#                                                                            --- full sequence --- -------------- this domain -------------   hmm coord   ali coord   env coord
# target name        accession   tlen query name           accession   qlen   E-value  score  bias   #  of  c-Evalue  i-Evalue  score  bias  from    to  from    to  from    to  acc description of target
#------------------- ---------- ----- -------------------- ---------- ----- --------- ------ ----- --- --- --------- --------- ------ ----- ----- ----- ----- ----- ----- ----- ---- ---------------------
Pur_DNA_glyco        PF02245.11   184 sp|Q5HLQ3|3MGH_STAEQ -            205     3e-48  163.4   0.0   1   1   2.5e-52   3.7e-48  163.1   0.0     3   184     5   188     4   188 0.96 Methylpurine-DNA glycosylase (MPG)
NT5C                 PF06941.7    191 sp|Q5HR07|53DR_STAEQ -            179   5.7e-34  117.3   0.4   1   1   1.4e-37   7.2e-34  116.9   0.4     4   182     5   171     3   178 0.94 5' nucleotidase, deoxy (Pyrimidine), cytosolic type C protein (NT5C)
UPF0193              PF05250.6    212 sp|Q5HR07|53DR_STAEQ -            179     0.036   13.6   0.1   1   1   1.2e-05     0.061   12.8   0.1   137   183     2    47     1    52 0.89 Uncharacterised protein family (UPF0193)
SBDS_C               PF09377.5    125 sp|Q5HR07|53DR_STAEQ -            179     0.063   12.9   0.0   2   2     5e-05      0.25   11.0   0.0    48    77    72   101    66   106 0.88 SBDS protein C-terminal domain
6PGD                 PF00393.14   291 sp|Q5HP42|6PGD_STAEQ -            468  4.8e-140  465.8   0.7   1   1    3e-143  6.4e-140  465.4   0.7     1   290   178   465   178   466 1.00 6-phosphogluconate dehydrogenase, C-terminal domain
NAD_binding_2        PF03446.10   163 sp|Q5HP42|6PGD_STAEQ -            468   4.6e-52  176.1   0.0   1   1   3.2e-55   6.8e-52  175.5   0.0     2   163     3   174     2   174 0.97 NAD binding domain of 6-phosphogluconate dehydrogenase
ApbA                 PF02558.11   151 sp|Q5HP42|6PGD_STAEQ -            468   0.00028   20.3   0.0   1   1     4e-07   0.00084   18.8   0.0     1    96     5    95     5   102 0.85 Ketopantoate reductase PanE/ApbA
2-Hacid_dh_C         PF02826.14   178 sp|Q5HP42|6PGD_STAEQ -            468    0.0014   17.8   0.0   1   1   1.5e-06    0.0031   16.6   0.0    37   153     3   126     1   141 0.78 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain
Shikimate_DH         PF01488.15   135 sp|Q5HP42|6PGD_STAEQ -            468      0.02   14.9   0.0   1   1   1.8e-05     0.037   14.1   0.0    13    71     3    61     1    79 0.82 Shikimate / quinate 5-dehydrogenase
3HCDH_N              PF02737.13   180 sp|Q5HP42|6PGD_STAEQ -            468     0.029   14.0   0.0   1   1     3e-05     0.064   12.9   0.0     1    39     4    42     4    62 0.91 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain
F420_oxidored        PF03807.12    96 sp|Q5HP42|6PGD_STAEQ -            468      0.13   12.7   0.0   1   1   0.00016      0.33   11.4   0.0     1    92     4    98     4   102 0.77 NADP oxidoreductase coenzyme F420-dependent
APH                  PF01636.18   239 sp|Q5HMP3|AACA_STAEQ -            479   6.4e-21   75.1   0.0   1   1   4.4e-24   9.2e-21   74.6   0.0     2   239   205   440   204   440 0.87 Phosphotransferase enzyme family
Acetyltransf_8       PF13523.1    152 sp|Q5HMP3|AACA_STAEQ -            479   1.2e-19   70.6   0.0   1   1     1e-22   2.2e-19   69.8   0.0     3   139    12   156    10   163 0.90 Acetyltransferase (GNAT) domain
Acetyltransf_3       PF13302.1    142 sp|Q5HMP3|AACA_STAEQ -            479   4.6e-14   52.7   0.1   1   1   7.3e-17   1.5e-13   51.0   0.0     2   142     8   154     7   154 0.85 Acetyltransferase (GNAT) domain
Acetyltransf_1       PF00583.19    83 sp|Q5HMP3|AACA_STAEQ -            479   1.6e-11   44.0   0.0   1   1   1.5e-14   3.1e-11   43.1   0.0     2    83    64   154    63   154 0.92 Acetyltransferase (GNAT) family
Acetyltransf_7       PF13508.1     79 sp|Q5HMP3|AACA_STAEQ -            479     6e-05   23.1   1.1   1   2   2.1e-07   0.00044   20.3   0.2     7    78    62   154    55   155 0.74 Acetyltransferase (GNAT) domain
Acetyltransf_4       PF13420.1    155 sp|Q5HMP3|AACA_STAEQ -            479   0.00028   20.8   5.0   1   2   1.3e-07   0.00028   20.8   0.2     1   143    10   162    10   173 0.81 Acetyltransferase (GNAT) domain
ACCA                 PF03255.9    145 sp|Q5HNK5|ACCA_STAEQ -            314   3.1e-63  211.6   0.1   1   1   1.7e-66   4.9e-63  211.0   0.1     3   145     2   144     1   144 0.99 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit
Carboxyl_trans       PF01039.17   493 sp|Q5HNK5|ACCA_STAEQ -            314   5.5e-17   61.2   0.0   1   1   1.9e-20   5.8e-17   61.2   0.0   283   425    93   239    11   289 0.87 Carboxyl transferase domain
MdcE                 PF06833.6    234 sp|Q5HNK5|ACCA_STAEQ -            314   0.00057   19.1   0.0   1   1   2.7e-07   0.00081   18.6   0.0    26   171   100   250    82   285 0.71 Malonate decarboxylase gamma subunit (MdcE)
ECH                  PF00378.15   245 sp|Q5HNK5|ACCA_STAEQ -            314   0.00069   18.8   1.3   1   1   3.7e-06     0.011   14.8   1.3    60   178   155   270   153   308 0.76 Enoyl-CoA hydratase/isomerase family
Striatin             PF08232.7    135 sp|Q5HNK5|ACCA_STAEQ -            314     0.025   14.9   0.0   1   1   1.9e-05     0.058   13.7   0.0    29    71    10    49     4    73 0.85 Striatin family
Carboxyl_trans       PF01039.17   493 sp|Q5HNK4|ACCD_STAEQ -            285   1.1e-16   60.3   0.3   1   1   6.4e-20   2.4e-16   59.1   0.2     8   180    61   243    59   251 0.82 Carboxyl transferase domain
DUF2387              PF09526.5     71 sp|Q5HNK4|ACCD_STAEQ -            285     0.078   12.9   0.3   1   1   4.5e-05      0.17   11.8   0.3    10    45    32    64    27    73 0.84 Probable metal-binding protein (DUF2387)
OrfB_Zn_ribbon       PF07282.6     69 sp|Q5HNK4|ACCD_STAEQ -            285     0.079   12.6   1.1   1   1   4.3e-05      0.16   11.6   1.1    30    56    32    59    30    60 0.93 Putative transposase DNA-binding domain
PRP21_like_P         PF12230.3    229 sp|Q5HNK4|ACCD_STAEQ -            285      0.11   11.9   0.3   1   1   4.9e-05      0.18   11.2   0.3   148   185    10    47     3    53 0.88 Pre-mRNA splicing factor PRP21 like protein
Acetate_kinase       PF00871.12   388 sp|Q5HNJ4|ACKA_STAEQ -            417  1.3e-160  534.2   0.1   1   1    1e-164  1.5e-160  533.9   0.1     2   387     5   389     4   390 0.99 Acetokinase family
Aconitase            PF00330.15   465 sp|Q5HPJ0|ACON_STAEQ -            901  8.2e-143  476.2   0.0   1   1  1.5e-146  1.1e-142  475.7   0.0     8   465    61   570    57   570 0.92 Aconitase family (aconitate hydratase)
Aconitase_C          PF00694.14   131 sp|Q5HPJ0|ACON_STAEQ -            901   5.3e-41  139.7   0.0   1   1   1.6e-44   1.2e-40  138.6   0.0     3   130   700   827   698   828 0.97 Aconitase C-terminal domain
ACPS                 PF01648.15   115 sp|Q5HME4|ACPS_STAEQ -            117   1.8e-17   63.2   0.0   1   1   1.8e-21   2.6e-17   62.6   0.0     1   111     4   107     4   112 0.88 4'-phosphopantetheinyl transferase superfamily
UvrD-helicase        PF00580.16   315 sp|Q5HQJ4|ADDA_STAEQ -           1218   6.6e-78  262.1  15.7   1   3   5.7e-81   6.6e-78  262.1  15.7     1   314    11   454    11   455 0.94 UvrD/REP helicase N-terminal domain
UvrD_C               PF13361.1    351 sp|Q5HQJ4|ADDA_STAEQ -           1218   1.9e-59  201.9   2.7   1   1   1.6e-62   1.9e-59  201.9   2.7     1   348   465   869   465   872 0.86 UvrD-like helicase C-terminal domain
UvrD_C_2             PF13538.1    104 sp|Q5HQJ4|ADDA_STAEQ -           1218     5e-09   36.2   0.1   1   2   4.5e-06    0.0052   16.9   0.0    31    78   751   797   731   807 0.74 UvrD-like helicase C-terminal domain
UvrD_C_2             PF13538.1    104 sp|Q5HQJ4|ADDA_STAEQ -           1218     5e-09   36.2   0.1   2   2   1.2e-05     0.014   15.5   0.0    83   104   847   868   834   868 0.84 UvrD-like helicase C-terminal domain
PDDEXK_1             PF12705.2    257 sp|Q5HQJ4|ADDA_STAEQ -           1218     1e-08   34.9   1.3   1   1   8.9e-12     1e-08   34.9   1.3    33   195  1041  1211  1026  1217 0.66 PD-(D/E)XK nuclease superfamily
AAA_19               PF13245.1     76 sp|Q5HQJ4|ADDA_STAEQ -           1218   5.4e-08   32.4   0.0   1   1   1.1e-10   1.3e-07   31.2   0.0     9    63    23    80    16   111 0.79 Part of AAA domain
DEAD                 PF00270.24   169 sp|Q5HQJ4|ADDA_STAEQ -           1218   4.4e-06   26.3   0.0   1   1   9.9e-09   1.1e-05   24.9   0.0     1    70    12    81    12   122 0.79 DEAD/DEAH box helicase
AAA_12               PF13087.1    200 sp|Q5HQJ4|ADDA_STAEQ -           1218   0.00037   19.9  11.2   2   2     5e-07   0.00057   19.3   0.0   128   198   752   870   743   872 0.79 AAA domain
Zot                  PF05707.7    193 sp|Q5HQJ4|ADDA_STAEQ -           1218    0.0082   15.6   0.2   1   2   7.6e-05     0.087   12.2   0.0     4    63    27    88    26   109 0.74 Zonular occludens toxin (Zot)
KxDL                 PF10241.4     88 sp|Q5HQJ4|ADDA_STAEQ -           1218     0.019   14.8   0.3   1   1   0.00012      0.14   12.1   0.3     7    65   261   319   256   337 0.91 Uncharacterized conserved protein
CompInhib_SCIN       PF11546.3    114 sp|Q5HQJ4|ADDA_STAEQ -           1218      0.77    9.6   4.6   1   1   0.00027       0.3   10.9   0.2    28    77   524   573   514   600 0.77 Staphylococcal complement inhibitor SCIN
ResIII               PF04851.10   184 sp|Q5HQJ4|ADDA_STAEQ -           1218       1.1    9.0   9.2   1   1   2.3e-05     0.026   14.3   0.6    25   124    23   109     5   218 0.76 Type III restriction enzyme, res subunit
PDDEXK_1             PF12705.2    257 sp|Q5HQJ5|ADDB_STAEQ -           1159   3.7e-41  141.2   1.8   2   2   2.5e-44   5.3e-41  140.7   0.1     2   257   773  1122   772  1122 0.83 PD-(D/E)XK nuclease superfamily
UvrD_C               PF13361.1    351 sp|Q5HQJ5|ADDB_STAEQ -           1159   6.7e-16   58.6   7.6   2   2   3.2e-19   6.7e-16   58.6   7.6    36   348   288   655   255   658 0.73 UvrD-like helicase C-terminal domain
AAA_30               PF13604.1    196 sp|Q5HQJ5|ADDB_STAEQ -           1159     0.011   15.3   0.0   1   1   1.1e-05     0.024   14.2   0.0    23    58     6    44     2    56 0.84 AAA domain
DUF4123              PF13503.1    124 sp|Q5HQJ5|ADDB_STAEQ -           1159      0.11   12.5   0.7   2   2   0.00027      0.57   10.1   0.1    39    97   664   725   643   750 0.80 Domain of unknown function (DUF4123)
AAA_19               PF13245.1     76 sp|Q5HQJ5|ADDB_STAEQ -           1159      0.18   11.5   0.0   1   1   0.00019       0.4   10.4   0.0    17    52     8    42     6    48 0.93 Part of AAA domain
ACDC                 PF14733.1     92 sp|Q5HQJ5|ADDB_STAEQ -           1159       1.4    9.0   9.5   2   3   0.00032      0.67   10.1   0.1    34    83   450   506   386   512 0.81 AP2-coincident C-terminal
ADH_zinc_N           PF00107.21   130 sp|Q5HRD6|ADH_STAEQ  -            340   4.8e-30  103.7   0.4   1   1   4.5e-33   8.3e-30  102.9   0.4     1   129   172   300   172   301 0.98 Zinc-binding dehydrogenase
ADH_N                PF08240.7    109 sp|Q5HRD6|ADH_STAEQ  -            340   5.1e-29  100.2   4.4   1   1   2.7e-32   5.1e-29  100.2   4.4     1   109    24   131    24   131 0.97 Alcohol dehydrogenase GroES-like domain
ADH_zinc_N_2         PF13602.1    127 sp|Q5HRD6|ADH_STAEQ  -            340   1.4e-05   25.9   0.3   1   1   1.5e-08   2.8e-05   24.9   0.3     1   127   205   334   205   334 0.74 Zinc-binding dehydrogenase
2-Hacid_dh_C         PF02826.14   178 sp|Q5HRD6|ADH_STAEQ  -            340    0.0028   16.8   0.1   2   2   3.1e-05     0.057   12.5   0.1    36    77   162   204   150   216 0.84 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain
