Fungal Genome Collection
University of Nebraska Lincoln
School of Biological Sciences and Center for Plant Science Innovation
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UniProt_SwissProt BLAST: Single locus
Species:
Agaricus bisporus bisporus H97
Locus:
116162
Length:
368
Number of sequences:
10438
Description:
Genemark.2630_g
rec.SubjectHit LengthDescriptionAlign.LenE valueBit score% ident.  % pos.GO associations
181P51516    654   GAG_SRV2 Gag polyprotein OS=Simian retrovirus...450.7     35.8     40     47GO:0019028; C:viral capsid; IEA:UniProtKB-KW.
GO:0003676; F:nucleic acid binding; IEA:UniProtKB-KW.::GO:0005198; F:structural molecule activity; IEA:InterPro.::GO:0008270; F:zinc ion binding; IEA:InterPro.
GO:0044419; P:interspecies interaction between organisms; IEA:UniProtKB-KW.::GO:0016032; P:viral reproduction; IEA:InterPro.
182A6NKG5    1359   RTL1_HUMAN Retrotransposon-like protein 1 OS=...1180.7     35.8     25     48GO:0016021; C:integral to membrane; IEA:UniProtKB-KW.
GO:0007275; P:multicellular organismal development; IEA:UniProtKB-KW.
183P27536    555   POST_XENLA Posterior protein OS=Xenopus laevi...180.89     35.4     61     89
GO:0003677; F:DNA binding; IEA:UniProtKB-KW.::GO:0008270; F:zinc ion binding; IEA:InterPro.
GO:0007275; P:multicellular organismal development; IEA:UniProtKB-KW.
184P04146    1409   COPIA_DROME Copia protein OS=Drosophila melan...361     35.4     44     56
GO:0004190; F:aspartic-type endopeptidase activity; IEA:UniProtKB-KW.::GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0003676; F:nucleic acid binding; IEA:InterPro.::GO:0008270; F:zinc ion binding; IEA:InterPro.
GO:0015074; P:DNA integration; IEA:InterPro.::GO:0006508; P:proteolysis; IEA:UniProtKB-KW.
185Q7Z6E9    1792   RBBP6_HUMAN E3 ubiquitin-protein ligase RBBP6...291.3     35     52     59GO:0005694; C:chromosome; IEA:UniProtKB-SubCell.::GO:0005815; C:microtubule organizing center; IEA:UniProtKB-SubCell.::GO:0005730; C:nucleolus; IEA:UniProtKB-SubCell.
GO:0003676; F:nucleic acid binding; IEA:InterPro.::GO:0005515; F:protein binding; IPI:UniProtKB.::GO:0004842; F:ubiquitin-protein ligase activity; IDA:UniProtKB.::GO:0008270; F:zinc ion binding; IEA:InterPro.
GO:0042787; P:protein ubiquitination involved in ubiquitin-dependent protein catabolic process; IDA:UniProtKB.
186Q9NUD5    404   ZCHC3_HUMAN Zinc finger CCHC domain-containin...561.3     34.7     34     48
GO:0003676; F:nucleic acid binding; IEA:InterPro.::GO:0008270; F:zinc ion binding; IEA:InterPro.
187P34689    763   GLH1_CAEEL ATP-dependent RNA helicase glh-1 O...521.3     34.7     35     50GO:0043186; C:P granule; IDA:WormBase.
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0008026; F:ATP-dependent helicase activity; IEA:InterPro.::GO:0017151; F:DEAD/H-box RNA helicase binding; IPI:WormBase.::GO:0008432; F:JUN kinase binding; IPI:WormBase.::GO:0043621; F:protein self-association; IPI:WormBase.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW.::GO:0003724; F:RNA helicase activity; IDA:WormBase.::GO:0008270; F:zinc ion binding; IEA:InterPro.
GO:0006915; P:apoptotic process; IMP:WormBase.::GO:0007281; P:germ cell development; IMP:WormBase.::GO:0009791; P:post-embryonic development; IMP:WormBase.
