| rec. | Subject | Hit Length | Description | Align.Len | E value | Bit score | % ident. | % pos. | GO associations |
1 | Q6FMP4 | 330 | TFB3_CANGA RNA polymerase II transcription fa... | 320 | 3e-57 | 196 | 38 | 56 | GO:0005634; C:nucleus; IEA:UniProtKB-SubCell. | | | | | | | | | | GO:0008270; F:zinc ion binding; IEA:InterPro. | | | | | | | | | | GO:0007049; P:cell cycle; IEA:InterPro.::GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW. | 2 | Q6BP96 | 340 | TFB3_DEBHA RNA polymerase II transcription fa... | 326 | 3e-56 | 193 | 36 | 58 | GO:0005634; C:nucleus; IEA:UniProtKB-SubCell. | | | | | | | | | | GO:0008270; F:zinc ion binding; IEA:InterPro. | | | | | | | | | | GO:0007049; P:cell cycle; IEA:InterPro.::GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW. | 3 | O94684 | 318 | TFB3_SCHPO RNA polymerase II transcription fa... | 308 | 4e-56 | 192 | 39 | 58 | GO:0005829; C:cytosol; IDA:PomBase.::GO:0005675; C:holo TFIIH complex; TAS:PomBase.::GO:0000112; C:nucleotide-excision repair factor 3 complex; ISS:PomBase. | | | | | | | | | | GO:0005515; F:protein binding; IPI:UniProtKB.::GO:0008270; F:zinc ion binding; IEA:InterPro. | | | | | | | | | | GO:0007049; P:cell cycle; IEA:InterPro.::GO:0006289; P:nucleotide-excision repair; ISS:PomBase.::GO:0000079; P:regulation of cyclin-dependent protein kinase activity; IGI:PomBase.::GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0006367; P:transcription initiation from RNA polymerase II promoter; IC:PomBase. | 4 | Q03290 | 321 | TFB3_YEAST RNA polymerase II transcription fa... | 310 | 2e-54 | 188 | 37 | 57 | GO:0070985; C:TFIIK complex; IDA:SGD. | | | | | | | | | | GO:0005515; F:protein binding; IPI:IntAct.::GO:0008270; F:zinc ion binding; IEA:InterPro. | | | | | | | | | | GO:0007049; P:cell cycle; IEA:InterPro.::GO:0006289; P:nucleotide-excision repair; IMP:SGD.::GO:0070816; P:phosphorylation of RNA polymerase II C-terminal domain; IDA:SGD.::GO:0006366; P:transcription from RNA polymerase II promoter; IDA:SGD. | 5 | Q6CT73 | 318 | TFB3_KLULA RNA polymerase II transcription fa... | 311 | 2e-54 | 188 | 38 | 58 | GO:0005634; C:nucleus; IEA:UniProtKB-SubCell. | | | | | | | | | | GO:0008270; F:zinc ion binding; IEA:InterPro. | | | | | | | | | | GO:0007049; P:cell cycle; IEA:InterPro.::GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW. | 6 | Q75D20 | 318 | TFB3_ASHGO RNA polymerase II transcription fa... | 311 | 6e-53 | 184 | 37 | 57 | GO:0005634; C:nucleus; IEA:UniProtKB-SubCell. | | | | | | | | | | GO:0008270; F:zinc ion binding; IEA:InterPro. | | | | | | | | | | GO:0007049; P:cell cycle; IEA:InterPro.::GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW. | 7 | Q6C7D0 | 346 | TFB3_YARLI RNA polymerase II transcription fa... | 314 | 1e-52 | 184 | 39 | 55 | GO:0005634; C:nucleus; IEA:UniProtKB-SubCell. | | | | | | | | | | GO:0008270; F:zinc