AlaDh_PNT_C          PF01262.16   168 sp|Q5HRD6|ADH_STAEQ  -            340     0.037   13.5   0.1   1   1   5.2e-05     0.096   12.2   0.1    13    67   154   210   144   229 0.84 Alanine dehydrogenase/PNT, C-terminal domain
Methyltransf_11      PF08241.7     95 sp|Q5HRD6|ADH_STAEQ  -            340     0.045   14.2   0.2   1   1   0.00011       0.2   12.1   0.0     5    80   170   251   167   261 0.67 Methyltransferase domain
Methyltransf_18      PF12847.2    112 sp|Q5HRD6|ADH_STAEQ  -            340     0.054   14.0   0.0   1   1   0.00011      0.21   12.1   0.0    11    96   172   278   171   290 0.55 Methyltransferase domain
Methyltransf_31      PF13847.1    152 sp|Q5HRD6|ADH_STAEQ  -            340     0.088   12.3   0.1   1   1    0.0001      0.19   11.3   0.1    13    47   172   205   171   255 0.88 Methyltransferase domain
AgrB                 PF04647.10   185 sp|Q5HMY5|AGRB_STAEQ -            194   5.5e-50  169.0  18.0   1   1   4.2e-54   6.2e-50  168.8  18.0     1   184     6   186     6   187 0.98 Accessory gene regulator B
AhpC-TSA             PF00578.16   124 sp|Q5HRY1|AHPC_STAEQ -            189   3.3e-34  117.2   0.1   1   1   1.1e-37     4e-34  116.9   0.1     8   123    11   135     4   136 0.93 AhpC/TSA family
Redoxin              PF08534.5    146 sp|Q5HRY1|AHPC_STAEQ -            189   4.1e-15   55.5   0.1   1   1   1.4e-18     5e-15   55.3   0.1    15   137    20   144     5   154 0.87 Redoxin
1-cysPrx_C           PF10417.4     40 sp|Q5HRY1|AHPC_STAEQ -            189   0.00015   21.3   0.1   1   1   8.3e-08   0.00031   20.3   0.1     1    23   156   179   156   182 0.89 C-terminal domain of 1-Cys peroxiredoxin
SCO1-SenC            PF02630.9    174 sp|Q5HRY1|AHPC_STAEQ -            189     0.014   15.0   0.0   1   1   7.4e-06     0.027   14.0   0.0    43    92    24    73     4    93 0.86 SCO1/SenC
Pyr_redox_2          PF07992.9    201 sp|Q5HRY2|AHPF_STAEQ -            507   3.7e-27   95.5   0.0   1   1   8.2e-30   6.4e-27   94.7   0.0     1   200   207   482   207   483 0.88 Pyridine nucleotide-disulphide oxidoreductase
Pyr_redox            PF00070.22    80 sp|Q5HRY2|AHPF_STAEQ -            507     2e-14   53.7   6.6   2   2   9.1e-15   7.1e-12   45.5   0.1     2    71   348   412   347   422 0.93 Pyridine nucleotide-disulphide oxidoreductase
Pyr_redox_3          PF13738.1    203 sp|Q5HRY2|AHPF_STAEQ -            507   1.4e-11   44.8   0.2   1   1   1.3e-13   9.8e-11   42.0   0.0    77   197   255   375   239   381 0.87 Pyridine nucleotide-disulphide oxidoreductase
GIDA                 PF01134.17   392 sp|Q5HRY2|AHPF_STAEQ -            507   4.6e-07   29.0  11.4   1   3   0.00011     0.086   11.6   2.3     1    62   207   281   207   290 0.65 Glucose inhibited division protein A
GIDA                 PF01134.17   392 sp|Q5HRY2|AHPF_STAEQ -            507   4.6e-07   29.0  11.4   3   3   2.3e-06    0.0018   17.2   0.0     1    29   347   379   347   426 0.87 Glucose inhibited division protein A
FAD_oxidored         PF12831.2    428 sp|Q5HRY2|AHPF_STAEQ -            507   4.4e-06   26.0   4.0   1   2   3.5e-07   0.00027   20.1   0.3     1    42   207   248   207   305 0.74 FAD dependent oxidoreductase
FAD_binding_2        PF00890.19   417 sp|Q5HRY2|AHPF_STAEQ -            507   6.2e-06   25.3  13.2   1   4   0.00011     0.083   11.7   1.5     1    29   207   235   207   246 0.93 FAD binding domain
FAD_binding_2        PF00890.19   417 sp|Q5HRY2|AHPF_STAEQ -            507   6.2e-06   25.3  13.2   3   4    0.0011      0.83    8.4   1.6     1    34   347   380   347   388 0.87 FAD binding domain
FAD_binding_2        PF00890.19   417 sp|Q5HRY2|AHPF_STAEQ -            507   6.2e-06   25.3  13.2   4   4   0.00083      0.64    8.7   0.0   358   402   433   479   396   486 0.83 FAD binding domain
Thioredoxin_3        PF13192.1     76 sp|Q5HRY2|AHPF_STAEQ -            507   6.6e-06   25.8   0.0   1   1   6.2e-08   4.8e-05   23.0   0.0     4    70   120   187   117   192 0.78 Thioredoxin domain
Thi4                 PF01946.12   230 sp|Q5HRY2|AHPF_STAEQ -            507   1.4e-05   24.3   0.4   1   2   2.6e-05      0.02   13.9   0.0    16    50   204   238   192   298 0.86 Thi4 family
HI0933_like          PF03486.9    409 sp|Q5HRY2|AHPF_STAEQ -            507   1.9e-05   23.3   7.7   3   3   2.9e-05     0.022   13.2   0.3     2    34   347   379   346   382 0.92 HI0933-like protein
DAO                  PF01266.19   358 sp|Q5HRY2|AHPF_STAEQ -            507   3.5e-05   22.8  14.3   2   4   8.8e-05     0.069   12.0   0.0   151   206   264   319   256   327 0.90 FAD dependent oxidoreductase
FAD_binding_3        PF01494.14   356 sp|Q5HRY2|AHPF_STAEQ -            507    0.0029   16.7   0.5   1   2   0.00024      0.19   10.7   0.1     2    33   206   237   205   310 0.82 FAD binding domain
K_oxygenase          PF13434.1    341 sp|Q5HRY2|AHPF_STAEQ -            507      0.01   14.7   0.0   2   2   7.7e-05      0.06   12.2   0.0   131   215   292   370   248   434 0.71 L-lysine 6-monooxygenase (NADPH-requiring)
Glutaredoxin         PF00462.19    60 sp|Q5HRY2|AHPF_STAEQ -            507     0.098   12.6   3.0   1   1   0.00016      0.13   12.3   0.0     4    58   122   175   119   177 0.73 Glutaredoxin
Aldedh               PF00171.17   462 sp|Q5HMA0|ALD1_STAEQ -            475  1.9e-161  537.5   0.0   1   1  2.8e-165  2.1e-161  537.3   0.0     1   462    13   470    13   470 0.98 Aldehyde dehydrogenase family
VASP_tetra           PF08776.6     40 sp|Q5HMA0|ALD1_STAEQ -            475    0.0071   15.6   0.3   1   1   2.3e-06     0.017   14.4   0.3    11    35    68    92    66    94 0.95 VASP tetramerisation domain
Aldedh               PF00171.17   462 sp|Q5HLA3|ALDA_STAEQ -            497  1.5e-167  557.5   0.2   1   1  3.5e-171  1.7e-167  557.4   0.2     3   462    24   485    22   485 0.98 Aldehyde dehydrogenase family
UPF0193              PF05250.6    212 sp|Q5HLA3|ALDA_STAEQ -            497    0.0032   17.0   0.0   1   1   1.2e-06    0.0059   16.2   0.0   147   194    73   120    42   130 0.70 Uncharacterised protein family (UPF0193)
LuxC                 PF05893.9    400 sp|Q5HLA3|ALDA_STAEQ -            497     0.024   13.3   0.0   1   1   1.2e-05     0.059   12.0   0.0    72   263   133   319    77   334 0.84 Acyl-CoA reductase (LuxC)
Glycolytic           PF00274.14   348 sp|Q5HL21|ALF1_STAEQ -            296   1.4e-48  165.1   0.4   1   1   1.8e-50   8.8e-47  159.1   0.4     8   308     7   280     1   294 0.93 Fructose-bisphosphate aldolase class-I
Hist_deacetyl        PF00850.14   311 sp|Q5HL21|ALF1_STAEQ -            296    0.0033   16.7   0.0   1   1   1.5e-06    0.0074   15.6   0.0   247   301   197   248   193   255 0.89 Histone deacetylase domain
Clp_N                PF02861.15    53 sp|Q5HL21|ALF1_STAEQ -            296      0.03   14.2   0.0   1   1   2.2e-05      0.11   12.4   0.0    20    44    16    40    15    43 0.89 Clp amino terminal domain
F_bP_aldolase        PF01116.15   287 sp|Q5HM97|ALF2_STAEQ -            286  1.3e-106  355.8   0.1   1   1    2e-110  1.5e-106  355.7   0.1     2   287     3   285     2   285 0.98 Fructose-bisphosphate aldolase class-II
Ala_racemase_N       PF01168.15   218 sp|Q5HME5|ALR_STAEQ  -            382   1.8e-53  181.2   0.0   1   1   3.3e-57   2.4e-53  180.9   0.0     1   218    13   229    13   229 0.93 Alanine racemase, N-terminal domain
Ala_racemase_C       PF00842.16   129 sp|Q5HME5|ALR_STAEQ  -            382   1.2e-42  144.4   0.4   1   1   2.7e-46     2e-42  143.6   0.4     3   128   246   368   244   369 0.97 Alanine racemase, C-terminal domain
Pribosyltran         PF00156.22   125 sp|Q5HNR6|APT_STAEQ  -            172   4.2e-18   65.2   0.2   1   1   7.1e-22   5.2e-18   64.9   0.2    17   125    36   148    19   148 0.88 Phosphoribosyl transferase domain
UPRTase              PF14681.1    207 sp|Q5HNR6|APT_STAEQ  -            172   0.00047   19.4   0.0   1   1   8.6e-08   0.00064   18.9   0.0   120   169   110   159    80   166 0.83 Uracil phosphoribosyltransferase
FGGY_C               PF02782.11   198 sp|Q5HLQ6|ARAB_STAEQ -            536     8e-36  123.5   0.0   1   1   1.6e-39   1.2e-35  122.9   0.0     3   195   284   477   282   479 0.91 FGGY family of carbohydrate kinases, C-terminal domain
FGGY_N               PF00370.16   245 sp|Q5HLQ6|ARAB_STAEQ -            536     8e-17   61.3   0.0   1   1   3.1e-20   2.3e-16   59.8   0.0     1   245     3   273     3   273 0.89 FGGY family of carbohydrate kinases, N-terminal domain
Amidinotransf        PF02274.12   281 sp|Q5HKU2|ARCA_STAEQ -            411   8.4e-95  317.0   0.0   1   1   6.5e-99   9.6e-95  316.8   0.0     2   281    21   408    20   408 0.99 Amidinotransferase
AA_kinase            PF00696.23   242 sp|Q5HKJ3|ARCC_STAEQ -            310   3.1e-26   92.3   0.1   1   1   2.4e-30   3.6e-26   92.1   0.1     2   241     3   291     2   292 0.89 Amino acid kinase family
AA_kinase            PF00696.23   242 sp|Q5HP23|ARGB_STAEQ -            245   4.7e-36  124.5   3.9   1   1   3.6e-40   5.3e-36  124.3   3.9     1   242     3   234     3   234 0.88 Amino acid kinase family
Semialdhyde_dh       PF01118.19   121 sp|Q5HP21|ARGC_STAEQ -            341   1.4e-24   86.7   0.0   1   1     5e-28   2.5e-24   85.9   0.0     2   113     3   132     2   140 0.90 Semialdehyde dehydrogenase, NAD binding domain
Semialdhyde_dhC      PF02774.13   184 sp|Q5HP21|ARGC_STAEQ -            341   4.8e-20   72.1   0.1   1   1   1.3e-23   6.6e-20   71.7   0.1     1   184   156   312   156   312 0.93 Semialdehyde dehydrogenase, dimerisation domain
DapB_N               PF01113.15   124 sp|Q5HP21|ARGC_STAEQ -            341     0.014   15.3   0.0   1   1   5.2e-06     0.026   14.4   0.0     1    92     1    92     1    96 0.72 Dihydrodipicolinate reductase, N-terminus
Aminotran_3          PF00202.16   339 sp|Q5HP24|ARGD_STAEQ -            375     4e-94  315.2   0.2   1   1   1.4e-97     5e-94  314.9   0.2     5   338    18   326    15   327 0.96 Aminotransferase class-III
Aminotran_5          PF00266.14   371 sp|Q5HP24|ARGD_STAEQ -            375   2.8e-06   26.3   0.0   1   1   1.4e-09   5.3e-06   25.4   0.0    50   179    74   209    48   217 0.86 Aminotransferase class-V
Aminotran_1_2        PF00155.16   363 sp|Q5HP24|ARGD_STAEQ -            375     0.015   14.2   0.0   1   1   6.6e-06     0.025   13.5   0.0    70   290    87   307    63   333 0.76 Aminotransferase class I and II
ArgJ                 PF01960.13   388 sp|Q5HP22|ARGJ_STAEQ -            397  2.5e-155  516.6  10.6   1   1  5.6e-159  2.8e-155  516.5  10.6     1   388    14   397    14   397 0.99 ArgJ family
RE_MjaI              PF09568.5    170 sp|Q5HP22|ARGJ_STAEQ -            397     0.028   13.9   0.1   1   1   1.5e-05     0.072   12.6   0.1   119   155   330   366   321   377 0.88 MjaI restriction endonuclease
Bcl-2                PF00452.14   101 sp|Q5HP22|ARGJ_STAEQ -            397     0.089   12.9   0.0   1   1   7.7e-05      0.38   10.8   0.0    37    63   301   326   254   360 0.77 Apoptosis regulator proteins, Bcl-2 family
Arg_repressor_C      PF02863.13    70 sp|Q5HP32|ARGR_STAEQ -            150   2.8e-27   93.9   0.0   1   1   9.5e-31   4.7e-27   93.2   0.0     2    69    81   148    80   149 0.96 Arginine repressor, C-terminal domain
Arg_repressor        PF01316.16    70 sp|Q5HP32|ARGR_STAEQ -            150   8.7e-27   92.4   0.3   1   1   2.4e-30   1.2e-26   92.0   0.3     2    68     3    69     2    71 0.97 Arginine repressor, DNA binding domain
HTH_11               PF08279.7     55 sp|Q5HP32|ARGR_STAEQ -            150     0.012   15.2   0.2   1   1   7.6e-06     0.037   13.6   0.2    25    40    35    50     7    55 0.90 HTH domain
Lyase_1              PF00206.15   312 sp|Q5HQK1|ARLY_STAEQ -            463   9.8e-74  248.3   0.1   1   1   3.5e-77   1.3e-73  247.9   0.1     1   312     8   302     8   302 0.97 Lyase
ASL_C2               PF14698.1     70 sp|Q5HQK1|ARLY_STAEQ -            463   2.4e-26   91.5   0.0   1   1     2e-29   7.6e-26   89.9   0.0     1    69   365   433   365   434 0.98 Argininosuccinate lyase C-terminal