188P04022    658   GAG_SRV1 Gag polyprotein OS=Simian retrovirus...451.8     34.3     38     49GO:0019028; C:viral capsid; IEA:UniProtKB-KW.
GO:0003676; F:nucleic acid binding; IEA:UniProtKB-KW.::GO:0005198; F:structural molecule activity; IEA:InterPro.::GO:0008270; F:zinc ion binding; IEA:InterPro.
GO:0044419; P:interspecies interaction between organisms; IEA:UniProtKB-KW.::GO:0016032; P:viral reproduction; IEA:InterPro.
189Q7SDY6    416   SLU7_NEUCR Pre-mRNA-splicing factor slu-7 OS=...312.6     33.5     45     55GO:0005681; C:spliceosomal complex; IEA:UniProtKB-KW.
GO:0003676; F:nucleic acid binding; IEA:InterPro.::GO:0008270; F:zinc ion binding; IEA:InterPro.
GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.::GO:0008380; P:RNA splicing; IEA:UniProtKB-KW.
190Q6XKE6    2180   POLG_PVCV2 Genome polyprotein OS=Petunia vein...232.7     33.9     48     65
GO:0004190; F:aspartic-type endopeptidase activity; IEA:UniProtKB-KW.::GO:0003677; F:DNA binding; IEA:UniProtKB-KW.::GO:0004519; F:endonuclease activity; IEA:UniProtKB-KW.::GO:0003723; F:RNA binding; IEA:InterPro.::GO:0003964; F:RNA-directed DNA polymerase activity; IEA:UniProtKB-KW.::GO:0008270; F:zinc ion binding; IEA:InterPro.
GO:0006508; P:proteolysis; IEA:UniProtKB-KW.::GO:0006278; P:RNA-dependent DNA replication; IEA:InterPro.::GO:0046740; P:spread of virus in host, cell to cell; IEA:UniProtKB-KW.::GO:0006810; P:transport; IEA:UniProtKB-KW.
191Q91DM0    2179   POLG_PVCV1 Genome polyprotein OS=Petunia vein...232.7     33.9     48     65
GO:0004190; F:aspartic-type endopeptidase activity; IEA:UniProtKB-KW.::GO:0003677; F:DNA binding; IEA:UniProtKB-KW.::GO:0004519; F:endonuclease activity; IEA:UniProtKB-KW.::GO:0003723; F:RNA binding; IEA:InterPro.::GO:0003964; F:RNA-directed DNA polymerase activity; IEA:UniProtKB-KW.::GO:0008270; F:zinc ion binding; IEA:InterPro.
GO:0006508; P:proteolysis; IEA:UniProtKB-KW.::GO:0006278; P:RNA-dependent DNA replication; IEA:InterPro.::GO:0046740; P:spread of virus in host, cell to cell; IEA:UniProtKB-KW.::GO:0006810; P:transport; IEA:UniProtKB-KW.
192Q6C187    605   BBP_YARLI Branchpoint-bridging protein OS=lip...222.8     33.9     55     59GO:0005681; C:spliceosomal complex; IEA:UniProtKB-KW.
GO:0003723; F:RNA binding; IEA:UniProtKB-KW.::GO:0008270; F:zinc ion binding; IEA:InterPro.
GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.::GO:0008380; P:RNA splicing; IEA:UniProtKB-KW.
193Q59947    1963   IGA1_STRR6 Immunoglobulin A1 protease OS=Stre...1052.9     33.9     28     45GO:0005618; C:cell wall; IEA:UniProtKB-SubCell.::GO:0005576; C:extracellular region; IEA:UniProtKB-KW.::GO:0016021; C:integral to membrane; IEA:UniProtKB-KW.
GO:0004222; F:metalloendopeptidase activity; IEA:InterPro.::GO:0008270; F:zinc ion binding; IEA:InterPro.
GO:0006508; P:proteolysis; IEA:UniProtKB-KW.
