rec. | Subject | Hit Length | Description | Align.Len | E value | Bit score | % ident. | % pos. | GO associations |
61 | Q5R8F7 | 636 | PABP1_PONAB Polyadenylate-binding protein 1 O... | 63 | 0.38 | 38.9 | 32 | 56 | GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.::GO:0005681; C:spliceosomal complex; IEA:UniProtKB-KW. | | | | | | | | | | GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW. | | | | | | | | | | GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.::GO:2000623; P:negative regulation of nuclear-transcribed mRNA catabolic process, nonsense-mediated decay; ISS:UniProtKB.::GO:0000184; P:nuclear-transcribed mRNA catabolic process, nonsense-mediated decay; IEA:UniProtKB-KW.::GO:0008380; P:RNA splicing; IEA:UniProtKB-KW. | 62 | Q4PSD1 | 518 | PUM14_ARATH Pumilio homolog 14 OS=Arabidopsis... | 296 | 0.000003 | 55.1 | 24 | 43 | GO:0005737; C:cytoplasm; IDA:TAIR.::GO:0005634; C:nucleus; IDA:TAIR. | | | | | | | | | | GO:0003723; F:RNA binding; IEA:UniProtKB-KW. | | | | | | | | | | GO:0006417; P:regulation of translation; IEA:UniProtKB-KW. | 63 | P23241 | 519 | ELAV_DROVI Protein elav OS=Drosophila virilis... | 62 | 1.4 | 37 | 29 | 55 | GO:0016592; C:mediator complex; IEA:InterPro. | | | | | | | | | | GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW.::GO:0001104; F:RNA polymerase II transcription cofactor activity; IEA:InterPro. | | | | | | | | | | | 64 | P16914 | 483 | ELAV_DROME Protein elav OS=Drosophila melanog... | 62 | 1.4 | 37 | 29 | 55 | GO:0015030; C:Cajal body; IDA:FlyBase. | | | | | | | | | | GO:0003729; F:mRNA binding; NAS:FlyBase.::GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0008266; F:poly(U) RNA binding; IDA:FlyBase.::GO:0000900; F:translation repressor activity, nucleic acid binding; NAS:UniProtKB. | | | | | | | | | | GO:0007417; P:central nervous system development; IMP:FlyBase.::GO:0009790; P:embryo development; NAS:UniProtKB.::GO:0007281; P:germ cell development; NAS:UniProtKB.::GO:0031441; P:negative regulation of mRNA 3'-end processing; IDA:FlyBase.::GO:0007319; P:negative regulation of oskar mRNA translation; NAS:UniProtKB. | 65 | Q9LNV5 | 481 | C3H4_ARATH Zinc finger CCCH domain-containing... | 87 | 0.036 | 42 | 29 | 46 | GO:0005634; C:nucleus; IDA:TAIR. | | | | | | | | | | GO:0003677; F:DNA binding; IEA:UniProtKB-KW.::GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW.::GO:0008270; F:zinc ion binding; IEA:InterPro. | | | | | | | | | | GO:0042742; P:defense response to bacterium; IGI:TAIR. | 66 | O09032 | 373 | ELAV4_RAT ELAV-like protein 4 OS=Rattus norve... | 115 | 7.5 | 34.3 | 26 | 45 | | | | | | | | | | | GO:0017091; F:AU-rich element binding; ISS:UniProtKB.::GO:0000166; F:nucleotide binding; IEA:InterPro. | | | | | | | | | | | 67 | P32831 | 672 | NGR1_YEAST Negative growth regulatory protein... | 91 | 0.19 | 39.7 | 27 | 54 | GO:0000932; C:cytoplasmic mRNA processing body; IDA:SGD.::GO:0010494; C:cytoplasmic stress granule; IDA:SGD.::GO:0048471; C:perinuclear region of cytoplasm; IDA:SGD. | | | | | | | | | | GO:0003729; F:mRNA binding; IDA:SGD.::GO:0000166; F:nucleotide binding; IEA:InterPro. | | | | | | | | | | GO:0061158; P:3'-UTR-mediated mRNA destabilization; IDA:SGD.::GO:0007005; P:mitochondrion organization; IMP:SGD. | 68 | Q6Z358 | 486 | C3H49_ORYSJ Zinc finger CCCH domain-containin... | 62 | 0.42 | 38.5 | 27 | 52 | | | | | | | | | | | GO:0003677; F:DNA binding; IEA:UniProtKB-KW.::GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW.::GO:0008270; F:zinc ion binding; IEA:InterPro. | | | | | | | | | | | 69 | Q9SAB3 | 405 | RB45B_ARATH Polyadenylate-binding protein RBP... | 83 | 0.0001 | 49.7 | 35 | 60 | GO:0005634; C:nucleus; ISS:UniProtKB. | | | | | | | | | | GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0008143; F:poly(A) RNA binding; ISS:UniProtKB. | | | | | | | | | | GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.::GO:0010193; P:response to ozone; IEP:TAIR.::GO:0006950; P:response to stress; IEA:UniProtKB-KW. | 70 | P42731 | 629 | PABP2_ARATH Polyadenylate-binding protein 2 O... | 104 | 0.22 | 39.7 | 27 | 48 | GO:0005829; C:cytosol; IDA:TAIR. | | | | | | | | | | GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW. | | | | | | | | | | GO:0009651; P:response to salt stress; IEP:TAIR. | 71 | Q8CH84 | 359 | ELAV2_RAT ELAV-like protein 2 OS=Rattus norve... | 117 | 9.7 | 33.9 | 26 | 43 | | | | | | | | | | | GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW. | | | | | | | | | | | 72 | P26378 | 380 | ELAV4_HUMAN ELAV-like protein 4 OS=Homo sapie... | 115 | 7.5 | 34.3 | 26 | 45 | | | | | | | | | | | GO:0017091; F:AU-rich element binding; IDA:UniProtKB.::GO:0003730; F:mRNA 3'-UTR binding; TAS:ProtInc.::GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW. | | | | | | | | | | GO:0006397; P:mRNA processing; TAS:ProtInc. | 73 | A5DW14 | 661 | PABP_LODEL Polyadenylate-binding protein, cyt... | 68 | 0.056 | 41.6 | 31 | 57 | GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.::GO:0005634; C:nucleus; IEA:UniProtKB-SubCell. | | | | | | | | | | GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW. | | | | | | | | | | GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.::GO:0051028; P:mRNA transport; IEA:UniProtKB-KW.::GO:0006417; P:regulation of translation; IEA:UniProtKB-KW. | 74 | Q61701 | 385 | ELAV4_MOUSE ELAV-like protein 4 OS=Mus muscul... | 115 | 8.8 | 33.9 | 26 | 45 | | | | | | | | | | | GO:0017091; F:AU-rich element binding; ISS:UniProtKB.::GO:0000166; F:nucleotide binding; IEA:InterPro. | | | | | | | | | | | 75 | Q9IBD0 | 501 | CELF1_DANRE CUGBP Elav-like family member 1 O... | 209 | 0.000007 | 53.9 | 22 | 38 | GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.::GO:0005634; C:nucleus; IEA:UniProtKB-SubCell. | | | | | | | | | | GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW. | | | | | | | | | | GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.::GO:0008380; P:RNA splicing; IEA:UniProtKB-KW. | 76 | Q9FMH4 | 527 | PUM13_ARATH Putative pumilio homolog 13 OS=Ar... | 313 | 0.000007 | 53.9 | 21 | 44 | GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell. | | | | | | | | | | GO:0003723; F:RNA binding; IEA:UniProtKB-KW. | | | | | | | | | | GO:0006417; P:regulation of translation; IEA:UniProtKB-KW. | 77 | Q5AI15 | 629 | PABP_CANAL Polyadenylate-binding protein, cyt... | 62 | 0.24 | 39.3 | 29 | 58 | GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.::GO:0005634; C:nucleus; IEA:UniProtKB-SubCell. | | | | | | | | | | GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW. | | | | | | | | | | GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.::GO:0051028; P:mRNA transport; IEA:UniProtKB-KW.::GO:0006417; P:regulation of translation; IEA:UniProtKB-KW. | 78 | Q9C5E7 | 861 | PUM6_ARATH Pumilio homolog 6, chloroplastic O... | 249 | 0.00001 | 53.5 | 21 | 39 | GO:0009507; C:chloroplast; IEA:UniProtKB-SubCell. | | | | | | | | | | GO:0003729; F:mRNA binding; IDA:UniProtKB. | | | | | | | | | | GO:0006417; P:regulation of translation; IEA:UniProtKB-KW. | 79 | Q13310 | 644 | PABP4_HUMAN Polyadenylate-binding protein 4 O... | 73 | 0.009 | 44.3 | 34 | 56 | GO:0005737; C:cytoplasm; IDA:MGI.::GO:0030529; C:ribonucleoprotein complex; IDA:UniProtKB. | | | | | | | | | | GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0008143; F:poly(A) RNA binding; IDA:MGI.::GO:0008266; F:poly(U) RNA binding; IDA:MGI.::GO:0005515; F:protein binding; IPI:IntAct.::GO:0003723; F:RNA binding; IEA:InterPro. | | | | | | | | | | GO:0007596; P:blood coagulation; TAS:ProtInc.::GO:0006401; P:RNA catabolic process; TAS:ProtInc.::GO:0006396; P:RNA processing; TAS:ProtInc.::GO:0006412; P:translation; TAS:ProtInc. | 80 | Q98SP8 | 629 | EPABA_XENLA Embryonic polyadenylate-binding p... | 193 | 0.051 | 41.6 | 20 | 42 | GO:0005737; C:cytoplasm; IDA:UniProtKB. | | | | | | | | | | GO:0031370; F:eukaryotic initiation factor 4G binding; IPI:UniProtKB.::GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0008143; F:poly(A) RNA binding; IDA:UniProtKB.::GO:0043621; F:protein self-association; IPI:UniProtKB. | | | | | | | | | | GO:0043009; P:chordate embryonic development; IEP:UniProtKB.::GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.::GO:0048255; P:mRNA stabilization; IDA:UniProtKB.::GO:0060212; P:negative regulation of nuclear-transcribed mRNA poly(A) tail shortening; IDA:UniProtKB.::GO:0006412; P:translation; IEA:UniProtKB-KW. | 81 | Q9SX80 | 434 | R47CP_ARATH Polyadenylate-binding protein RBP... | 211 | 0.008 | 43.9 | 23 | 43 | GO:0010494; C:cytoplasmic stress granule; ISS:UniProtKB.::GO:0005634; C:nucleus; ISS:UniProtKB. | | | | | | | | | | GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0008143; F:poly(A) RNA binding; ISS:UniProtKB. | | | | | | | | | | GO:0034605; P:cellular response to heat; ISS:UniProtKB.::GO:0006397; P:mRNA processing; IEA:UniProtKB-KW. | 82 | Q6GR16 | 629 | EPABB_XENLA Embryonic polyadenylate-binding p... | 198 | 0.013 | 43.5 | 21 | 40 | GO:0005737; C:cytoplasm; ISS:UniProtKB. | | | | | | | | | | GO:0031370; F:eukaryotic initiation factor 4G binding; ISS:UniProtKB.::GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0008143; F:poly(A) RNA binding; ISS:UniProtKB.::GO:0043621; F:protein self-association; ISS:UniProtKB. | | | | | | | | | | GO:0043009; P:chordate embryonic development; ISS:UniProtKB.::GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.::GO:0048255; P:mRNA stabilization; ISS:UniProtKB.::GO:0060212; P:negative regulation of nuclear-transcribed mRNA poly(A) tail shortening; ISS:UniProtKB.::GO:0006412; P:translation; IEA:UniProtKB-KW. | 83 | Q9UPN6 | 1271 | SCAF8_HUMAN Protein SCAF8 OS=Homo sapiens (Hu... | 89 | 0.009 | 44.3 | 29 | 51 | GO:0016363; C:nuclear matrix; ISS:UniProtKB.::GO:0005681; C:spliceosomal complex; IEA:UniProtKB-KW. | | | | | | | | | | GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW.::GO:0043175; F:RNA polymerase core enzyme binding; IPI:UniProtKB. | | | | | | | | | | GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.::GO:0008380; P:RNA splicing; IEA:UniProtKB-KW. | 84 | Q5R8Y8 | 508 | CELF2_PONAB CUGBP