Hpt                  PF01627.18    90 sp|Q5HQK1|ARLY_STAEQ -            463    0.0013   18.6   0.1   1   1   2.7e-06      0.01   15.8   0.0    25    46   319   343   303   348 0.79 Hpt domain
DUF1474              PF07342.6    100 sp|Q5HQK1|ARLY_STAEQ -            463     0.035   14.3   0.8   1   1   2.6e-05     0.097   12.9   0.8     4    82    56   133    53   150 0.81 Protein of unknown function (DUF1474)
EPSP_synthase        PF00275.15   419 sp|Q5HP79|AROA_STAEQ -            433  1.8e-121  405.5   0.2   1   1  1.4e-125    2e-121  405.3   0.2     3   419     9   425     7   425 0.93 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase)
DHQ_synthase         PF01761.15   261 sp|Q5HP78|AROB_STAEQ -            354     9e-88  293.5   0.2   1   1   3.2e-91   1.2e-87  293.1   0.2     2   260    62   316    61   317 0.97 3-dehydroquinate synthase
Fe-ADH               PF00465.14   366 sp|Q5HP78|AROB_STAEQ -            354   4.2e-17   61.8   0.1   1   1   2.6e-20   9.8e-17   60.6   0.1     4   285    14   276    12   294 0.87 Iron-containing alcohol dehydrogenase
Fe-ADH_2             PF13685.1    250 sp|Q5HP78|AROB_STAEQ -            354   2.4e-15   56.5   2.0   1   2   4.2e-18   1.6e-14   53.8   0.0     2   164    16   181    15   237 0.84 Iron-containing alcohol dehydrogenase
DUF1617              PF07761.7    143 sp|Q5HP78|AROB_STAEQ -            354     0.014   15.4   0.5   1   1   9.3e-06     0.035   14.1   0.1    44   111     6    77     2    95 0.82 Protein of unknown function (DUF1617)
Chorismate_synt      PF01264.16   346 sp|Q5HP77|AROC_STAEQ -            388    1e-133  445.1   1.7   1   1  8.1e-138  1.2e-133  444.9   1.7     1   346     1   364     1   364 0.98 Chorismate synthase
DHquinase_I          PF01487.10   224 sp|Q5HQR7|AROD_STAEQ -            238   2.7e-55  187.4   0.1   1   1     2e-59   2.9e-55  187.3   0.1    13   222    21   232     7   234 0.90 Type I 3-dehydroquinase
Shikimate_dh_N       PF08501.6     83 sp|Q5HNV1|AROE_STAEQ -            269   7.1e-31  106.0   0.2   1   1     3e-34   1.5e-30  105.0   0.2     1    83     5    87     5    87 0.99 Shikimate dehydrogenase substrate binding domain
Shikimate_DH         PF01488.15   135 sp|Q5HNV1|AROE_STAEQ -            269   1.5e-11   44.5   0.0   1   1   5.6e-15   2.8e-11   43.6   0.0     4    89   109   194   106   217 0.81 Shikimate / quinate 5-dehydrogenase
Malic_M              PF03949.10   255 sp|Q5HNV1|AROE_STAEQ -            269     0.057   12.9   0.1   2   2   3.5e-05      0.17   11.3   0.0    11    47   103   139   102   158 0.87 Malic enzyme, NAD binding domain
SKI                  PF01202.17   158 sp|Q5HP11|AROK_STAEQ -            170   1.1e-39  135.8   0.0   1   1   1.1e-42   1.2e-39  135.6   0.0     1   153    14   163    14   168 0.95 Shikimate kinase
AAA_18               PF13238.1    129 sp|Q5HP11|AROK_STAEQ -            170   1.9e-12   47.6   0.1   1   1   2.2e-15   2.3e-12   47.3   0.1     1   122     8   127     8   143 0.85 AAA domain
AAA_17               PF13207.1    121 sp|Q5HP11|AROK_STAEQ -            170     1e-08   36.0   0.1   1   1   1.5e-11   1.6e-08   35.4   0.1     2   109     8   115     7   152 0.63 AAA domain
tRNA_lig_kinase      PF08303.6    168 sp|Q5HP11|AROK_STAEQ -            170    0.0044   16.9   0.5   1   2   5.1e-05     0.054   13.3   0.0     3    47     9    52     6    63 0.80 tRNA ligase kinase domain
Cytidylate_kin2      PF13189.1    179 sp|Q5HP11|AROK_STAEQ -            170    0.0063   16.4   0.0   1   1     3e-05     0.032   14.1   0.0     3    59     9    63     8   157 0.73 Cytidylate kinase-like family
AAA                  PF00004.24   132 sp|Q5HP11|AROK_STAEQ -            170    0.0068   16.6   0.1   1   1   2.2e-05     0.023   14.8   0.1     1    74     8   114     8   148 0.61 ATPase family associated with various cellular activities (AAA)
AAA_33               PF13671.1    143 sp|Q5HP11|AROK_STAEQ -            170     0.011   15.6   0.0   1   2   0.00065      0.68    9.7   0.0     2    20     8    26     8    80 0.81 AAA domain
AAA_14               PF13173.1    128 sp|Q5HP11|AROK_STAEQ -            170     0.014   15.2   0.4   1   2   9.3e-05     0.099   12.5   0.0     4    56     7    54     5    81 0.74 AAA domain
AAA_22               PF13401.1    131 sp|Q5HP11|AROK_STAEQ -            170     0.016   15.3   0.1   1   1   3.7e-05     0.039   14.1   0.1     7    61     8    58     5   169 0.86 AAA domain
MNE1                 PF13762.1    145 sp|Q5HP11|AROK_STAEQ -            170     0.021   14.9   0.5   2   2   0.00021      0.22   11.5   0.2    36   107    62   132    57   158 0.83 Mitochondrial splicing apparatus component
CoaE                 PF01121.15   180 sp|Q5HP11|AROK_STAEQ -            170     0.026   13.8   0.0   1   1   4.8e-05     0.051   12.9   0.0     4    33     9    39     6    58 0.90 Dephospho-CoA kinase
AAA_5                PF07728.9    139 sp|Q5HP11|AROK_STAEQ -            170     0.046   13.4   0.0   1   1   7.2e-05     0.076   12.7   0.0     2    27     8    33     7    53 0.90 AAA domain (dynein-related subfamily)
Sigma54_activat      PF00158.21   168 sp|Q5HP11|AROK_STAEQ -            170      0.13   11.6   0.0   1   1   0.00022      0.23   10.9   0.0    21    62     4    49     1    54 0.80 Sigma-54 interaction domain
ArsB                 PF02040.10   423 sp|Q5HRI3|ARSB_STAEQ -            430  9.4e-214  710.0  49.0   1   1  2.9e-217  1.1e-213  709.9  49.0     1   423     5   427     5   427 1.00 Arsenical pump membrane protein
CitMHS               PF03600.11   351 sp|Q5HRI3|ARSB_STAEQ -            430     1e-18   67.0  44.0   1   1   3.9e-22   1.4e-18   66.5  44.0     2   319     8   345     4   371 0.82 Citrate transporter
Na_sulph_symp        PF00939.14   471 sp|Q5HRI3|ARSB_STAEQ -            430   1.6e-09   37.1  44.8   1   3   1.2e-10   4.4e-07   29.1  17.4   272   406     7   138     2   156 0.82 Sodium:sulfate symporter transmembrane region
Na_sulph_symp        PF00939.14   471 sp|Q5HRI3|ARSB_STAEQ -            430   1.6e-09   37.1  44.8   2   3   1.9e-06     0.007   15.2  10.7   208   357   168   319   153   338 0.74 Sodium:sulfate symporter transmembrane region
MLTD_N               PF06474.7     34 sp|Q5HRI3|ARSB_STAEQ -            430     0.075   13.2   0.0   1   1   8.9e-05      0.33   11.1   0.0    15    30   223   238   211   239 0.87 MltD lipid attachment motif
LMWPc                PF01451.16   138 sp|Q5HRI4|ARSC1_STAEQ -            132   3.4e-38  131.0   0.0   1   1   2.6e-42   3.8e-38  130.9   0.0     1   137     6   128     6   129 0.96 Low molecular weight phosphotyrosine protein phosphatase
LMWPc                PF01451.16   138 sp|Q5HKB7|ARSC2_STAEQ -            131   7.8e-39  133.1   0.0   1   1   1.7e-42   8.6e-39  133.0   0.0     1   137     6   128     6   129 0.95 Low molecular weight phosphotyrosine protein phosphatase
DUF989               PF06181.6    301 sp|Q5HKB7|ARSC2_STAEQ -            131      0.13   11.2   0.0   1   1   3.3e-05      0.17   10.9   0.0    28    62     5    39     3    54 0.89 Protein of unknown function (DUF989)
Polysacc_deac_1      PF01522.16   124 sp|Q5HKB7|ARSC2_STAEQ -            131      0.14   11.8   0.0   1   1   3.8e-05      0.19   11.3   0.0    47    73    33    71     3   130 0.69 Polysaccharide deacetylase
Asp23                PF03780.8    108 sp|Q5HM47|ASP23_STAEQ -            166     9e-34  116.0   4.1   1   1   1.9e-37   1.4e-33  115.3   4.1     3   108    38   143    37   143 0.97 Asp23 family
SeqA                 PF03925.8    190 sp|Q5HM47|ASP23_STAEQ -            166     0.016   14.9   2.4   2   2   9.4e-06      0.07   12.8   0.1    20    75   104   159    96   166 0.64 SeqA protein
Arginosuc_synth      PF00764.14   388 sp|Q5HQK0|ASSY_STAEQ -            401  1.3e-166  554.5   0.0   1   1  3.9e-170  1.4e-166  554.3   0.0     1   386     6   389     6   391 0.99 Arginosuccinate synthase
tRNA_Me_trans        PF03054.11   356 sp|Q5HQK0|ASSY_STAEQ -            401    0.0051   15.4   0.1   1   1   2.2e-06    0.0081   14.7   0.1     2    38     4    40     3    79 0.80 tRNA methyl transferase
QueC                 PF06508.8    210 sp|Q5HQK0|ASSY_STAEQ -            401     0.037   13.2   0.1   1   1   1.8e-05     0.068   12.4   0.1     1    60     4    61     4    75 0.77 Queuosine biosynthesis protein QueC
ThiI                 PF02568.9    197 sp|Q5HQK0|ASSY_STAEQ -            401      0.18   11.2   0.3   1   1   8.7e-05      0.32   10.4   0.0     5    36     4    35     1    55 0.85 Thiamine biosynthesis protein (ThiI)
KdpA                 PF03814.10   552 sp|Q5HK63|ATKA_STAEQ -            558  1.3e-223  743.0  40.6   1   1  2.1e-227  1.5e-223  742.8  40.6     1   551     3   554     3   555 0.99 Potassium-transporting ATPase A subunit
DUF4149              PF13664.1    101 sp|Q5HK63|ATKA_STAEQ -            558     0.017   15.1   1.0   2   5   2.3e-06     0.017   15.1   1.0    27    91    52   115    34   121 0.88 Domain of unknown function (DUF4149)
Hydrolase            PF00702.21   215 sp|Q5HK64|ATKB_STAEQ -            673   4.2e-36  125.3   0.5   1   1   1.1e-39   4.2e-36  125.3   0.5     1   215   298   523   298   523 0.82 haloacid dehalogenase-like hydrolase
E1-E2_ATPase         PF00122.15   230 sp|Q5HK64|ATKB_STAEQ -            673   5.2e-35  120.5   1.6   1   2   1.4e-38   5.2e-35  120.5   1.6     2   230    72   294    70   294 0.95 E1-E2 ATPase
HAD                  PF12710.2    192 sp|Q5HK64|ATKB_STAEQ -            673   1.6e-14   54.5   0.0   1   1   9.9e-18   3.7e-14   53.3   0.0     2   191   302   519   301   520 0.62 haloacid dehalogenase-like hydrolase
Hydrolase_3          PF08282.7    254 sp|Q5HK64|ATKB_STAEQ -            673   9.3e-07   28.6   1.2   3   3   4.5e-07    0.0017   18.0   0.6   205   241   506   542   494   549 0.88 haloacid dehalogenase-like hydrolase
KdpC                 PF02669.10   188 sp|Q5HK65|ATKC_STAEQ -            185   9.9e-53  178.6   0.0   1   1   2.3e-56   1.1e-52  178.4   0.0     2   188     2   185     1   185 0.92 K+-transporting ATPase, c chain
DUF3562              PF12085.3     66 sp|Q5HK65|ATKC_STAEQ -            185     0.059   13.1   1.0   2   2   2.9e-05      0.14   11.9   0.6     3    31   134   162   132   177 0.84 Protein of unknown function (DUF3562)
E3_binding           PF02817.12    39 sp|Q5HK65|ATKC_STAEQ -            185       0.1   12.2   1.6   2   2   0.00011      0.54    9.9   0.1     9    24   141   156   140   156 0.94 e3 binding domain
Amidase_2            PF01510.20   132 sp|Q5HQB9|ATL_STAEQ  -           1335   2.4e-14   53.5   1.3   1   1   3.2e-17   1.6e-13   50.8   1.3     4   123   351   472   348   485 0.84 N-acetylmuramoyl-L-alanine amidase
Glucosaminidase      PF01832.15   136 sp|Q5HQB9|ATL_STAEQ  -           1335   9.6e-08   32.2   5.0   3   3     2e-11   9.6e-08   32.2   5.0     3   133  1184  1317  1182  1320 0.81 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase
DGOK                 PF05035.7    287 sp|Q5HQB9|ATL_STAEQ  -           1335     0.024   13.4   0.6   2   2   0.00012      0.59    8.8   0.1    50    90   821   862   797   885 0.79 2-keto-3-deoxy-galactonokinase
ATP-synt_A           PF00119.15   215 sp|Q5HMB3|ATP6_STAEQ -            242   9.5e-58  195.2  19.2   1   1   1.5e-61   1.1e-57  195.0  19.2     3   215    19   236    17   236 0.94 ATP synthase A chain
DUF3671              PF12420.3    104 sp|Q5HMB3|ATP6_STAEQ -            242      0.29   11.1   0.1   2   3   3.9e-05      0.29   11.1   0.1    45   100    84   139    69   141 0.84 Protein of unknown function
ATP-synt_ab          PF00006.20   215 sp|Q5HMB7|ATPA_STAEQ -            503   6.1e-69  231.8   0.0   1   1   3.2e-72   9.5e-69  231.1   0.0     1   215   148   364   148   364 0.98 ATP synthase alpha/beta family, nucleotide-binding domain
ATP-synt_ab_C        PF00306.22   113 sp|Q5HMB7|ATPA_STAEQ -            503   4.3e-22   78.7   0.3   1   1   3.7e-25   1.1e-21   77.4   0.1     1   109   376   473   376   477 0.88 ATP synthase alpha/beta chain, C terminal domain