194P63126    666   GAK4_HUMAN HERV-K_6q14.1 provirus ancestral G...233.1     33.5     48     83GO:0005886; C:plasma membrane; IEA:UniProtKB-SubCell.::GO:0019028; C:viral capsid; IEA:InterPro.
GO:0003676; F:nucleic acid binding; IEA:InterPro.::GO:0005198; F:structural molecule activity; IEA:InterPro.::GO:0008270; F:zinc ion binding; IEA:InterPro.
GO:0016032; P:viral reproduction; IEA:InterPro.
195Q9YNA8    666   GAK3_HUMAN HERV-K_19q12 provirus ancestral Ga...233.1     33.5     48     83GO:0005886; C:plasma membrane; IEA:UniProtKB-SubCell.::GO:0019028; C:viral capsid; IEA:InterPro.
GO:0003676; F:nucleic acid binding; IEA:InterPro.::GO:0005198; F:structural molecule activity; IEA:InterPro.::GO:0008270; F:zinc ion binding; IEA:InterPro.
GO:0016032; P:viral reproduction; IEA:InterPro.
196Q9HDB9    667   GAK8_HUMAN HERV-K_3q12.3 provirus ancestral G...542.9     33.9     33     44GO:0005886; C:plasma membrane; IEA:UniProtKB-SubCell.::GO:0019028; C:viral capsid; IEA:InterPro.
GO:0003676; F:nucleic acid binding; IEA:InterPro.::GO:0005198; F:structural molecule activity; IEA:InterPro.::GO:0008270; F:zinc ion binding; IEA:InterPro.
GO:0016032; P:viral reproduction; IEA:InterPro.
197P62683    666   GAK1_HUMAN HERV-K_12q14.1 provirus ancestral ...233.1     33.5     48     83GO:0005886; C:plasma membrane; IEA:UniProtKB-SubCell.::GO:0019028; C:viral capsid; IEA:InterPro.
GO:0003676; F:nucleic acid binding; IEA:InterPro.::GO:0005198; F:structural molecule activity; IEA:InterPro.::GO:0008270; F:zinc ion binding; IEA:InterPro.
GO:0016032; P:viral reproduction; IEA:InterPro.
198P63145    666   GAK11_HUMAN HERV-K_22q11.21 provirus ancestra...233.2     33.5     48     83GO:0005886; C:plasma membrane; IEA:UniProtKB-SubCell.::GO:0019028; C:viral capsid; IEA:InterPro.
GO:0003676; F:nucleic acid binding; IEA:InterPro.::GO:0005198; F:structural molecule activity; IEA:InterPro.::GO:0008270; F:zinc ion binding; IEA:InterPro.
GO:0016032; P:viral reproduction; IEA:InterPro.
199P62684    666   GAK5_HUMAN HERV-K_19p13.11 provirus ancestral...233.2     33.5     48     83GO:0005886; C:plasma membrane; IEA:UniProtKB-SubCell.::GO:0019028; C:viral capsid; IEA:InterPro.
GO:0003676; F:nucleic acid binding; IEA:InterPro.::GO:0005198; F:structural molecule activity; IEA:InterPro.::GO:0008270; F:zinc ion binding; IEA:InterPro.
GO:0016032; P:viral reproduction; IEA:InterPro.
200Q7LDI9    666   GAK2_HUMAN HERV-K_7p22.1 provirus ancestral G...233.3     33.5     48     83GO:0005886; C:plasma membrane; IEA:UniProtKB-SubCell.::GO:0019028; C:viral capsid; IEA:InterPro.
GO:0003676; F:nucleic acid binding; IEA:InterPro.::GO:0005198; F:structural molecule activity; IEA:InterPro.::GO:0008270; F:zinc ion binding; IEA:InterPro.
GO:0016032; P:viral reproduction; IEA:InterPro.
201P63130    666   GAK12_HUMAN HERV-K_1q22 provirus ancestral Ga...533.3     33.5     34     45GO:0005886; C:plasma membrane; IEA:UniProtKB-SubCell.::GO:0019028; C:viral capsid; IEA:InterPro.
