rec. | Subject | Hit Length | Description | Align.Len | E value | Bit score | % ident. | % pos. | GO associations |
31 | Q96T58 | 3664 | MINT_HUMAN Msx2-interacting protein OS=Homo s... | 68 | 0.009 | 42 | 35 | 54 | GO:0017053; C:transcriptional repressor complex; IDA:BHF-UCL. | | | | | | | | | | GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW.::GO:0001085; F:RNA polymerase II transcription factor binding; IPI:BHF-UCL.::GO:0001191; F:RNA polymerase II transcription factor binding transcription factor activity involved in negative regulation of transcription; IDA:BHF-UCL. | | | | | | | | | | GO:0044419; P:interspecies interaction between organisms; IEA:UniProtKB-KW.::GO:0007219; P:Notch signaling pathway; IEA:UniProtKB-KW.::GO:0050769; P:positive regulation of neurogenesis; IMP:BHF-UCL. | 32 | Q8LPQ9 | 901 | FPA_ARATH Flowering time control protein FPA ... | 73 | 0.014 | 41.2 | 36 | 52 | GO:0000785; C:chromatin; IDA:TAIR.::GO:0005634; C:nucleus; IEA:UniProtKB-SubCell. | | | | | | | | | | GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW. | | | | | | | | | | GO:0030154; P:cell differentiation; IEA:UniProtKB-KW.::GO:0031048; P:chromatin silencing by small RNA; IMP:TAIR.::GO:0009790; P:embryo development; IGI:TAIR.::GO:0009553; P:embryo sac development; IGI:TAIR.::GO:0009908; P:flower development; IEA:UniProtKB-KW.::GO:0006378; P:mRNA polyadenylation; IDA:UniProtKB.::GO:0009911; P:positive regulation of flower development; IMP:TAIR.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0010228; P:vegetative to reproductive phase transition of meristem; IMP:TAIR. | 33 | P53883 | 403 | NOP13_YEAST Nucleolar protein 13 OS=Saccharom... | 138 | 0.044 | 39.3 | 24 | 44 | GO:0005730; C:nucleolus; IDA:SGD.::GO:0030684; C:preribosome; IDA:SGD. | | | | | | | | | | GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW. | | | | | | | | | | | 34 | O13674 | 654 | MUG24_SCHPO Meiotically up-regulated gene 24 ... | 63 | 0.37 | 36.6 | 27 | 54 | GO:0005829; C:cytosol; IDA:PomBase. | | | | | | | | | | GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW. | | | | | | | | | | GO:0007126; P:meiosis; IEA:UniProtKB-KW. | 35 | Q08925 | 612 | MRN1_YEAST RNA-binding protein MRN1 OS=Saccha... | 54 | 3.5 | 33.5 | 28 | 61 | GO:0005737; C:cytoplasm; IDA:SGD. | | | | | | | | | | GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW. | | | | | | | | | | GO:0006417; P:regulation of translation; IEA:UniProtKB-KW. | 36 | Q93W34 | 415 | RP45C_ARATH Polyadenylate-binding protein RBP... | 110 | 0.59 | 35.8 | 22 | 43 | GO:0005634; C:nucleus; ISS:UniProtKB. | | | | | | | | | | GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0008143; F:poly(A) RNA binding; ISS:UniProtKB. | | | | | | | | | | GO:0006397; P:mRNA processing; IEA:UniProtKB-KW. | 37 | P32588 | 453 | PUB1_YEAST Nuclear and cytoplasmic polyadenyl... | 84 | 1.3 | 34.7 | 25 | 52 | GO:0010494; C:cytoplasmic stress granule; IDA:SGD.::GO:0030530; C:heterogeneous nuclear ribonucleoprotein complex; IDA:SGD. | | | | | | | | | | GO:0003729; F:mRNA binding; IDA:SGD.::GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0008266; F:poly(U) RNA binding; IDA:SGD.::GO:0005515; F:protein binding; IPI:IntAct. | | | | | | | | | | GO:0000184; P:nuclear-transcribed mRNA catabolic process, nonsense-mediated