ion binding; IEA:InterPro. | | | | | | | | | | GO:0007049; P:cell cycle; IEA:InterPro.::GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW. | 8 | P51951 | 309 | MAT1_XENLA CDK-activating kinase assembly fac... | 312 | 5e-50 | 176 | 34 | 54 | GO:0005634; C:nucleus; IEA:UniProtKB-SubCell. | | | | | | | | | | GO:0008270; F:zinc ion binding; IEA:InterPro. | | | | | | | | | | GO:0007049; P:cell cycle; IEA:UniProtKB-KW.::GO:0051301; P:cell division; IEA:UniProtKB-KW. | 9 | P51949 | 309 | MAT1_MOUSE CDK-activating kinase assembly fac... | 318 | 5e-49 | 173 | 36 | 55 | GO:0005675; C:holo TFIIH complex; ISS:UniProtKB. | | | | | | | | | | GO:0008270; F:zinc ion binding; IEA:InterPro. | | | | | | | | | | GO:0007512; P:adult heart development; IMP:MGI.::GO:0006915; P:apoptotic process; IMP:MGI.::GO:0044236; P:multicellular organismal metabolic process; IMP:MGI.::GO:0050790; P:regulation of catalytic activity; IMP:MGI.::GO:0051592; P:response to calcium ion; IMP:MGI.::GO:0006366; P:transcription from RNA polymerase II promoter; ISS:UniProtKB.::GO:0021591; P:ventricular system development; IMP:MGI. | 10 | P51948 | 309 | MAT1_HUMAN CDK-activating kinase assembly fac... | 318 | 3e-48 | 171 | 36 | 55 | GO:0005737; C:cytoplasm; IDA:HPA.::GO:0005675; C:holo TFIIH complex; IDA:UniProtKB. | | | | | | | | | | GO:0047485; F:protein N-terminus binding; IPI:UniProtKB.::GO:0008270; F:zinc ion binding; TAS:ProtInc. | | | | | | | | | | GO:0008283; P:cell proliferation; TAS:ProtInc.::GO:0000080; P:G1 phase of mitotic cell cycle; TAS:Reactome.::GO:0000082; P:G1/S transition of mitotic cell cycle; TAS:Reactome.::GO:0000086; P:G2/M transition of mitotic cell cycle; TAS:Reactome.::GO:0006370; P:mRNA capping; TAS:Reactome.::GO:0000718; P:nucleotide-excision repair, DNA damage removal; TAS:Reactome.::GO:0045944; P:positive regulation of transcription from RNA polymerase II promoter; IDA:UniProtKB.::GO:0050434; P:positive regulation of viral transcription; TAS:Reactome.::GO:0006461; P:protein complex assembly; TAS:ProtInc.::GO:0006468; P:protein phosphorylation; IDA:GOC.::GO:0000079; P:regulation of cyclin-dependent protein kinase activity; TAS:ProtInc.::GO:0000084; P:S phase of mitotic cell cycle; TAS:Reactome.::GO:0006363; P:termination of RNA polymerase I transcription; TAS:Reactome.::GO:0006362; P:transcription elongation from RNA polymerase I promoter; TAS:Reactome.::GO:0006368; P:transcription elongation from RNA polymerase II promoter; TAS:Reactome.::GO:0006361; P:transcription initiation from RNA polymerase I promoter; TAS:Reactome.::GO:0006367; P:transcription initiation from RNA polymerase II promoter; TAS:Reactome.::GO:0006283; P:transcription-coupled nucleotide-excision repair; TAS:Reactome.::GO:0016032; P:viral reproduction; TAS:Reactome. | 11 | P51950 | 324 | MAT1_MARGL CDK-activating kinase assembly