Fungal Genome Collection
University of Nebraska Lincoln
School of Biological Sciences and Center for Plant Science Innovation
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UniProt_SwissProt BLAST: Single locus
Species:
Agaricus bisporus bisporus H97
Locus:
114687
Length:
369
Number of sequences:
10438
Description:
Genemark.1155_g
rec.SubjectHit LengthDescriptionAlign.LenE valueBit score% ident.  % pos.GO associations
211Q7M732    1744   RTL1_MOUSE Retrotransposon-like protein 1 OS=...1142.7     33.9     22     47GO:0016021; C:integral to membrane; IEA:UniProtKB-KW.
GO:0007275; P:multicellular organismal development; IEA:UniProtKB-KW.
212Q9BDY9    359   RBM4_RABIT RNA-binding protein 4 OS=Oryctolag...562.7     33.5     29     48GO:0010494; C:cytoplasmic stress granule; ISS:UniProtKB.::GO:0016607; C:nuclear speck; ISS:UniProtKB.::GO:0005730; C:nucleolus; ISS:UniProtKB.
GO:0035198; F:miRNA binding; ISS:UniProtKB.::GO:0003730; F:mRNA 3'-UTR binding; ISS:UniProtKB.::GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0036002; F:pre-mRNA binding; ISS:UniProtKB.::GO:0008270; F:zinc ion binding; IEA:InterPro.
GO:0030154; P:cell differentiation; IEA:UniProtKB-KW.::GO:0032922; P:circadian regulation of gene expression; ISS:UniProtKB.::GO:0043153; P:entrainment of circadian clock by photoperiod; ISS:UniProtKB.::GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.::GO:0032055; P:negative regulation of translation in response to stress; ISS:UniProtKB.::GO:0035278; P:negative regulation of translation involved in gene silencing by miRNA; ISS:UniProtKB.::GO:0045947; P:negative regulation of translational initiation; ISS:UniProtKB.::GO:0051149; P:positive regulation of muscle cell differentiation; ISS:UniProtKB.::GO:0000381; P:regulation of alternative nuclear mRNA splicing, via spliceosome; ISS:UniProtKB.::GO:0046822; P:regulation of nucleocytoplasmic transport; ISS:UniProtKB.::GO:0008380; P:RNA splicing; IEA:UniProtKB-KW.::GO:0051403; P:stress-activated MAPK cascade; ISS:UniProtKB.
213Q38896    201   GRP2B_ARATH Glycine-rich protein 2b OS=Arabid...613     32.7     26     41GO:0005829; C:cytosol; IDA:TAIR.::GO:0005634; C:nucleus; IDA:TAIR.
GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW.::GO:0008270; F:zinc ion binding; IEA:InterPro.
GO:0009790; P:embryo development; IMP:TAIR.::GO:0010154; P:fruit development; IMP:TAIR.::GO:0006355; P:regulation of transcription, DNA-dependent; IEA:InterPro.
214P04146    1409   COPIA_DROME Copia protein OS=Drosophila melan...363.2     33.9     42     56
GO:0004190; F:aspartic-type endopeptidase activity; IEA:UniProtKB-KW.::GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0003676; F:nucleic acid binding; IEA:InterPro.::GO:0008270; F:zinc ion binding; IEA:InterPro.
GO:0015074; P:DNA integration; IEA:InterPro.::GO:0006508; P:proteolysis; IEA:UniProtKB-KW.
215P31622    612   GAG_JSRV Gag polyprotein OS=(JSRV). GN=gag ...503.3     33.5     34     46GO:0019028; C:viral capsid; IEA:UniProtKB-KW.
GO:0003676; F:nucleic acid binding; IEA:UniProtKB-KW.::GO:0005198; F:structural molecule activity; IEA:InterPro.::GO:0008270; F:zinc ion binding; IEA:InterPro.
GO:0044419; P:interspecies interaction between organisms; IEA:UniProtKB-KW.::GO:0016032; P:viral reproduction; IEA:InterPro.
216P0CO44    546   BBP_CRYNJ Branchpoint-bridging protein OS=ATC...433.7     33.5     33     51GO:0005681; C:spliceosomal complex; IEA:UniProtKB-KW.
GO:0003723; F:RNA binding; IEA:UniProtKB-KW.::GO:0008270; F:zinc ion binding; IEA:InterPro.
GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.::GO:0008380; P:RNA splicing; IEA:UniProtKB-KW.
217P0CO45    546   BBP_CRYNB Branchpoint-bridging protein OS=(Fi...433.7     33.5     33     51GO:0005681; C:spliceosomal complex; IEA:UniProtKB-KW.
GO:0003723; F:RNA binding; IEA:UniProtKB-KW.::GO:0008270; F:zinc ion binding; IEA:InterPro.
GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.::GO:0008380; P:RNA splicing; IEA:UniProtKB-KW.
218P24147    218   CAPSD_CMVWL Capsid protein OS=Cucumber mosaic...844.3     32.3     26     42GO:0030529; C:ribonucleoprotein complex; IEA:UniProtKB-KW.::GO:0019028; C:viral capsid; IEA:UniProtKB-KW.
GO:0003723; F:RNA binding; IEA:UniProtKB-KW.::GO:0005198; F:structural molecule activity; IEA:InterPro.
219P34689    763   GLH1_CAEEL ATP-dependent RNA helicase glh-1 O...524.6     33.1     33     52GO:0043186; C:P granule; IDA:WormBase.