ATP-synt_ab_N        PF02874.18    69 sp|Q5HMB7|ATPA_STAEQ -            503   1.1e-18   67.2   2.9   1   1   9.8e-22   2.9e-18   65.8   2.9     4    69    27    92    24    92 0.98 ATP synthase alpha/beta family, beta-barrel domain
HAS-barrel           PF09378.5     91 sp|Q5HMB7|ATPA_STAEQ -            503   1.7e-08   34.2   2.2   1   1   1.6e-11   4.8e-08   32.8   2.2     5    90    28    89    25   109 0.82 HAS barrel domain
KaiC                 PF06745.8    227 sp|Q5HMB7|ATPA_STAEQ -            503   6.1e-06   25.5   0.2   1   1   6.1e-09   1.8e-05   23.9   0.1     2    70   147   212   146   215 0.93 KaiC
ATP-synt_ab          PF00006.20   215 sp|Q5HMB9|ATPB_STAEQ -            470   2.7e-67  226.4   0.0   1   1   4.6e-70   4.3e-67  225.7   0.0     1   215   134   348   134   348 0.98 ATP synthase alpha/beta family, nucleotide-binding domain
ATP-synt_ab_C        PF00306.22   113 sp|Q5HMB9|ATPB_STAEQ -            470   2.9e-27   95.3   0.3   1   1   5.7e-30   5.3e-27   94.5   0.3     1   107   361   462   361   468 0.93 ATP synthase alpha/beta chain, C terminal domain
ATP-synt_ab_N        PF02874.18    69 sp|Q5HMB9|ATPB_STAEQ -            470   1.2e-24   86.2   1.2   1   1   3.2e-27     3e-24   85.0   1.2     1    69     6    77     6    77 0.96 ATP synthase alpha/beta family, beta-barrel domain
DUF258               PF03193.11   161 sp|Q5HMB9|ATPB_STAEQ -            470   8.7e-05   21.7   0.0   1   1   1.7e-07   0.00016   20.9   0.0    24    90   137   204   119   209 0.82 Protein of unknown function, DUF258
AAA_25               PF13481.1    194 sp|Q5HMB9|ATPB_STAEQ -            470   0.00014   21.3   0.0   1   1   3.4e-07   0.00031   20.1   0.0     9   154   126   254   118   268 0.63 AAA domain
AAA_22               PF13401.1    131 sp|Q5HMB9|ATPB_STAEQ -            470    0.0011   19.1   0.0   1   1   1.1e-05    0.0099   16.0   0.0     9   100   153   255   147   271 0.80 AAA domain
AAA                  PF00004.24   132 sp|Q5HMB9|ATPB_STAEQ -            470    0.0034   17.6   0.2   1   2   4.4e-05     0.041   14.0   0.0     3    74   153   258   151   301 0.78 ATPase family associated with various cellular activities (AAA)
Arch_ATPase          PF01637.13   234 sp|Q5HMB9|ATPB_STAEQ -            470    0.0047   16.6   0.0   1   1   9.6e-06    0.0089   15.7   0.0    25   147   153   271   150   282 0.65 Archaeal ATPase
ABC_tran             PF00005.22   137 sp|Q5HMB9|ATPB_STAEQ -            470     0.011   16.0   0.1   1   1   4.4e-05     0.041   14.1   0.0    10    49   147   195   145   271 0.79 ABC transporter
MobB                 PF03205.9    140 sp|Q5HMB9|ATPB_STAEQ -            470     0.012   15.2   0.1   1   2   0.00096      0.89    9.2   0.0     6    29   154   177   150   204 0.76 Molybdopterin guanine dinucleotide synthesis protein B
AAA_16               PF13191.1    185 sp|Q5HMB9|ATPB_STAEQ -            470     0.014   15.3   0.0   1   1   4.3e-05      0.04   13.8   0.0    29    58   153   184   148   209 0.82 AAA ATPase domain
NACHT                PF05729.7    166 sp|Q5HMB9|ATPB_STAEQ -            470     0.016   14.9   0.4   1   1     4e-05     0.037   13.6   0.1     6    28   154   176   151   195 0.89 NACHT domain
KaiC                 PF06745.8    227 sp|Q5HMB9|ATPB_STAEQ -            470      0.02   14.0   0.6   1   1   5.2e-05     0.048   12.7   0.6     2    72   133   204   120   210 0.88 KaiC
NB-ARC               PF00931.17   287 sp|Q5HMB9|ATPB_STAEQ -            470     0.035   12.9   0.7   1   2   0.00013      0.12   11.2   0.1    22    57   151   185   140   202 0.75 NB-ARC domain
RNA_helicase         PF00910.17   107 sp|Q5HMB9|ATPB_STAEQ -            470      0.06   13.5   0.0   1   1   0.00017      0.15   12.2   0.0     3    26   153   176   151   207 0.76 RNA helicase
KAP_NTPase           PF07693.9    325 sp|Q5HMB9|ATPB_STAEQ -            470      0.15   11.0   0.0   1   1    0.0002      0.19   10.6   0.0    22    48   150   407   137   456 0.65 KAP family P-loop domain
OSCP                 PF00213.13   172 sp|Q5HMB6|ATPD_STAEQ -            179   6.6e-42  143.2   4.8   1   1     3e-45   7.4e-42  143.1   4.8     1   171     4   174     4   175 0.99 ATP synthase delta (OSCP) subunit
DUF148               PF02520.12   114 sp|Q5HMB6|ATPD_STAEQ -            179     0.018   14.8   1.3   1   2   2.1e-05     0.051   13.3   0.1    66   106    39    80    19    86 0.85 Domain of unknown function DUF148
DUF1542              PF07564.6     70 sp|Q5HMB6|ATPD_STAEQ -            179     0.077   13.0   0.1   1   2   3.1e-05     0.077   13.0   0.1     1    28    41    68    41    70 0.90 Domain of Unknown Function (DUF1542)
FtsZ_C               PF12327.3     95 sp|Q5HMB6|ATPD_STAEQ -            179      0.15   12.1   0.7   1   1   0.00018      0.44   10.6   0.5    46    92   113   158   107   161 0.84 FtsZ family, C-terminal domain
Baculo_IE-1          PF05290.6    141 sp|Q5HMB6|ATPD_STAEQ -            179      0.21   11.3   1.7   1   1   0.00013      0.32   10.7   1.2     6    82    67   145    61   149 0.84 Baculovirus immediate-early protein (IE-0)
ATP-synt_DE_N        PF02823.11    80 sp|Q5HMC0|ATPE_STAEQ -            134   2.5e-23   81.6   0.4   1   1   6.4e-27   3.2e-23   81.2   0.4     1    80     4    83     4    83 0.96 ATP synthase, Delta/Epsilon chain, beta-sandwich domain
ATP-synt_DE          PF00401.15    48 sp|Q5HMC0|ATPE_STAEQ -            134   3.4e-13   49.2   8.1   1   1     1e-16     5e-13   48.6   8.1     1    47    87   133    87   134 0.95 ATP synthase, Delta/Epsilon chain, long alpha-helix domain
DUF2016              PF09436.5     73 sp|Q5HMC0|ATPE_STAEQ -            134     0.006   16.1   0.0   1   1   2.7e-06     0.013   14.9   0.0     5    58    36    88    34    91 0.88 Domain of unknown function (DUF2016)
ATP-synt_B           PF00430.13   132 sp|Q5HMB5|ATPF_STAEQ -            171   1.8e-33  115.1  13.3   1   1   2.4e-36   2.6e-33  114.6  13.3     3   131    20   148    18   149 0.98 ATP synthase B/B' CF(0)
Mt_ATP-synt_B        PF05405.9    163 sp|Q5HMB5|ATPF_STAEQ -            171   3.9e-07   29.6   9.8   1   1   7.6e-10     8e-07   28.6   9.8    18   147    21   142    19   163 0.91 Mitochondrial ATP synthase B chain precursor (ATP-synt_B)
HrpE                 PF06188.7    191 sp|Q5HMB5|ATPF_STAEQ -            171     0.023   14.4   6.9   1   1     3e-05     0.032   13.9   6.9     8    66    76   133    60   169 0.79 HrpE/YscL/FliH and V-type ATPase subunit E
RapA_C               PF12137.3    362 sp|Q5HMB5|ATPF_STAEQ -            171     0.052   12.3  13.4   1   2   3.8e-05     0.041   12.7  11.1   236   314    40   121    32   142 0.80 RNA polymerase recycling family C-terminal
DUF1189              PF06691.6    250 sp|Q5HMB5|ATPF_STAEQ -            171      0.11   11.7   5.9   1   1   0.00019      0.21   10.9   5.9    31   136    20   144    12   166 0.77 Protein of unknown function (DUF1189)
vATP-synt_E          PF01991.13   198 sp|Q5HMB5|ATPF_STAEQ -            171      0.22   10.7  19.9   1   1   3.1e-05     0.033   13.4  16.0     4    86    78   161    75   168 0.92 ATP synthase (E/31 kDa) subunit
DUF4407              PF14362.1    301 sp|Q5HMB5|ATPF_STAEQ -            171      0.38    9.6   7.6   1   1    0.0004      0.43    9.5   7.6   113   227    43   157    20   171 0.74 Domain of unknown function (DUF4407)
HBS1_N               PF08938.5     79 sp|Q5HMB5|ATPF_STAEQ -            171      0.62   10.2   6.8   1   1   0.00018      0.19   11.8   3.5     4    52    55   106    49   130 0.80 HBS1 N-terminus
DivIVA               PF05103.8    131 sp|Q5HMB5|ATPF_STAEQ -            171      0.89    9.6  19.8   1   1   0.00054      0.57   10.2  18.1    28   114    42   126    41   141 0.78 DivIVA protein
Endonuc_Holl         PF10107.4    156 sp|Q5HMB5|ATPF_STAEQ -            171       8.5    6.0  12.4   1   2   0.00046      0.49   10.0   3.8     2    69    27    94    25   103 0.88 Endonuclease related to archaeal Holliday junction resolvase
ATP-synt             PF00231.14   290 sp|Q5HMB8|ATPG_STAEQ -            288  2.2e-102  342.3   4.0   1   1  1.7e-106  2.5e-102  342.1   4.0     1   290     2   287     2   287 0.99 ATP synthase
ATP-synt_C           PF00137.16    66 sp|Q5HMB4|ATPL_STAEQ -             70   5.9e-20   70.9  14.2   1   1   4.2e-24   6.2e-20   70.8  14.2     1    63     1    67     1    70 0.97 ATP synthase subunit C
FMN_red              PF03358.10   152 sp|Q5HRI7|AZO1_STAEQ -            188     4e-27   94.5   0.0   1   1   6.9e-31   5.1e-27   94.2   0.0     1   145     1   142     1   149 0.87 NADPH-dependent FMN reductase
Flavodoxin_2         PF02525.12   199 sp|Q5HRI7|AZO1_STAEQ -            188   2.1e-11   43.7   0.0   1   1   3.1e-15   2.3e-11   43.5   0.0     1   105     1    99     1   150 0.87 Flavodoxin-like fold
GMC_oxred_N          PF00732.14   296 sp|Q5HL11|BETA_STAEQ -            572     4e-78  262.5   0.0   1   1   3.7e-81   4.9e-78  262.2   0.0     1   295     8   304     8   305 0.96 GMC oxidoreductase
GMC_oxred_C          PF05199.8    144 sp|Q5HL11|BETA_STAEQ -            572   5.9e-36  123.9   0.0   1   1   7.1e-39   9.5e-36  123.2   0.0     2   144   396   534   395   534 0.97 GMC oxidoreductase
FAD_binding_2        PF00890.19   417 sp|Q5HL11|BETA_STAEQ -            572   1.4e-08   33.9   0.1   1   2   0.00024      0.33    9.7   0.0     1    32     9    41     9    46 0.89 FAD binding domain
FAD_binding_2        PF00890.19   417 sp|Q5HL11|BETA_STAEQ -            572   1.4e-08   33.9   0.1   2   2   4.2e-08   5.6e-05   22.1   0.0   149   205   211   269   162   281 0.81 FAD binding domain
DAO                  PF01266.19   358 sp|Q5HL11|BETA_STAEQ -            572     1e-05   24.6   0.0   1   2   6.3e-05     0.085   11.7   0.0     1    32     9    41     9   101 0.96 FAD dependent oxidoreductase
DAO                  PF01266.19   358 sp|Q5HL11|BETA_STAEQ -            572     1e-05   24.6   0.0   2   2   0.00011      0.15   10.9   0.0   155   243   211   312   188   369 0.79 FAD dependent oxidoreductase
Pyr_redox_3          PF13738.1    203 sp|Q5HL11|BETA_STAEQ -            572   2.7e-05   24.3   0.0   2   2     3e-06     0.004   17.2   0.0    79   161   197   289   161   302 0.73 Pyridine nucleotide-disulphide oxidoreductase
Pyr_redox_2          PF07992.9    201 sp|Q5HL11|BETA_STAEQ -            572   0.00013   21.9   0.0   1   2   7.5e-05       0.1   12.4   0.0     1    53     9    64     9    96 0.74 Pyridine nucleotide-disulphide oxidoreductase
NAD_binding_8        PF13450.1     68 sp|Q5HL11|BETA_STAEQ -            572    0.0011   18.9   0.2   1   1   2.4e-06    0.0032   17.4   0.2     1    29    12    41    12    42 0.92 NAD(P)-binding Rossmann-like domain
HI0933_like          PF03486.9    409 sp|Q5HL11|BETA_STAEQ -            572     0.018   13.5   0.0   1   2   0.00019      0.26    9.7   0.0     2    33     9    41     8    43 0.84 HI0933-like protein
Lycopene_cycl        PF05834.7    374 sp|Q5HL11|BETA_STAEQ -            572      0.03   13.2   0.0   1   1   3.5e-05     0.047   12.6   0.0     1    36     9    43     9    52 0.88 Lycopene cyclase protein
K_oxygenase          PF13434.1    341 sp|Q5HL11|BETA_STAEQ -            572       0.1   11.4   0.0   2   2   0.00058      0.78    8.5   0.0    99   166   207   272   203   291 0.83 L-lysine 6-monooxygenase (NADPH-requiring)
GAF_3                PF13492.1    129 sp|Q5HL11|BETA_STAEQ -            572      0.16   12.1   0.0   1   1   0.00027      0.36   10.9   0.0    41    86   449   494   409   504 0.85 GAF domain
BATS                 PF06968.8     93 sp|Q5HKJ7|BIOB_STAEQ -            321   2.7e-27   94.4   0.0   1   1   9.5e-31   7.1e-27   93.0   0.0     1    92   229   318   229   319 0.97 Biotin and Thiamin Synthesis associated domain
Radical_SAM          PF04055.16   166 sp|Q5HKJ7|BIOB_STAEQ -            321   1.8e-15   57.4   2.0   1   2   6.6e-19   4.9e-15   56.0   1.7     6   163    62   217    59   220 0.82 Radical SAM superfamily
