FGC: Single Locus Summary

UniProt_SwissProt BLAST: Single locus

Species:

Agaricus bisporus bisporus H97

Locus:

176463

Length:

795

Number of sequences:

10438

Description:

estExt_fgenesh2_pg.C_20147

rec.	Subject	Hit Length	Description	Align.Len	E value	Bit score	% ident.	% pos.	GO associations
1	P59326	559	YTHD1_MOUSE YTH domain family protein 1 OS=Mu...	200	1e-58	214	50	70


2	Q0VCZ3	580	YTHD2_BOVIN YTH domain family protein 2 OS=Bo...	171	4e-58	213	53	73


3	Q4R5D9	579	YTHD2_MACFA YTH domain family protein 2 OS=Ma...	174	4e-58	213	52	72


4	Q9Y5A9	579	YTHD2_HUMAN YTH domain family protein 2 OS=Ho...	171	4e-58	213	53	73

									GO:0006959; P:humoral immune response; TAS:ProtInc.
5	Q9BYJ9	559	YTHD1_HUMAN YTH domain family protein 1 OS=Ho...	171	9e-58	211	53	73


6	Q8BYK6	585	YTHD3_MOUSE YTH domain family protein 3 OS=Mu...	171	9e-57	209	53	72


7	Q5RFL8	585	YTHD3_PONAB YTH domain family protein 3 OS=Po...	171	1e-56	209	53	72


8	Q7Z739	585	YTHD3_HUMAN YTH domain family protein 3 OS=Ho...	171	1e-56	209	53	72


9	Q06390	306	YD374_YEAST YTH domain-containing protein YDR...	145	2e-27	117	41	63


10	Q5R746	671	YTDC2_PONAB YTH domain-containing protein 2 O...	140	0.000000000000003	83.2	36	56
									GO:0004386; F:helicase activity; IEA:InterPro.

11	B2RR83	1445	YTDC2_MOUSE Probable ATP-dependent RNA helica...	139	0.00000000000004	80.5	36	56
									GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0008026; F:ATP-dependent helicase activity; IEA:InterPro.::GO:0003676; F:nucleic acid binding; IEA:InterPro.

12	Q9H6S0	1430	YTDC2_HUMAN Probable ATP-dependent RNA helica...	140	0.00000000000006	79.7	35	56
									GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0008026; F:ATP-dependent helicase activity; IEA:InterPro.::GO:0003676; F:nucleic acid binding; IEA:InterPro.

13	A9LNK9	631	CPSF_ARATH Cleavage and polyadenylation speci...	143	0.00000000002	71.2	28	50	GO:0005634; C:nucleus; IDA:TAIR.
									GO:0005516; F:calmodulin binding; IDA:TAIR.::GO:0003677; F:DNA binding; IEA:UniProtKB-KW.::GO:0004519; F:endonuclease activity; IDA:TAIR.::GO:0003723; F:RNA binding; IDA:TAIR.::GO:0008270; F:zinc ion binding; IEA:InterPro.
									GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.
14	Q96MU7	727	YTDC1_HUMAN YTH domain-containing protein 1 O...	142	0.0000000002	68.2	30	49
									GO:0005515; F:protein binding; IPI:UniProtKB.

15	Q9QY02	738	YTDC1_RAT YTH domain-containing protein 1 OS=...	142	0.0000000002	68.2	30	49	GO:0016604; C:nuclear body; IDA:RGD.
									GO:0005515; F:protein binding; IPI:RGD.
									GO:0000398; P:nuclear mRNA splicing, via spliceosome; IDA:RGD.
16	Q0DA50	665	C3H45_ORYSJ Zinc finger CCCH domain-containin...	144	0.0000000006	66.2	25	50
									GO:0003677; F:DNA binding; IEA:UniProtKB-KW.::GO:0008270; F:zinc ion binding; IEA:InterPro.

17	O74958	488	MMI1_SCHPO YTH domain-containing protein mmi1...	138	0.0004	47.4	21	46	GO:0033620; C:Mei2 nuclear dot; IDA:PomBase.
									GO:0003729; F:mRNA binding; IDA:PomBase.::GO:0005515; F:protein binding; IPI:PomBase.
									GO:0045835; P:negative regulation of meiosis; IMP:PomBase.::GO:0033621; P:nuclear-transcribed mRNA catabolic process, meiosis-specific transcripts; IMP:PomBase.
18	Q8HTL6	822	RPOB1_CHLRE DNA-directed RNA polymerase subun...	33	1.8	35.8	52	64	GO:0009507; C:chloroplast; IEA:UniProtKB-SubCell.
									GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.::GO:0032549; F:ribonucleoside binding; IEA:InterPro.

19	Q6UDJ5	3195	DEN_PSHV1 Deneddylase UL36 OS=(PsHV-1) (Pache...	97	5.1	34.7	27	37	GO:0042025; C:host cell nucleus; IEA:UniProtKB-SubCell.::GO:0019033; C:viral tegument; IEA:UniProtKB-SubCell.
									GO:0004197; F:cysteine-type endopeptidase activity; IEA:InterPro.::GO:0008242; F:omega peptidase activity; IEA:InterPro.
									GO:0044419; P:interspecies interaction between organisms; IEA:UniProtKB-KW.::GO:0006508; P:proteolysis; IEA:UniProtKB-KW.

records

‹‹

››

Total records:

1 - 19

Elimate unknown annotation:

Filter for keyword on hit description:

Select upper E value:

Select lower bit score:

Select lower %idenity value:

Select lower %positive value:

Taxonomic division:

Lower limit on hit length:

Lower limit on alignment length::