rec. | Subject | Hit Length | Description | Align.Len | E value | Bit score | % ident. | % pos. | GO associations |
301 | Q9XSR3 | 592 | RBM47_CANFA RNA-binding protein 47 OS=Canis f... | 296 | 0.69 | 36.6 | 22 | 36 | GO:0005634; C:nucleus; IEA:UniProtKB-SubCell. | | | | | | | | | | GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW. | | | | | | | | | | | 302 | A4IIM2 | 513 | CELF2_XENTR CUGBP Elav-like family member 2 O... | 90 | 0.7 | 36.6 | 34 | 46 | GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.::GO:0005634; C:nucleus; IEA:UniProtKB-SubCell. | | | | | | | | | | GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW. | | | | | | | | | | GO:0006397; P:mRNA processing; IEA:UniProtKB-KW. | 303 | Q7LL14 | 111 | RU2B_SCHPO Probable U2 small nuclear ribonucl... | 103 | 0.73 | 34.3 | 24 | 47 | GO:0005829; C:cytosol; IDA:PomBase.::GO:0005681; C:spliceosomal complex; NAS:PomBase.::GO:0005686; C:U2 snRNP; ISS:PomBase. | | | | | | | | | | GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0030620; F:U2 snRNA binding; ISS:PomBase. | | | | | | | | | | GO:0045292; P:nuclear mRNA cis splicing, via spliceosome; ISS:PomBase. | 304 | Q44560 | 102 | RBPA_NOSS1 Putative RNA-binding protein rbpA ... | 85 | 0.74 | 33.9 | 29 | 49 | | | | | | | | | | | GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW. | | | | | | | | | | | 305 | Q9I8B3 | 224 | RB24B_XENLA RNA-binding protein 24-B OS=Xenop... | 64 | 0.76 | 35.8 | 33 | 48 | GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.::GO:0005634; C:nucleus; IEA:UniProtKB-SubCell. | | | | | | | | | | GO:0003730; F:mRNA 3'-UTR binding; ISS:UniProtKB.::GO:0000166; F:nucleotide binding; IEA:InterPro. | | | | | | | | | | GO:0030154; P:cell differentiation; IEA:UniProtKB-KW.::GO:0043488; P:regulation of mRNA stability; ISS:UniProtKB.::GO:0010830; P:regulation of myotube differentiation; ISS:UniProtKB. | 306 | Q6DID3 | 1268 | SCAF8_MOUSE Protein SCAF8 OS=Mus musculus (Mo... | 97 | 0.78 | 36.6 | 26 | 47 | GO:0016363; C:nuclear matrix; ISS:UniProtKB.::GO:0005681; C:spliceosomal complex; IEA:UniProtKB-KW. | | | | | | | | | | GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW. | | | | | | | | | | GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.::GO:0008380; P:RNA splicing; IEA:UniProtKB-KW. | 307 | Q6GQD3 | 225 | RB24A_XENLA RNA-binding protein 24-A OS=Xenop... | 64 | 0.82 | 35.4 | 33 | 48 | GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.::GO:0005634; C:nucleus; IEA:UniProtKB-SubCell. | | | | | | | | | | GO:0003730; F:mRNA 3'-UTR binding; ISS:UniProtKB.::GO:0000166; F:nucleotide binding; IEA:InterPro. | | | | | | | | | | GO:0030154; P:cell differentiation; IEA:UniProtKB-KW.::GO:0043488; P:regulation of mRNA stability; ISS:UniProtKB.::GO:0010830; P:regulation of myotube differentiation; IMP:UniProtKB. | 308 | Q15415 | 496 | RBY1F_HUMAN RNA-binding motif protein, Y chro... | 101 | 0.82 | 36.2 | 25 | 44 | GO:0005634; C:nucleus; IEA:UniProtKB-SubCell. | | | | | | | | | | GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0003723; F:RNA binding; NAS:UniProtKB. | | | | | | | | | | GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.::GO:0008380; P:RNA splicing; IEA:UniProtKB-KW.::GO:0007283; P:spermatogenesis; NAS:UniProtKB. | 309 | P51990 | 358 | RO22_XENLA Heterogeneous