AAA_26               PF13500.1    199 sp|Q5HKF0|BIOD_STAEQ -            223   9.5e-26   90.6   0.0   1   1   4.7e-29   1.2e-25   90.3   0.0     2   185     2   197     1   206 0.87 AAA domain
CbiA                 PF01656.18   195 sp|Q5HKF0|BIOD_STAEQ -            223   1.6e-10   40.7   0.1   1   1   1.1e-13   2.6e-10   40.0   0.1     1   179     3   195     3   214 0.70 CobQ/CobB/MinD/ParA nucleotide binding domain
DUF1611              PF07755.6    301 sp|Q5HKF0|BIOD_STAEQ -            223   9.8e-05   21.1   0.1   1   2   2.3e-06    0.0056   15.3   0.0   115   147     3    35     1    44 0.90 Protein of unknown function (DUF1611)
MobB                 PF03205.9    140 sp|Q5HKF0|BIOD_STAEQ -            223   0.00066   19.3   0.1   1   2   3.7e-06    0.0092   15.6   0.0     5    36     5    37     1    44 0.84 Molybdopterin guanine dinucleotide synthesis protein B
Thymidylate_kin      PF02223.12   186 sp|Q5HKF0|BIOD_STAEQ -            223     0.052   12.9   0.0   1   1   4.4e-05      0.11   11.8   0.0     7    39    12    44    11    70 0.94 Thymidylate kinase
cobW                 PF02492.14   178 sp|Q5HKF0|BIOD_STAEQ -            223     0.082   12.3   0.1   1   1   4.9e-05      0.12   11.7   0.1    72   127    92   151    82   198 0.64 CobW/HypB/UreG, nucleotide-binding domain
BioW                 PF03744.8    239 sp|Q5HKF3|BIOW_STAEQ -            228   1.1e-81  273.7   0.1   1   1   1.7e-85   1.3e-81  273.6   0.1     1   235     2   222     2   227 0.98 6-carboxyhexanoate--CoA ligase
DUF2089              PF09862.4    113 sp|Q5HKF3|BIOW_STAEQ -            228     0.029   14.1   0.8   1   2   2.9e-05      0.22   11.3   0.1    11    53     4    47     1    58 0.86 Protein of unknown function (DUF2089)
Branch_AA_trans      PF05525.8    428 sp|Q5HPD5|BRNQL_STAEQ -            447    2e-135  451.6  43.5   1   1  1.7e-139  2.5e-135  451.3  43.5     2   425     2   434     1   437 0.96 Branched-chain amino acid transport protein
GSHPx                PF00255.14   108 sp|Q5HKZ3|BSAA_STAEQ -            158   3.3e-33  113.3   0.8   1   1   8.9e-37   4.4e-33  112.8   0.8     1   108     3   110     3   110 0.99 Glutathione peroxidase
AhpC-TSA             PF00578.16   124 sp|Q5HKZ3|BSAA_STAEQ -            158    0.0024   17.5   0.3   1   1   2.1e-06      0.01   15.5   0.3     7    71     5    67     2   139 0.77 AhpC/TSA family
adh_short            PF00106.20   167 sp|Q5HKG6|BUTA_STAEQ -            257   8.9e-29  100.5   0.1   1   1   7.1e-32   1.2e-28  100.1   0.1     1   166     3   170     3   171 0.97 short chain dehydrogenase
adh_short_C2         PF13561.1    241 sp|Q5HKG6|BUTA_STAEQ -            257   2.8e-26   92.7   0.2   1   1   2.1e-29   3.5e-26   92.4   0.2     6   240    12   254     9   255 0.93 Enoyl-(Acyl carrier protein) reductase
KR                   PF08659.5    181 sp|Q5HKG6|BUTA_STAEQ -            257   6.2e-09   35.7   0.1   1   2   1.1e-11   1.9e-08   34.1   0.1     2   117     4   115     4   178 0.85 KR domain
3HCDH_N              PF02737.13   180 sp|Q5HKG6|BUTA_STAEQ -            257   6.7e-05   22.6   0.1   1   1   9.1e-08   0.00015   21.4   0.1     7    65    11    70     4    94 0.77 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain
Polysacc_synt_2      PF02719.10   294 sp|Q5HKG6|BUTA_STAEQ -            257   9.8e-05   21.3   0.5   1   1   7.2e-08   0.00012   21.1   0.5     2   122     6   128     5   171 0.76 Polysaccharide biosynthesis protein
Epimerase            PF01370.16   236 sp|Q5HKG6|BUTA_STAEQ -            257     0.006   16.0   0.2   1   1   7.3e-06     0.012   15.0   0.2     2   157     6   169     5   188 0.72 NAD dependent epimerase/dehydratase family
Ubie_methyltran      PF01209.13   233 sp|Q5HKG6|BUTA_STAEQ -            257     0.021   13.9   0.1   1   1   1.9e-05     0.032   13.3   0.1    56   112     9    66     2   105 0.75 ubiE/COQ5 methyltransferase family
APG6                 PF04111.7    315 sp|Q5HKG6|BUTA_STAEQ -            257      0.05   12.6   0.3   1   1   4.8e-05     0.079   11.9   0.3    65   147    38   121    31   127 0.89 Autophagy protein Apg6
Methyltransf_31      PF13847.1    152 sp|Q5HKG6|BUTA_STAEQ -            257      0.08   12.5   1.4   1   1   8.7e-05      0.14   11.7   1.3    15    83    12    89     9   174 0.74 Methyltransferase domain
CPSase_sm_chain      PF00988.17   131 sp|Q5HPY9|CARA_STAEQ -            366   1.4e-53  179.9   0.0   1   1   4.1e-57     2e-53  179.3   0.0     2   128     4   130     3   133 0.98 Carbamoyl-phosphate synthase small chain, CPSase domain
GATase               PF00117.23   192 sp|Q5HPY9|CARA_STAEQ -            366   9.7e-48  162.1   0.0   1   1     3e-51   1.5e-47  161.5   0.0     2   191   176   352   175   353 0.96 Glutamine amidotransferase class-I
Peptidase_C26        PF07722.8    217 sp|Q5HPY9|CARA_STAEQ -            366   6.7e-08   32.2   0.1   2   2   5.3e-09   2.6e-05   23.7   0.1   105   217   240   335   216   335 0.73 Peptidase C26
CPSase_L_D2          PF02786.12   211 sp|Q5HPY8|CARB_STAEQ -           1057  6.5e-121  401.3   0.4   1   2   5.4e-82   5.4e-79  264.3   0.0     1   210   128   333   128   334 0.99 Carbamoyl-phosphate synthase L chain, ATP binding domain
CPSase_L_D2          PF02786.12   211 sp|Q5HPY8|CARB_STAEQ -           1057  6.5e-121  401.3   0.4   2   2   1.8e-42   1.7e-39  135.2   0.1     1   210   666   867   666   868 0.96 Carbamoyl-phosphate synthase L chain, ATP binding domain
CPSase_L_chain       PF00289.17   110 sp|Q5HPY8|CARB_STAEQ -           1057   3.9e-46  155.6   0.5   1   2     9e-24   8.9e-21   74.0   0.0     1   110     6   123     6   123 0.96 Carbamoyl-phosphate synthase L chain, N-terminal domain
CPSase_L_chain       PF00289.17   110 sp|Q5HPY8|CARB_STAEQ -           1057   3.9e-46  155.6   0.5   2   2   2.5e-25   2.5e-22   79.0   0.0     2   109   551   660   550   661 0.97 Carbamoyl-phosphate synthase L chain, N-terminal domain
ATP-grasp_4          PF13535.1    184 sp|Q5HPY8|CARB_STAEQ -           1057   1.3e-45  155.3   0.0   1   2   5.5e-22   5.4e-19   68.6   0.0     3   182   127   306   125   308 0.90 ATP-grasp domain
ATP-grasp_4          PF13535.1    184 sp|Q5HPY8|CARB_STAEQ -           1057   1.3e-45  155.3   0.0   2   2   7.8e-27   7.7e-24   84.4   0.0     2   179   664   837   663   840 0.96 ATP-grasp domain
CPSase_L_D3          PF02787.14   123 sp|Q5HPY8|CARB_STAEQ -           1057     9e-45  151.4   0.6   1   1   2.3e-47   2.3e-44  150.0   0.6     1   123   420   540   420   540 0.98 Carbamoyl-phosphate synthetase large chain, oligomerisation domain
ATPgrasp_Ter         PF15632.1    330 sp|Q5HPY8|CARB_STAEQ -           1057   1.4e-34  119.3   0.0   1   3   2.5e-09   2.5e-06   26.4   0.0    24   176    42   194    28   221 0.78 ATP-grasp in the biosynthetic pathway with Ter operon
ATPgrasp_Ter         PF15632.1    330 sp|Q5HPY8|CARB_STAEQ -           1057   1.4e-34  119.3   0.0   2   3   3.7e-08   3.6e-05   22.6   0.0   245   322   266   346   256   353 0.85 ATP-grasp in the biosynthetic pathway with Ter operon
ATPgrasp_Ter         PF15632.1    330 sp|Q5HPY8|CARB_STAEQ -           1057   1.4e-34  119.3   0.0   3   3   1.9e-21   1.9e-18   66.2   0.0    39   311   603   868   573   885 0.80 ATP-grasp in the biosynthetic pathway with Ter operon
MGS                  PF02142.17    95 sp|Q5HPY8|CARB_STAEQ -           1057   1.3e-21   76.3   1.0   2   2   3.4e-23   3.4e-20   71.7   0.3     1    95   949  1035   949  1035 0.92 MGS-like domain
ATP-grasp_3          PF02655.9    161 sp|Q5HPY8|CARB_STAEQ -           1057   2.3e-21   76.3   0.9   1   2   1.2e-09   1.1e-06   28.5   0.1     6   158   130   303   126   306 0.78 ATP-grasp domain
ATP-grasp_3          PF02655.9    161 sp|Q5HPY8|CARB_STAEQ -           1057   2.3e-21   76.3   0.9   2   2   4.1e-15   4.1e-12   46.2   0.1     3   157   666   836   664   840 0.74 ATP-grasp domain
Dala_Dala_lig_C      PF07478.8    203 sp|Q5HPY8|CARB_STAEQ -           1057   1.3e-18   67.1   0.1   1   2   2.1e-09   2.1e-06   27.3   0.0    24   173   154   301   135   313 0.79 D-ala D-ala ligase C-terminus
Dala_Dala_lig_C      PF07478.8    203 sp|Q5HPY8|CARB_STAEQ -           1057   1.3e-18   67.1   0.1   2   2   2.5e-12   2.5e-09   36.8   0.0    24   173   692   835   673   858 0.83 D-ala D-ala ligase C-terminus
ATP-grasp            PF02222.17   172 sp|Q5HPY8|CARB_STAEQ -           1057   5.8e-17   61.5   0.0   1   2   5.8e-11   5.7e-08   32.2   0.0     2   161   137   303   135   311 0.89 ATP-grasp domain
ATP-grasp            PF02222.17   172 sp|Q5HPY8|CARB_STAEQ -           1057   5.8e-17   61.5   0.0   2   2   2.7e-09   2.6e-06   26.8   0.0     3   161   676   837   674   840 0.84 ATP-grasp domain
GARS_A               PF01071.14   194 sp|Q5HPY8|CARB_STAEQ -           1057   1.4e-15   57.3   0.1   1   2   1.7e-05     0.017   14.7   0.0     4   105   130   227   127   284 0.86 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain
GARS_A               PF01071.14   194 sp|Q5HPY8|CARB_STAEQ -           1057   1.4e-15   57.3   0.1   2   2   4.6e-13   4.6e-10   39.3   0.0     8   188   672   836   666   839 0.88 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain
RimK                 PF08443.6    190 sp|Q5HPY8|CARB_STAEQ -           1057   4.2e-11   42.6   0.1   2   3   1.5e-05     0.015   14.7   0.0    10    87   135   209   126   325 0.68 RimK-like ATP-grasp domain
RimK                 PF08443.6    190 sp|Q5HPY8|CARB_STAEQ -           1057   4.2e-11   42.6   0.1   3   3     1e-07    0.0001   21.8   0.0     3   184   666   854   664   860 0.73 RimK-like ATP-grasp domain
ATP-grasp_5          PF13549.1    222 sp|Q5HPY8|CARB_STAEQ -           1057   3.8e-06   26.2   0.0   2   2   6.1e-06    0.0061   15.8   0.0    12    52   667   707   658   709 0.92 ATP-grasp domain
ATP-grasp_2          PF08442.5    202 sp|Q5HPY8|CARB_STAEQ -           1057   0.00016   21.1   0.0   2   2   0.00048      0.48    9.7   0.0     9    54   672   716   668   736 0.86 ATP-grasp domain
PA                   PF02225.17   101 sp|Q5HPY8|CARB_STAEQ -           1057     0.042   13.5   0.1   1   1   0.00029      0.29   10.8   0.0    15    70   533   598   514   608 0.72 PA domain
Catalase             PF00199.14   384 sp|Q5HPK8|CATA_STAEQ -            504  1.9e-174  579.8   0.5   1   1  3.3e-178  2.5e-174  579.4   0.5     4   380    12   394     9   397 0.97 Catalase
Catalase-rel         PF06628.7     68 sp|Q5HPK8|CATA_STAEQ -            504   2.7e-23   81.5   0.0   1   1   7.8e-27   5.8e-23   80.5   0.0     1    68   418   484   418   484 0.97 Catalase-related immune-responsive
PolyA_pol            PF01743.15   126 sp|Q5HP86|CCA_STAEQ  -            400   2.4e-36  124.7   1.2   1   1   7.6e-40   3.7e-36  124.0   0.5     1   126    23   143    23   143 0.98 Poly A polymerase head domain
tRNA_NucTran2_2      PF13735.1    149 sp|Q5HP86|CCA_STAEQ  -            400   9.5e-24   83.9   5.4   1   1   3.5e-27   1.7e-23   83.0   5.4    10   149   247   394   240   394 0.84 tRNA nucleotidyltransferase domain 2 putative
PolyA_pol_RNAbd      PF12627.2     64 sp|Q5HP86|CCA_STAEQ  -            400   3.4e-12   45.7   0.0   1   2   2.2e-15   1.1e-11   44.1   0.0     1    60   170   228   170   231 0.95 Probable RNA and SrmB- binding site of polymerase A
Pyr_redox_2          PF07992.9    201 sp|Q5HQI9|CDR_STAEQ  -            438   5.4e-32  111.3   0.1   1   1   6.6e-35   7.6e-32  110.8   0.1     1   199     3   281     3   283 0.94 Pyridine nucleotide-disulphide oxidoreductase
Pyr_redox            PF00070.22    80 sp|Q5HQI9|CDR_STAEQ  -            438   1.8e-15   57.0   2.5   3   3   2.2e-17   2.5e-14   53.4   0.0     1    72   150   221   150   229 0.93 Pyridine nucleotide-disulphide oxidoreductase
Pyr_redox_dim        PF02852.17   110 sp|Q5HQI9|CDR_STAEQ  -            438   1.3e-09   38.0   0.0   1   1   2.3e-12   2.7e-09   37.0   0.0     4   103   326   424   323   429 0.89 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain
Pyr_redox_3          PF13738.1    203 sp|Q5HQI9|CDR_STAEQ  -            438   5.6e-08   33.0   0.2   1   1   1.3e-10   1.5e-07   31.7   0.2    90   200    66   181    53   184 0.75 Pyridine nucleotide-disulphide oxidoreductase
K_oxygenase          PF13434.1    341 sp|Q5HQI9|CDR_STAEQ  -            438   2.1e-05   23.5   0.3   2   2   1.4e-05     0.016   14.1   0.0   186   235   144   191   119   215 0.84 L-lysine 6-monooxygenase (NADPH-requiring)
NAD_binding_8        PF13450.1     68 sp|Q5HQI9|CDR_STAEQ  -            438    0.0043   17.0   0.0   1   2   0.00011      0.13   12.3   0.0     1    32     6    39     6    63 0.88 NAD(P)-binding Rossmann-like domain
ApbA                 PF02558.11   151 sp|Q5HQI9|CDR_STAEQ  -            438     0.011   15.2   0.5   1   1   4.4e-05      0.05   13.0   0.0     2    89   152   251   151   264 0.78 Ketopantoate reductase PanE/ApbA
Shikimate_DH         PF01488.15   135 sp|Q5HQI9|CDR_STAEQ  -            438     0.012   15.7   0.3   1   1   6.3e-05     0.072   13.1   0.1     9    56   145   190   137   251 0.77 Shikimate / quinate 5-dehydrogenase
NAD_binding_7        PF13241.1    103 sp|Q5HQI9|CDR_STAEQ  -            438     0.012   15.8   0.0   2   2   9.8e-05      0.11   12.7   0.0     3    65   144   234   142   258 0.63 Putative NAD(P)-binding
3HCDH_N              PF02737.13   180 sp|Q5HQI9|CDR_STAEQ  -            438     0.017   14.7   0.0   1   1   2.6e-05      0.03   13.9   0.0     3    86   152   237   150   242 0.85 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain
YonK                 PF09642.5     62 sp|Q5HQI9|CDR_STAEQ  -            438      0.13   11.9   1.1   1   1   0.00049      0.56    9.9   0.2    21    61   195   237   177   238 0.69 YonK protein
CTP_transf_1         PF01148.15   259 sp|Q5HPT0|CDSA_STAEQ -            260   2.7e-65  220.6  26.6   1   1   2.2e-69   3.3e-65  220.3  26.6     1   256     2   257     2   259 0.96 Cytidylyltransferase family
Cpn10                PF00166.16    93 sp|Q5HMZ0|CH10_STAEQ -             94     1e-32  111.8   1.5   1   1   1.5e-36   1.1e-32  111.7   1.5     2    93     2    93     1    93 0.98 Chaperonin 10 Kd subunit
Peptidase_S24        PF00717.18    70 sp|Q5HMZ0|CH10_STAEQ -             94     0.037   13.6   0.2   2   2   2.4e-05      0.17   11.5   0.0     9    39    56    88    54    93 0.87 Peptidase S24-like
Cpn60_TCP1           PF00118.19   485 sp|Q5HMZ1|CH60_STAEQ -            539  1.2e-124  416.5  12.2   1   1  1.9e-128  1.4e-124  416.4  12.2     1   483    22   520    22   522 0.93 TCP-1/cpn60 chaperonin family
LrgA                 PF03788.9     96 sp|Q5HL70|CIDA_STAEQ -            130   2.4e-24   84.8   8.8   1   1   4.9e-28   2.4e-24   84.8   8.8     2    95    21   114    20   115 0.97 LrgA family
DUF3087              PF11286.3    165 sp|Q5HL70|CIDA_STAEQ -            130         3    7.0   5.5   1   2    0.0001       0.5    9.5   1.3    35    75    17    58     3    61 0.79 Protein of unknown function (DUF3087)
LrgB                 PF04172.11   215 sp|Q5HL71|CIDB_STAEQ -            229   2.1e-72  242.7  16.0   1   1   4.8e-76   2.4e-72  242.6  16.0     1   214    14   227    14   228 0.99 LrgB-like family
DUF3816              PF12822.2    172 sp|Q5HL71|CIDB_STAEQ -            229    0.0017   18.2   5.0   2   3   3.4e-07    0.0017   18.2   5.0    61   133    58   119    53   142 0.76 Protein of unknown function (DUF3816)
AAA_2                PF07724.9    171 sp|Q5HQI5|CLPB_STAEQ -            869   1.1e-57  194.7   0.3   2   2   9.7e-58   3.3e-55  186.5   0.0     1   171   600   766   600   766 0.99 AAA domain (Cdc48 subfamily)
AAA                  PF00004.24   132 sp|Q5HQI5|CLPB_STAEQ -            869     2e-29  102.4   1.9   1   2   4.8e-18   1.6e-15   57.4   0.0     2   125   202   333   201   338 0.79 ATPase family associated with various cellular activities (AAA)
AAA                  PF00004.24   132 sp|Q5HQI5|CLPB_STAEQ -            869     2e-29  102.4   1.9   2   2   5.5e-13   1.9e-10   41.0   0.0     2   111   606   724   605   737 0.85 ATPase family associated with various cellular activities (AAA)
ClpB_D2-small        PF10431.4     81 sp|Q5HQI5|CLPB_STAEQ -            869     1e-23   82.9   0.8   1   1   9.7e-26   3.3e-23   81.3   0.1     1    81   772   852   772   852 0.97 C-terminal, D2-small domain, of ClpB protein
AAA_5                PF07728.9    139 sp|Q5HQI5|CLPB_STAEQ -            869   9.5e-22   77.2   0.1   1   2   6.7e-07   0.00023   20.8   0.0     3    76   202   281   200   287 0.82 AAA domain (dynein-related subfamily)
AAA_5                PF07728.9    139 sp|Q5HQI5|CLPB_STAEQ -            869   9.5e-22   77.2   0.1   2   2   8.2e-17   2.8e-14   53.0   0.0     2   125   605   726   604   736 0.84 AAA domain (dynein-related subfamily)
Clp_N                PF02861.15    53 sp|Q5HQI5|CLPB_STAEQ -            869   8.4e-16   57.6   0.2   1   2   2.6e-10   8.9e-08   31.9   0.2     1    50    17    66    17    69 0.91 Clp amino terminal domain
Clp_N                PF02861.15    53 sp|Q5HQI5|CLPB_STAEQ -            869   8.4e-16   57.6   0.2   2   2   5.3e-07   0.00018   21.3   0.0     1    30    96   124    96   144 0.81 Clp amino terminal domain
AAA_16               PF13191.1    185 sp|Q5HQI5|CLPB_STAEQ -            869   2.2e-15   57.1   3.1   1   3   2.1e-07   7.1e-05   22.8   0.0     2    51   179   225   178   235 0.90 AAA ATPase domain
AAA_16               PF13191.1    185 sp|Q5HQI5|CLPB_STAEQ -            869   2.2e-15   57.1   3.1   2   3    0.0011      0.38   10.7   0.0   120   160   240   280   227   295 0.86 AAA ATPase domain
AAA_16               PF13191.1    185 sp|Q5HQI5|CLPB_STAEQ -            869   2.2e-15   57.1   3.1   3   3   3.4e-06    0.0012   18.8   0.0     2    63   574   641   573   700 0.77 AAA ATPase domain
AAA_22               PF13401.1    131 sp|Q5HQI5|CLPB_STAEQ -            869   1.1e-11   45.0   0.2   1   2     2e-06    0.0007   19.7   0.0     6   101   200   287   195   320 0.82 AAA domain
AAA_22               PF13401.1    131 sp|Q5HQI5|CLPB_STAEQ -            869   1.1e-11   45.0   0.2   2   2   7.7e-07   0.00027   21.0   0.0     5   115   603   701   600   724 0.80 AAA domain
Sigma54_activat      PF00158.21   168 sp|Q5HQI5|CLPB_STAEQ -            869   4.2e-11   42.6   0.0   1   2    0.0018      0.61    9.5   0.0     2   105   180   282   179   313 0.72 Sigma-54 interaction domain
Sigma54_activat      PF00158.21   168 sp|Q5HQI5|CLPB_STAEQ -            869   4.2e-11   42.6   0.0   2   2   6.8e-10   2.3e-07   30.4   0.0    24   135   604   713   582   735 0.80 Sigma-54 interaction domain
AAA_14               PF13173.1    128 sp|Q5HQI5|CLPB_STAEQ -            869   4.9e-10   39.4   0.0   1   2     2e-05    0.0071   16.2   0.0     6    75   202   284   197   338 0.70 AAA domain
AAA_14               PF13173.1    128 sp|Q5HQI5|CLPB_STAEQ -            869   4.9e-10   39.4   0.0   2   2   2.6e-06   0.00091   19.1   0.0     7    87   607   701   603   723 0.71 AAA domain
AAA_18               PF13238.1    129 sp|Q5HQI5|CLPB_STAEQ -            869   5.5e-08   33.1   6.4   1   2   2.8e-06   0.00097   19.4   0.0     3    68   203   270   202   283 0.80 AAA domain
AAA_18               PF13238.1    129 sp|Q5HQI5|CLPB_STAEQ -            869   5.5e-08   33.1   6.4   2   2   9.9e-05     0.034   14.4   0.1     3    32   607   639   606   805 0.87 AAA domain
IstB_IS21            PF01695.12   178 sp|Q5HQI5|CLPB_STAEQ -            869   7.5e-08   31.9   0.0   1   2   3.5e-05     0.012   15.0   0.0    46   106   197   261   183   280 0.76 IstB-like ATP binding protein
IstB_IS21            PF01695.12   178 sp|Q5HQI5|CLPB_STAEQ -            869   7.5e-08   31.9   0.0   2   2   7.4e-05     0.026   13.9   0.0    50    79   605   634   602   652 0.80 IstB-like ATP binding protein
AAA_17               PF13207.1    121 sp|Q5HQI5|CLPB_STAEQ -            869   2.9e-06   28.0   4.7   1   2    0.0028      0.95   10.2   1.2     4    66   203   267   202   492 0.78 AAA domain
AAA_17               PF13207.1    121 sp|Q5HQI5|CLPB_STAEQ -            869   2.9e-06   28.0   4.7   2   2   3.7e-05     0.013   16.3   0.0     6    35   609   649   605   766 0.76 AAA domain
DUF815               PF05673.8    250 sp|Q5HQI5|CLPB_STAEQ -            869   3.5e-06   26.1   1.2   1   3   1.4e-05    0.0048   15.8   0.1    32   116   181   279   153   285 0.76 Protein of unknown function (DUF815)
Arch_ATPase          PF01637.13   234 sp|Q5HQI5|CLPB_STAEQ -            869   8.9e-06   25.5  17.4   2   3   5.6e-06    0.0019   17.9   0.5     3   202   181   351   179   362 0.66 Archaeal ATPase
RuvB_N               PF05496.7    234 sp|Q5HQI5|CLPB_STAEQ -            869   1.1e-05   24.6   0.1   3   3    0.0011      0.39    9.7   0.0    24    74   572   626   553   644 0.73 Holliday junction DNA helicase ruvB N-terminus
Mg_chelatase         PF01078.16   207 sp|Q5HQI5|CLPB_STAEQ -            869   2.7e-05   23.4   0.1   2   2   0.00033      0.11   11.6   0.1    24   157   604   723   601   775 0.67 Magnesium chelatase, subunit ChlI
RNA_helicase         PF00910.17   107 sp|Q5HQI5|CLPB_STAEQ -            869   3.5e-05   23.9   0.1   2   2   0.00059       0.2   11.8   0.0     2    25   606   629   605   648 0.82 RNA helicase
NACHT                PF05729.7    166 sp|Q5HQI5|CLPB_STAEQ -            869   3.9e-05   23.3   0.0   1   2   0.00032      0.11   12.1   0.0     4    43   202   242   200   304 0.83 NACHT domain
AAA_19               PF13245.1     76 sp|Q5HQI5|CLPB_STAEQ -            869   0.00012   21.7   0.0   1   2   0.00021     0.071   12.8   0.0     9    45   199   231   191   232 0.72 Part of AAA domain
DNA_pol3_delta2      PF13177.1    162 sp|Q5HQI5|CLPB_STAEQ -            869   0.00013   21.6   0.0   1   1   6.4e-06    0.0022   17.6   0.0    20   128   603   700   589   704 0.81 DNA polymerase III, delta subunit
AAA_3                PF07726.6    131 sp|Q5HQI5|CLPB_STAEQ -            869   0.00026   20.6   0.1   2   2    0.0005      0.17   11.4   0.0     5   110   608   722   604   728 0.66 ATPase family associated with various cellular activities (AAA)
DUF258               PF03193.11   161 sp|Q5HQI5|CLPB_STAEQ -            869   0.00047   19.3   0.0   1   2    0.0021      0.72    9.0   0.0    21    59   184   222   165   271 0.73 Protein of unknown function, DUF258
AAA_24               PF13479.1    213 sp|Q5HQI5|CLPB_STAEQ -            869    0.0006   19.4   0.0   2   2   0.00025     0.085   12.4   0.0     6    86   605   692   603   710 0.69 AAA domain
MobB                 PF03205.9    140 sp|Q5HQI5|CLPB_STAEQ -            869    0.0018   17.9   0.0   2   2    0.0027      0.93    9.1   0.0     4    32   606   634   604   640 0.86 Molybdopterin guanine dinucleotide synthesis protein B
AAA_10               PF12846.2    304 sp|Q5HQI5|CLPB_STAEQ -            869    0.0024   17.3   3.7   3   3   0.00053      0.18   11.1   0.0     3    44   604   647   603   809 0.61 AAA-like domain
AAA_33               PF13671.1    143 sp|Q5HQI5|CLPB_STAEQ -            869    0.0045   16.8   0.0   2   2    0.0028      0.96    9.3   0.0     3    34   606   642   605   703 0.80 AAA domain
T2SE                 PF00437.15   272 sp|Q5HQI5|CLPB_STAEQ -            869     0.011   14.7   1.1   1   1   0.00031      0.11   11.4   0.0   127   206   601   682   552   690 0.75 Type II/IV secretion system protein
DUF87                PF01935.12   229 sp|Q5HQI5|CLPB_STAEQ -            869     0.024   14.4  13.2   3   3   0.00091      0.31   10.8   0.0    26    60   605   638   603   662 0.88 Domain of unknown function DUF87
AAA_23               PF13476.1    202 sp|Q5HQI5|CLPB_STAEQ -            869     0.034   14.4   0.0   1   1   9.9e-05     0.034   14.4   0.0    20   122   603   728   595   807 0.70 AAA domain
ABC_tran             PF00005.22   137 sp|Q5HQI5|CLPB_STAEQ -            869     0.055   13.7   7.0   2   2    0.0023      0.78   10.0   0.0    16    67   607   661   603   747 0.70 ABC transporter