GO:0003676; F:nucleic acid binding; IEA:InterPro.::GO:0005198; F:structural molecule activity; IEA:InterPro.::GO:0008270; F:zinc ion binding; IEA:InterPro.
GO:0016032; P:viral reproduction; IEA:InterPro.
202P87889    666   GAK10_HUMAN HERV-K_5q33.3 provirus ancestral ...233.4     33.5     48     83GO:0005886; C:plasma membrane; IEA:UniProtKB-SubCell.::GO:0019028; C:viral capsid; IEA:InterPro.
GO:0003676; F:nucleic acid binding; NAS:UniProtKB.::GO:0005198; F:structural molecule activity; IEA:InterPro.::GO:0008270; F:zinc ion binding; IEA:InterPro.
GO:0016032; P:viral reproduction; IEA:InterPro.
203Q12476    344   AIR2_YEAST Protein AIR2 OS=Saccharomyces cere...583.6     33.1     28     43GO:0005730; C:nucleolus; IDA:SGD.::GO:0031499; C:TRAMP complex; IDA:SGD.
GO:0030674; F:protein binding, bridging; IMP:SGD.::GO:0003723; F:RNA binding; IDA:SGD.::GO:0008270; F:zinc ion binding; IEA:InterPro.
GO:0043629; P:ncRNA polyadenylation; IDA:SGD.::GO:0071039; P:nuclear polyadenylation-dependent CUT catabolic process; IGI:SGD.::GO:0071035; P:nuclear polyadenylation-dependent rRNA catabolic process; IGI:SGD.::GO:0071036; P:nuclear polyadenylation-dependent snoRNA catabolic process; IGI:SGD.::GO:0071037; P:nuclear polyadenylation-dependent snRNA catabolic process; IGI:SGD.::GO:0071038; P:nuclear polyadenylation-dependent tRNA catabolic process; IDA:SGD.::GO:0006400; P:tRNA modification; IMP:SGD.
204P62685    647   GAK6_HUMAN HERV-K_8p23.1 provirus ancestral G...534     33.1     34     45GO:0005886; C:plasma membrane; IEA:UniProtKB-SubCell.::GO:0019028; C:viral capsid; IEA:InterPro.
GO:0003676; F:nucleic acid binding; IEA:InterPro.::GO:0005198; F:structural molecule activity; IEA:InterPro.::GO:0008270; F:zinc ion binding; IEA:InterPro.
GO:0016032; P:viral reproduction; IEA:InterPro.
205Q4R979    364   RBM4_MACFA RNA-binding protein 4 OS=Macaca fa...564.1     33.1     29     46GO:0010494; C:cytoplasmic stress granule; ISS:UniProtKB.::GO:0016607; C:nuclear speck; ISS:UniProtKB.::GO:0005730; C:nucleolus; ISS:UniProtKB.
GO:0035198; F:miRNA binding; ISS:UniProtKB.::GO:0003730; F:mRNA 3'-UTR binding; ISS:UniProtKB.::GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0036002; F:pre-mRNA binding; ISS:UniProtKB.::GO:0008270; F:zinc ion binding; IEA:InterPro.
GO:0030154; P:cell differentiation; IEA:UniProtKB-KW.::GO:0032922; P:circadian regulation of gene expression; ISS:UniProtKB.::GO:0043153; P:entrainment of circadian clock by photoperiod; ISS:UniProtKB.::GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.::GO:0032055; P:negative regulation of translation in response to stress; ISS:UniProtKB.::GO:0035278; P:negative regulation of translation involved in gene silencing by miRNA; ISS:UniProtKB.::GO:0045947; P:negative regulation of translational initiation; ISS:UniProtKB.::GO:0051149; P:positive regulation of muscle cell differentiation; ISS:UniProtKB.::GO:0000381; P:regulation of alternative nuclear mRNA splicing, via spliceosome; ISS:UniProtKB.::GO:0046822; P:regulation of nucleocytoplasmic transport; ISS:UniProtKB.::GO:0008380; P:RNA splicing; IEA:UniProtKB-KW.::GO:0051403; P:stress-activated MAPK cascade; ISS:UniProtKB.
