rec. | Subject | Hit Length | Description | Align.Len | E value | Bit score | % ident. | % pos. | GO associations |
1 | O59801 | 1213 | SKI2_SCHPO Putative ATP-dependent RNA helicas... | 1204 | 0 | 1098 | 50 | 65 | GO:0005829; C:cytosol; IDA:PomBase.::GO:0005730; C:nucleolus; ISS:PomBase.::GO:0055087; C:Ski complex; ISS:PomBase. | | | | | | | | | | GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0008026; F:ATP-dependent helicase activity; IEA:InterPro.::GO:0003676; F:nucleic acid binding; IEA:InterPro.::GO:0003724; F:RNA helicase activity; ISS:PomBase. | | | | | | | | | | GO:0006402; P:mRNA catabolic process; ISS:PomBase.::GO:2000765; P:regulation of cytoplasmic translation; ISS:PomBase. | 2 | P35207 | 1287 | SKI2_YEAST Antiviral helicase SKI2 OS=Sacchar... | 1284 | 0 | 930 | 43 | 59 | GO:0055087; C:Ski complex; IDA:SGD. | | | | | | | | | | GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0008026; F:ATP-dependent helicase activity; IEA:InterPro.::GO:0003677; F:DNA binding; IEA:UniProtKB-KW.::GO:0005515; F:protein binding; IPI:IntAct.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW. | | | | | | | | | | GO:0070478; P:nuclear-transcribed mRNA catabolic process, 3'-5' exonucleolytic nonsense-mediated decay; IMP:SGD.::GO:0070481; P:nuclear-transcribed mRNA catabolic process, non-stop decay; IMP:SGD.::GO:0006417; P:regulation of translation; IEA:UniProtKB-KW.::GO:0009615; P:response to virus; IEA:UniProtKB-KW. | 3 | Q15477 | 1246 | SKIV2_HUMAN Helicase SKI2W OS=Homo sapiens (H... | 1251 | 0 | 892 | 42 | 59 | GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.::GO:0055087; C:Ski complex; IDA:UniProtKB. | | | | | | | | | | GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0004004; F:ATP-dependent RNA helicase activity; TAS:ProtInc.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW. | | | | | | | | | | | 4 | P42285 | 1042 | SK2L2_HUMAN Superkiller viralicidic activity ... | 978 | 0 | 597 | 38 | 56 | GO:0071013; C:catalytic step 2 spliceosome; IDA:UniProtKB.::GO:0005730; C:nucleolus; IEA:UniProtKB-SubCell. | | | | | | | | | | GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0008026; F:ATP-dependent helicase activity; IEA:InterPro.::GO:0003676; F:nucleic acid binding; IEA:InterPro.::GO:0005515; F:protein binding; IPI:IntAct. | | | | | | | | | | GO:0000460; P:maturation of 5.8S rRNA; IMP:UniProtKB.::GO:0000398; P:nuclear mRNA splicing, via spliceosome; IC:UniProtKB. | 5 | Q9CZU3 | 1040 | SK2L2_MOUSE Superkiller viralicidic activity ... | 978 | 0 | 596 | 38 | 56 | GO:0005730; C:nucleolus; IEA:UniProtKB-SubCell. | | | | | | | | | | GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0008026; F:ATP-dependent helicase activity; IEA:InterPro.::GO:0003676; F:nucleic acid binding; IEA:InterPro. | | | | | | | | | | GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.::GO:0008380; P:RNA splicing; IEA:UniProtKB-KW. | 6 | P47047 | 1073 | MTR4_YEAST ATP-dependent RNA helicase DOB1 OS... | 979 | 0 | 582 | 38 | 57 | GO:0005730; C:nucleolus; IDA:SGD.::GO:0031499; C:TRAMP