nuclear ribonucleopr... | 152 | 0.83 | 36.2 | 24 | 45 | GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.::GO:0030529; C:ribonucleoprotein complex; IEA:UniProtKB-KW. | | | | | | | | | | GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW. | | | | | | | | | | | 310 | Q30ZX3 | 904 | MUTS_DESDG DNA mismatch repair protein MutS O... | 103 | 0.84 | 36.6 | 29 | 49 | | | | | | | | | | | GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0030983; F:mismatched DNA binding; IEA:InterPro. | | | | | | | | | | GO:0006298; P:mismatch repair; IEA:InterPro. | 311 | P49792 | 3224 | RBP2_HUMAN E3 SUMO-protein ligase RanBP2 OS=H... | 207 | 0.91 | 36.6 | 24 | 34 | GO:0005829; C:cytosol; TAS:Reactome.::GO:0005643; C:nuclear pore; IDA:UniProtKB. | | | | | | | | | | GO:0003755; F:peptidyl-prolyl cis-trans isomerase activity; IEA:UniProtKB-KW.::GO:0008536; F:Ran GTPase binding; TAS:ProtInc.::GO:0008270; F:zinc ion binding; IEA:InterPro. | | | | | | | | | | GO:0005975; P:carbohydrate metabolic process; TAS:Reactome.::GO:0019221; P:cytokine-mediated signaling pathway; TAS:Reactome.::GO:0015758; P:glucose transport; TAS:Reactome.::GO:0000236; P:mitotic prometaphase; TAS:Reactome.::GO:0051028; P:mRNA transport; IEA:UniProtKB-KW.::GO:0006457; P:protein folding; IEA:UniProtKB-KW.::GO:0006606; P:protein import into nucleus; TAS:ProtInc.::GO:0016925; P:protein sumoylation; IDA:UniProtKB.::GO:0010827; P:regulation of glucose transport; TAS:Reactome.::GO:0044281; P:small molecule metabolic process; TAS:Reactome.::GO:0055085; P:transmembrane transport; TAS:Reactome.::GO:0016032; P:viral reproduction; TAS:Reactome. | 312 | Q6P8A7 | 226 | RBM24_XENTR RNA-binding protein 24 OS=Xenopus... | 64 | 0.99 | 35.4 | 33 | 48 | GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.::GO:0005634; C:nucleus; IEA:UniProtKB-SubCell. | | | | | | | | | | GO:0003730; F:mRNA 3'-UTR binding; ISS:UniProtKB.::GO:0000166; F:nucleotide binding; IEA:InterPro. | | | | | | | | | | GO:0030154; P:cell differentiation; IEA:UniProtKB-KW.::GO:0043488; P:regulation of mRNA stability; ISS:UniProtKB.::GO:0010830; P:regulation of myotube differentiation; ISS:UniProtKB. | 313 | Q96E39 | 390 | RMXL1_HUMAN RNA binding motif protein, X-link... | 83 | 0.99 | 35.8 | 29 | 46 | GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.::GO:0030529; C:ribonucleoprotein complex; IEA:UniProtKB-KW. | | | | | | | | | | GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW. | | | | | | | | | | GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.::GO:0008380; P:RNA splicing; IEA:UniProtKB-KW. | 314 | P19684 | 324 | ROC5_NICSY 33 kDa ribonucleoprotein, chloropl... | 84 | 2.5 | 34.7 | 29 | 48 | GO:0009507; C:chloroplast; IEA:UniProtKB-SubCell.::GO:0030529; C:ribonucleoprotein complex; IEA:UniProtKB-KW. | | | | | | | | | | GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW. | | | | | | | | | | GO:0006397; P:mRNA processing; IEA:UniProtKB-KW. | 315 | Q7T3I7 | 214 | RBM38_XENLA RNA-binding protein 38 OS=Xenopus... | 65 | 1 | 35.4 | 32 | 48 | GO:0005829; C:cytosol; IEA:UniProtKB-SubCell.::GO:0005634; C:nucleus; IEA:UniProtKB-SubCell. | | | | | | | | | | GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW. | | | | | | | | | | GO:0030154; P:cell