FGC: NR blast summary for locus

Fungal Genome Collection

University of Nebraska Lincoln

School of Biological Sciences and Center for Plant Science Innovation

Home

About FGC

Use Cases

Species List

NR BLAST: Filtered hits per locus

Species:

Coccidiodis immitis RMSCC 2394

Locus:

CIRG_01223

Length:

252

Description:

RNA-binding protein

rec	Subject	Length	Description	Tax.	Align.Len	E value	Bit score	% ident.	% pos.
901	NP_001131810.1	236	uncharacterized protein LOC100193183 [Zea m...	P	71	0.00000004	60.1	44	61
902	XP_002977297.1	180	hypothetical protein SELMODRAFT_107195 [Sel...	P	78	0.00000004	58.9	37	58
903	AAM16010.1	147	glycine-rich RNA binding protein [Zea mays]...	P	81	0.00000004	58.5	40	58
904	AAM16021.1	150	glycine-rich RNA binding protein [Zea mays]...	P	81	0.00000005	58.5	40	58
905	XP_002525321.1	126	glycine-rich RNA-binding protein, putative ...	P	104	0.00000005	58.2	32	54
906	NP_001105572.1	145	glycine-rich RNA binding protein [Zea mays]...	P	81	0.00000005	58.5	40	58
907	ACG31231.1	146	glycine-rich RNA-binding protein 2 [Zea may...	P	81	0.00000005	58.5	40	58
908	XP_003682814.1	402	hypothetical protein TDEL_0G02360 [Torulasp...	F	81	0.00000005	61.2	38	58
909	XP_001657973.1	453	nucleolysin tia-1 [Aedes aegypti] gi\|108877...	F	73	0.00000005	61.2	34	62
910	ACI69486.1	146	Cold-inducible RNA-binding protein [Salmo s...	M	76	0.00000005	58.5	38	61
911	XP_761797.1	508	hypothetical protein UM05650.1 [Ustilago ma...	M	82	0.00000005	61.2	40	57
912	3MD1	83	A Chain A, Crystal Structure Of The Second R...	Y	77	0.00000005	57	39	56
913	XP_003564921.1	156	PREDICTED: glycine-rich RNA-binding protein...	P	80	0.00000005	58.5	41	60
914	AAM16013.1	149	glycine-rich RNA binding protein [Zea mays]...	P	81	0.00000005	58.5	40	58
915	XP_003453194.1	360	PREDICTED: tRNA selenocysteine 1-associated...	M	116	0.00000005	60.8	34	54
916	XP_002615883.1	385	hypothetical protein CLUG_04765 [Clavispora...	F	72	0.00000005	60.8	42	65
917	XP_002891364.1	443	ATRBP47C [Arabidopsis lyrata subsp. lyrata]...	P	63	0.00000006	60.8	49	67
918	AAF31403.1	164	AF200322_1 putative glycine-rich RNA binding...	P	80	0.00000006	58.5	34	56
919	ZP_09884931.1	82	RNP-1 like RNA-binding protein [Desulfospor...	B	75	0.00000006	57	39	59
920	EGV60103.1	475	RNA-binding domain-containing protein [Cand...	F	67	0.00000006	60.8	43	66
921	AAM16023.1	148	glycine-rich RNA binding protein [Zea mays]...	P	81	0.00000006	58.2	40	58
922	XP_312633.5	458	AGAP002335-PA [Anopheles gambiae str. PEST]...	P	91	0.00000006	60.8	33	56
923	CCH62466.1	674	hypothetical protein TBLA_0H01790 [Tetrapis...	F	69	0.00000006	61.2	41	61
924	AAM16009.1	149	glycine-rich RNA binding protein [Zea mays]...	P	81	0.00000006	58.2	40	58
925	EIE20852.1	264	hypothetical protein COCSUDRAFT_4708, parti...	P	70	0.00000006	60.1	44	59
926	BAB16700.1	285	TIA-1 like protein [Bombyx mori][TAXONID:709...	P	73	0.00000006	60.1	37	60
927	BAK05131.1	356	predicted protein [Hordeum vulgare subsp. v...	P	73	0.00000006	60.5	42	62
928	XP_001525917.1	552	hypothetical protein LELG_02475 [Lodderomyc...	F	74	0.00000007	60.8	42	68
929	NP_175180.1	432	RNA-binding protein 47C [Arabidopsis thalia...	P	63	0.00000007	60.8	48	68
930	XP_002490338.1	506	RNA binding protein that negatively regulat...	P	73	0.00000007	60.8	40	58

records

‹‹

››

Total records:

1000

901 - 930

Elimate unknown annotation:

Filter for keyword on hit description:

Select upper E value:

Select lower bit score:

Select lower %idenity value:

Select lower %positive value:

Taxonomic division:

Lower limit on hit length:

Lower limit on alignment length::