Fungal Genome Collection
University of Nebraska Lincoln
School of Biological Sciences and Center for Plant Science Innovation
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UniProt_SwissProt BLAST: Single locus
Species:
Agaricus bisporus bisporus H97
Locus:
176563
Length:
1522
Number of sequences:
10438
Description:
estExt_fgenesh2_pg.C_20247
rec.SubjectHit LengthDescriptionAlign.LenE valueBit score% ident.  % pos.GO associations
1Q4PI89    1723   SPT6_USTMA Transcription elongation factor SP...15930     881     38     56GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0032784; P:regulation of transcription elongation, DNA-dependent; IEA:InterPro.::GO:0006357; P:regulation of transcription from RNA polymerase II promoter; IEA:InterPro.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
2P0CR73    1506   SPT6_CRYNB Transcription elongation factor SP...15560     845     37     54GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0003723; F:RNA binding; IEA:InterPro.
GO:0032784; P:regulation of transcription elongation, DNA-dependent; IEA:InterPro.::GO:0006357; P:regulation of transcription from RNA polymerase II promoter; IEA:InterPro.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
3P0CR72    1506   SPT6_CRYNJ Transcription elongation factor SP...15560     845     37     54GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0003723; F:RNA binding; IEA:InterPro.
GO:0032784; P:regulation of transcription elongation, DNA-dependent; IEA:InterPro.::GO:0006357; P:regulation of transcription from RNA polymerase II promoter; IEA:InterPro.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
4Q09915    1365   SPT6_SCHPO Transcription elongation factor sp...14160     711     36     54GO:0005739; C:mitochondrion; ISS:PomBase.::GO:0000790; C:nuclear chromatin; ISS:PomBase.::GO:0008023; C:transcription elongation factor complex; ISS:PomBase.
GO:0016788; F:hydrolase activity, acting on ester bonds; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:InterPro.
GO:0006336; P:DNA replication-independent nucleosome assembly; ISS:PomBase.::GO:0043486; P:histone exchange; NAS:PomBase.::GO:0034401; P:regulation of transcription by chromatin organization; ISS:PomBase.::GO:0032784; P:regulation of transcription elongation, DNA-dependent; IEA:InterPro.::GO:0006357; P:regulation of transcription from RNA polymerase II promoter; IEA:InterPro.::GO:0006368; P:transcription elongation from RNA polymerase II promoter; ISS:PomBase.
5Q4HYQ4    1408   SPT6_GIBZE Transcription elongation factor SP...14310     711     35     53GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0003723; F:RNA binding; IEA:InterPro.
GO:0032784; P:regulation of transcription elongation, DNA-dependent; IEA:InterPro.::GO:0006357; P:regulation of transcription from RNA polymerase II promoter; IEA:InterPro.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
6Q8NIV6    1402   SPT6_NEUCR Transcription elongation factor sp...12680     684     35     54GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0003723; F:RNA binding; IEA:InterPro.
GO:0032784; P:regulation of transcription elongation, DNA-dependent; IEA:InterPro.::GO:0006357; P:regulation of transcription from RNA polymerase II promoter; IEA:InterPro.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
7Q2U561    1422   SPT6_ASPOR Transcription elongation factor sp...14320     676     34     53GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0003723; F:RNA binding; IEA:InterPro.
GO:0032784; P:regulation of transcription elongation, DNA-dependent; IEA:InterPro.::GO:0006357; P:regulation of transcription from RNA polymerase II promoter; IEA:InterPro.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
8Q4WWH6    1420   SPT6_ASPFU Transcription elongation factor sp...14310     660     35     52GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0032784; P:regulation of transcription elongation, DNA-dependent; IEA:InterPro.::GO:0006357; P:regulation of transcription from RNA polymerase II promoter; IEA:InterPro.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
9Q5B7Q7    1417   SPT6_EMENI Transcription elongation factor sp...13860     650     33     53GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0032784; P:regulation of transcription elongation, DNA-dependent; IEA:InterPro.::GO:0006357; P:regulation of transcription from RNA polymerase II promoter; IEA:InterPro.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
10Q6BVE1    1439   SPT6_DEBHA Transcription elongation factor SP...14460     595     32     50GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0032784; P:regulation of transcription elongation, DNA-dependent; IEA:InterPro.::GO:0006357; P:regulation of transcription from RNA polymerase II promoter; IEA:InterPro.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
11Q3MNT0    1401   SPT6_CANAL Transcription elongation factor SP...14216e-155     514     30     49GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0030448; P:hyphal growth; IMP:CGD.::GO:0032784; P:regulation of transcription elongation, DNA-dependent; IEA:InterPro.::GO:0006357; P:regulation of transcription from RNA polymerase II promoter; IEA:InterPro.::GO:0006368; P:transcription elongation from RNA polymerase II promoter; IGI:CGD.
12Q6CVK3    1460   SPT6_KLULA Transcription elongation factor SP...13154e-153     511     31     50GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0016788; F:hydrolase activity, acting on ester bonds; IEA:InterPro.