decay; IDA:SGD.::GO:0043488; P:regulation of mRNA stability; IMP:SGD.::GO:0034063; P:stress granule assembly; IMP:SGD. | 38 | Q9DD48 | 423 | MKRN2_SERQU Probable E3 ubiquitin-protein lig... | 36 | 1.5 | 34.7 | 42 | 56 | | | | | | | | | | | GO:0016874; F:ligase activity; IEA:UniProtKB-KW.::GO:0003676; F:nucleic acid binding; IEA:InterPro.::GO:0008270; F:zinc ion binding; IEA:InterPro. | | | | | | | | | | GO:0030154; P:cell differentiation; IEA:UniProtKB-KW.::GO:0007399; P:nervous system development; IEA:UniProtKB-KW.::GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW. | 39 | A9ADV3 | 107 | IHFB_BURM1 Integration host factor subunit be... | 70 | 1.9 | 32.3 | 30 | 49 | GO:0005694; C:chromosome; IEA:InterPro. | | | | | | | | | | GO:0003677; F:DNA binding; IEA:UniProtKB-KW. | | | | | | | | | | GO:0006310; P:DNA recombination; IEA:UniProtKB-KW.::GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0006417; P:regulation of translation; IEA:UniProtKB-KW.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW. | 40 | Q68EV1 | 308 | CD276_XENLA CD276 antigen homolog OS=Xenopus ... | 82 | 2.4 | 33.5 | 27 | 44 | GO:0016021; C:integral to membrane; IEA:UniProtKB-KW. | | | | | | | | | | | | | | | | | | | | | 41 | Q5Z807 | 390 | C3H46_ORYSJ Zinc finger CCCH domain-containin... | 23 | 2.6 | 33.9 | 52 | 61 | | | | | | | | | | | GO:0003677; F:DNA binding; IEA:UniProtKB-KW.::GO:0008270; F:zinc ion binding; IEA:InterPro. | | | | | | | | | | | 42 | Q9UPN6 | 1271 | SCAF8_HUMAN Protein SCAF8 OS=Homo sapiens (Hu... | 76 | 3.2 | 33.9 | 26 | 53 | GO:0016363; C:nuclear matrix; ISS:UniProtKB.::GO:0005681; C:spliceosomal complex; IEA:UniProtKB-KW. | | | | | | | | | | GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW.::GO:0043175; F:RNA polymerase core enzyme binding; IPI:UniProtKB. | | | | | | | | | | GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.::GO:0008380; P:RNA splicing; IEA:UniProtKB-KW. | 43 | P70318 | 392 | TIAR_MOUSE Nucleolysin TIAR OS=Mus musculus (... | 90 | 3.5 | 33.5 | 24 | 48 | GO:0010494; C:cytoplasmic stress granule; IDA:UniProtKB.::GO:0005634; C:nucleus; IDA:UniProtKB. | | | | | | | | | | GO:0017091; F:AU-rich element binding; IDA:MGI.::GO:0000166; F:nucleotide binding; IEA:InterPro. | | | | | | | | | | GO:0006915; P:apoptotic process; IEA:UniProtKB-KW.::GO:0007281; P:germ cell development; IMP:MGI.::GO:0008284; P:positive regulation of cell proliferation; IMP:MGI.::GO:0017145; P:stem cell division; IMP:MGI. | 44 | Q01085 | 375 | TIAR_HUMAN Nucleolysin TIAR OS=Homo sapiens (... | 90 | 3.5 | 33.1 | 24 | 48 | GO:0010494; C:cytoplasmic stress granule; ISS:UniProtKB.::GO:0005764; C:lysosome; TAS:ProtInc.::GO:0005634; C:nucleus; ISS:UniProtKB. | | | | | | | | | | GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0003723; F:RNA binding; TAS:ProtInc. | | | | | | | | | | GO:0006915; P:apoptotic process; IEA:UniProtKB-KW.::GO:0006952; P:defense response; TAS:ProtInc.::GO:0006917; P:induction of apoptosis; TAS:ProtInc.::GO:0006357; P:regulation of transcription from RNA polymerase II promoter; TAS:ProtInc. | 45 | Q4WKD9 | 254 | YTH1_ASPFU mRNA 3'-end-processing protein yth... | 158 | 4.3 | 32.7 | 26 | 38 | GO:0005634; C:nucleus; IEA:UniProtKB-SubCell. | | | | | | | | | | GO:0003723; F:RNA