Biochemical Genomics, Quizzing the Chemical Factories of Oilseeds.
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PEOPLE

WASHINGTON STATE UNIVERSITY
Institute for Biological Chemistry

director

John Browse
Professor

John Browse has long-standing interests in genetic analysis of lipid synthesis and function, and in using genomics techniques to investigate FA modification in plants.

LAB MEMBERS
Harry van Erp
Postdoc
Laura Wayne
Grad Student
Kim Cotton
Grad Student
 
Shen Bayon
Postdoc
Phil Bates
Postdoc
 
washington state
washington state

RESEARCH OVERVIEW

The research programs in my laboratory encompass a diverse set of projects that have at their base our investigation of the biosynthesis and function of membrane and seed-storage lipids in plants using Arabidopsis as a model. The projects include the isolation and characterization of genes that control the elongation, desaturation or other modifications of fatty acids. These genes have been used to produce transgenic plants with altered membrane compositions or improved vegetable oils. One goal is to engineer plants to provide environmentally friendly production of plastics, resins and other chemical products that enhance people’s lives. We also have research projects that focus on the roles of membrane lipids in the cell biology and physiology of plants using a large number of mutants with alterations in the lipid composition of their membranes. In addition, our isolation of jasmonate-deficient and jasmonate-responsive mutants of Arabidopsis has allowed us to make new discoveries about the involvement of jasmonate in pollen development, insect defense and non-host resistance against fungal pathogens. These discoveries have wide implications for plant biology in areas ranging from the production of biomaterials to crop protection.

BROOKHAVEN NATIONAL LABORATORY

John Shanklin
Senior Biochemist

John Shanklin is an expert in the structure and function of desaturases and other fatty acid modifying enzymes, and in engineering protein function.

LAB MEMBERS
Richa Rawat
Postdoc
Xiaohong Yu
Postdoc
Maria Sweet
Undergrad

brookhaven
brookhaven

RESEARCH OVERVIEW

As the population of the world increases there are increasing demands on natural resources. One solution to this problem is to use plants as 'Green Factories' to produce specific renewable resources and sources of bioenergy. Advances in genetic engineering have resulted in routine methods for the introduction of genes into crop plants. Previous efforts in crop improvement have focused on the transfer of existing genes into plants to tailor plant storage compounds. A key element of future efforts will be directed towards engineering enzymes with novel specificities and/or the ability to introduce a particular functionality. This will free metabolic engineers from the constraints imposed by the existing variation of natural enzymes and will present a major step towards the engineering of desired storage compounds.

UNIVERSITY OF NEBRASKA, LINCOLN
Center for Plant Science Innovation

director

Edgar Cahoon
Professor

Ed Cahoon brings considerable knowledge in the biochemistry and functional genomics of many different FA modifying enzymes, and in the metabolic engineering of mFA biosynthetic pathways in model plants and oilseed crops.

LAB MEMBERS
Kyle Luttgeharm
Undergrad
Anji Reddy Konda
Grad Student
Xiangjun Li
Postdoc
 
Peng Wang
Postdoc
Blake Hoffmeyer
Undergrad
 

nebraska
nebraska

RESEARCH OVERVIEW

My lab conducts basic and applied research on plant lipid metabolism. The goals of our research are to enhance the nutritional and industrial value of crop plants and to probe the synthesis and function of bioactive lipids for nutritional biofortification and improved agronomic performance of crops.

MONTANA STATE UNIVERSITY
Department of Plant Sciences & Plant Pathology

director

Chaofu Lu
Assistant Professor

Chaofu Lu has long-term interests in oilseed metabolism and biotechnology and has made key advancements in the development of Camelina as designer oilseed.

LAB MEMBERS
Anna Snapp
Grad Student
Zhaohui Hu
Postdoc
Liyun Su
Undergrad
 
Jinling Kang
Technician
Jakob Kammeraad
Undergrad
 

montana state
montana state

RESEARCH OVERVIEW

The goal of research in the Lu Lab is to understad genetic and biochemical factors that contribute to the great diversity of fatty acids in seed oils. A particular interest is to genetically engineer the seeds of camelina (Camelina sativa) to produce industrial fatty acids and to increase oil content for biofuels and biomaterials.

DONALD DANFORTH PLANT SCIENCE CENTER

director

Jan Jaworski
Principal Investigator

Jan Jaworski has strong expertise in metabolic profiling of lipid metabolism through the development and use of GC/MS- and HPLC/MS-based techniques.

LAB MEMBERS
Jia Li
Technician
Shin Gene Kang
Postdoc
Aravind Jukanti
Postdoc
   
Hongyu Gao
Postdoc
   

danforth
danforth

RESEARCH OVERVIEW

Plants accumulate oil in their seeds to provide the energy and carbon necessary for a germinating seed to grow into a plant. While seeds from our familiar crops are rich in edible vegetable oils, nature has provided some seeds with a broad assortment of oil compositions, and some unusual oils may have useful industrial applications. A major focus of the Jaworski lab is to use biotechnology to explore the capacity of seeds to accumulate useful molecules, usually for non-food or industrial applications. Another area of focus in recent years is to explore ways to engineer seeds to make more oil for biofuels. With this research, the Jaworski lab is obtaining a basic understanding of pathways involved in plant lipid synthesis.

MICHIGAN STATE UNIVERSITY
Ohlrogge Lab

director

John Ohlrogge
Professor

John Ohlrogge has developed novel isotope labeling strategies to probe seed metabolism in vivo and has pioneered applications of transcriptomics to understanding biochemical pathways.

LAB MEMBERS
Xia Cao
Postdoc
Henrik Tjellstrom
Postdoc
Adrian Troncoso-Ponce
Postdoc
Adam Rice
Undergrad
Merissa Strawsine
Undergrad
Kate McGrew
Undergrad

michigan state
michigan state

OHLROGGE LAB RESEARCH OVERVIEW

A long term goal of my laboratory is to understand how plants control the activity of fatty acid synthesis and lipid metabolism pathways and how their products are channeled into diverse roles and locations within or outside the plant cell. In order to guide rational efforts toward metabolic engineering of seeds we are developing flux models of central metabolism in oilseeds. Recently we discovered a new metabolic route for carbohydrate conversion to oil in seeds. We have characterized genes for several enzymes of lipid metabolism and are studying the regulation of these genes through microarrays and other genomic approaches. We also transform plants with genes involved in lipid metabolism in sense and antisense constructs both to study their physiological role and to obtain useful alterations in plant oils.

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The National Science Foundation