fac... | 208 | 1e-45 | 165 | 43 | 63 | GO:0005634; C:nucleus; IEA:UniProtKB-SubCell. | | | | | | | | | | GO:0008270; F:zinc ion binding; IEA:InterPro. | | | | | | | | | | GO:0007049; P:cell cycle; IEA:UniProtKB-KW.::GO:0051301; P:cell division; IEA:UniProtKB-KW. | 12 | Q9FKW0 | 522 | RNG1A_ARATH Putative E3 ubiquitin-protein lig... | 66 | 0.001 | 44.3 | 38 | 45 | GO:0035102; C:PRC1 complex; IPI:UniProtKB. | | | | | | | | | | GO:0016874; F:ligase activity; IEA:UniProtKB-KW.::GO:0005515; F:protein binding; IPI:UniProtKB.::GO:0008270; F:zinc ion binding; IEA:InterPro. | | | | | | | | | | GO:0001709; P:cell fate determination; IMP:UniProtKB.::GO:0016568; P:chromatin modification; IEA:UniProtKB-KW.::GO:0010076; P:maintenance of floral meristem identity; IMP:UniProtKB.::GO:0010077; P:maintenance of inflorescence meristem identity; IMP:UniProtKB.::GO:0010492; P:maintenance of shoot apical meristem identity; IMP:UniProtKB.::GO:0045814; P:negative regulation of gene expression, epigenetic; IGI:UniProtKB.::GO:0045892; P:negative regulation of transcription, DNA-dependent; IGI:UniProtKB.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW. | 13 | Q60YN5 | 828 | BRE1_CAEBR E3 ubiquitin-protein ligase bre-1 ... | 45 | 0.003 | 43.1 | 38 | 53 | GO:0005634; C:nucleus; IEA:UniProtKB-SubCell. | | | | | | | | | | GO:0016874; F:ligase activity; IEA:UniProtKB-KW.::GO:0008270; F:zinc ion binding; IEA:InterPro. | | | | | | | | | | GO:0016568; P:chromatin modification; IEA:UniProtKB-KW. | 14 | Q86T96 | 592 | RN180_HUMAN E3 ubiquitin-protein ligase RNF18... | 86 | 0.006 | 42.4 | 33 | 47 | GO:0016021; C:integral to membrane; IEA:UniProtKB-KW.::GO:0005635; C:nuclear envelope; IEA:UniProtKB-SubCell. | | | | | | | | | | GO:0008270; F:zinc ion binding; IEA:InterPro. | | | | | | | | | | | 15 | P34537 | 837 | BRE1_CAEEL E3 ubiquitin-protein ligase bre-1 ... | 45 | 0.006 | 42.4 | 38 | 53 | GO:0005634; C:nucleus; IDA:UniProtKB. | | | | | | | | | | GO:0016874; F:ligase activity; IEA:UniProtKB-KW.::GO:0031624; F:ubiquitin conjugating enzyme binding; IPI:WormBase.::GO:0008270; F:zinc ion binding; IEA:InterPro. | | | | | | | | | | GO:0006915; P:apoptotic process; IMP:WormBase.::GO:0016568; P:chromatin modification; IEA:UniProtKB-KW.::GO:0009792; P:embryo development ending in birth or egg hatching; IMP:WormBase.::GO:0006664; P:glycolipid metabolic process; IMP:UniProtKB.::GO:0040007; P:growth; IMP:WormBase.::GO:0040035; P:hermaphrodite genitalia development; IMP:WormBase.::GO:0040011; P:locomotion; IMP:WormBase.::GO:0002009; P:morphogenesis of an epithelium; IMP:WormBase.::GO:0040010; P:positive regulation of growth rate; IMP:WormBase.::GO:0040025; P:vulval development; IMP:WormBase. | 16 | Q9P7E1 | 583 | YOF7_SCHPO Uncharacterized RING finger protei... | 70 | 0.008 | 42 | 34 | 46 | GO:0016020; C:membrane; IEA:UniProtKB-SubCell. | | | | | | | | | | GO:0008270; F:zinc