differentiation; IEA:UniProtKB-KW.::GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.::GO:0007275; P:multicellular organismal development; IEA:UniProtKB-KW.::GO:0008380; P:RNA splicing; IEA:UniProtKB-KW. | 316 | Q9LEB3 | 428 | RBP47_NICPL Polyadenylate-binding protein RBP... | 96 | 9.4 | 32.7 | 27 | 47 | GO:0010494; C:cytoplasmic stress granule; IDA:UniProtKB.::GO:0005634; C:nucleus; IDA:UniProtKB. | | | | | | | | | | GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0008143; F:poly(A) RNA binding; IDA:UniProtKB. | | | | | | | | | | GO:0034605; P:cellular response to heat; IDA:UniProtKB.::GO:0006397; P:mRNA processing; IEA:UniProtKB-KW. | 317 | P07909 | 365 | ROA1_DROME Heterogeneous nuclear ribonucleopr... | 192 | 1 | 35.8 | 24 | 42 | GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.::GO:0005703; C:polytene chromosome puff; IDA:FlyBase.::GO:0030529; C:ribonucleoprotein complex; IDA:FlyBase. | | | | | | | | | | GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW.::GO:0043565; F:sequence-specific DNA binding; IDA:FlyBase. | | | | | | | | | | GO:0033119; P:negative regulation of RNA splicing; IMP:FlyBase.::GO:0000381; P:regulation of alternative nuclear mRNA splicing, via spliceosome; IMP:FlyBase. | 318 | Q03878 | 157 | GRP1_DAUCA Glycine-rich RNA-binding protein O... | 72 | 1.1 | 34.7 | 31 | 53 | | | | | | | | | | | GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW. | | | | | | | | | | | 319 | Q9BX46 | 236 | RBM24_HUMAN RNA-binding protein 24 OS=Homo sa... | 64 | 1.2 | 35 | 33 | 48 | GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.::GO:0005634; C:nucleus; IEA:UniProtKB-SubCell. | | | | | | | | | | GO:0003730; F:mRNA 3'-UTR binding; ISS:UniProtKB.::GO:0000166; F:nucleotide binding; IEA:InterPro. | | | | | | | | | | GO:0030154; P:cell differentiation; IEA:UniProtKB-KW.::GO:0043488; P:regulation of mRNA stability; ISS:UniProtKB.::GO:0010830; P:regulation of myotube differentiation; ISS:UniProtKB. | 320 | Q9Z301 | 1257 | PER2_RAT Period circadian protein homolog 2 O... | 96 | 1.2 | 36.2 | 35 | 48 | GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.::GO:0005634; C:nucleus; IDA:RGD. | | | | | | | | | | GO:0005515; F:protein binding; IPI:UniProtKB.::GO:0000988; F:protein binding transcription factor activity; IDA:BHF-UCL.::GO:0004871; F:signal transducer activity; IEA:InterPro. | | | | | | | | | | GO:0007623; P:circadian rhythm; IEP:UniProtKB.::GO:0000122; P:negative regulation of transcription from RNA polymerase II promoter; IDA:BHF-UCL.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW. | 321 | Q7JGR2 | 382 | PABP5_MACMU Polyadenylate-binding protein 5 O... | 141 | 5.3 | 33.5 | 28 | 45 | GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell. | | | | | | | | | | GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW. | | | | | | | | | | | 322 | Q6CDH3 | 629 | PABP_YARLI Polyadenylate-binding protein, cyt... | 141 | 1.2 | 35.8 | 22 | 47 | GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.::GO:0005634; C:nucleus; IEA:UniProtKB-SubCell. | | | | | | | | | | GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW. | | | | | | | | | | GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.::GO:0051028; P:mRNA transport; IEA:UniProtKB-KW.::GO:0006417; P:regulation of translation; IEA:UniProtKB-KW. | 323 | P38922 | 454 | HRB1_YEAST Protein HRB1 