FGC: NR blast summary for locus

Fungal Genome Collection

University of Nebraska Lincoln

School of Biological Sciences and Center for Plant Science Innovation

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NR BLAST: Filtered hits per locus

Species:

Cryptococcus neoformans grubii H99

Locus:

CNAG_00016

Length:

49

Description:

conserved hypothetical protein

rec	Subject	Length	Description	Tax.	Align.Len	E value	Bit score	% ident.	% pos.
481	XP_002845229.1	109	U6 snRNP-associated protein Lsm3 [Arthroder...	F	43	0.039	36.6	37	63
482	XP_002381184.1	96	U6 small nuclear ribonucleoprotein (Lsm3), ...	F	43	0.04	36.6	35	63
483	EGF84290.1	132	hypothetical protein BATDEDRAFT_85018 [Batr...	F	43	0.042	37	37	65
484	EGD78331.1	115	hypothetical protein PTSG_09397 [Salpingoeca...	E	43	0.042	36.6	35	60
485	CCA66606.1	94	probable LSM3-U6 snRNA-associated Sm-like p...	F	43	0.042	36.2	30	63
486	YP_004383740.1	78	LSM domain-containing protein [Methanosaeta...	A	43	0.043	36.2	33	65
487	XP_002154306.1	87	PREDICTED: similar to Small nuclear ribonuc...	M	49	0.045	36.2	33	59
488	XP_500256.1	131	YALI0A19756p [Yarrowia lipolytica] gi\|49646...	F	46	0.045	37	35	61
489	EGR50310.1	75	predicted protein [Trichoderma reesei QM6a]...	F	43	0.049	36.2	35	63
490	YP_004807923.1	79	unnamed protein product [halophilic archaeo...	A	39	0.049	36.2	36	69
491	XP_003573886.1	88	PREDICTED: small nuclear ribonucleoprotein ...	P	47	0.05	36.2	34	62
492	XP_001302532.1	89	Sm protein [Trichomonas vaginalis G3] gi\|12...	E	35	0.051	36.2	43	63
493	XP_002846362.1	126	small nuclear ribonucleoprotein [Arthroderm...	F	46	0.052	36.6	37	61
494	XP_003662585.1	96	hypothetical protein MYCTH_2303370 [Mycelio...	F	43	0.054	36.2	37	60
495	XP_002331664.1	88	predicted protein [Populus trichocarpa] gi\|...	P	59	0.055	35.8	34	58
496	ZP_09042865.1	75	Like-Sm ribonucleoprotein core [Methanoline...	A	47	0.055	35.8	36	62
497	AFK22985.1	76	nuclear ribonucleoprotein [Pyrococcus sp. S...	A	42	0.056	35.8	33	67
498	EHK46715.1	97	hypothetical protein TRIATDRAFT_299236 [Tri...	F	43	0.057	36.2	35	63
499	EGU13473.1	97	Hypothetical Protein RTG_00195 [Rhodotorula ...	F	43	0.057	36.2	30	63
500	ACG25278.1	88	small nuclear ribonucleoprotein E [Zea mays...	P	59	0.058	35.8	34	58
501	XP_003573502.1	88	PREDICTED: small nuclear ribonucleoprotein ...	P	59	0.058	35.8	34	58
502	ACG38822.1	88	small nuclear ribonucleoprotein E [Zea mays...	P	59	0.058	35.8	34	58
503	XP_760593.1	146	hypothetical protein UM04446.1 [Ustilago ma...	F	45	0.059	36.6	36	62
504	EGX89744.1	96	U6 small nuclear ribonucleoprotein (Lsm3), ...	F	43	0.061	35.8	35	63
505	YP_003536738.1	76	snRNP-like protein [Haloferax volcanii DS2]...	A	41	0.061	35.8	32	68
506	ABK21228.1	88	unknown [Picea sitchensis][TAXONID:3332:TAXD...	P	47	0.062	35.8	34	62
507	AFK20410.1	76	small nuclear ribonucleoprotein (snRNP)-like...	A	41	0.062	35.8	32	68
508	XP_003044787.1	96	hypothetical protein NECHADRAFT_61990 [Nect...	F	43	0.065	35.8	35	63
509	XP_003655984.1	98	hypothetical protein THITE_2146609 [Thielav...	F	43	0.065	35.8	37	60
510	ACG29506.1	88	small nuclear ribonucleoprotein E [Zea mays...	P	59	0.067	35.8	34	58

records

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Total records:

1000

481 - 510

Elimate unknown annotation:

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Lower limit on alignment length::