Fungal Genome Collection
University of Nebraska Lincoln
School of Biological Sciences and Center for Plant Science Innovation
Home About FGC Use Cases Species List


UniProt_SwissProt BLAST: Single locus
Species:
Agaricus bisporus bisporus H97
Locus:
115872
Length:
84
Number of sequences:
10438
Description:
Genemark.2340_g
rec.SubjectHit LengthDescriptionAlign.LenE valueBit score% ident.  % pos.GO associations
31Q2YN02    245   RNC_BRUA2 Ribonuclease 3 OS=Brucella abortus ...410.2     32.7     44     59GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0003725; F:double-stranded RNA binding; IEA:InterPro.::GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.::GO:0004525; F:ribonuclease III activity; IEA:EC.::GO:0019843; F:rRNA binding; IEA:UniProtKB-KW.
GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.::GO:0016075; P:rRNA catabolic process; IEA:InterPro.::GO:0006364; P:rRNA processing; IEA:UniProtKB-KW.::GO:0008033; P:tRNA processing; IEA:UniProtKB-KW.
32B2SAD9    245   RNC_BRUA1 Ribonuclease 3 OS=Brucella abortus ...410.2     32.7     44     59GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0003725; F:double-stranded RNA binding; IEA:InterPro.::GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.::GO:0004525; F:ribonuclease III activity; IEA:EC.::GO:0019843; F:rRNA binding; IEA:UniProtKB-KW.
GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.::GO:0016075; P:rRNA catabolic process; IEA:InterPro.::GO:0006364; P:rRNA processing; IEA:UniProtKB-KW.::GO:0008033; P:tRNA processing; IEA:UniProtKB-KW.
33Q3A4Q8    232   RNC_PELCD Ribonuclease 3 OS=Pelobacter carbin...410.2     32.7     44     59GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0003725; F:double-stranded RNA binding; IEA:InterPro.::GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.::GO:0004525; F:ribonuclease III activity; IEA:EC.::GO:0019843; F:rRNA binding; IEA:UniProtKB-KW.
GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.::GO:0016075; P:rRNA catabolic process; IEA:InterPro.::GO:0006364; P:rRNA processing; IEA:UniProtKB-KW.::GO:0008033; P:tRNA processing; IEA:UniProtKB-KW.
34Q9NRR4    1374   RNC_HUMAN Ribonuclease 3 OS=Homo sapiens (Hum...420.21     33.1     45     55GO:0005730; C:nucleolus; IEA:UniProtKB-SubCell.::GO:0005654; C:nucleoplasm; TAS:Reactome.
GO:0003725; F:double-stranded RNA binding; IEA:InterPro.::GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.::GO:0005515; F:protein binding; IPI:IntAct.::GO:0004525; F:ribonuclease III activity; TAS:Reactome.
GO:0031047; P:gene silencing by RNA; IEA:UniProtKB-KW.::GO:0042254; P:ribosome biogenesis; IEA:UniProtKB-KW.::GO:0006396; P:RNA processing; IEA:InterPro.::GO:0016075; P:rRNA catabolic process; IEA:InterPro.
35Q91ZS8    711   RED1_MOUSE Double-stranded RNA-specific edita...400.21     33.1     43     58
GO:0003726; F:double-stranded RNA adenosine deaminase activity; ISS:HGNC.::GO:0003725; F:double-stranded RNA binding; ISS:HGNC.::GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.
GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.
36Q5HZJ0    1373   RNC_MOUSE Ribonuclease 3 OS=Mus musculus (Mou...420.22     33.1     45     55GO:0005730; C:nucleolus; IEA:UniProtKB-SubCell.
GO:0003725; F:double-stranded RNA binding; IEA:InterPro.::GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.::GO:0005515; F:protein binding; IPI:UniProtKB.::GO:0004525; F:ribonuclease III activity; IEA:EC.
GO:0010586; P:miRNA metabolic process; IMP:MGI.::GO:0031054; P:pre-miRNA processing; IDA:MGI.::GO:0042254; P:ribosome biogenesis; IEA:UniProtKB-KW.::GO:0016075; P:rRNA catabolic process; IEA:InterPro.
37Q9JI20    745   RED2_MOUSE Double-stranded RNA-specific edita...820.28     32.7     27     40GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0004000; F:adenosine deaminase activity; IEA:InterPro.::GO:0003725; F:double-stranded RNA binding; IEA:InterPro.::GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.
GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.
38Q47S78    240   RNC_THEFY Ribonuclease 3 OS=Thermobifida fusc...460.3     32.3     41     57GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0003725; F:double-stranded RNA binding; IEA:InterPro.::GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.::GO:0004525; F:ribonuclease III activity; IEA:EC.::GO:0019843; F:rRNA binding; IEA:UniProtKB-KW.
GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.::GO:0016075; P:rRNA catabolic process; IEA:InterPro.::GO:0006364; P:rRNA processing; IEA:UniProtKB-KW.::GO:0008033; P:tRNA processing; IEA:UniProtKB-KW.
39Q5M3S3    237   RNC_STRT2 Ribonuclease 3 OS=Streptococcus the...420.32     32     43     60GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0003725; F:double-stranded RNA binding; IEA:InterPro.::GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.::GO:0004525; F:ribonuclease III activity; IEA:EC.::GO:0019843; F:rRNA binding; IEA:UniProtKB-KW.
GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.::GO:0016075; P:rRNA catabolic process; IEA:InterPro.::GO:0006364; P:rRNA processing; IEA:UniProtKB-KW.::GO:0008033; P:tRNA processing; IEA:UniProtKB-KW.
40Q5LZ68    237   RNC_STRT1 Ribonuclease 3 OS=Streptococcus the...420.32     32     43     60GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0003725; F:double-stranded RNA binding; IEA:InterPro.::GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.::GO:0004525; F:ribonuclease III activity; IEA:EC.::GO:0019843; F:rRNA binding; IEA:UniProtKB-KW.
GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.::GO:0016075; P:rRNA catabolic process; IEA:InterPro.::GO:0006364; P:rRNA processing; IEA:UniProtKB-KW.::GO:0008033; P:tRNA processing; IEA:UniProtKB-KW.
41Q9NS39    739   RED2_HUMAN Double-stranded RNA-specific edita...820.38     32.3     27     40GO:0005739; C:mitochondrion; IDA:HPA.::GO:0005634; C:nucleus; IDA:HPA.
GO:0004000; F:adenosine deaminase activity; TAS:ProtInc.::GO:0003725; F:double-stranded RNA binding; TAS:ProtInc.::GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.::GO:0003727; F:single-stranded RNA binding; TAS:ProtInc.
GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.
42A7NGC5    234   RNC_ROSCS Ribonuclease 3 OS=Roseiflexus caste...420.46     31.6     43     57GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0003725; F:double-stranded RNA binding; IEA:InterPro.::GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.::GO:0004525; F:ribonuclease III activity; IEA:EC.::GO:0019843; F:rRNA binding; IEA:UniProtKB-KW.
GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.::GO:0016075; P:rRNA catabolic process; IEA:InterPro.::GO:0006364; P:rRNA processing; IEA:UniProtKB-KW.::GO:0008033; P:tRNA processing; IEA:UniProtKB-KW.
43Q03K17    229   RNC_STRTD Ribonuclease 3 OS=Streptococcus the...420.51     31.6     43     60GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0003725; F:double-stranded RNA binding; IEA:InterPro.::GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.::GO:0004525; F:ribonuclease III activity; IEA:EC.::GO:0019843; F:rRNA binding; IEA:UniProtKB-KW.
GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.::GO:0016075; P:rRNA catabolic process; IEA:InterPro.::GO:0006364; P:rRNA processing; IEA:UniProtKB-KW.::GO:0008033; P:tRNA processing; IEA:UniProtKB-KW.
44A0AJR0    229   RNC_LISW6 Ribonuclease 3 OS=SLCC5334). GN=rnc...650.56     31.6     29     51GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0003725; F:double-stranded RNA binding; IEA:InterPro.::GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.::GO:0004525; F:ribonuclease III activity; IEA:EC.::GO:0019843; F:rRNA binding; IEA:UniProtKB-KW.
GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.::GO:0016075; P:rRNA catabolic process; IEA:InterPro.::GO:0006364; P:rRNA processing; IEA:UniProtKB-KW.::GO:0008033; P:tRNA processing; IEA:UniProtKB-KW.
45B8DDU8    229   RNC_LISMH Ribonuclease 3 OS=Listeria monocyto...650.56     31.6     29     51GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0003725; F:double-stranded RNA binding; IEA:InterPro.::GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.::GO:0004525; F:ribonuclease III activity; IEA:EC.::GO:0019843; F:rRNA binding; IEA:UniProtKB-KW.
GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.::GO:0016075; P:rRNA catabolic process; IEA:InterPro.::GO:0006364; P:rRNA processing; IEA:UniProtKB-KW.::GO:0008033; P:tRNA processing; IEA:UniProtKB-KW.
46P55265    1226   DSRAD_HUMAN Double-stranded RNA-specific aden...410.57     31.6     39     59GO:0005737; C:cytoplasm; TAS:UniProtKB.::GO:0005730; C:nucleolus; IEA:UniProtKB-SubCell.::GO:0005654; C:nucleoplasm; TAS:Reactome.
GO:0003677; F:DNA binding; IEA:UniProtKB-KW.::GO:0003726; F:double-stranded RNA adenosine deaminase activity; NAS:UniProtKB.::GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.
