| rec. | Subject | Hit Length | Description | Align.Len | E value | Bit score | % ident. | % pos. | GO associations |
31 | P07273 | 309 | TFS2_YEAST Transcription elongation factor S-... | 73 | 0.14 | 34.7 | 30 | 45 | GO:0005634; C:nucleus; IDA:SGD. | | | | | | | | | | GO:0001139; F:core RNA polymerase II recruiting transcription factor activity; IMP:SGD.::GO:0000993; F:RNA polymerase II core binding; IPI:SGD.::GO:0001012; F:RNA polymerase II regulatory region DNA binding; IDA:SGD.::GO:0003746; F:translation elongation factor activity; IEA:InterPro.::GO:0008270; F:zinc ion binding; IEA:InterPro. | | | | | | | | | | GO:0001193; P:maintenance of transcriptional fidelity during DNA-dependent transcription elongation from RNA polymerase II promoter; IMP:SGD.::GO:0006379; P:mRNA cleavage; IDA:SGD.::GO:0045899; P:positive regulation of RNA polymerase II transcriptional preinitiation complex assembly; IMP:SGD.::GO:0032968; P:positive regulation of transcription elongation from RNA polymerase II promoter; IDA:SGD.::GO:0031440; P:regulation of mRNA 3'-end processing; IMP:SGD.::GO:0031564; P:transcription antitermination; IDA:SGD.::GO:0006362; P:transcription elongation from RNA polymerase I promoter; IDA:SGD.::GO:0042797; P:tRNA transcription from RNA polymerase III promoter; IMP:SGD. | 32 | P27999 | 122 | RPB9_YEAST DNA-directed RNA polymerase II sub... | 123 | 0.15 | 33.9 | 24 | 38 | GO:0005665; C:DNA-directed RNA polymerase II, core complex; IDA:SGD. | | | | | | | | | | GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.::GO:0008270; F:zinc ion binding; IEA:InterPro. | | | | | | | | | | GO:0006281; P:DNA repair; IEA:UniProtKB-KW.::GO:0001193; P:maintenance of transcriptional fidelity during DNA-dependent transcription elongation from RNA polymerase II promoter; IMP:SGD.::GO:0006367; P:transcription initiation from RNA polymerase II promoter; IMP:SGD. | 33 | P60899 | 125 | RPB9_PIG DNA-directed RNA polymerase II subun... | 117 | 0.27 | 33.1 | 23 | 37 | GO:0005665; C:DNA-directed RNA polymerase II, core complex; ISS:UniProtKB. | | | | | | | | | | GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.::GO:0008270; F:zinc ion binding; IEA:InterPro. | | | | | | | | | | GO:0006366; P:transcription from RNA polymerase II promoter; ISS:UniProtKB. | 34 | P60898 | 125 | RPB9_MOUSE DNA-directed RNA polymerase II sub... | 117 | 0.27 | 33.1 | 23 | 37 | GO:0005665; C:DNA-directed RNA polymerase II, core complex; ISS:UniProtKB. | | | | | | | | | | GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.::GO:0008270; F:zinc ion binding; IEA:InterPro. | | | | | | | | | | GO:0006366; P:transcription from RNA polymerase II promoter; ISS:UniProtKB. | 35 | P36954 | 125 | RPB9_HUMAN DNA-directed RNA polymerase II sub... | 117 | 0.27 | 33.1 | 23 | 37 | GO:0005665; C:DNA-directed RNA polymerase II, core complex; IDA:UniProtKB. | | | | | | | | | | GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; TAS:ProtInc.::GO:0008270; F:zinc ion binding; TAS:ProtInc. | | | | | | | | | | GO:0006370; P:mRNA capping; TAS:Reactome.::GO:0000398; P:nuclear mRNA splicing, via spliceosome; TAS:Reactome.::GO:0050434; P:positive regulation of viral transcription; TAS:Reactome.::GO:0006468; P:protein phosphorylation; IDA:GOC.::GO:0006368; P:transcription elongation from RNA polymerase II