206Q9BWF3    364   RBM4_HUMAN RNA-binding protein 4 OS=Homo sapi...564.1     33.1     29     46GO:0010494; C:cytoplasmic stress granule; IDA:UniProtKB.::GO:0016607; C:nuclear speck; IDA:UniProtKB.::GO:0005730; C:nucleolus; IDA:UniProtKB.
GO:0035198; F:miRNA binding; IDA:UniProtKB.::GO:0003730; F:mRNA 3'-UTR binding; ISS:UniProtKB.::GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0036002; F:pre-mRNA binding; IDA:UniProtKB.::GO:0005515; F:protein binding; IPI:UniProtKB.::GO:0008270; F:zinc ion binding; IEA:InterPro.
GO:0030154; P:cell differentiation; IEA:UniProtKB-KW.::GO:0032922; P:circadian regulation of gene expression; ISS:UniProtKB.::GO:0043153; P:entrainment of circadian clock by photoperiod; ISS:UniProtKB.::GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.::GO:0032055; P:negative regulation of translation in response to stress; IDA:UniProtKB.::GO:0035278; P:negative regulation of translation involved in gene silencing by miRNA; IDA:UniProtKB.::GO:0045947; P:negative regulation of translational initiation; IDA:UniProtKB.::GO:0051149; P:positive regulation of muscle cell differentiation; IDA:UniProtKB.::GO:0000381; P:regulation of alternative nuclear mRNA splicing, via spliceosome; IDA:UniProtKB.::GO:0046822; P:regulation of nucleocytoplasmic transport; IDA:UniProtKB.::GO:0008380; P:RNA splicing; IEA:UniProtKB-KW.::GO:0051403; P:stress-activated MAPK cascade; IDA:UniProtKB.
207Q8C7Q4    361   RBM4_MOUSE RNA-binding protein 4 OS=Mus muscu...564.3     33.1     29     46GO:0010494; C:cytoplasmic stress granule; ISS:UniProtKB.::GO:0016607; C:nuclear speck; ISS:UniProtKB.::GO:0005730; C:nucleolus; IDA:UniProtKB.::GO:0048471; C:perinuclear region of cytoplasm; IDA:UniProtKB.
GO:0035198; F:miRNA binding; ISS:UniProtKB.::GO:0003730; F:mRNA 3'-UTR binding; IDA:UniProtKB.::GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0036002; F:pre-mRNA binding; IDA:UniProtKB.::GO:0008270; F:zinc ion binding; IEA:InterPro.
GO:0030154; P:cell differentiation; IEA:UniProtKB-KW.::GO:0032922; P:circadian regulation of gene expression; IDA:UniProtKB.::GO:0043153; P:entrainment of circadian clock by photoperiod; IDA:UniProtKB.::GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.::GO:0032055; P:negative regulation of translation in response to stress; ISS:UniProtKB.::GO:0035278; P:negative regulation of translation involved in gene silencing by miRNA; ISS:UniProtKB.::GO:0045947; P:negative regulation of translational initiation; ISS:UniProtKB.::GO:0051149; P:positive regulation of muscle cell differentiation; ISS:UniProtKB.::GO:0000381; P:regulation of alternative nuclear mRNA splicing, via spliceosome; ISS:UniProtKB.::GO:0046822; P:regulation of nucleocytoplasmic transport; IDA:UniProtKB.::GO:0008380; P:RNA splicing; IEA:UniProtKB-KW.::GO:0051403; P:stress-activated MAPK cascade; ISS:UniProtKB.
