rec. | Subject | Hit Length | Description | Align.Len | E value | Bit score | % ident. | % pos. | GO associations |
1 | Q9Y7Y3 | 233 | YGR4_SCHPO Uncharacterized RNA-binding protei... | 113 | 2e-21 | 95.9 | 44 | 65 | GO:0005730; C:nucleolus; IDA:PomBase. | | | | | | | | | | GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW. | | | | | | | | | | GO:0042254; P:ribosome biogenesis; ISS:PomBase. | 2 | Q07623 | 225 | NOP6_YEAST Nucleolar protein 6 OS=Saccharomyc... | 126 | 0.0000000000005 | 71.6 | 37 | 55 | GO:0030686; C:90S preribosome; IDA:SGD.::GO:0005730; C:nucleolus; IDA:SGD. | | | | | | | | | | GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0019843; F:rRNA binding; IDA:SGD. | | | | | | | | | | GO:0042274; P:ribosomal small subunit biogenesis; IGI:SGD.::GO:0006364; P:rRNA processing; IEA:UniProtKB-KW. | 3 | P53883 | 403 | NOP13_YEAST Nucleolar protein 13 OS=Saccharom... | 100 | 0.13 | 38.1 | 25 | 48 | GO:0005730; C:nucleolus; IDA:SGD.::GO:0030684; C:preribosome; IDA:SGD. | | | | | | | | | | GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW. | | | | | | | | | | | 4 | B0BNE4 | 269 | EPAB2_RAT Embryonic polyadenylate-binding pro... | 77 | 0.000007 | 50.8 | 32 | 57 | GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell. | | | | | | | | | | GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW. | | | | | | | | | | | 5 | Q6TY21 | 218 | EPA2B_XENLA Embryonic polyadenylate-binding p... | 77 | 0.00001 | 49.3 | 30 | 52 | GO:0005737; C:cytoplasm; IDA:UniProtKB. | | | | | | | | | | GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0008143; F:poly(A) RNA binding; IDA:UniProtKB. | | | | | | | | | | | 6 | Q54ZS8 | 222 | PABP2_DICDI Polyadenylate-binding protein 2 O... | 77 | 0.00002 | 49.3 | 29 | 55 | GO:0005737; C:cytoplasm; ISS:UniProtKB.::GO:0005634; C:nucleus; IEA:UniProtKB-SubCell. | | | | | | | | | | GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0008143; F:poly(A) RNA binding; ISS:UniProtKB. | | | | | | | | | | GO:0006378; P:mRNA polyadenylation; ISS:UniProtKB. | 7 | A6NDY0 | 278 | EPAB2_HUMAN Embryonic polyadenylate-binding p... | 77 | 0.00002 | 49.7 | 32 | 55 | GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell. | | | | | | | | | | GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW. | | | | | | | | | | | 8 | Q8CCS6 | 302 | PABP2_MOUSE Polyadenylate-binding protein 2 O... | 88 | 0.00002 | 49.3 | 31 | 55 | GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.::GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.::GO:0030529; C:ribonucleoprotein complex; ISS:UniProtKB. | | | | | | | | | | GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0008143; F:poly(A) RNA binding; TAS:MGI. | | | | | | | | | | GO:0006378; P:mRNA polyadenylation; TAS:MGI. | 9 | Q28165 | 306 | PABP2_BOVIN Polyadenylate-binding protein 2 O... | 88 | 0.00002 | 49.3 | 31 | 55 | GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.::GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.::GO:0030529; C:ribonucleoprotein complex; ISS:UniProtKB. | | | | | | | | | | GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW. | | | | | | | | | | GO:0006397; P:mRNA processing; IEA:UniProtKB-KW. | 10 | Q86U42 | 306 | PABP2_HUMAN Polyadenylate-binding protein 2 O... | 88 | 0.00003 | 49.3 | 31 | 55 | GO:0005737; C:cytoplasm; IDA:HPA.::GO:0005654; C:nucleoplasm; TAS:Reactome.::GO:0030529; C:ribonucleoprotein complex; IDA:UniProtKB. | | | | | | | | | | GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0005515; F:protein binding; IPI:UniProtKB.::GO:0003723; F:RNA binding; TAS:ProtInc. | | | | | | | | | | GO:0046778; P:modification by virus of host mRNA processing; TAS:Reactome.::GO:0031124; P:mRNA 3'-end processing; TAS:Reactome.::GO:0006936; P:muscle contraction; TAS:ProtInc.::GO:0000398; P:nuclear mRNA splicing, via spliceosome; TAS:Reactome.::GO:0016973; P:poly(A)+ mRNA export from