binding; IEA:UniProtKB-KW.::GO:0008270; F:zinc ion binding; IEA:InterPro. | | | | | | | | | | GO:0006397; P:mRNA processing; IEA:UniProtKB-KW. | 46 | P38741 | 713 | RIM4_YEAST Meiotic activator RIM4 OS=Saccharo... | 62 | 4.7 | 33.1 | 31 | 53 | GO:0005737; C:cytoplasm; IDA:SGD. | | | | | | | | | | GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0003723; F:RNA binding; IMP:SGD. | | | | | | | | | | GO:0006279; P:premeiotic DNA replication; IMP:SGD.::GO:0007131; P:reciprocal meiotic recombination; IMP:SGD.::GO:0030435; P:sporulation resulting in formation of a cellular spore; IGI:SGD. | 47 | A1KUD0 | 104 | IHFB_NEIMF Integration host factor subunit be... | 61 | 4.9 | 31.2 | 34 | 49 | GO:0005694; C:chromosome; IEA:InterPro. | | | | | | | | | | GO:0003677; F:DNA binding; IEA:UniProtKB-KW. | | | | | | | | | | GO:0006310; P:DNA recombination; IEA:UniProtKB-KW.::GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0006417; P:regulation of translation; IEA:UniProtKB-KW.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW. | 48 | P0A0U2 | 104 | IHFB_NEIMB Integration host factor subunit be... | 61 | 4.9 | 31.2 | 34 | 49 | GO:0005694; C:chromosome; IEA:InterPro. | | | | | | | | | | GO:0003677; F:DNA binding; IEA:UniProtKB-KW. | | | | | | | | | | GO:0006310; P:DNA recombination; IEA:UniProtKB-KW.::GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0006417; P:regulation of translation; IEA:UniProtKB-KW.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW. | 49 | P0A0U1 | 104 | IHFB_NEIMA Integration host factor subunit be... | 61 | 4.9 | 31.2 | 34 | 49 | GO:0005694; C:chromosome; IEA:InterPro. | | | | | | | | | | GO:0003677; F:DNA binding; IEA:UniProtKB-KW. | | | | | | | | | | GO:0006310; P:DNA recombination; IEA:UniProtKB-KW.::GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0006417; P:regulation of translation; IEA:UniProtKB-KW.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW. | 50 | P0A0U3 | 104 | IHFB_NEIGO Integration host factor subunit be... | 61 | 4.9 | 31.2 | 34 | 49 | GO:0005694; C:chromosome; IEA:InterPro. | | | | | | | | | | GO:0003677; F:DNA binding; IEA:UniProtKB-KW. | | | | | | | | | | GO:0006310; P:DNA recombination; IEA:UniProtKB-KW.::GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0006417; P:regulation of translation; IEA:UniProtKB-KW.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW. | 51 | Q5NU13 | 402 | MKRN2_TAKRU Probable E3 ubiquitin-protein lig... | 35 | 4.9 | 32.7 | 43 | 57 | | | | | | | | | | | GO:0016874; F:ligase activity; IEA:UniProtKB-KW.::GO:0003676; F:nucleic acid binding; IEA:InterPro.::GO:0008270; F:zinc ion binding; IEA:InterPro. | | | | | | | | | | GO:0030154; P:cell differentiation; IEA:UniProtKB-KW.::GO:0007399; P:nervous system development; IEA:UniProtKB-KW.::GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW. | 52 | Q9FNZ2 | 430 | C3H48_ARATH Zinc finger CCCH domain-containin... | 20 | 6.3 | 32.7 | 60 | 70 | | | | | | | | | | | GO:0003677; F:DNA binding; IEA:UniProtKB-KW.::GO:0008270; F:zinc ion binding; IEA:InterPro. | | | | | | | | | | | 53 | Q4VBT5 | 439 | MKRN1_DANRE Probable E3 ubiquitin-protein lig... | 31 | 7.3 | 32.3 | 39 | 58 | | | | | | | | | | | GO:0016874; F:ligase activity; IEA:UniProtKB-KW.::GO:0003676; F:nucleic acid binding; IEA:InterPro.::GO:0008270; F:zinc ion binding; IEA:InterPro. | | | | | | | | | | | 54 | B8EMZ0 | 96 | IHFB_METSB Integration host factor subunit be... | 68 | 7.9 | 30.4 | 31 | 49 | GO:0005694; C:chromosome; IEA:InterPro. | | | | | | | | | | GO:0003677; F:DNA binding; IEA:UniProtKB-KW. | | | | | | | | | | GO:0006310; P:DNA recombination; IEA:UniProtKB-KW.::GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0006417; P:regulation of translation; IEA:UniProtKB-KW.