ion binding; IEA:InterPro. | | | | | | | | | | | 17 | Q3U827 | 592 | RN180_MOUSE E3 ubiquitin-protein ligase RNF18... | 86 | 0.012 | 41.2 | 31 | 44 | GO:0016021; C:integral to membrane; IEA:UniProtKB-KW.::GO:0031227; C:intrinsic to endoplasmic reticulum membrane; IDA:MGI.::GO:0005635; C:nuclear envelope; IEA:UniProtKB-SubCell. | | | | | | | | | | GO:0031624; F:ubiquitin conjugating enzyme binding; IDA:MGI.::GO:0004842; F:ubiquitin-protein ligase activity; IDA:MGI.::GO:0008270; F:zinc ion binding; IEA:InterPro. | | | | | | | | | | GO:0032436; P:positive regulation of proteasomal ubiquitin-dependent protein catabolic process; IDA:MGI. | 18 | Q4P3X7 | 817 | BRE1_USTMA E3 ubiquitin-protein ligase BRE1 O... | 52 | 0.014 | 41.2 | 35 | 46 | GO:0005634; C:nucleus; IEA:UniProtKB-SubCell. | | | | | | | | | | GO:0016874; F:ligase activity; IEA:UniProtKB-KW.::GO:0008270; F:zinc ion binding; IEA:InterPro. | | | | | | | | | | GO:0016568; P:chromatin modification; IEA:UniProtKB-KW. | 19 | A8X679 | 434 | SIAH1_CAEBR E3 ubiquitin-protein ligase siah-... | 136 | 0.019 | 40.4 | 30 | 43 | GO:0005634; C:nucleus; IEA:InterPro. | | | | | | | | | | GO:0004842; F:ubiquitin-protein ligase activity; IEA:InterPro.::GO:0008270; F:zinc ion binding; IEA:InterPro. | | | | | | | | | | GO:0007275; P:multicellular organismal development; IEA:InterPro.::GO:0006511; P:ubiquitin-dependent protein catabolic process; IEA:InterPro. | 20 | Q5RAK3 | 592 | RN180_PONAB E3 ubiquitin-protein ligase RNF18... | 86 | 0.029 | 40 | 33 | 45 | GO:0005789; C:endoplasmic reticulum membrane; IEA:UniProtKB-SubCell.::GO:0016021; C:integral to membrane; IEA:UniProtKB-KW.::GO:0005635; C:nuclear envelope; IEA:UniProtKB-SubCell. | | | | | | | | | | GO:0016874; F:ligase activity; IEA:UniProtKB-KW.::GO:0008270; F:zinc ion binding; IEA:InterPro. | | | | | | | | | | | 21 | Q3TL54 | 445 | TR43A_MOUSE Tripartite motif-containing prote... | 87 | 0.042 | 39.3 | 29 | 52 | GO:0005622; C:intracellular; IEA:InterPro. | | | | | | | | | | GO:0008270; F:zinc ion binding; IEA:InterPro. | | | | | | | | | | | 22 | Q13049 | 653 | TRI32_HUMAN E3 ubiquitin-protein ligase TRIM3... | 70 | 0.06 | 39.3 | 30 | 54 | GO:0005634; C:nucleus; ISS:BHF-UCL. | | | | | | | | | | GO:0017022; F:myosin binding; ISS:BHF-UCL.::GO:0043621; F:protein self-association; IDA:UniProtKB.::GO:0003723; F:RNA binding; ISS:BHF-UCL.::GO:0030957; F:Tat protein binding; TAS:BHF-UCL.::GO:0003713; F:transcription coactivator activity; TAS:ProtInc.::GO:0031369; F:translation initiation factor binding; ISS:BHF-UCL.::GO:0043130; F:ubiquitin binding; IDA:UniProtKB.::GO:0004842; F:ubiquitin-protein ligase activity; IDA:UniProtKB.::GO:0008270; F:zinc ion binding; IEA:InterPro. | | | | | | | | | | GO:0045444; P:fat cell differentiation; ISS:BHF-UCL.::GO:0045087; P:innate immune