GO:0006382; P:adenosine to inosine editing; TAS:Reactome.::GO:0031047; P:gene silencing by RNA; IEA:UniProtKB-KW.::GO:0016556; P:mRNA modification; TAS:Reactome.::GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.::GO:0060337; P:type I interferon-mediated signaling pathway; TAS:Reactome.
47Q71YL2    229   RNC_LISMF Ribonuclease 3 OS=Listeria monocyto...650.57     31.6     29     51GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0003725; F:double-stranded RNA binding; IEA:InterPro.::GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.::GO:0004525; F:ribonuclease III activity; IEA:EC.::GO:0019843; F:rRNA binding; IEA:UniProtKB-KW.
GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.::GO:0016075; P:rRNA catabolic process; IEA:InterPro.::GO:0006364; P:rRNA processing; IEA:UniProtKB-KW.::GO:0008033; P:tRNA processing; IEA:UniProtKB-KW.
48C1KWA4    229   RNC_LISMC Ribonuclease 3 OS=Listeria monocyto...650.57     31.6     29     51GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0003725; F:double-stranded RNA binding; IEA:InterPro.::GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.::GO:0004525; F:ribonuclease III activity; IEA:EC.::GO:0019843; F:rRNA binding; IEA:UniProtKB-KW.
GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.::GO:0016075; P:rRNA catabolic process; IEA:InterPro.::GO:0006364; P:rRNA processing; IEA:UniProtKB-KW.::GO:0008033; P:tRNA processing; IEA:UniProtKB-KW.
49Q92AK3    229   RNC_LISIN Ribonuclease 3 OS=Listeria innocua ...650.58     31.2     29     51GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0003725; F:double-stranded RNA binding; IEA:InterPro.::GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.::GO:0004525; F:ribonuclease III activity; IEA:EC.::GO:0019843; F:rRNA binding; IEA:UniProtKB-KW.
GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.::GO:0016075; P:rRNA catabolic process; IEA:InterPro.::GO:0006364; P:rRNA processing; IEA:UniProtKB-KW.::GO:0008033; P:tRNA processing; IEA:UniProtKB-KW.
50Q8Y691    229   RNC_LISMO Ribonuclease 3 OS=Listeria monocyto...650.59     31.2     29     51GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0003725; F:double-stranded RNA binding; IEA:InterPro.::GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.::GO:0004525; F:ribonuclease III activity; IEA:EC.::GO:0019843; F:rRNA binding; IEA:UniProtKB-KW.
GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.::GO:0016075; P:rRNA catabolic process; IEA:InterPro.::GO:0006364; P:rRNA processing; IEA:UniProtKB-KW.::GO:0008033; P:tRNA processing; IEA:UniProtKB-KW.
51Q6NXA4    833   ILF3_DANRE Interleukin enhancer-binding facto...400.66     31.6     40     55GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0003677; F:DNA binding; IEA:UniProtKB-KW.::GO:0003725; F:double-stranded RNA binding; IEA:InterPro.
GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
52Q3ZXY9    237   RNC_DEHSC Ribonuclease 3 OS=Dehalococcoides s...430.7     31.2     37     49GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0003725; F:double-stranded RNA binding; IEA:InterPro.::GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.::GO:0004525; F:ribonuclease III activity; IEA:EC.::GO:0019843; F:rRNA binding; IEA:UniProtKB-KW.
GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.::GO:0016075; P:rRNA catabolic process; IEA:InterPro.::GO:0006364; P:rRNA processing; IEA:UniProtKB-KW.::GO:0008033; P:tRNA processing; IEA:UniProtKB-KW.
53B4RCU4    238   RNC_PHEZH Ribonuclease 3 OS=Phenylobacterium ...430.74     31.2     49     56GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0003725; F:double-stranded RNA binding; IEA:InterPro.::GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.::GO:0004525; F:ribonuclease III activity; IEA:EC.::GO:0019843; F:rRNA binding; IEA:UniProtKB-KW.
GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.::GO:0016075; P:rRNA catabolic process; IEA:InterPro.::GO:0006364; P:rRNA processing; IEA:UniProtKB-KW.::GO:0008033; P:tRNA processing; IEA:UniProtKB-KW.
54B9DPJ2    242   RNC_STACT Ribonuclease 3 OS=Staphylococcus ca...400.81     30.8     35     55GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0003725; F:double-stranded RNA binding; IEA:InterPro.::GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.::GO:0004525; F:ribonuclease III activity; IEA:EC.::GO:0019843; F:rRNA binding; IEA:UniProtKB-KW.
GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.::GO:0016075; P:rRNA catabolic process; IEA:InterPro.::GO:0006364; P:rRNA processing; IEA:UniProtKB-KW.::GO:0008033; P:tRNA processing; IEA:UniProtKB-KW.