promoter; TAS:Reactome.::GO:0006367; P:transcription initiation from RNA polymerase II promoter; TAS:Reactome.::GO:0006283; P:transcription-coupled nucleotide-excision repair; TAS:Reactome.::GO:0016032; P:viral reproduction; TAS:Reactome. | 36 | Q9DBV3 | 1145 | DHX34_MOUSE Probable ATP-dependent RNA helica... | 65 | 0.36 | 33.5 | 32 | 43 | GO:0005622; C:intracellular; IEA:InterPro. | | | | | | | | | | GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0008026; F:ATP-dependent helicase activity; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW.::GO:0008270; F:zinc ion binding; IEA:InterPro. | | | | | | | | | | | 37 | Q197A5 | 137 | VF349_IIV3 Putative transcription elongation ... | 44 | 0.4 | 32.7 | 43 | 59 | | | | | | | | | | | GO:0003676; F:nucleic acid binding; IEA:InterPro.::GO:0008270; F:zinc ion binding; IEA:InterPro. | | | | | | | | | | GO:0006351; P:transcription, DNA-dependent; IEA:InterPro. | 38 | P52652 | 308 | TFS2_CAEEL Putative transcription elongation ... | 38 | 0.48 | 33.1 | 37 | 50 | GO:0005634; C:nucleus; IEA:UniProtKB-SubCell. | | | | | | | | | | GO:0003677; F:DNA binding; IEA:UniProtKB-KW.::GO:0003746; F:translation elongation factor activity; IEA:InterPro.::GO:0008270; F:zinc ion binding; IEA:InterPro. | | | | | | | | | | GO:0032784; P:regulation of transcription elongation, DNA-dependent; IEA:InterPro.::GO:0006357; P:regulation of transcription from RNA polymerase II promoter; IEA:InterPro.::GO:0006354; P:transcription elongation, DNA-dependent; IEA:InterPro. | 39 | Q6FS48 | 122 | RPB9_CANGA DNA-directed RNA polymerase II sub... | 123 | 0.48 | 32.3 | 24 | 38 | GO:0005634; C:nucleus; IEA:UniProtKB-SubCell. | | | | | | | | | | GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.::GO:0008270; F:zinc ion binding; IEA:InterPro. | | | | | | | | | | | 40 | P20232 | 313 | TFS2_DROME Transcription elongation factor S-... | 38 | 0.56 | 32.7 | 37 | 47 | GO:0005634; C:nucleus; IEA:UniProtKB-SubCell. | | | | | | | | | | GO:0003677; F:DNA binding; IEA:UniProtKB-KW.::GO:0003746; F:translation elongation factor activity; IEA:InterPro.::GO:0008270; F:zinc ion binding; IEA:InterPro. | | | | | | | | | | GO:0032784; P:regulation of transcription elongation, DNA-dependent; IEA:InterPro.::GO:0006357; P:regulation of transcription from RNA polymerase II promoter; IEA:InterPro.::GO:0006354; P:transcription elongation, DNA-dependent; IEA:InterPro. | 41 | Q99PJ7 | 500 | ZN689_RAT Zinc finger protein 689 OS=Rattus n... | 121 | 0.95 | 32.3 | 23 | 37 | GO:0005634; C:nucleus; IEA:UniProtKB-SubCell. | | | | | | | | | | GO:0003677; F:DNA binding; IEA:UniProtKB-KW.::GO:0008270; F:zinc ion binding; IEA:InterPro. | | | | | | | | | | GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW. | 42 | Q96CS4 | 500 | ZN689_HUMAN Zinc finger protein 689 OS=Homo s... | 121 | 1.1 | 32 | 23 | 37 | GO:0005634; C:nucleus; IEA:UniProtKB-SubCell. | | | | | | | | | | GO:0003677; F:DNA binding; IEA:UniProtKB-KW.::GO:0008270; F:zinc ion binding; IEA:InterPro. | | | | | | | | | | GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW. | 43 | Q8BKK5 | 500 | ZN689_MOUSE Zinc finger protein 689 OS=Mus mu... | 121 | 1.1 | 32 | 23 | 37 | GO:0005634; C:nucleus; IEA:UniProtKB-SubCell. | | | | | | | | | | GO:0003677; F:DNA binding; IEA:UniProtKB-KW.::GO:0008270; F:zinc ion