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0008026; F:ATP-dependent helicase activity; IEA:InterPro.::GO:0017151; F:DEAD/H-box RNA helicase binding; IPI:WormBase.::GO:0008432; F:JUN kinase binding; IPI:WormBase.::GO:0043621; F:protein self-association; IPI:WormBase.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW.::GO:0003724; F:RNA helicase activity; IDA:WormBase.::GO:0008270; F:zinc ion binding; IEA:InterPro.
GO:0006915; P:apoptotic process; IMP:WormBase.::GO:0007281; P:germ cell development; IMP:WormBase.::GO:0009791; P:post-embryonic development; IMP:WormBase.
220Q5AED9    455   BBP_CANAL Branchpoint-bridging protein OS=Can...434.9     32.7     33     70GO:0005681; C:spliceosomal complex; IEA:UniProtKB-KW.
GO:0003723; F:RNA binding; IEA:UniProtKB-KW.::GO:0008270; F:zinc ion binding; IEA:InterPro.
GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.::GO:0008380; P:RNA splicing; IEA:UniProtKB-KW.
221Q06934    218   CAPSD_CMVKI Capsid protein OS=Cucumber mosaic...845.5     32.3     26     42GO:0030529; C:ribonucleoprotein complex; IEA:UniProtKB-KW.::GO:0019028; C:viral capsid; IEA:UniProtKB-KW.
GO:0003723; F:RNA binding; IEA:UniProtKB-KW.::GO:0005198; F:structural molecule activity; IEA:InterPro.
222P03605    218   CAPSD_CMVQ Capsid protein OS=Cucumber mosaic ...845.6     32.3     26     42GO:0030529; C:ribonucleoprotein complex; IEA:UniProtKB-KW.::GO:0019028; C:viral capsid; IEA:UniProtKB-KW.
GO:0003723; F:RNA binding; IEA:UniProtKB-KW.::GO:0005198; F:structural molecule activity; IEA:InterPro.
223P0CL89    1130   XRN2_CRYNB 5'-3' exoribonuclease 2 OS=(Filoba...296     32.7     45     48GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0004534; F:5'-3' exoribonuclease activity; IEA:InterPro.::GO:0003676; F:nucleic acid binding; IEA:InterPro.::GO:0008270; F:zinc ion binding; IEA:InterPro.
GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.::GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0006364; P:rRNA processing; IEA:UniProtKB-KW.::GO:0006353; P:transcription termination, DNA-dependent; IEA:UniProtKB-KW.
224P0CL88    1127   XRN2_CRYNJ 5'-3' exoribonuclease 2 OS=ATCC MY...296.2     32.7     45     48GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0004534; F:5'-3' exoribonuclease activity; IEA:InterPro.::GO:0003676; F:nucleic acid binding; IEA:InterPro.::GO:0008270; F:zinc ion binding; IEA:InterPro.
GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.::GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0006364; P:rRNA processing; IEA:UniProtKB-KW.::GO:0006353; P:transcription termination, DNA-dependent; IEA:UniProtKB-KW.
225Q66283    1372   CP_CSVMV Putative Polyprotein CP OS=Cassava v...196.4     32.7     53     84GO:0019028; C:viral capsid; IEA:UniProtKB-KW.
GO:0003676; F:nucleic acid binding; IEA:InterPro.::GO:0008270; F:zinc ion binding; IEA:InterPro.
GO:0006810; P:transport; IEA:InterPro.
226Q66114    218   CAPSD_CMVDK Capsid protein OS=Cucumber mosaic...847     32     26     42GO:0030529; C:ribonucleoprotein complex; IEA:UniProtKB-KW.::GO:0019028; C:viral capsid; IEA:UniProtKB-KW.
GO:0003723; F:RNA binding; IEA:UniProtKB-KW.::GO:0005198; F:structural molecule activity; IEA:InterPro.
227O72620    218   CAPSD_CMVS Capsid protein OS=Cucumber mosaic ...847.9     31.6     26     42GO:0030529; C:ribonucleoprotein complex; IEA:UniProtKB-KW.::GO:0019028; C:viral capsid; IEA:UniProtKB-KW.
GO:0003723; F:RNA binding; IEA:UniProtKB-KW.::GO:0005198; F:structural molecule activity; IEA:InterPro.
228Q7SDY6    416   SLU7_NEUCR Pre-mRNA-splicing factor slu-7 OS=...318     32     42     55GO:0005681; C:spliceosomal complex; IEA:UniProtKB-KW.
GO:0003676; F:nucleic acid binding; IEA:InterPro.::GO:0008270; F:zinc ion binding; IEA:InterPro.
GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.::GO:0008380; P:RNA splicing; IEA:UniProtKB-KW.
229Q09575    1268   YRD6_CAEEL Uncharacterized protein K02A2.6 OS...179.8     32     71     71
GO:0003723; F:RNA binding; IEA:InterPro.::GO:0003964; F:RNA-directed DNA polymerase activity; IEA:InterPro.::GO:0008270; F:zinc ion binding; IEA:InterPro.
GO:0015074; P:DNA integration; IEA:InterPro.::GO:0006278; P:RNA-dependent DNA replication; IEA:InterPro.
230A1L2T6    563   ZCHC7_XENLA Zinc finger CCHC domain-containin...449.8     32     39     45
GO:0003676; F:nucleic acid binding; IEA:InterPro.::GO:0008270; F:zinc ion binding; IEA:InterPro.
records
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