208Q3MHX3    362   RBM4_BOVIN RNA-binding protein 4 OS=Bos tauru...464.4     32.7     35     46GO:0010494; C:cytoplasmic stress granule; ISS:UniProtKB.::GO:0016607; C:nuclear speck; ISS:UniProtKB.::GO:0005730; C:nucleolus; ISS:UniProtKB.
GO:0035198; F:miRNA binding; ISS:UniProtKB.::GO:0003730; F:mRNA 3'-UTR binding; ISS:UniProtKB.::GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0036002; F:pre-mRNA binding; ISS:UniProtKB.::GO:0008270; F:zinc ion binding; IEA:InterPro.
GO:0030154; P:cell differentiation; IEA:UniProtKB-KW.::GO:0032922; P:circadian regulation of gene expression; ISS:UniProtKB.::GO:0043153; P:entrainment of circadian clock by photoperiod; ISS:UniProtKB.::GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.::GO:0032055; P:negative regulation of translation in response to stress; ISS:UniProtKB.::GO:0035278; P:negative regulation of translation involved in gene silencing by miRNA; ISS:UniProtKB.::GO:0045947; P:negative regulation of translational initiation; ISS:UniProtKB.::GO:0051149; P:positive regulation of muscle cell differentiation; ISS:UniProtKB.::GO:0000381; P:regulation of alternative nuclear mRNA splicing, via spliceosome; ISS:UniProtKB.::GO:0046822; P:regulation of nucleocytoplasmic transport; ISS:UniProtKB.::GO:0008380; P:RNA splicing; IEA:UniProtKB-KW.::GO:0051403; P:stress-activated MAPK cascade; ISS:UniProtKB.
209Q966L9    974   GLH2_CAEEL ATP-dependent RNA helicase glh-2 O...524.9     33.1     37     52GO:0043186; C:P granule; IDA:WormBase.
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0008026; F:ATP-dependent helicase activity; IEA:InterPro.::GO:0008432; F:JUN kinase binding; IPI:WormBase.::GO:0043621; F:protein self-association; IPI:WormBase.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW.::GO:0003724; F:RNA helicase activity; IDA:WormBase.::GO:0008270; F:zinc ion binding; IEA:InterPro.
GO:0006915; P:apoptotic process; IMP:WormBase.::GO:0007281; P:germ cell development; IMP:WormBase.::GO:0009791; P:post-embryonic development; IMP:WormBase.
210P63128    1117   POK4_HUMAN HERV-K_6q14.1 provirus ancestral G...535.7     32.7     34     45GO:0005886; C:plasma membrane; IEA:UniProtKB-SubCell.::GO:0019028; C:viral capsid; IEA:InterPro.
GO:0004190; F:aspartic-type endopeptidase activity; IEA:InterPro.::GO:0003887; F:DNA-directed DNA polymerase activity; IEA:EC.::GO:0004523; F:ribonuclease H activity; IEA:EC.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW.::GO:0003964; F:RNA-directed DNA polymerase activity; IEA:UniProtKB-KW.::GO:0005198; F:structural molecule activity; IEA:InterPro.::GO:0008270; F:zinc ion binding; IEA:InterPro.
GO:0046080; P:dUTP metabolic process; IEA:InterPro.::GO:0006508; P:proteolysis; IEA:UniProtKB-KW.::GO:0006278; P:RNA-dependent DNA replication; IEA:InterPro.::GO:0016032; P:viral reproduction; IEA:InterPro.
211Q9BQ04    359   RBM4B_HUMAN RNA-binding protein 4B OS=Homo sa...466.7     32.3     33     46GO:0005730; C:nucleolus; IEA:UniProtKB-SubCell.
GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW.::GO:0008270; F:zinc ion binding; IEA:InterPro.
GO:0032922; P:circadian regulation of gene expression; ISS:UniProtKB.::GO:0043153; P:entrainment of circadian clock by photoperiod; ISS:UniProtKB.::GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.::GO:0006417; P:regulation of translation; ISS:UniProtKB.::GO:0008380; P:RNA splicing; IEA:UniProtKB-KW.
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