nucleus; IMP:UniProtKB.::GO:0006369; P:termination of RNA polymerase II transcription; TAS:Reactome.::GO:0019058; P:viral infectious cycle; TAS:Reactome. | 11 | Q7ZXB8 | 295 | PAB2B_XENLA Polyadenylate-binding protein 2-B... | 88 | 0.00003 | 48.9 | 30 | 55 | GO:0005737; C:cytoplasm; ISS:UniProtKB.::GO:0005634; C:nucleus; ISS:UniProtKB. | | | | | | | | | | GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0008143; F:poly(A) RNA binding; ISS:UniProtKB. | | | | | | | | | | GO:0006378; P:mRNA polyadenylation; ISS:UniProtKB. | 12 | P42696 | 430 | RBM34_HUMAN RNA-binding protein 34 OS=Homo sa... | 77 | 0.00003 | 49.3 | 34 | 51 | GO:0005730; C:nucleolus; IDA:HPA. | | | | | | | | | | GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW. | | | | | | | | | | | 13 | Q9DDY9 | 296 | PAB2A_XENLA Polyadenylate-binding protein 2-A... | 88 | 0.00004 | 48.9 | 30 | 53 | GO:0005737; C:cytoplasm; ISS:UniProtKB.::GO:0005634; C:nucleus; IDA:UniProtKB. | | | | | | | | | | GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0008143; F:poly(A) RNA binding; ISS:UniProtKB. | | | | | | | | | | GO:0006378; P:mRNA polyadenylation; ISS:UniProtKB. | 14 | Q6NVP7 | 296 | PABP2_XENTR Polyadenylate-binding protein 2 O... | 88 | 0.00005 | 48.5 | 30 | 55 | GO:0005737; C:cytoplasm; ISS:UniProtKB.::GO:0005634; C:nucleus; ISS:UniProtKB. | | | | | | | | | | GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0008143; F:poly(A) RNA binding; ISS:UniProtKB. | | | | | | | | | | GO:0006378; P:mRNA polyadenylation; ISS:UniProtKB. | 15 | Q804A5 | 218 | EPA2A_XENLA Embryonic polyadenylate-binding p... | 77 | 0.00005 | 47.8 | 30 | 51 | GO:0005737; C:cytoplasm; IDA:UniProtKB. | | | | | | | | | | GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0008143; F:poly(A) RNA binding; IDA:UniProtKB. | | | | | | | | | | | 16 | Q5XFR0 | 273 | EPAB2_MOUSE Embryonic polyadenylate-binding p... | 77 | 0.0001 | 47.4 | 32 | 53 | GO:0005737; C:cytoplasm; ISS:UniProtKB. | | | | | | | | | | GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0008143; F:poly(A) RNA binding; ISS:UniProtKB. | | | | | | | | | | | 17 | Q7KNF2 | 224 | PABP2_DROME Polyadenylate-binding protein 2 O... | 88 | 0.0001 | 46.6 | 27 | 55 | GO:0071013; C:catalytic step 2 spliceosome; IDA:FlyBase.::GO:0005737; C:cytoplasm; IDA:UniProtKB.::GO:0071011; C:precatalytic spliceosome; IDA:FlyBase. | | | | | | | | | | GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0008143; F:poly(A) RNA binding; IDA:UniProtKB.::GO:0005515; F:protein binding; IPI:UniProtKB. | | | | | | | | | | GO:0006378; P:mRNA polyadenylation; IDA:UniProtKB.::GO:0000398; P:nuclear mRNA splicing, via spliceosome; IC:FlyBase.::GO:0000289; P:nuclear-transcribed mRNA poly(A) tail shortening; IMP:FlyBase. | 18 | Q28ZX3 | 225 | PABP2_DROPS Polyadenylate-binding protein 2 O... | 88 | 0.0002 | 46.2 | 27 | 55 | GO:0005737; C:cytoplasm; ISS:UniProtKB.::GO:0005634; C:nucleus; ISS:UniProtKB. | | | | | | | | | | GO:0042802; F:identical protein binding; ISS:UniProtKB.::GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0008143; F:poly(A) RNA binding; ISS:UniProtKB. | | | | | | | | | | GO:0006378; P:mRNA polyadenylation; ISS:UniProtKB. | 19 | Q5M9F1 | 428 | RBM34_RAT RNA-binding protein 34 OS=Rattus no... | 77 | 0.0005 | 45.4 | 30 | 49 | GO:0005730; C:nucleolus; IEA:UniProtKB-SubCell. | | | | | | | | | | GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW. | | | | | | | | | | | 20 | O89086 | 153 | RBM3_MOUSE Putative RNA-binding protein 3 OS=... | 79 | 0.0006 | 43.5 | 28 | 54 | GO:0005737; C:cytoplasm; ISS:UniProtKB.::GO:0030425; C:dendrite; ISS:UniProtKB.::GO:0005634; C:nucleus; ISS:UniProtKB. | | | | | | | | | | GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0043023; F:ribosomal large subunit binding; IPI:MGI.