SuiteMSA publications:
Supplementary materials
Update: 10-04-2011
"SuiteMSA: Visual Tools for Multiple Sequence Alignment Comparison and Molecular Sequence Simulation" Catherine L. Anderson, Cory L. Strope, Etsuko N. Moriyama (2011) BMC Bioinformatics 12:184.
| All files for above publication, zipped | |
| Additional file 1: 23 lipocalin protein sequences | |
| Additional file 2: 23 lipocalin protein sequences manual alignment | |
| Additional file 3: 23 lipocalin protein sequences phylogeny | |
| Additional file 4: Simulation instruction for use case | |
| Additional file 5: Guide tree file | |
| Additional file 6: Simulation root sequence MSA | |
| Additional file 7: Simulation motif specification file | |
| Additional file 8: Simulation amino acid frequency file | |
| Additional file 9: Simulation indel-length distribution file |
"Assessing Multiple Sequence Alignments Using Visual Tools"
Catherine L. Anderson, Cory L. Strope, Etsuko N. Moriyama (in press) InTech: Bioinformatics Book1
Catherine L. Anderson, Cory L. Strope, Etsuko N. Moriyama (in press) InTech: Bioinformatics Book1
| All files for above publication, zipped | |
| Section 2: SPS and column scores | |
| Section 3: Lipocalin superfamily | |
| Section 4: GCPR proteins | |
| Section 5: HIV proteins | |
| Section 6: Simulation data | |
| Section 7: rDNA sequences |