complex; IDA:SGD. | | | | | | | | | | GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0034459; F:ATP-dependent 3'-5' RNA helicase activity; IDA:SGD.::GO:0016491; F:oxidoreductase activity; IEA:InterPro.::GO:0008143; F:poly(A) RNA binding; IDA:SGD.::GO:0005515; F:protein binding; IPI:IntAct. | | | | | | | | | | GO:0000467; P:exonucleolytic trimming to generate mature 3'-end of 5.8S rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA); IMP:SGD.::GO:0043629; P:ncRNA polyadenylation; IDA:SGD.::GO:0071042; P:nuclear polyadenylation-dependent mRNA catabolic process; IMP:SGD.::GO:0071035; P:nuclear polyadenylation-dependent rRNA catabolic process; IMP:SGD.::GO:0071038; P:nuclear polyadenylation-dependent tRNA catabolic process; IDA:SGD.::GO:0071049; P:nuclear retention of pre-mRNA with aberrant 3'-ends at the site of transcription; IGI:SGD.::GO:0071051; P:polyadenylation-dependent snoRNA 3'-end processing; IMP:SGD.::GO:0034475; P:U4 snRNA 3'-end processing; IMP:SGD.::GO:0034476; P:U5 snRNA 3'-end processing; IMP:SGD. | 7 | O14232 | 1117 | MTR4_SCHPO ATP-dependent RNA helicase mtr4 OS... | 987 | 0 | 582 | 37 | 56 | GO:0005730; C:nucleolus; ISS:PomBase.::GO:0031499; C:TRAMP complex; IDA:PomBase. | | | | | | | | | | GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0004004; F:ATP-dependent RNA helicase activity; ISS:PomBase.::GO:0003676; F:nucleic acid binding; IEA:InterPro. | | | | | | | | | | GO:0043630; P:ncRNA polyadenylation involved in polyadenylation-dependent ncRNA catabolic process; ISS:PomBase.::GO:0071049; P:nuclear retention of pre-mRNA with aberrant 3'-ends at the site of transcription; ISS:PomBase.::GO:0006364; P:rRNA processing; ISS:PomBase.::GO:0016078; P:tRNA catabolic process; ISS:PomBase. | 8 | Q23223 | 1026 | MTR4_CAEEL mRNA transport homolog 4 OS=Caenor... | 986 | 1e-177 | 558 | 37 | 55 | GO:0005634; C:nucleus; IEA:UniProtKB-SubCell. | | | | | | | | | | GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0008026; F:ATP-dependent helicase activity; IEA:InterPro.::GO:0003676; F:nucleic acid binding; IEA:InterPro. | | | | | | | | | | GO:0009792; P:embryo development ending in birth or egg hatching; IMP:WormBase.::GO:0040022; P:feminization of hermaphroditic germ-line; IMP:WormBase.::GO:0007281; P:germ cell development; IMP:WormBase.::GO:0040007; P:growth; IMP:WormBase.::GO:0040035; P:hermaphrodite genitalia development; IMP:WormBase.::GO:0040011; P:locomotion; IMP:WormBase.::GO:0002009; P:morphogenesis of an epithelium; IMP:WormBase.::GO:0002119; P:nematode larval development; IMP:WormBase.::GO:0040010; P:positive regulation of growth rate; IMP:WormBase.::GO:0042127; P:regulation of cell proliferation; IMP:WormBase.::GO:0040020; P:regulation of meiosis; IMP:WormBase. | 9 | Q10701 | 906 | HELY_MYCTU Probable helicase helY OS=Mycobact... | 224 | 0.71 | 37.7 | 21 | 41 | GO:0005618; C:cell wall; IDA:MTBBASE.::GO:0005829; C:cytosol; IDA:MTBBASE.::GO:0005886; C:plasma membrane; IDA:MTBBASE. | | | | | | | | | | GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0008026; F:ATP-dependent helicase activity; IEA:InterPro.::GO:0003676; F:nucleic acid