55Q8H1D4    355   DRB4_ARATH Double-stranded RNA-binding protei...620.98     30.8     31     44GO:0005634; C:nucleus; IDA:TAIR.
GO:0003725; F:double-stranded RNA binding; IDA:TAIR.::GO:0005515; F:protein binding; IPI:UniProtKB.
GO:0010267; P:production of ta-siRNAs involved in RNA interference; IMP:TAIR.::GO:0060145; P:viral gene silencing in virus induced gene silencing; IMP:UniProtKB.
56Q6DD04    898   ILF3B_XENLA Interleukin enhancer-binding fact...401     30.8     40     53GO:0005737; C:cytoplasm; ISS:UniProtKB.::GO:0005634; C:nucleus; ISS:UniProtKB.::GO:0005844; C:polysome; IDA:UniProtKB.
GO:0003725; F:double-stranded RNA binding; ISS:UniProtKB.::GO:0048027; F:mRNA 5'-UTR binding; ISS:UniProtKB.::GO:0043565; F:sequence-specific DNA binding; ISS:UniProtKB.::GO:0044212; F:transcription regulatory region DNA binding; ISS:UniProtKB.
GO:0007275; P:multicellular organismal development; IEA:UniProtKB-KW.::GO:0006357; P:regulation of transcription from RNA polymerase II promoter; ISS:UniProtKB.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
57Q8GY79    393   DRB5_ARATH Double-stranded RNA-binding protei...731.1     30.8     27     44GO:0005622; C:intracellular; IEA:InterPro.
GO:0003725; F:double-stranded RNA binding; IDA:TAIR.::GO:0005515; F:protein binding; IPI:UniProtKB.::GO:0004525; F:ribonuclease III activity; IEA:InterPro.
GO:0016075; P:rRNA catabolic process; IEA:InterPro.
58Q9JIL3    897   ILF3_RAT Interleukin enhancer-binding factor ...401.2     30.8     40     53GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.::GO:0005730; C:nucleolus; IEA:UniProtKB-SubCell.::GO:0030529; C:ribonucleoprotein complex; ISS:UniProtKB.
GO:0003677; F:DNA binding; IEA:UniProtKB-KW.::GO:0003725; F:double-stranded RNA binding; IEA:InterPro.::GO:0019899; F:enzyme binding; IPI:RGD.::GO:0003700; F:sequence-specific DNA binding transcription factor activity; TAS:RGD.
GO:0006479; P:protein methylation; IDA:MGI.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
59Q3Z7Q8    237   RNC_DEHE1 Ribonuclease 3 OS=Dehalococcoides e...431.2     30.4     37     49GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0003725; F:double-stranded RNA binding; IEA:InterPro.::GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.::GO:0004525; F:ribonuclease III activity; IEA:EC.::GO:0019843; F:rRNA binding; IEA:UniProtKB-KW.
GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.::GO:0016075; P:rRNA catabolic process; IEA:InterPro.::GO:0006364; P:rRNA processing; IEA:UniProtKB-KW.::GO:0008033; P:tRNA processing; IEA:UniProtKB-KW.
60Q12906    894   ILF3_HUMAN Interleukin enhancer-binding facto...401.3     30.4     40     53GO:0005739; C:mitochondrion; IDA:HPA.::GO:0005730; C:nucleolus; IEA:UniProtKB-SubCell.::GO:0030529; C:ribonucleoprotein complex; IDA:UniProtKB.
GO:0003677; F:DNA binding; IDA:UniProtKB.::GO:0003725; F:double-stranded RNA binding; IDA:UniProtKB.::GO:0005515; F:protein binding; IPI:UniProtKB.
GO:0000279; P:M phase; NAS:UniProtKB.::GO:0045892; P:negative regulation of transcription, DNA-dependent; IDA:UniProtKB.::GO:0045893; P:positive regulation of transcription, DNA-dependent; IDA:UniProtKB.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
61Q91550    897   ILF3A_XENLA Interleukin enhancer-binding fact...401.4     30.4     38     53GO:0005737; C:cytoplasm; IDA:UniProtKB.::GO:0005634; C:nucleus; IDA:UniProtKB.::GO:0030529; C:ribonucleoprotein complex; IDA:UniProtKB.
GO:0003725; F:double-stranded RNA binding; IDA:UniProtKB.::GO:0048027; F:mRNA 5'-UTR binding; IDA:UniProtKB.::GO:0043565; F:sequence-specific DNA binding; IDA:UniProtKB.::GO:0044212; F:transcription regulatory region DNA binding; IDA:UniProtKB.
GO:0007275; P:multicellular organismal development; IEA:UniProtKB-KW.::GO:0006357; P:regulation of transcription from RNA polymerase II promoter; IDA:UniProtKB.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
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