binding; IEA:InterPro. | | | | | | | | | | GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW. | 44 | Q7V1I2 | 858 | SYL_PROMP Leucine--tRNA ligase OS=Prochloroco... | 20 | 2 | 31.6 | 50 | 70 | GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell. | | | | | | | | | | GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0004823; F:leucine-tRNA ligase activity; IEA:EC. | | | | | | | | | | GO:0006429; P:leucyl-tRNA aminoacylation; IEA:InterPro. | 45 | A2BWL7 | 864 | SYL_PROM5 Leucine--tRNA ligase OS=Prochloroco... | 20 | 2 | 31.6 | 50 | 70 | GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell. | | | | | | | | | | GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0004823; F:leucine-tRNA ligase activity; IEA:EC. | | | | | | | | | | GO:0006429; P:leucyl-tRNA aminoacylation; IEA:InterPro. | 46 | Q9WVF7 | 2283 | DPOE1_MOUSE DNA polymerase epsilon catalytic ... | 46 | 2.1 | 31.6 | 33 | 48 | GO:0005634; C:nucleus; IEA:UniProtKB-SubCell. | | | | | | | | | | GO:0003677; F:DNA binding; IEA:UniProtKB-KW.::GO:0003887; F:DNA-directed DNA polymerase activity; IEA:UniProtKB-KW.::GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0008270; F:zinc ion binding; IEA:InterPro. | | | | | | | | | | GO:0006260; P:DNA replication; IEA:UniProtKB-KW. | 47 | A9AZ11 | 814 | SYL_HERA2 Leucine--tRNA ligase OS=Herpetosiph... | 35 | 2.1 | 31.2 | 40 | 60 | GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell. | | | | | | | | | | GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0004823; F:leucine-tRNA ligase activity; IEA:EC. | | | | | | | | | | GO:0006429; P:leucyl-tRNA aminoacylation; IEA:InterPro. | 48 | P49373 | 293 | TFS2_SCHPO Transcription elongation factor S-... | 37 | 2.3 | 31.2 | 38 | 49 | GO:0005634; C:nucleus; IDA:PomBase. | | | | | | | | | | GO:0000991; F:core RNA polymerase II binding transcription factor activity; IC:PomBase.::GO:0003677; F:DNA binding; IEA:UniProtKB-KW.::GO:0005515; F:protein binding; IPI:PomBase.::GO:0003746; F:translation elongation factor activity; IEA:InterPro.::GO:0008270; F:zinc ion binding; IEA:InterPro. | | | | | | | | | | GO:0002182; P:cytoplasmic translational elongation; NAS:PomBase.::GO:0006379; P:mRNA cleavage; ISS:PomBase.::GO:0032784; P:regulation of transcription elongation, DNA-dependent; IEA:InterPro.::GO:0006357; P:regulation of transcription from RNA polymerase II promoter; IEA:InterPro.::GO:0006368; P:transcription elongation from RNA polymerase II promoter; ISS:PomBase. | 49 | P23881 | 347 | TCEA3_MOUSE Transcription elongation factor A... | 38 | 2.4 | 31.2 | 34 | 47 | GO:0005634; C:nucleus; IDA:MGI. | | | | | | | | | | GO:0003677; F:DNA binding; IEA:UniProtKB-KW.::GO:0003746; F:translation elongation factor activity; IEA:InterPro.::GO:0008270; F:zinc ion binding; IEA:InterPro. | | | | | | | | | | GO:0032784; P:regulation of transcription elongation, DNA-dependent; IEA:InterPro.::GO:0006357; P:regulation of transcription from RNA polymerase II promoter; IEA:InterPro.::GO:0006354; P:transcription elongation, DNA-dependent; IEA:InterPro. | 50 | Q8RGA0 | 304 | ACCD_FUSNN Acetyl-coenzyme A carboxylase carb... | 84 | 2.5 | 30.8 | 26 | 40 | GO:0009317; C:acetyl-CoA carboxylase complex; IEA:InterPro. | | | | | | | | | | GO:0003989; F:acetyl-CoA carboxylase activity; IEA:EC.::GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0046872; F:metal