OS=Saccharomyces cere... | 193 | 1.2 | 35.8 | 23 | 41 | GO:0005737; C:cytoplasm; IDA:SGD.::GO:0030530; C:heterogeneous nuclear ribonucleoprotein complex; NAS:SGD. | | | | | | | | | | GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0003723; F:RNA binding; IDA:SGD. | | | | | | | | | | GO:0016973; P:poly(A)+ mRNA export from nucleus; IPI:SGD. | 324 | P0DJD3 | 496 | RBY1A_HUMAN RNA-binding motif protein, Y chro... | 101 | 1.3 | 35.4 | 25 | 43 | GO:0005634; C:nucleus; IEA:UniProtKB-SubCell. | | | | | | | | | | GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW. | | | | | | | | | | GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.::GO:0008380; P:RNA splicing; IEA:UniProtKB-KW. | 325 | A6NEQ0 | 496 | RBY1E_HUMAN RNA-binding motif protein, Y chro... | 101 | 1.3 | 35.4 | 25 | 43 | GO:0005634; C:nucleus; IEA:UniProtKB-SubCell. | | | | | | | | | | GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW. | | | | | | | | | | GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.::GO:0008380; P:RNA splicing; IEA:UniProtKB-KW. | 326 | P0C7P1 | 496 | RBY1D_HUMAN RNA-binding motif protein, Y chro... | 101 | 1.3 | 35.4 | 25 | 43 | GO:0005634; C:nucleus; IEA:UniProtKB-SubCell. | | | | | | | | | | GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW. | | | | | | | | | | GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.::GO:0008380; P:RNA splicing; IEA:UniProtKB-KW. | 327 | O75526 | 392 | RMXL2_HUMAN RNA-binding motif protein, X-link... | 81 | 1.4 | 35.4 | 26 | 47 | GO:0005634; C:nucleus; IDA:HPA.::GO:0030529; C:ribonucleoprotein complex; IEA:UniProtKB-KW. | | | | | | | | | | GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW. | | | | | | | | | | | 328 | Q10MR0 | 232 | RU2B_ORYSJ U2 small nuclear ribonucleoprotein... | 90 | 1.4 | 35 | 24 | 48 | GO:0015030; C:Cajal body; ISS:UniProtKB.::GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.::GO:0005681; C:spliceosomal complex; IEA:UniProtKB-KW.::GO:0005686; C:U2 snRNP; ISS:UniProtKB. | | | | | | | | | | GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0017069; F:snRNA binding; IEA:InterPro. | | | | | | | | | | GO:0000398; P:nuclear mRNA splicing, via spliceosome; IEA:InterPro. | 329 | P39684 | 611 | PES4_YEAST Protein PES4 OS=Saccharomyces cere... | 162 | 1.4 | 35.4 | 24 | 43 | GO:0005634; C:nucleus; IEA:UniProtKB-SubCell. | | | | | | | | | | GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW. | | | | | | | | | | | 330 | A6NDE4 | 496 | RBY1B_HUMAN RNA-binding motif protein, Y chro... | 101 | 1.4 | 35.4 | 25 | 43 | GO:0005634; C:nucleus; TAS:UniProtKB. | | | | | | | | | | GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0005515; F:protein binding; IPI:UniProtKB.::GO:0003723; F:RNA binding; NAS:UniProtKB. | | | | | | | | | | GO:0008584; P:male gonad development; IMP:UniProtKB.::GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.::GO:0008380; P:RNA splicing; IDA:UniProtKB.::GO:0007283; P:spermatogenesis; TAS:UniProtKB. | 331 | Q2R0Q1 | 574 | U2A2A_ORYSJ Splicing factor U2af large subuni... | 99 | 1.5 | 35.4 | 26 | 42 | GO:0005634; C:nucleus; IEA:UniProtKB-SubCell. | | | | | | | | | | GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW. | | | | | | | | | | GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.::GO:0008380; P:RNA splicing; IEA:UniProtKB-KW. |