V_ATPase_I           PF01496.14   759 sp|Q5HQI5|CLPB_STAEQ -            869      0.16    9.8  10.8   1   1    0.0008      0.28    9.0  10.8    27   153   405   538   391   572 0.81 V-type ATPase 116kDa subunit family
Atg14                PF10186.4    302 sp|Q5HQI5|CLPB_STAEQ -            869      0.43    9.4  10.7   1   1    0.0023      0.79    8.6  10.7    54   133   415   490   389   535 0.54 UV radiation resistance protein and autophagy-related subunit 14
DUF1409              PF07197.7     51 sp|Q5HQI5|CLPB_STAEQ -            869      0.55   10.3   6.5   1   1    0.0028      0.98    9.5   4.7    19    49   438   468   434   470 0.93 Protein of unknown function (DUF1409)
AAA_2                PF07724.9    171 sp|Q5HRM8|CLPC_STAEQ -            817   1.4e-59  200.8   0.2   2   2   2.5e-58   7.3e-56  188.7   0.0     1   171   536   708   536   708 0.98 AAA domain (Cdc48 subfamily)
Clp_N                PF02861.15    53 sp|Q5HRM8|CLPC_STAEQ -            817   3.1e-34  116.6   3.0   1   2   2.5e-19   7.4e-17   61.0   0.2     1    53    17    69    17    69 0.99 Clp amino terminal domain
Clp_N                PF02861.15    53 sp|Q5HRM8|CLPC_STAEQ -            817   3.1e-34  116.6   3.0   2   2   1.9e-17   5.6e-15   54.9   0.3     3    53    93   143    91   143 0.97 Clp amino terminal domain
AAA                  PF00004.24   132 sp|Q5HRM8|CLPC_STAEQ -            817   1.1e-27   96.8   0.1   1   2   1.5e-16   4.6e-14   52.7   0.0     2   124   205   334   204   339 0.81 ATPase family associated with various cellular activities (AAA)
AAA                  PF00004.24   132 sp|Q5HRM8|CLPC_STAEQ -            817   1.1e-27   96.8   0.1   2   2   1.1e-12   3.2e-10   40.2   0.0     2   111   542   660   541   670 0.84 ATPase family associated with various cellular activities (AAA)
ClpB_D2-small        PF10431.4     81 sp|Q5HRM8|CLPC_STAEQ -            817   1.1e-26   92.5   2.1   1   1   7.6e-29   2.3e-26   91.5   0.6     1    81   714   794   714   794 0.97 C-terminal, D2-small domain, of ClpB protein
AAA_5                PF07728.9    139 sp|Q5HRM8|CLPC_STAEQ -            817   1.5e-19   70.1   0.1   1   2   8.3e-06    0.0025   17.5   0.0     3    33   205   236   203   287 0.60 AAA domain (dynein-related subfamily)
AAA_5                PF07728.9    139 sp|Q5HRM8|CLPC_STAEQ -            817   1.5e-19   70.1   0.1   2   2   1.5e-15   4.5e-13   49.1   0.0     2   128   541   665   540   671 0.86 AAA domain (dynein-related subfamily)
AAA_16               PF13191.1    185 sp|Q5HRM8|CLPC_STAEQ -            817   3.5e-14   53.1   0.6   1   3   6.2e-08   1.8e-05   24.7   0.0     2    51   182   228   181   239 0.91 AAA ATPase domain
AAA_16               PF13191.1    185 sp|Q5HRM8|CLPC_STAEQ -            817   3.5e-14   53.1   0.6   3   3   2.6e-05    0.0076   16.2   0.0    10    63   525   577   509   589 0.77 AAA ATPase domain
Sigma54_activat      PF00158.21   168 sp|Q5HRM8|CLPC_STAEQ -            817   1.9e-12   46.9   0.1   1   2   0.00015     0.045   13.2   0.1     2   105   183   284   182   291 0.78 Sigma-54 interaction domain
Sigma54_activat      PF00158.21   168 sp|Q5HRM8|CLPC_STAEQ -            817   1.9e-12   46.9   0.1   2   2   6.8e-10     2e-07   30.6   0.0    23   154   539   670   510   672 0.76 Sigma-54 interaction domain
AAA_22               PF13401.1    131 sp|Q5HRM8|CLPC_STAEQ -            817   9.6e-11   41.9   1.5   1   2   8.6e-06    0.0025   17.9   0.2     6    99   203   284   198   366 0.87 AAA domain
AAA_22               PF13401.1    131 sp|Q5HRM8|CLPC_STAEQ -            817   9.6e-11   41.9   1.5   2   2   5.6e-06    0.0017   18.5   0.0     5   113   539   635   535   658 0.79 AAA domain
IstB_IS21            PF01695.12   178 sp|Q5HRM8|CLPC_STAEQ -            817   5.4e-09   35.7   0.0   1   2   6.1e-06    0.0018   17.7   0.0    45    75   199   229   184   282 0.81 IstB-like ATP binding protein
IstB_IS21            PF01695.12   178 sp|Q5HRM8|CLPC_STAEQ -            817   5.4e-09   35.7   0.0   2   2   3.6e-05     0.011   15.2   0.0    50    74   541   565   538   586 0.80 IstB-like ATP binding protein
AAA_14               PF13173.1    128 sp|Q5HRM8|CLPC_STAEQ -            817   1.1e-07   31.8   0.3   1   2   0.00054      0.16   11.8   0.0     6    74   205   288   200   342 0.67 AAA domain
AAA_14               PF13173.1    128 sp|Q5HRM8|CLPC_STAEQ -            817   1.1e-07   31.8   0.3   2   2   6.7e-05      0.02   14.8   0.0     6    87   542   637   539   662 0.70 AAA domain
AAA_17               PF13207.1    121 sp|Q5HRM8|CLPC_STAEQ -            817   1.8e-07   31.9   3.7   1   2    0.0023      0.69   10.7   0.5     4    35   206   252   205   451 0.74 AAA domain
AAA_17               PF13207.1    121 sp|Q5HRM8|CLPC_STAEQ -            817   1.8e-07   31.9   3.7   2   2   8.1e-06    0.0024   18.6   0.0     5    40   544   584   541   720 0.71 AAA domain
Zeta_toxin           PF06414.7    201 sp|Q5HRM8|CLPC_STAEQ -            817   2.2e-07   30.1   2.5   3   3   1.9e-06   0.00055   19.0   0.0    19    58   541   591   522   635 0.74 Zeta toxin
AAA_18               PF13238.1    129 sp|Q5HRM8|CLPC_STAEQ -            817   5.1e-07   30.0   6.8   1   2   8.5e-05     0.025   14.8   0.1     3    68   206   273   205   287 0.73 AAA domain
AAA_18               PF13238.1    129 sp|Q5HRM8|CLPC_STAEQ -            817   5.1e-07   30.0   6.8   2   2   7.2e-05     0.021   15.1   0.0     3    23   543   571   542   643 0.79 AAA domain
AAA_23               PF13476.1    202 sp|Q5HRM8|CLPC_STAEQ -            817   4.5e-06   27.1  10.3   1   2    0.0021      0.64   10.3   9.3    23   201   205   460   193   461 0.49 AAA domain
AAA_23               PF13476.1    202 sp|Q5HRM8|CLPC_STAEQ -            817   4.5e-06   27.1  10.3   2   2   0.00019     0.055   13.7   0.0    20   119   539   661   533   781 0.48 AAA domain
Arch_ATPase          PF01637.13   234 sp|Q5HRM8|CLPC_STAEQ -            817     1e-05   25.3   8.5   1   2   6.2e-05     0.018   14.7   0.2     2   131   183   285   182   379 0.61 Archaeal ATPase
RNA_helicase         PF00910.17   107 sp|Q5HRM8|CLPC_STAEQ -            817   2.1e-05   24.6   0.1   1   2    0.0013      0.37   10.9   0.0     3    30   206   235   205   256 0.77 RNA helicase
UVR                  PF02151.14    36 sp|Q5HRM8|CLPC_STAEQ -            817   2.1e-05   23.8   5.5   1   1     7e-08   2.1e-05   23.8   5.5     1    36   417   452   417   452 0.96 UvrB/uvrC motif
Mg_chelatase         PF01078.16   207 sp|Q5HRM8|CLPC_STAEQ -            817   3.4e-05   23.1   3.1   1   2   0.00017     0.051   12.7   0.0    20    65   199   244   179   264 0.78 Magnesium chelatase, subunit ChlI
NACHT                PF05729.7    166 sp|Q5HRM8|CLPC_STAEQ -            817   4.3e-05   23.2   0.0   1   2    0.0002      0.06   13.0   0.0     4    32   205   233   203   311 0.85 NACHT domain
DNA_pol3_delta2      PF13177.1    162 sp|Q5HRM8|CLPC_STAEQ -            817   4.6e-05   23.1   0.0   2   2   5.5e-05     0.016   14.8   0.0    21   127   540   635   530   638 0.80 DNA polymerase III, delta subunit
RuvB_N               PF05496.7    234 sp|Q5HRM8|CLPC_STAEQ -            817   5.8e-05   22.2   3.9   2   2   0.00017      0.05   12.6   0.0    16    74   500   562   488   582 0.77 Holliday junction DNA helicase ruvB N-terminus
MMR_HSR1             PF01926.18   116 sp|Q5HRM8|CLPC_STAEQ -            817   5.9e-05   23.0   0.1   1   2    0.0002     0.061   13.2   0.0     3    88   205   279   203   321 0.82 50S ribosome-binding GTPase
KTI12                PF08433.5    270 sp|Q5HRM8|CLPC_STAEQ -            817   0.00011   21.5   2.3   1   3    0.0021      0.63    9.2   0.0     5    41   205   248   205   276 0.70 Chromatin associated protein KTI12
AAA_3                PF07726.6    131 sp|Q5HRM8|CLPC_STAEQ -            817   0.00013   21.5   0.1   2   2   0.00038      0.11   12.0   0.0     7   111   546   659   541   666 0.66 ATPase family associated with various cellular activities (AAA)
AAA_28               PF13521.1    163 sp|Q5HRM8|CLPC_STAEQ -            817    0.0003   20.8   0.0   2   2    0.0026      0.76    9.7   0.0     2    22   541   561   540   582 0.87 AAA domain
AAA_25               PF13481.1    194 sp|Q5HRM8|CLPC_STAEQ -            817   0.00033   20.0   0.4   1   2    0.0016      0.48    9.7   0.0    37    97   205   268   186   285 0.68 AAA domain
Torsin               PF06309.6    127 sp|Q5HRM8|CLPC_STAEQ -            817    0.0004   20.2   0.0   2   2   0.00019     0.055   13.3   0.0    14    79   497   564   489   581 0.84 Torsin
AAA_19               PF13245.1     76 sp|Q5HRM8|CLPC_STAEQ -            817    0.0011   18.6   0.1   1   2    0.0005      0.15   11.8   0.1     9    37   202   227   192   251 0.78 Part of AAA domain
OmpH                 PF03938.9    158 sp|Q5HRM8|CLPC_STAEQ -            817    0.0018   18.2   0.3   1   1     4e-05     0.012   15.5   0.0    16   123   236   481   215   485 0.89 Outer membrane protein (OmpH-like)
Sigma54_activ_2      PF14532.1    138 sp|Q5HRM8|CLPC_STAEQ -            817    0.0026   17.8   0.0   1   2    0.0032      0.94    9.5   0.0     8    63   187   243   185   284 0.78 Sigma-54 interaction domain
NB-ARC               PF00931.17   287 sp|Q5HRM8|CLPC_STAEQ -            817    0.0074   15.1   0.0   1   2    0.0023      0.68    8.7   0.0     1    37   185   219   185   233 0.83 NB-ARC domain
TrwB_AAD_bind        PF10412.4    386 sp|Q5HRM8|CLPC_STAEQ -            817     0.011   14.4   0.0   2   2    0.0025      0.74    8.3   0.0    17    58   540   580   532   585 0.86 Type IV secretion-system coupling protein DNA-binding domain
Miro                 PF08477.8    119 sp|Q5HRM8|CLPC_STAEQ -            817      0.03   14.8   3.7   1   1    0.0026      0.76   10.2   0.0     3    75   205   272   204   282 0.67 Miro-like protein
DnaB_C               PF03796.10   259 sp|Q5HRM8|CLPC_STAEQ -            817     0.049   12.4   0.0   1   1    0.0011      0.34    9.7   0.0    23    59   205   245   192   248 0.84 DnaB-like helicase C terminal domain
Ta0938               PF11494.3    106 sp|Q5HRM8|CLPC_STAEQ -            817      0.11   12.5   0.1   1   1    0.0012      0.34   11.0   0.1    53    90   767   804   763   814 0.89 Ta0938
DUF1002              PF06207.6    225 sp|Q5HRM8|CLPC_STAEQ -            817      0.13   11.5  10.5   1   2   0.00056      0.17   11.2   5.0   130   223   363   462   358   464 0.89 Protein of unknown function (DUF1002)
CLP_protease         PF00574.18   182 sp|Q5HQW0|CLPP_STAEQ -            194   1.1e-88  295.6   0.3   1   1   2.6e-92   1.3e-88  295.4   0.3     2   181    13   192    12   193 0.99 Clp protease
Peptidase_S49        PF01343.13   154 sp|Q5HQW0|CLPP_STAEQ -            194     0.045   13.5   0.1   2   2   2.5e-05      0.12   12.1   0.1    96   138   147   190   132   194 0.84 Peptidase family S49
DmpG_comm            PF07836.6     66 sp|Q5HQW0|CLPP_STAEQ -            194      0.11   11.8   0.0   1   1   4.3e-05      0.21   10.9   0.0     3    41    84   122    82   145 0.92 DmpG-like communication domain
AAA_2                PF07724.9    171 sp|Q5HNM9|CLPX_STAEQ -            420   1.8e-48  164.6   0.8   1   1   6.6e-51     3e-48  163.9   0.1     2   171   109   305   108   305 0.97 AAA domain (Cdc48 subfamily)
zf-C4_ClpX           PF06689.8     41 sp|Q5HNM9|CLPX_STAEQ -            420   3.4e-20   71.2   6.3   1   1   1.4e-22   6.2e-20   70.4   6.3     2    41    11    49    10    49 0.97 ClpX C4-type zinc finger
ClpB_D2-small        PF10431.4     81 sp|Q5HNM9|CLPX_STAEQ -            420   3.9e-17   61.9   0.5   1   1   2.9e-19   1.3e-16   60.2   0.4     1    75   311   389   311   397 0.93 C-terminal, D2-small domain, of ClpB protein
AAA                  PF00004.24   132 sp|Q5HNM9|CLPX_STAEQ -            420   1.5e-16   60.7   0.2   1   1   1.2e-18   5.2e-16   59.0   0.1     2   111   114   241   113   283 0.80 ATPase family associated with various cellular activities (AAA)
AAA_5                PF07728.9    139 sp|Q5HNM9|CLPX_STAEQ -            420   1.6e-06   27.9   0.1   1   1   4.9e-08   2.2e-05   24.1   0.1     2    80   113   190   112   284 0.85 AAA domain (dynein-related subfamily)