response; TAS:BHF-UCL.::GO:0043066; P:negative regulation of apoptotic process; IDA:BHF-UCL.::GO:0048147; P:negative regulation of fibroblast proliferation; ISS:BHF-UCL.::GO:0045787; P:positive regulation of cell cycle; IDA:BHF-UCL.::GO:0030307; P:positive regulation of cell growth; IDA:BHF-UCL.::GO:0030335; P:positive regulation of cell migration; IDA:BHF-UCL.::GO:0050769; P:positive regulation of neurogenesis; ISS:BHF-UCL.::GO:0045666; P:positive regulation of neuron differentiation; ISS:BHF-UCL.::GO:0051092; P:positive regulation of NF-kappaB transcription factor activity; ISS:BHF-UCL.::GO:0045732; P:positive regulation of protein catabolic process; ISS:BHF-UCL.::GO:0045862; P:positive regulation of proteolysis; IDA:BHF-UCL.::GO:0000209; P:protein polyubiquitination; IDA:BHF-UCL.::GO:0042787; P:protein ubiquitination involved in ubiquitin-dependent protein catabolic process; IMP:UniProtKB.::GO:0034612; P:response to tumor necrosis factor; ISS:BHF-UCL.::GO:0009411; P:response to UV; ISS:BHF-UCL. | 23 | Q8CH72 | 655 | TRI32_MOUSE E3 ubiquitin-protein ligase TRIM3... | 70 | 0.072 | 38.9 | 30 | 54 | GO:0005737; C:cytoplasm; ISS:BHF-UCL.::GO:0005634; C:nucleus; IDA:MGI. | | | | | | | | | | GO:0017022; F:myosin binding; IPI:MGI.::GO:0043621; F:protein self-association; ISS:BHF-UCL.::GO:0003723; F:RNA binding; IDA:BHF-UCL.::GO:0031369; F:translation initiation factor binding; IPI:MGI.::GO:0043130; F:ubiquitin binding; ISS:BHF-UCL.::GO:0004842; F:ubiquitin-protein ligase activity; IDA:BHF-UCL.::GO:0008270; F:zinc ion binding; IEA:InterPro. | | | | | | | | | | GO:0045444; P:fat cell differentiation; IEP:BHF-UCL.::GO:0043066; P:negative regulation of apoptotic process; ISS:BHF-UCL.::GO:0048147; P:negative regulation of fibroblast proliferation; IEP:BHF-UCL.::GO:0045787; P:positive regulation of cell cycle; ISS:BHF-UCL.::GO:0030307; P:positive regulation of cell growth; ISS:BHF-UCL.::GO:0030335; P:positive regulation of cell migration; ISS:BHF-UCL.::GO:0050769; P:positive regulation of neurogenesis; IDA:BHF-UCL.::GO:0045666; P:positive regulation of neuron differentiation; IDA:BHF-UCL.::GO:0051092; P:positive regulation of NF-kappaB transcription factor activity; IDA:BHF-UCL.::GO:0045732; P:positive regulation of protein catabolic process; IDA:BHF-UCL.::GO:0045862; P:positive regulation of proteolysis; ISS:BHF-UCL.::GO:0000209; P:protein polyubiquitination; ISS:BHF-UCL.::GO:0042787; P:protein ubiquitination involved in ubiquitin-dependent protein catabolic process; ISS:BHF-UCL.::GO:0034612; P:response to tumor necrosis factor; IDA:BHF-UCL.::GO:0009411; P:response to UV; IDA:BHF-UCL. | 24 | Q0WX00 | 460 | RNG1B_ARATH Putative E3 ubiquitin-protein lig... | 49 | 0.076 | 38.5 | 39 | 47 | GO:0035102; C:PRC1 complex; IPI:UniProtKB. | | | | | | | | | | GO:0016874; F:ligase activity; IEA:UniProtKB-KW.::GO:0008270; F:zinc