Elav-like family member 2 O... | 209 | 0.00002 | 52.4 | 22 | 36 | GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.::GO:0005634; C:nucleus; IEA:UniProtKB-SubCell. | | | | | | | | | | GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW. | | | | | | | | | | GO:0006397; P:mRNA processing; IEA:UniProtKB-KW. | 85 | O95319 | 508 | CELF2_HUMAN CUGBP Elav-like family member 2 O... | 209 | 0.00002 | 52.4 | 22 | 36 | GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.::GO:0005634; C:nucleus; IEA:UniProtKB-SubCell. | | | | | | | | | | GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0003723; F:RNA binding; TAS:ProtInc. | | | | | | | | | | GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.::GO:0008016; P:regulation of heart contraction; TAS:ProtInc. | 86 | Q792H5 | 508 | CELF2_RAT CUGBP Elav-like family member 2 OS=... | 209 | 0.00002 | 52.4 | 22 | 36 | GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.::GO:0005634; C:nucleus; IEA:UniProtKB-SubCell. | | | | | | | | | | GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0003723; F:RNA binding; IDA:RGD. | | | | | | | | | | | 87 | Q9Z0H4 | 508 | CELF2_MOUSE CUGBP Elav-like family member 2 O... | 209 | 0.00002 | 52.4 | 22 | 36 | GO:0005737; C:cytoplasm; IDA:MGI.::GO:0005634; C:nucleus; IDA:MGI.::GO:0005625; C:soluble fraction; IDA:MGI. | | | | | | | | | | GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW. | | | | | | | | | | GO:0006376; P:mRNA splice site selection; IDA:MGI. | 88 | Q6DEY7 | 629 | EPAB_XENTR Embryonic polyadenylate-binding pr... | 198 | 0.005 | 45.1 | 21 | 41 | GO:0005737; C:cytoplasm; ISS:UniProtKB. | | | | | | | | | | GO:0031370; F:eukaryotic initiation factor 4G binding; ISS:UniProtKB.::GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0008143; F:poly(A) RNA binding; ISS:UniProtKB.::GO:0043621; F:protein self-association; ISS:UniProtKB. | | | | | | | | | | GO:0043009; P:chordate embryonic development; ISS:UniProtKB.::GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.::GO:0048255; P:mRNA stabilization; ISS:UniProtKB.::GO:0060212; P:negative regulation of nuclear-transcribed mRNA poly(A) tail shortening; ISS:UniProtKB.::GO:0006412; P:translation; IEA:UniProtKB-KW. | 89 | A4IIM2 | 513 | CELF2_XENTR CUGBP Elav-like family member 2 O... | 209 | 0.00004 | 51.6 | 22 | 36 | GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.::GO:0005634; C:nucleus; IEA:UniProtKB-SubCell. | | | | | | | | | | GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW. | | | | | | | | | | GO:0006397; P:mRNA processing; IEA:UniProtKB-KW. | 90 | Q7ZXE2 | 536 | CELF2_XENLA CUGBP Elav-like family member 2 O... | 209 | 0.00004 | 51.6 | 22 | 36 | GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.::GO:0005634; C:nucleus; IEA:UniProtKB-SubCell. | | | | | | | | | | GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW. | | | | | | | | | | GO:0006397; P:mRNA processing; IEA:UniProtKB-KW. | 91 | Q9SX79 | 432 | RB47C_ARATH Polyadenylate-binding protein RBP... | 210 | 0.001 | 46.2 | 22 | 44 | GO:0010494; C:cytoplasmic stress granule; ISS:UniProtKB.::GO:0005634; C:nucleus; ISS:UniProtKB. | | | | | | | | | | GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0008143; F:poly(A) RNA binding; ISS:UniProtKB. | | | | | | | | | | GO:0034605; P:cellular response to heat; ISS:UniProtKB.::GO:0006397; P:mRNA processing; IEA:UniProtKB-KW. |