binding; IEA:InterPro. | | | | | | | | | | | 10 | Q9ZBD8 | 920 | HELY_MYCLE Probable helicase helY OS=Mycobact... | 157 | 0.076 | 41.2 | 22 | 46 | | | | | | | | | | | GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0008026; F:ATP-dependent helicase activity; IEA:InterPro.::GO:0003676; F:nucleic acid binding; IEA:InterPro. | | | | | | | | | | | 11 | O13799 | 1030 | YE02_SCHPO Uncharacterized helicase C17H9.02 ... | 227 | 4e-64 | 240 | 51 | 69 | GO:0005730; C:nucleolus; ISS:PomBase.::GO:0031499; C:TRAMP complex; ISS:PomBase. | | | | | | | | | | GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0004004; F:ATP-dependent RNA helicase activity; ISS:PomBase.::GO:0003676; F:nucleic acid binding; IEA:InterPro. | | | | | | | | | | GO:0043630; P:ncRNA polyadenylation involved in polyadenylation-dependent ncRNA catabolic process; ISS:PomBase.::GO:0071049; P:nuclear retention of pre-mRNA with aberrant 3'-ends at the site of transcription; ISS:PomBase.::GO:0006364; P:rRNA processing; ISS:PomBase.::GO:0016078; P:tRNA catabolic process; ISS:PomBase. | 12 | B9DFG3 | 1171 | ISE2_ARATH DEAD-box ATP-dependent RNA helicas... | 544 | 1e-82 | 298 | 36 | 52 | GO:0009570; C:chloroplast stroma; IDA:TAIR.::GO:0010494; C:cytoplasmic stress granule; IDA:TAIR. | | | | | | | | | | GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0008026; F:ATP-dependent helicase activity; IEA:InterPro.::GO:0003676; F:nucleic acid binding; IEA:InterPro. | | | | | | | | | | GO:0009793; P:embryo development ending in seed dormancy; IMP:TAIR.::GO:0031047; P:gene silencing by RNA; IEA:UniProtKB-KW.::GO:0010497; P:plasmodesmata-mediated intercellular transport; IMP:TAIR.::GO:0016441; P:posttranscriptional gene silencing; IMP:TAIR. | 13 | Q974S1 | 704 | HELS_SULTO Putative ski2-type helicase OS=Sul... | 435 | 1e-27 | 124 | 27 | 45 | | | | | | | | | | | GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0008026; F:ATP-dependent helicase activity; IEA:InterPro.::GO:0003677; F:DNA binding; IEA:InterPro. | | | | | | | | | | GO:0006281; P:DNA repair; IEA:InterPro. | 14 | A6UN73 | 751 | HELS_METVS Putative ski2-type helicase OS=Met... | 437 | 3e-21 | 103 | 24 | 45 | | | | | | | | | | | GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0008026; F:ATP-dependent helicase activity; IEA:InterPro.::GO:0003677; F:DNA binding; IEA:InterPro. | | | | | | | | | | GO:0006281; P:DNA repair; IEA:InterPro. | 15 | P51979 | 1187 | HFM1_YEAST ATP-dependent DNA helicase MER3 OS... | 476 | 1e-19 | 99.4 | 23 | 40 | GO:0005634; C:nucleus; IDA:SGD. | | | | | | | | | | GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0008026; F:ATP-dependent helicase activity; IEA:InterPro.::GO:0003677; F:DNA binding; IEA:UniProtKB-KW.::GO:0003678; F:DNA helicase activity; IDA:SGD.::GO:0046872; F:metal ion binding; IEA:UniProtKB-KW. | | | | | | | | | | GO:0006268; P:DNA unwinding involved in replication; IDA:SGD.::GO:0007131; P:reciprocal meiotic recombination; IMP:SGD.::GO:0007129; P:synapsis; IMP:SGD. | 16 | Q97VY9 | 708 | HELS_SULSO Putative ski2-type helicase OS=P2)... | 182 | 2e-17 | 91.3 | 34 | 53 | | | | | | | | | | | GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0008026; F:ATP-dependent helicase activity; IEA:InterPro.::GO:0003677; F:DNA binding; IEA:InterPro. | | | | | | | | | | GO:0006281; P:DNA repair; IEA:InterPro. | 17 | Q5H9U9 | 1706 | DDX6L_HUMAN Probable ATP-dependent RNA helica... | 176 | 0.00009 | 50.8 | 25 | 45 | | | | | | | | | | | GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0008026; F:ATP-dependent helicase activity; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW. | | | | | | | | | | | 18 | Q9YFQ8 | 735 | HELS_AERPE Putative ski2-type helicase OS=100... | 150 | 6e-17 | 90.1 | 37 | 57 | | | | | | | | | | | GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0008026; F:ATP-dependent helicase activity; IEA:InterPro.::GO:0003677; F:DNA binding; IEA:InterPro. | | | | | | | | | | GO:0006281; P:DNA repair; IEA:InterPro. | 19 | Q9V0A9 | 715 | HELS_PYRAB Putative ski2-type helicase OS=Pyr... | 175 | 0.000000003 | 65.1 | 29 | 46 | | | | | | | | | | | GO:0005524; F:ATP binding; IEA:HAMAP.::GO:0008026; F:ATP-dependent helicase activity; IEA:InterPro.::GO:0003677; F:DNA binding; IEA:HAMAP. | | | | | | | | | | GO:0006281; P:DNA repair; IEA:InterPro. | 20 | Q09475 | 1714 | YP93_CAEEL Uncharacterized helicase C28H8.3 O... | 198 | 0.000000000008 | 73.9 | 27 | 48 | GO:0005634; C:nucleus; IEA:UniProtKB-SubCell. | | | | | | | | | | GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0008026; F:ATP-dependent helicase activity; IEA:InterPro.::GO:0003676; F:nucleic acid binding; IEA:InterPro. | | | | | | | | | | | 21 | O59025 | 715 | HELS_PYRHO Putative ski2-type helicase OS=NBR... | 175 | 0.0000000004 | 67.8 | 29 | 46 | | | | | | | | | | | GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0008026; F:ATP-dependent helicase activity; IEA:InterPro.::GO:0003677; F:DNA binding; IEA:InterPro. | | | | | | | | | | GO:0006281; P:DNA repair; IEA:InterPro. | 22 | Q4JC00 | 705 | HELS_SULAC Putative ski2-type helicase OS=NBR... | 187 | 0.00000000000005 | 80.5 | 33 | 51 | | | | | | | | | | | GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0008026; F:ATP-dependent helicase activity; IEA:InterPro.::GO:0003677; F:DNA binding; IEA:InterPro. | | | | | | | | | | GO:0006281; P:DNA repair; IEA:InterPro. | 23 | Q9P7T8 | 1717 | YIW2_SCHPO Uncharacterized helicase C694.02 O... | 130 | 0.00000000000005 | 80.9 | 39 | 55 | GO:0005829; C:cytosol; IDA:PomBase.::GO:0005634; C:nucleus; IEA:UniProtKB-SubCell. | | | | | | | | | | GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0008026; F:ATP-dependent helicase activity; IEA:InterPro.::GO:0003676; F:nucleic acid binding; IEA:InterPro. | | | | | | | | | | | 24 | O75643 | 2136 | U520_HUMAN U5 small nuclear ribonucleoprotein... | 202 | 0.00000006 | 61.2 | 29 | 48 | GO:0071013; C:catalytic step 2 spliceosome; IDA:UniProtKB.::GO:0005654; C:nucleoplasm; TAS:Reactome.::GO:0005682; C:U5 snRNP; IDA:HGNC. | | | | | | | | | | GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0008026; F:ATP-dependent helicase activity; IDA:HGNC.::GO:0003676; F:nucleic acid