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW. | 55 | Q9FL40 | 363 | C3H53_ARATH Zinc finger CCCH domain-containin... | 107 | 7.9 | 32.3 | 25 | 42 | | | | | | | | | | | GO:0003677; F:DNA binding; IEA:UniProtKB-KW.::GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW.::GO:0008270; F:zinc ion binding; IEA:InterPro. | | | | | | | | | | | 56 | Q98GS0 | 94 | IHFB_RHILO Integration host factor subunit be... | 68 | 8 | 30.4 | 31 | 44 | GO:0005694; C:chromosome; IEA:InterPro. | | | | | | | | | | GO:0003677; F:DNA binding; IEA:UniProtKB-KW. | | | | | | | | | | GO:0006310; P:DNA recombination; IEA:UniProtKB-KW.::GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0006417; P:regulation of translation; IEA:UniProtKB-KW.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW. | 57 | Q9TT91 | 478 | MKRN1_MACEU E3 ubiquitin-protein ligase makor... | 30 | 8.6 | 32.3 | 40 | 57 | | | | | | | | | | | GO:0016874; F:ligase activity; IEA:UniProtKB-KW.::GO:0003676; F:nucleic acid binding; IEA:InterPro.::GO:0008270; F:zinc ion binding; IEA:InterPro. | | | | | | | | | | | 58 | A0K5M4 | 107 | IHFB_BURCH Integration host factor subunit be... | 61 | 8.8 | 30.4 | 33 | 48 | GO:0005694; C:chromosome; IEA:InterPro. | | | | | | | | | | GO:0003677; F:DNA binding; IEA:UniProtKB-KW. | | | | | | | | | | GO:0006310; P:DNA recombination; IEA:UniProtKB-KW.::GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0006417; P:regulation of translation; IEA:UniProtKB-KW.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW. | 59 | B1JXS2 | 107 | IHFB_BURCC Integration host factor subunit be... | 61 | 8.8 | 30.4 | 33 | 48 | GO:0005694; C:chromosome; IEA:InterPro. | | | | | | | | | | GO:0003677; F:DNA binding; IEA:UniProtKB-KW. | | | | | | | | | | GO:0006310; P:DNA recombination; IEA:UniProtKB-KW.::GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0006417; P:regulation of translation; IEA:UniProtKB-KW.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW. | 60 | Q1BY25 | 107 | IHFB_BURCA Integration host factor subunit be... | 61 | 8.8 | 30.4 | 33 | 48 | GO:0005694; C:chromosome; IEA:InterPro. | | | | | | | | | | GO:0003677; F:DNA binding; IEA:UniProtKB-KW. | | | | | | | | | | GO:0006310; P:DNA recombination; IEA:UniProtKB-KW.::GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0006417; P:regulation of translation; IEA:UniProtKB-KW.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW. | 61 | Q39IF8 | 107 | IHFB_BURS3 Integration host factor subunit be... | 61 | 9.1 | 30.4 | 33 | 48 | GO:0005694; C:chromosome; IEA:InterPro. | | | | | | | | | | GO:0003677; F:DNA binding; IEA:UniProtKB-KW. | | | | | | | | | | GO:0006310; P:DNA recombination; IEA:UniProtKB-KW.::GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0006417; P:regulation of translation; IEA:UniProtKB-KW.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW. |