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW. | | | | | | | | | | GO:0045727; P:positive regulation of translation; ISS:UniProtKB.::GO:0035196; P:production of miRNAs involved in gene silencing by miRNA; IDA:MGI.::GO:0009409; P:response to cold; IDA:MGI.::GO:0006412; P:translation; IDA:MGI. | 21 | P98179 | 157 | RBM3_HUMAN Putative RNA-binding protein 3 OS=... | 79 | 0.0009 | 43.1 | 28 | 54 | GO:0030425; C:dendrite; ISS:UniProtKB.::GO:0005634; C:nucleus; ISS:UniProtKB. | | | | | | | | | | GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0003723; F:RNA binding; TAS:ProtInc. | | | | | | | | | | GO:0045727; P:positive regulation of translation; ISS:UniProtKB. | 22 | Q925G0 | 155 | RBM3_RAT Putative RNA-binding protein 3 OS=Ra... | 79 | 0.001 | 42.7 | 27 | 53 | GO:0005737; C:cytoplasm; IDA:UniProtKB.::GO:0030425; C:dendrite; IDA:UniProtKB.::GO:0005634; C:nucleus; IDA:UniProtKB. | | | | | | | | | | GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0005515; F:protein binding; IPI:UniProtKB.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW. | | | | | | | | | | GO:0045727; P:positive regulation of translation; IDA:UniProtKB. | 23 | Q8C5L7 | 375 | RBM34_MOUSE RNA-binding protein 34 OS=Mus mus... | 77 | 0.002 | 43.5 | 30 | 49 | GO:0005730; C:nucleolus; IEA:UniProtKB-SubCell. | | | | | | | | | | GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW. | | | | | | | | | | | 24 | Q42404 | 427 | RU17_ARATH U1 small nuclear ribonucleoprotein... | 83 | 0.003 | 43.1 | 29 | 51 | GO:0005634; C:nucleus; IDA:TAIR.::GO:0030529; C:ribonucleoprotein complex; IEA:UniProtKB-KW. | | | | | | | | | | GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0005515; F:protein binding; IPI:IntAct.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW. | | | | | | | | | | GO:0000398; P:nuclear mRNA splicing, via spliceosome; IDA:TAIR. | 25 | Q75BJ7 | 426 | NOP12_ASHGO Nucleolar protein 12 OS=Y-1056) (... | 124 | 0.003 | 43.1 | 24 | 45 | GO:0005730; C:nucleolus; IEA:UniProtKB-SubCell. | | | | | | | | | | GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW. | | | | | | | | | | GO:0006364; P:rRNA processing; IEA:UniProtKB-KW. | 26 | Q09301 | 197 | YQOC_CAEEL Putative RNA-binding protein EEED8... | 77 | 0.004 | 42 | 29 | 53 | | | | | | | | | | | GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW. | | | | | | | | | | | 27 | O14327 | 166 | PAB2_SCHPO Polyadenylate-binding protein 2 OS... | 132 | 0.007 | 40.8 | 25 | 50 | GO:0005634; C:nucleus; IDA:PomBase. | | | | | | | | | | GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0008143; F:poly(A) RNA binding; IDA:PomBase.::GO:0005515; F:protein binding; IPI:PomBase. | | | | | | | | | | GO:0000289; P:nuclear-transcribed mRNA poly(A) tail shortening; IMP:PomBase. | 28 | Q09295 | 191 | YQO4_CAEEL Putative RNA-binding protein EEED8... | 77 | 0.007 | 40.8 | 29 | 53 | | | | | | | | | | | GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW. | | | | | | | | | | | 29 | Q09100 | 369 | RNP24_SCHPO RNA-binding protein rnp24 OS=Schi... | 70 | 0.011 | 41.2 | 33 | 54 | GO:0005730; C:nucleolus; IDA:PomBase. | | | | | | | | | | GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0003723; F:RNA binding; ISS:PomBase. | | | | | | | | | | GO:0006364; P:rRNA processing; ISS:PomBase. | 30 | B4NB54 | 154 | NCBP2_DROWI Nuclear cap-binding protein subun... | 83 | 0.012 | 39.7 | 30 | 51 | GO:0005634; C:nucleus; IEA:UniProtKB-SubCell. | | | | | | | | | | GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW. | | | | | | | | | | GO:0031047; P:gene silencing by RNA; IEA:UniProtKB-KW.::GO:0006370; P:mRNA capping; IEA:UniProtKB-KW.::GO:0008380; P:RNA splicing; IEA:UniProtKB-KW. | 31 | P0CR16 | 769 | MRD1_CRYNJ Multiple RNA-binding domain-contai... | 79 | 0.71 | 35.8 | 29 | 52 | GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.::GO:0030529; C:ribonucleoprotein complex; IEA:UniProtKB-KW. | | | | | | | | | | GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW. | | | | | | | | | | GO:0006364; P:rRNA processing; IEA:UniProtKB-KW. |