GO:0032784; P:regulation of transcription elongation, DNA-dependent; IEA:InterPro.::GO:0006357; P:regulation of transcription from RNA polymerase II promoter; IEA:InterPro.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
13Q75EP8    1432   SPT6_ASHGO Transcription elongation factor SP...14501e-148     498     29     50GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0016788; F:hydrolase activity, acting on ester bonds; IEA:InterPro.
GO:0032784; P:regulation of transcription elongation, DNA-dependent; IEA:InterPro.::GO:0006357; P:regulation of transcription from RNA polymerase II promoter; IEA:InterPro.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
14Q6FLB1    1449   SPT6_CANGA Transcription elongation factor SP...14126e-148     496     30     49GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0016788; F:hydrolase activity, acting on ester bonds; IEA:InterPro.
GO:0032784; P:regulation of transcription elongation, DNA-dependent; IEA:InterPro.::GO:0006357; P:regulation of transcription from RNA polymerase II promoter; IEA:InterPro.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
15P23615    1451   SPT6_YEAST Transcription elongation factor SP...14949e-145     487     29     49GO:0005739; C:mitochondrion; IDA:SGD.::GO:0005634; C:nucleus; IDA:SGD.::GO:0035327; C:transcriptionally active chromatin; IDA:SGD.
GO:0000991; F:core RNA polymerase II binding transcription factor activity; IMP:SGD.::GO:0001073; F:DNA binding transcription antitermination factor activity; IMP:SGD.::GO:0042393; F:histone binding; IDA:SGD.::GO:0016788; F:hydrolase activity, acting on ester bonds; IEA:InterPro.::GO:0031491; F:nucleosome binding; IMP:SGD.
GO:0070827; P:chromatin maintenance; IMP:SGD.::GO:0006338; P:chromatin remodeling; IMP:SGD.::GO:0000433; P:negative regulation of transcription from RNA polymerase II promoter by glucose; IMP:SGD.::GO:0006334; P:nucleosome assembly; IDA:SGD.::GO:0016973; P:poly(A)+ mRNA export from nucleus; IMP:SGD.::GO:0071931; P:positive regulation of transcription involved in G1/S phase of mitotic cell cycle; IMP:SGD.::GO:0000414; P:regulation of histone H3-K36 methylation; IMP:SGD.::GO:0031440; P:regulation of mRNA 3'-end processing; IMP:SGD.::GO:0060303; P:regulation of nucleosome density; IMP:SGD.::GO:0034401; P:regulation of transcription by chromatin organization; IMP:SGD.::GO:0032784; P:regulation of transcription elongation, DNA-dependent; IEA:InterPro.::GO:0043618; P:regulation of transcription from RNA polymerase II promoter in response to stress; IMP:SGD.::GO:0001178; P:regulation of transcriptional start site selection at RNA polymerase II promoter; IMP:SGD.
16Q7KZ85    1726   SPT6H_HUMAN Transcription elongation factor S...14242e-116     409     27     44GO:0005634; C:nucleus; NAS:UniProtKB.
GO:0016788; F:hydrolase activity, acting on ester bonds; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:InterPro.::GO:0003700; F:sequence-specific DNA binding transcription factor activity; TAS:ProtInc.
GO:0006338; P:chromatin remodeling; NAS:UniProtKB.::GO:0032784; P:regulation of transcription elongation, DNA-dependent; IEA:InterPro.::GO:0006357; P:regulation of transcription from RNA polymerase II promoter; IEA:InterPro.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
17Q62383    1726   SPT6H_MOUSE Transcription elongation factor S...14327e-115     404     27     44GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0016788; F:hydrolase activity, acting on ester bonds; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:InterPro.
GO:0032784; P:regulation of transcription elongation, DNA-dependent; IEA:InterPro.::GO:0006357; P:regulation of transcription from RNA polymerase II promoter; IEA:InterPro.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
18Q8UVK2    1726   SPT6H_DANRE Transcription elongation factor S...13519e-112     394     27     44GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0016788; F:hydrolase activity, acting on ester bonds; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:InterPro.
GO:0035050; P:embryonic heart tube development; IMP:ZFIN.::GO:0071599; P:otic vesicle development; IMP:ZFIN.::GO:0032784; P:regulation of transcription elongation, DNA-dependent; IEA:InterPro.::GO:0006357; P:regulation of transcription from RNA polymerase II promoter; IEA:InterPro.::GO:0001756; P:somitogenesis; IMP:ZFIN.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
19Q9W420    1831   SPT6H_DROME Transcription elongation factor S...13722e-107     382     27     44GO:0035363; C:histone locus body; IDA:FlyBase.::GO:0005705; C:polytene chromosome interband; IDA:UniProtKB.::GO:0005703; C:polytene chromosome puff; IDA:UniProtKB.::GO:0008023; C:transcription elongation factor complex; IPI:UniProtKB.::GO:0035327; C:transcriptionally active chromatin; IDA:FlyBase.