ion binding; IEA:UniProtKB-KW. | | | | | | | | | | GO:0006633; P:fatty acid biosynthetic process; IEA:UniProtKB-KW. | 51 | O75764 | 348 | TCEA3_HUMAN Transcription elongation factor A... | 38 | 3.4 | 30.4 | 34 | 47 | GO:0005634; C:nucleus; IEA:UniProtKB-SubCell. | | | | | | | | | | GO:0003677; F:DNA binding; IEA:UniProtKB-KW.::GO:0003746; F:translation elongation factor activity; IEA:InterPro.::GO:0008270; F:zinc ion binding; IEA:InterPro. | | | | | | | | | | GO:0032784; P:regulation of transcription elongation, DNA-dependent; IEA:InterPro.::GO:0006357; P:regulation of transcription from RNA polymerase II promoter; IEA:InterPro.::GO:0006354; P:transcription elongation, DNA-dependent; IEA:InterPro. | 52 | Q3AIH7 | 293 | ACCD_SYNSC Acetyl-coenzyme A carboxylase carb... | 63 | 3.6 | 30.4 | 27 | 51 | GO:0009317; C:acetyl-CoA carboxylase complex; IEA:InterPro. | | | | | | | | | | GO:0003989; F:acetyl-CoA carboxylase activity; IEA:EC.::GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0046872; F:metal ion binding; IEA:UniProtKB-KW. | | | | | | | | | | GO:0006633; P:fatty acid biosynthetic process; IEA:UniProtKB-KW. | 53 | Q2KI09 | 349 | TCEA3_BOVIN Transcription elongation factor A... | 38 | 4.2 | 30.4 | 34 | 47 | GO:0005634; C:nucleus; IEA:UniProtKB-SubCell. | | | | | | | | | | GO:0003677; F:DNA binding; IEA:UniProtKB-KW.::GO:0003746; F:translation elongation factor activity; IEA:InterPro.::GO:0008270; F:zinc ion binding; IEA:InterPro. | | | | | | | | | | GO:0032784; P:regulation of transcription elongation, DNA-dependent; IEA:InterPro.::GO:0006357; P:regulation of transcription from RNA polymerase II promoter; IEA:InterPro.::GO:0006354; P:transcription elongation, DNA-dependent; IEA:InterPro. | 54 | P10711 | 301 | TCEA1_MOUSE Transcription elongation factor A... | 37 | 4.3 | 30.4 | 35 | 46 | GO:0005654; C:nucleoplasm; IDA:MGI. | | | | | | | | | | GO:0003677; F:DNA binding; IEA:UniProtKB-KW.::GO:0005515; F:protein binding; IPI:UniProtKB.::GO:0003746; F:translation elongation factor activity; IEA:InterPro.::GO:0008270; F:zinc ion binding; IEA:InterPro. | | | | | | | | | | GO:0030218; P:erythrocyte differentiation; IMP:MGI.::GO:0045944; P:positive regulation of transcription from RNA polymerase II promoter; IDA:MGI.::GO:0032784; P:regulation of transcription elongation, DNA-dependent; IEA:InterPro.::GO:0006354; P:transcription elongation, DNA-dependent; IEA:InterPro. | 55 | Q4KLL0 | 301 | TCEA1_RAT Transcription elongation factor A p... | 37 | 4.4 | 30.4 | 35 | 46 | GO:0005634; C:nucleus; IEA:UniProtKB-SubCell. | | | | | | | | | | GO:0003677; F:DNA binding; IEA:UniProtKB-KW.::GO:0003746; F:translation elongation factor activity; IEA:InterPro.::GO:0008270; F:zinc ion binding; IEA:InterPro. | | | | | | | | | | GO:0032784; P:regulation of transcription elongation, DNA-dependent; IEA:InterPro.::GO:0006357; P:regulation of transcription from RNA polymerase II promoter; IEA:InterPro.::GO:0006354; P:transcription elongation, DNA-dependent; IEA:InterPro. | 56 | Q29RL9 | 301 | TCEA1_BOVIN Transcription elongation factor A... | 37 | 4.5 | 30 | 35 | 46 | | | | | | | | | | | GO:0003677; F:DNA binding; IEA:UniProtKB-KW.::GO:0003746; F:translation elongation factor activity; IEA:InterPro.::GO:0008270; F:zinc ion