | | | GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW. | | | | | | | | | | GO:0042254; P:ribosome biogenesis; IMP:SGD. | 821 | O88453 | 931 | SAFB1_RAT Scaffold attachment factor B1 OS=Ra... | 98 | 4.7 | 32.7 | 27 | 47 | GO:0005634; C:nucleus; IDA:RGD. | | | | | | | | | | GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0019901; F:protein kinase binding; IPI:RGD.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW.::GO:0043565; F:sequence-specific DNA binding; IDA:RGD. | | | | | | | | | | GO:0050684; P:regulation of mRNA processing; IDA:RGD.::GO:0006357; P:regulation of transcription from RNA polymerase II promoter; IDA:RGD.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW. | 822 | D3YXK2 | 937 | SAFB1_MOUSE Scaffold attachment factor B1 OS=... | 98 | 5 | 32.7 | 27 | 47 | GO:0005634; C:nucleus; IEA:UniProtKB-SubCell. | | | | | | | | | | GO:0003682; F:chromatin binding; IDA:UniProtKB.::GO:0001047; F:core promoter binding; IDA:UniProtKB.::GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0005515; F:protein binding; IPI:UniProtKB.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW. | | | | | | | | | | GO:0040007; P:growth; IMP:MGI.::GO:0042445; P:hormone metabolic process; IMP:MGI.::GO:0030520; P:intracellular estrogen receptor signaling pathway; IMP:MGI.::GO:0045944; P:positive regulation of transcription from RNA polymerase II promoter; IMP:UniProtKB.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW. | 823 | Q4WJA1 | 413 | MCA1A_ASPFU Metacaspase-1A OS=A1100) (Aspergi... | 76 | 5.2 | 32.3 | 36 | 38 | | | | | | | | | | | GO:0004197; F:cysteine-type endopeptidase activity; IEA:InterPro. | | | | | | | | | | GO:0006915; P:apoptotic process; IEA:UniProtKB-KW.::GO:0006508; P:proteolysis; IEA:UniProtKB-KW. | 824 | B0XPP3 | 413 | MCA1A_ASPFC Metacaspase-1A OS=(Aspergillus fu... | 76 | 5.2 | 32.3 | 36 | 38 | | | | | | | | | | | GO:0004197; F:cysteine-type endopeptidase activity; IEA:InterPro. | | | | | | | | | | GO:0006915; P:apoptotic process; IEA:UniProtKB-KW.::GO:0006508; P:proteolysis; IEA:UniProtKB-KW. | 825 | Q62176 | 237 | RBM38_MOUSE RNA-binding protein 38 OS=Mus mus... | 48 | 7.6 | 31.6 | 33 | 52 | GO:0005829; C:cytosol; IEA:UniProtKB-SubCell.::GO:0005634; C:nucleus; IEA:UniProtKB-SubCell. | | | | | | | | | | GO:0000166; F:nucleotide binding; IEA:InterPro. | | | | | | | | | | GO:0030154; P:cell differentiation; IEA:UniProtKB-KW.::GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.::GO:0010830; P:regulation of myotube differentiation; IDA:UniProtKB.::GO:0008380; P:RNA splicing; IEA:UniProtKB-KW. | 826 | Q32LC7 | 465 | G3BP1_BOVIN Ras GTPase-activating protein-bin... | 52 | 5.7 | 32.3 | 37 | 46 | GO:0005829; C:cytosol; IEA:UniProtKB-SubCell.::GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.::GO:0005886; C:plasma membrane; IEA:UniProtKB-SubCell. | | | | | | | | | | GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0003677; F:DNA binding; IEA:UniProtKB-KW.::GO:0004519; F:endonuclease activity; IEA:UniProtKB-KW.::GO:0004386; F:helicase activity; IEA:UniProtKB-KW.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW. | | | | | | | | | | GO:0006810; P:transport; IEA:UniProtKB-KW. | 827 | P39927 | 425 | PTI1_YEAST Protein PTI1 OS=Saccharomyces cere... | 80 | 5.8 | 32 | 24 | 54 | GO:0005847; C:mRNA cleavage and polyadenylation specificity factor complex; IDA:SGD. | | | | | | | | | | GO:0003676; F:nucleic acid binding; IEA:InterPro.::GO:0000166; F:nucleotide binding; IEA:InterPro. | | | | | | | | | | GO:0006379; P:mRNA cleavage; IMP:SGD.::GO:0006378; P:mRNA polyadenylation; IMP:SGD.::GO:0031126; P:snoRNA 3'-end processing; IMP:SGD.::GO:0030847; P:termination of RNA polymerase II transcription, exosome-dependent; IMP:SGD.::GO:0030846; P:termination of RNA polymerase II transcription, poly(A)-coupled; IPI:SGD. | 828 | Q54J05 | 241 | RU2B_DICDI U2 small nuclear ribonucleoprotein... | 97 | 6.1 | 31.6 | 24 | 46 | GO:0005681; C:spliceosomal complex; IEA:UniProtKB-KW. | | | | | | | | | | GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0017069; F:snRNA