binding; IEA:InterPro. | | | | | | | | | | GO:0000354; P:cis assembly of pre-catalytic spliceosome; IC:HGNC. | 25 | Q5JGV6 | 1125 | HELS_PYRKO Putative ski2-type helicase OS=(Th... | 98 | 0.47 | 38.5 | 27 | 49 | | | | | | | | | | | GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0008026; F:ATP-dependent helicase activity; IEA:InterPro.::GO:0003677; F:DNA binding; IEA:InterPro.::GO:0004519; F:endonuclease activity; IEA:UniProtKB-KW. | | | | | | | | | | GO:0006281; P:DNA repair; IEA:InterPro.::GO:0016539; P:intein-mediated protein splicing; IEA:InterPro.::GO:0006314; P:intron homing; IEA:UniProtKB-KW. | 26 | A7IB61 | 723 | HELS_METB6 Putative ski2-type helicase OS=Met... | 160 | 0.000000002 | 65.5 | 29 | 49 | | | | | | | | | | | GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0008026; F:ATP-dependent helicase activity; IEA:InterPro.::GO:0003676; F:nucleic acid binding; IEA:InterPro. | | | | | | | | | | | 27 | Q55CI8 | 2237 | HELCL_DICDI Activating signal cointegrator 1 ... | 120 | 0.00007 | 51.2 | 30 | 51 | GO:0005681; C:spliceosomal complex; ISS:dictyBase. | | | | | | | | | | GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0004004; F:ATP-dependent RNA helicase activity; ISS:dictyBase.::GO:0003676; F:nucleic acid binding; IEA:InterPro. | | | | | | | | | | GO:0008380; P:RNA splicing; ISS:dictyBase. | 28 | Q8IY21 | 1712 | DDX60_HUMAN Probable ATP-dependent RNA helica... | 175 | 0.00000004 | 62 | 26 | 49 | GO:0005737; C:cytoplasm; IDA:UniProtKB. | | | | | | | | | | GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0008026; F:ATP-dependent helicase activity; IEA:InterPro.::GO:0003690; F:double-stranded DNA binding; IDA:UniProtKB.::GO:0003725; F:double-stranded RNA binding; IDA:UniProtKB.::GO:0005515; F:protein binding; IPI:UniProtKB.::GO:0003727; F:single-stranded RNA binding; IDA:UniProtKB. | | | | | | | | | | GO:1900245; P:positive regulation of MDA-5 signaling pathway; IMP:UniProtKB.::GO:1900246; P:positive regulation of RIG-I signaling pathway; IMP:UniProtKB.::GO:0009615; P:response to virus; IDA:UniProtKB. | 29 | A8MB76 | 756 | HELS_CALMQ Putative ski2-type helicase OS=/ I... | 180 | 0.00000000002 | 72 | 29 | 52 | | | | | | | | | | | GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0008026; F:ATP-dependent helicase activity; IEA:InterPro.::GO:0003677; F:DNA binding; IEA:InterPro. | | | | | | | | | | GO:0006281; P:DNA repair; IEA:InterPro. | 30 | Q9HJX7 | 674 | HELS_THEAC Putative ski2-type helicase OS=NBR... | 151 | 0.00000000005 | 70.9 | 31 | 48 | | | | | | | | | | | GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0008026; F:ATP-dependent helicase activity; IEA:InterPro.::GO:0003677; F:DNA binding; IEA:InterPro. | | | | | | | | | | GO:0006281; P:DNA repair; IEA:InterPro. | 31 | Q12WZ6 | 760 | HELS_METBU Putative ski2-type helicase OS=Met... | 150 | 0.0000000007 | 67.4 | 28 | 53 | | | | | | | | | | | GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0008026; F:ATP-dependent helicase activity; IEA:InterPro.::GO:0003677; F:DNA binding; IEA:InterPro. | | | | | | | | | | GO:0006281; P:DNA repair; IEA:InterPro. |