GO:0003682; F:chromatin binding; IDA:FlyBase.::GO:0016788; F:hydrolase activity, acting on ester bonds; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:InterPro.
GO:0032968; P:positive regulation of transcription elongation from RNA polymerase II promoter; IMP:FlyBase.::GO:0002805; P:regulation of antimicrobial peptide biosynthetic process; IMP:FlyBase.::GO:0006366; P:transcription from RNA polymerase II promoter; IEP:UniProtKB.
20P34703    1521   SPT6H_CAEEL Suppressor of Ty 6 homolog OS=Cae...12912e-86     315     25     43GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0016788; F:hydrolase activity, acting on ester bonds; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:InterPro.
GO:0009792; P:embryo development ending in birth or egg hatching; IMP:WormBase.::GO:0040007; P:growth; IMP:WormBase.::GO:0002119; P:nematode larval development; IMP:WormBase.::GO:0032784; P:regulation of transcription elongation, DNA-dependent; IEA:InterPro.::GO:0006357; P:regulation of transcription from RNA polymerase II promoter; IEA:InterPro.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
21Q93148    1521   SPT6H_CAEBR Suppressor of Ty 6 homolog OS=Cae...13077e-85     310     25     45GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0016788; F:hydrolase activity, acting on ester bonds; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:InterPro.
GO:0032784; P:regulation of transcription elongation, DNA-dependent; IEA:InterPro.::GO:0006357; P:regulation of transcription from RNA polymerase II promoter; IEA:InterPro.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
22P46837    773   YHGF_ECOLI Protein yhgF OS=Escherichia coli (...3250.000000004     65.1     27     39
GO:0016788; F:hydrolase activity, acting on ester bonds; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
GO:0006139; P:nucleobase-containing compound metabolic process; IEA:InterPro.
23Q51152    757   YHGF_NEIMB Uncharacterized protein NMB0075 OS...5110.00000006     61.2     23     41
GO:0003677; F:DNA binding; IEA:InterPro.::GO:0016788; F:hydrolase activity, acting on ester bonds; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
GO:0006281; P:DNA repair; IEA:InterPro.
24P57072    757   YHGF_NEIMA Uncharacterized protein NMA0194 OS...1920.0000002     59.7     30     41
GO:0003677; F:DNA binding; IEA:InterPro.::GO:0016788; F:hydrolase activity, acting on ester bonds; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
GO:0006281; P:DNA repair; IEA:InterPro.
25Q45388    791   TEX_BORPE Protein tex OS=Bordetella pertussis...3590.0000002     59.3     25     40
GO:0016788; F:hydrolase activity, acting on ester bonds; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
GO:0006139; P:nucleobase-containing compound metabolic process; IEA:InterPro.
26P71353    762   Y568_HAEIN Uncharacterized protein HI_0568 OS...4670.0000008     57.4     23     38
GO:0003677; F:DNA binding; IEA:InterPro.::GO:0016788; F:hydrolase activity, acting on ester bonds; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
GO:0006281; P:DNA repair; IEA:InterPro.
27Q8N5C6    995   SRBD1_HUMAN S1 RNA-binding domain-containing ...3640.0000009     57.4     23     38
GO:0016788; F:hydrolase activity, acting on ester bonds; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
GO:0006139; P:nucleobase-containing compound metabolic process; IEA:InterPro.
28Q5RDI0    995   SRBD1_PONAB S1 RNA-binding domain-containing ...3660.000002     56.6     23     38
GO:0016788; F:hydrolase activity, acting on ester bonds; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
GO:0006139; P:nucleobase-containing compound metabolic process; IEA:InterPro.
29Q497V5    1015   SRBD1_MOUSE S1 RNA-binding domain-containing ...3680.00003     52.4     21     35
GO:0016788; F:hydrolase activity, acting on ester bonds; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
GO:0006139; P:nucleobase-containing compound metabolic process; IEA:InterPro.
30O31489    719   YDCI_BACSU Uncharacterized protein ydcI OS=Ba...7560.00007     51.2     22     39
GO:0016788; F:hydrolase activity, acting on ester bonds; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:InterPro.
GO:0006139; P:nucleobase-containing compound metabolic process; IEA:InterPro.
31P47953    245   LEG3_CRILO Galectin-3 OS=hamster). GN=LGALS3 ...830.076     40.4     35     36GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.::GO:0005576; C:extracellular region; IEA:UniProtKB-SubCell.::GO:0005681; C:spliceosomal complex; IEA:UniProtKB-KW.
GO:0019863; F:IgE binding; IEA:UniProtKB-KW.
GO:0030154; P:cell differentiation; IEA:UniProtKB-KW.::GO:0045087; P:innate immune response; IEA:UniProtKB-KW.::GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.::GO:0008380; P:RNA splicing; IEA:UniProtKB-KW.
records
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