binding; IEA:InterPro. | | | | | | | | | | GO:0000398; P:nuclear mRNA splicing, via spliceosome; IEA:InterPro. | 829 | Q8BHN5 | 476 | RBM45_MOUSE RNA-binding protein 45 OS=Mus mus... | 158 | 6.3 | 32 | 20 | 44 | GO:0005737; C:cytoplasm; ISS:UniProtKB.::GO:0005634; C:nucleus; ISS:UniProtKB. | | | | | | | | | | GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0003723; F:RNA binding; ISS:UniProtKB. | | | | | | | | | | GO:0030154; P:cell differentiation; IEA:UniProtKB-KW.::GO:0007399; P:nervous system development; ISS:UniProtKB. | 830 | Q7ZXB5 | 417 | RBM22_XENLA Pre-mRNA-splicing factor RBM22 OS... | 87 | 7.4 | 32 | 20 | 46 | GO:0005737; C:cytoplasm; ISS:UniProtKB.::GO:0005681; C:spliceosomal complex; IEA:UniProtKB-KW. | | | | | | | | | | GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0036002; F:pre-mRNA binding; ISS:UniProtKB.::GO:0017069; F:snRNA binding; ISS:UniProtKB.::GO:0008270; F:zinc ion binding; IEA:InterPro. | | | | | | | | | | GO:0007275; P:multicellular organismal development; IEA:UniProtKB-KW.::GO:0045292; P:nuclear mRNA cis splicing, via spliceosome; ISS:UniProtKB.::GO:0033120; P:positive regulation of RNA splicing; ISS:UniProtKB. | 831 | O14369 | 388 | SCE3_SCHPO Probable RNA-binding protein sce3 ... | 74 | 7.4 | 32 | 27 | 55 | GO:0005829; C:cytosol; IDA:PomBase.::GO:0005840; C:ribosome; ISS:PomBase. | | | | | | | | | | GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0003743; F:translation initiation factor activity; ISS:PomBase. | | | | | | | | | | GO:0002183; P:cytoplasmic translational initiation; NAS:PomBase. | 832 | Q93062 | 196 | RBPMS_HUMAN RNA-binding protein with multiple... | 186 | 8.7 | 31.2 | 26 | 38 | GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.::GO:0005634; C:nucleus; IEA:UniProtKB-SubCell. | | | | | | | | | | GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0008143; F:poly(A) RNA binding; IDA:UniProtKB.::GO:0005515; F:protein binding; IPI:UniProtKB.::GO:0003713; F:transcription coactivator activity; IDA:UniProtKB. | | | | | | | | | | GO:0010862; P:positive regulation of pathway-restricted SMAD protein phosphorylation; IDA:UniProtKB.::GO:0060391; P:positive regulation of SMAD protein import into nucleus; IDA:UniProtKB.::GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0006396; P:RNA processing; TAS:ProtInc.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW. | 833 | Q9JLI8 | 962 | SART3_MOUSE Squamous cell carcinoma antigen r... | 131 | 9.2 | 31.6 | 24 | 40 | GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.::GO:0016607; C:nuclear speck; IEA:UniProtKB-SubCell. | | | | | | | | | | GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW. | | | | | | | | | | GO:0006396; P:RNA processing; IEA:InterPro. | 834 | Q4V7D7 | 420 | RBM22_RAT Pre-mRNA-splicing factor RBM22 OS=R... | 95 | 9.6 | 31.6 | 20 | 45 | GO:0005737; C:cytoplasm; ISS:UniProtKB. | | | | | | | | | | GO:0005487; F:nucleocytoplasmic transporter activity; ISS:UniProtKB.::GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0036002; F:pre-mRNA binding; ISS:UniProtKB.::GO:0017069; F:snRNA binding; ISS:UniProtKB.::GO:0008270; F:zinc ion binding; IEA:InterPro. | | | | | | | | | | GO:0033554; P:cellular response to stress; ISS:UniProtKB.::GO:0045292; P:nuclear mRNA cis splicing, via spliceosome; ISS:UniProtKB.::GO:0090316; P:positive regulation of intracellular protein transport; ISS:UniProtKB.::GO:0033120; P:positive regulation of RNA splicing; ISS:UniProtKB. | 835 | Q92804 | 592 | RBP56_HUMAN TATA-binding protein-associated f... | 86 | 9.6 | 31.6 | 27 | 45 | GO:0005737; C:cytoplasm; IDA:UniProtKB.::GO:0005634; C:nucleus; IDA:UniProtKB. | | | | | | | | | | GO:0003677; F:DNA binding; IEA:UniProtKB-KW.::GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0005515; F:protein binding; IPI:UniProtKB.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW.::GO:0008270; F:zinc ion binding; IEA:InterPro. | | | | | | | | | | GO:0045893; P:positive regulation of transcription, DNA-dependent; TAS:UniProtKB. |
