FGC: NR blast summary for locus

Fungal Genome Collection

University of Nebraska Lincoln

School of Biological Sciences and Center for Plant Science Innovation

Home

About FGC

Use Cases

Species List

NR BLAST: Filtered hits per locus

Species:

Coccidiodis immitis RMSCC 2394

Locus:

CIRG_00264

Length:

111

Description:

transcription initiation factor IIA gamma chain

rec	Subject	Length	Description	Tax.	Align.Len	E value	Bit score	% ident.	% pos.
121	ABY68182.1	99	transcription factor IIA gamma subunit [Ory...	P	99	2e-31	116	52	76
122	GAA99034.1	585	hypothetical protein E5Q_05723 [Mixia osmun...	F	103	2e-31	124	56	71
123	CBI19296.3	163	unnamed protein product [Vitis vinifera][TAX...	P	102	3e-31	118	49	77
124	EFA79276.1	131	transcription initiation factor IIA gamma c...	E	105	3e-31	117	53	71
125	ABY68180.1	99	transcription factor IIA gamma subunit [Ory...	P	99	3e-31	115	52	76
126	XP_638249.1	115	transcription initiation factor IIA gamma c...	E	102	2e-30	114	52	71
127	CAJ38374.1	114	transcription initiation factor [Plantago m...	P	103	3e-30	114	50	76
128	XP_002410024.1	118	transcription initiation factor IIA gamma c...	M	101	3e-30	114	52	74
129	ABK23201.1	106	unknown [Picea sitchensis][TAXONID:3332:TAXD...	P	102	8e-30	112	50	76
130	NP_001005107.1	109	general transcription factor IIA, 2, 12kDa ...	M	103	9e-30	112	48	72
131	NP_001075177.1	109	transcription initiation factor IIA subunit...	M	103	9e-30	112	48	72
132	XP_385477.1	76	hypothetical protein FG05301.1 [Gibberella ...	F	74	1e-29	111	68	85
133	NP_001232523.1	109	putative general transcription factor IIA s...	M	103	1e-29	112	48	72
134	ACO13378.1	108	Transcription initiation factor IIA subunit...	M	105	1e-29	112	48	70
135	XP_003418382.1	109	PREDICTED: transcription initiation factor ...	M	105	1e-29	112	46	71
136	XP_001374038.1	109	PREDICTED: transcription initiation factor ...	M	103	2e-29	112	47	72
137	NP_445797.1	109	transcription initiation factor IIA subunit...	M	103	2e-29	112	47	72
138	1NVP	108	D Chain D, Human TfiiaTBPDNA COMPLEX[TAXONID:...	M	103	2e-29	111	47	72
139	NP_004483.1	109	transcription initiation factor IIA subunit...	M	103	2e-29	111	47	72
140	CCA66823.1	125	probable TFIIA subunit [transcription initi...	F	97	2e-29	112	47	74
141	XP_002507208.1	111	predicted protein [Micromonas sp. RCC299] g...	P	107	2e-29	111	46	71
142	NP_001117838.1	108	transcription initiation factor IIA subunit...	M	103	2e-29	111	49	71
143	XP_003699563.1	112	PREDICTED: transcription initiation factor ...	M	101	3e-29	111	50	74
144	XP_003267100.1	109	PREDICTED: transcription initiation factor ...	M	103	4e-29	110	47	72
145	EFN85582.1	170	Transcription initiation factor IIA subunit...	M	101	4e-29	112	50	75
146	XP_002154960.1	108	PREDICTED: similar to Transcription initiat...	M	100	6e-29	110	49	73
147	XP_003285410.1	116	transcription initiation factor IIA gamma c...	E	102	6e-29	110	52	71
148	NP_001018441.1	109	transcription initiation factor IIA subunit...	M	103	6e-29	110	48	71
149	ACO09664.1	109	Transcription initiation factor IIA gamma c...	M	103	7e-29	110	48	71
150	XP_001476879.1	109	PREDICTED: transcription initiation factor ...	M	103	8e-29	110	46	71

records

‹‹

››

Total records:

323

121 - 150

Elimate unknown annotation:

Filter for keyword on hit description:

Select upper E value:

Select lower bit score:

Select lower %idenity value:

Select lower %positive value:

Taxonomic division:

Lower limit on hit length:

Lower limit on alignment length::