binding; IEA:InterPro. | | | | | | | | | | GO:0032784; P:regulation of transcription elongation, DNA-dependent; IEA:InterPro.::GO:0006354; P:transcription elongation, DNA-dependent; IEA:InterPro. | 57 | A5GKV9 | 292 | ACCD_SYNPW Acetyl-coenzyme A carboxylase carb... | 63 | 9.9 | 29.3 | 25 | 51 | GO:0009317; C:acetyl-CoA carboxylase complex; IEA:InterPro. | | | | | | | | | | GO:0003989; F:acetyl-CoA carboxylase activity; IEA:EC.::GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0046872; F:metal ion binding; IEA:UniProtKB-KW. | | | | | | | | | | GO:0006633; P:fatty acid biosynthetic process; IEA:UniProtKB-KW. | 58 | Q58598 | 761 | Y1198_METJA Uncharacterized protein MJ1198 OS... | 32 | 4.5 | 30.4 | 31 | 56 | | | | | | | | | | | GO:0031072; F:heat shock protein binding; IEA:InterPro.::GO:0016787; F:hydrolase activity; IEA:InterPro.::GO:0030145; F:manganese ion binding; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:InterPro.::GO:0051082; F:unfolded protein binding; IEA:InterPro. | | | | | | | | | | | 59 | P23193 | 301 | TCEA1_HUMAN Transcription elongation factor A... | 37 | 4.6 | 30 | 35 | 46 | GO:0005730; C:nucleolus; IDA:HPA.::GO:0005654; C:nucleoplasm; TAS:Reactome. | | | | | | | | | | GO:0003677; F:DNA binding; IEA:UniProtKB-KW.::GO:0003746; F:translation elongation factor activity; IEA:InterPro.::GO:0008270; F:zinc ion binding; IEA:InterPro. | | | | | | | | | | GO:0050434; P:positive regulation of viral transcription; TAS:Reactome.::GO:0032784; P:regulation of transcription elongation, DNA-dependent; IEA:InterPro.::GO:0006368; P:transcription elongation from RNA polymerase II promoter; TAS:Reactome.::GO:0006283; P:transcription-coupled nucleotide-excision repair; TAS:Reactome.::GO:0016032; P:viral reproduction; TAS:Reactome. | 60 | Q07864 | 2286 | DPOE1_HUMAN DNA polymerase epsilon catalytic ... | 46 | 5.8 | 30 | 33 | 46 | GO:0005654; C:nucleoplasm; TAS:Reactome. | | | | | | | | | | GO:0003682; F:chromatin binding; IDA:UniProtKB.::GO:0003677; F:DNA binding; IDA:UniProtKB.::GO:0003887; F:DNA-directed DNA polymerase activity; IMP:UniProtKB.::GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0008270; F:zinc ion binding; IEA:InterPro. | | | | | | | | | | GO:0006287; P:base-excision repair, gap-filling; IDA:UniProtKB.::GO:0000731; P:DNA synthesis involved in DNA repair; IMP:UniProtKB.::GO:0006270; P:DNA-dependent DNA replication initiation; TAS:Reactome.::GO:0000082; P:G1/S transition of mitotic cell cycle; IMP:UniProtKB.::GO:0000216; P:M/G1 transition of mitotic cell cycle; TAS:Reactome.::GO:0006297; P:nucleotide-excision repair, DNA gap filling; IMP:UniProtKB.::GO:0000084; P:S phase of mitotic cell cycle; TAS:Reactome.::GO:0000722; P:telomere maintenance via recombination; TAS:Reactome.::GO:0032201; P:telomere maintenance via semi-conservative replication; TAS:Reactome.::GO:0006283; P:transcription-coupled nucleotide-excision repair; TAS:Reactome. | 61 | A2C1M1 | 294 | ACCD_PROM1 Acetyl-coenzyme A carboxylase carb... | 49 | 6.7 | 29.6 | 39 | 51 | GO:0009317; C:acetyl-CoA carboxylase complex; IEA:InterPro. | | | | | | | | | | GO:0003989; F:acetyl-CoA carboxylase activity; IEA:EC.::GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0046872; F:metal ion binding; IEA:UniProtKB-KW. | | | | | | | | | | GO:0006633; P:fatty acid biosynthetic process; IEA:UniProtKB-KW. |