ion binding; IEA:InterPro. | | | | | | | | | | GO:0001709; P:cell fate determination; IMP:UniProtKB.::GO:0016568; P:chromatin modification; IEA:UniProtKB-KW.::GO:0010076; P:maintenance of floral meristem identity; IMP:UniProtKB.::GO:0010077; P:maintenance of inflorescence meristem identity; IMP:UniProtKB.::GO:0010492; P:maintenance of shoot apical meristem identity; IMP:UniProtKB.::GO:0045814; P:negative regulation of gene expression, epigenetic; IGI:TAIR.::GO:0045892; P:negative regulation of transcription, DNA-dependent; IGI:UniProtKB.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW. | 25 | B7K5I5 | 143 | ATPX_CYAP8 ATP synthase subunit b' OS=RF-1)).... | 75 | 0.081 | 37 | 33 | 59 | GO:0016021; C:integral to membrane; IEA:UniProtKB-KW.::GO:0045263; C:proton-transporting ATP synthase complex, coupling factor F(o); IEA:UniProtKB-KW.::GO:0042651; C:thylakoid membrane; IEA:UniProtKB-SubCell. | | | | | | | | | | GO:0015078; F:hydrogen ion transmembrane transporter activity; IEA:InterPro. | | | | | | | | | | GO:0015986; P:ATP synthesis coupled proton transport; IEA:InterPro. | 26 | P87119 | 309 | MU145_SCHPO RING finger protein mug145 OS=Sch... | 49 | 0.11 | 38.1 | 37 | 51 | GO:0016021; C:integral to membrane; IEA:UniProtKB-KW. | | | | | | | | | | GO:0008270; F:zinc ion binding; IEA:InterPro. | | | | | | | | | | GO:0007126; P:meiosis; IEA:UniProtKB-KW. | 27 | Q9D241 | 226 | RN186_MOUSE RING finger protein 186 OS=Mus mu... | 83 | 0.11 | 37.7 | 30 | 45 | GO:0016021; C:integral to membrane; IEA:UniProtKB-KW. | | | | | | | | | | GO:0008270; F:zinc ion binding; IEA:InterPro. | | | | | | | | | | | 28 | Q8IDX6 | 3130 | RBP2A_PLAF7 Reticulocyte-binding protein 2 ho... | 84 | 0.99 | 35.4 | 27 | 57 | GO:0016021; C:integral to membrane; IEA:UniProtKB-KW.::GO:0005886; C:plasma membrane; IEA:UniProtKB-SubCell. | | | | | | | | | | GO:0004872; F:receptor activity; IEA:UniProtKB-KW. | | | | | | | | | | GO:0016337; P:cell-cell adhesion; ISS:UniProtKB. | 29 | Q9FF61 | 881 | SM3L1_ARATH Putative SWI/SNF-related matrix-a... | 47 | 0.14 | 38.1 | 28 | 49 | GO:0005634; C:nucleus; IEA:UniProtKB-SubCell. | | | | | | | | | | GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0003677; F:DNA binding; IEA:InterPro.::GO:0004386; F:helicase activity; IEA:UniProtKB-KW.::GO:0008270; F:zinc ion binding; IEA:InterPro. | | | | | | | | | | GO:0016568; P:chromatin modification; IEA:UniProtKB-KW.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW. | 30 | P16091 | 264 | VCG3_NPVAC Zinc finger protein CG30 OS=Autogr... | 63 | 0.19 | 37 | 30 | 48 | | | | | | | | | | | GO:0008270; F:zinc ion binding; IEA:InterPro. | | | | | | | | | | | 31 | P87237 | 821 | YC0C_SCHPO Uncharacterized RING finger protei... | 81 | 0.19 | 37.7 | 28 | 43 | | | | | | | | | | | GO:0008270; F:zinc ion binding; IEA:InterPro. | | | | | | | | | | |