AAA_22               PF13401.1    131 sp|Q5HNM9|CLPX_STAEQ -            420   1.8e-06   28.1   0.8   1   2   2.1e-07   9.4e-05   22.5   0.3     3    99   109   187   105   217 0.74 AAA domain
RuvB_N               PF05496.7    234 sp|Q5HNM9|CLPX_STAEQ -            420   3.5e-06   26.2   0.1   1   1   4.5e-08     2e-05   23.7   0.1    22   119    70   193    49   197 0.75 Holliday junction DNA helicase ruvB N-terminus
AAA_17               PF13207.1    121 sp|Q5HNM9|CLPX_STAEQ -            420   5.1e-06   27.3   0.2   1   1   3.3e-08   1.5e-05   25.7   0.1     2    76   113   185   112   260 0.70 AAA domain
Mg_chelatase         PF01078.16   207 sp|Q5HNM9|CLPX_STAEQ -            420   6.6e-05   22.1   0.1   2   3   3.5e-05     0.016   14.4   0.0    24    46   112   134   108   157 0.86 Magnesium chelatase, subunit ChlI
IstB_IS21            PF01695.12   178 sp|Q5HNM9|CLPX_STAEQ -            420   0.00045   19.6   0.0   1   1   1.9e-06   0.00084   18.7   0.0    46    69   109   132    89   135 0.82 IstB-like ATP binding protein
AAA_18               PF13238.1    129 sp|Q5HNM9|CLPX_STAEQ -            420   0.00096   19.4   0.2   1   1   9.4e-06    0.0042   17.3   0.2     1    27   113   157   113   203 0.64 AAA domain
Sigma54_activat      PF00158.21   168 sp|Q5HNM9|CLPX_STAEQ -            420    0.0012   18.3   0.0   1   2   0.00047      0.21   11.0   0.0     7    44    95   132    89   149 0.80 Sigma-54 interaction domain
AAA_16               PF13191.1    185 sp|Q5HNM9|CLPX_STAEQ -            420    0.0012   18.9   0.1   1   1   1.4e-05    0.0064   16.4   0.0    23    49   109   135    87   151 0.86 AAA ATPase domain
AAA_14               PF13173.1    128 sp|Q5HNM9|CLPX_STAEQ -            420    0.0017   18.2   0.0   1   1     1e-05    0.0046   16.8   0.0     3    74   111   188   109   218 0.66 AAA domain
Sigma54_activ_2      PF14532.1    138 sp|Q5HNM9|CLPX_STAEQ -            420    0.0021   18.1   0.0   1   1   1.5e-05    0.0068   16.4   0.0    20    83   109   189    95   198 0.72 Sigma-54 interaction domain
NACHT                PF05729.7    166 sp|Q5HNM9|CLPX_STAEQ -            420    0.0059   16.2   0.4   1   1   6.1e-05     0.027   14.1   0.0     3    25   113   135   111   145 0.90 NACHT domain
T2SE                 PF00437.15   272 sp|Q5HNM9|CLPX_STAEQ -            420    0.0065   15.4   0.0   1   1   2.8e-05     0.012   14.4   0.0   128   153   110   135    68   144 0.87 Type II/IV secretion system protein
MCM                  PF00493.18   331 sp|Q5HNM9|CLPX_STAEQ -            420    0.0066   15.2   0.2   1   1   4.5e-05      0.02   13.6   0.2    16   138    65   192    56   198 0.75 MCM2/3/5 family
ABC_tran             PF00005.22   137 sp|Q5HNM9|CLPX_STAEQ -            420     0.008   16.4   0.0   1   1   4.4e-05      0.02   15.2   0.0    11    36   110   135   105   213 0.88 ABC transporter
AAA_33               PF13671.1    143 sp|Q5HNM9|CLPX_STAEQ -            420    0.0083   16.0   0.0   1   1   3.4e-05     0.015   15.1   0.0     3    31   114   142   113   215 0.81 AAA domain
AAA_24               PF13479.1    213 sp|Q5HNM9|CLPX_STAEQ -            420     0.011   15.2   0.1   1   1   4.8e-05     0.022   14.3   0.1     3    29   110   136   108   196 0.73 AAA domain
AAA_28               PF13521.1    163 sp|Q5HNM9|CLPX_STAEQ -            420     0.016   15.1   0.0   1   1   7.4e-05     0.033   14.1   0.0     1    27   112   139   112   160 0.83 AAA domain
PhoH                 PF02562.11   205 sp|Q5HNM9|CLPX_STAEQ -            420     0.019   14.1   0.0   1   1   0.00013     0.059   12.5   0.0    18    40   109   131   102   137 0.84 PhoH-like protein
DEAD                 PF00270.24   169 sp|Q5HNM9|CLPX_STAEQ -            420     0.049   13.1   0.0   1   1   0.00028      0.13   11.7   0.0    12    33   108   129   101   363 0.68 DEAD/DEAH box helicase
RNA_helicase         PF00910.17   107 sp|Q5HNM9|CLPX_STAEQ -            420     0.053   13.6   0.0   1   1   0.00029      0.13   12.4   0.0     2    24   114   136   113   176 0.87 RNA helicase
AAA_25               PF13481.1    194 sp|Q5HNM9|CLPX_STAEQ -            420     0.055   12.8   0.0   1   1   0.00025      0.11   11.8   0.0    34   130   111   200    94   210 0.68 AAA domain
ResIII               PF04851.10   184 sp|Q5HNM9|CLPX_STAEQ -            420     0.057   13.2   1.2   1   1   0.00025      0.11   12.2   0.1    22    49    99   134    73   215 0.78 Type III restriction enzyme, res subunit
SKI                  PF01202.17   158 sp|Q5HNM9|CLPX_STAEQ -            420     0.059   13.2   0.0   1   1   0.00036      0.16   11.8   0.0     2    24   120   142   119   160 0.88 Shikimate kinase
CRAL_TRIO_N          PF03765.10    55 sp|Q5HNM9|CLPX_STAEQ -            420     0.067   13.3   0.1   1   1   0.00064      0.29   11.3   0.1    30    50   154   176    65   179 0.74 CRAL/TRIO, N-terminal domain
UPF0079              PF02367.12   123 sp|Q5HNM9|CLPX_STAEQ -            420      0.07   12.7   0.0   1   1   0.00043      0.19   11.3   0.0    18    43   113   138   103   147 0.84 Uncharacterised P-loop hydrolase UPF0079
PduV-EutP            PF10662.4    143 sp|Q5HNM9|CLPX_STAEQ -            420     0.075   12.5   0.0   1   1   0.00041      0.18   11.2   0.0     3    23   112   132   110   148 0.88 Ethanolamine utilisation - propanediol utilisation
Pox_A32              PF04665.7    241 sp|Q5HNM9|CLPX_STAEQ -            420     0.095   11.9   0.0   1   1   0.00051      0.23   10.7   0.0    12    41   109   138   102   151 0.86 Poxvirus A32 protein
AAA_29               PF13555.1     62 sp|Q5HNM9|CLPX_STAEQ -            420      0.11   12.0   0.0   1   1   0.00054      0.24   10.9   0.0    17    38   106   125   100   137 0.78 P-loop containing region of AAA domain
PLDc_2               PF13091.1    126 sp|Q5HPM5|CLS1_STAEQ -            490   4.4e-36  123.4   0.0   1   2   4.9e-13   1.2e-09   37.9   0.0     2   100   143   259   142   284 0.80 PLD-like domain
PLDc_2               PF13091.1    126 sp|Q5HPM5|CLS1_STAEQ -            490   4.4e-36  123.4   0.0   2   2   3.9e-27   9.7e-24   83.5   0.0     3   124   332   456   330   458 0.93 PLD-like domain
PLDc                 PF00614.17    28 sp|Q5HPM5|CLS1_STAEQ -            490   2.8e-15   55.5   3.4   1   2   1.1e-09   2.8e-06   26.9   1.1     2    28   226   252   225   252 0.92 Phospholipase D Active site motif
PLDc                 PF00614.17    28 sp|Q5HPM5|CLS1_STAEQ -            490   2.8e-15   55.5   3.4   2   2   3.4e-10   8.3e-07   28.6   0.0     3    28   405   430   403   430 0.91 Phospholipase D Active site motif
PLDc_N               PF13396.1     46 sp|Q5HPM5|CLS1_STAEQ -            490   1.4e-11   43.8   6.9   1   1   1.1e-14   2.7e-11   42.9   6.9     2    45    18    64    17    65 0.87 Phospholipase_D-nuclease N-terminal
PP_kinase_C          PF13090.1    353 sp|Q5HPM5|CLS1_STAEQ -            490     0.013   14.1   0.0   1   1   8.6e-05      0.21   10.1   0.0   212   317   351   460   335   477 0.66 Polyphosphate kinase C-terminal domain
DUF1469              PF07332.6    121 sp|Q5HPM5|CLS1_STAEQ -            490     0.028   14.1   2.1   1   1   1.9e-05     0.048   13.3   2.1    38   100     6    69     3    75 0.83 Protein of unknown function (DUF1469)
ATG27                PF09451.5    269 sp|Q5HPM5|CLS1_STAEQ -            490      0.13   11.4   0.0   1   1    0.0001      0.25   10.5   0.0   197   235    38    76    32    96 0.77 Autophagy-related protein 27
PLDc_2               PF13091.1    126 sp|Q5HMD3|CLS2_STAEQ -            488   4.3e-37  126.6   0.9   2   3   1.2e-13   2.2e-10   40.3   0.1     1   126   140   283   140   283 0.77 PLD-like domain
PLDc_2               PF13091.1    126 sp|Q5HMD3|CLS2_STAEQ -            488   4.3e-37  126.6   0.9   3   3   5.1e-27   9.4e-24   83.5   0.0     2   123   329   454   328   457 0.92 PLD-like domain
PLDc                 PF00614.17    28 sp|Q5HMD3|CLS2_STAEQ -            488   2.2e-18   65.4   4.5   1   2   5.1e-11   9.5e-08   31.6   1.0     2    28   224   250   223   250 0.93 Phospholipase D Active site motif
PLDc                 PF00614.17    28 sp|Q5HMD3|CLS2_STAEQ -            488   2.2e-18   65.4   4.5   2   2   7.8e-12   1.4e-08   34.2   0.1     2    28   402   428   401   428 0.95 Phospholipase D Active site motif
PLDc_N               PF13396.1     46 sp|Q5HMD3|CLS2_STAEQ -            488   1.3e-10   40.7   9.1   1   1   1.1e-13   2.1e-10   40.0   9.1     2    45    18    62    17    63 0.91 Phospholipase_D-nuclease N-terminal
DUF4131              PF13567.1    176 sp|Q5HMD3|CLS2_STAEQ -            488     0.021   14.2   0.2   1   1   3.8e-05      0.07   12.5   0.5    19    94    17    94     4   114 0.61 Domain of unknown function (DUF4131)
UPF0104              PF03706.8    294 sp|Q5HMD3|CLS2_STAEQ -            488     0.026   13.7   3.2   1   1     2e-05     0.038   13.2   3.2   107   186    10    92     3   121 0.68 Uncharacterised protein family (UPF0104)
DUF1469              PF07332.6    121 sp|Q5HMD3|CLS2_STAEQ -            488     0.034   13.8   2.0   1   1   3.1e-05     0.057   13.1   2.0    44    99    12    66     4    75 0.82 Protein of unknown function (DUF1469)
Pox_A32              PF04665.7    241 sp|Q5HMD3|CLS2_STAEQ -            488     0.041   13.1   5.2   2   2   1.5e-05     0.028   13.7   1.0    67   127   147   208   120   212 0.78 Poxvirus A32 protein
Phtf-FEM1B_bdg       PF12129.3    159 sp|Q5HMD3|CLS2_STAEQ -            488       0.3   10.4   2.8   1   1   0.00029      0.54    9.6   2.8    69   127    11    73     2    82 0.81 Male germ-cell putative homeodomain transcription factor
Methyltransf_11      PF08241.7     95 sp|Q5HMV4|CMOA_STAEQ -            228   9.2e-12   45.3   0.0   2   2   3.8e-13   5.6e-10   39.5   0.0     2    95    53   148    52   148 0.96 Methyltransferase domain
Methyltransf_31      PF13847.1    152 sp|Q5HMV4|CMOA_STAEQ -            228   2.6e-10   40.1   2.5   2   2   3.4e-13     5e-10   39.1   2.0     3   126    47   171    45   217 0.78 Methyltransferase domain
Methyltransf_23      PF13489.1    161 sp|Q5HMV4|CMOA_STAEQ -            228     5e-07   29.5   0.0   1   1   4.5e-10   6.6e-07   29.1   0.0    20   160    45   213    19   214 0.71 Methyltransferase domain
Methyltransf_18      PF12847.2    112 sp|Q5HMV4|CMOA_STAEQ -            228   7.5e-07   29.7   0.0   1   1   7.9e-10   1.2e-06   29.0   0.0     2   110    48   149    47   151 0.84 Methyltransferase domain
Ubie_methyltran      PF01209.13   233 sp|Q5HMV4|CMOA_STAEQ -            228   2.4e-06   26.8   1.3   1   1     4e-09   5.9e-06   25.5   1.3    44   217    44   213    29   228 0.72 ubiE/COQ5 methyltransferase family
Methyltransf_12      PF08242.7     99 sp|Q5HMV4|CMOA_STAEQ -            228   3.2e-05   24.3   0.1   1   1   5.1e-08   7.5e-05   23.1   0.1     2    98    53   145    52   146 0.83 Methyltransferase domain
Rsm22                PF09243.5    275 sp|Q5HMV4|CMOA_STAEQ -            228   0.00065   18.8   0.1   1   1   6.2e-07   0.00093   18.3   0.1    37   141    50   151    44   169 0.87 Mitochondrial small ribosomal subunit Rsm22
Methyltransf_25      PF13649.1    101 sp|Q5HMV4|CMOA_STAEQ -            228    0.0014   18.9   0.0   1   1   1.6e-06    0.0024   18.1   0.0     1   101    51   144    51   144 0.84 Methyltransferase domain
GDC-P                PF02347.11   429 sp|Q5HMV4|CMOA_STAEQ -            228    0.0039   15.9   0.1   1   2   1.7e-05     0.026   13.2   0.1   129   230    48   148    33   152 0.86 Glycine cleavage system P-protein
FtsJ                 PF01728.14   181 sp|Q5HMV4|CMOA_STAEQ -            228       0.1   12.5   0.1   1   1   0.00012      0.17   11.8   0.1    19    74    43   111    29   171 0.73 FtsJ-like methyltransferase
CTP_transf_2         PF01467.21   157 sp|Q5HQ42|COAD_STAEQ -            161   4.2e-19   69.1   0.1   1   1     1e-22     5e-19   68.8   0.1     2   156     8   135     7   136 0.90 Cytidylyltransferase
Citrate_ly_lig       PF08218.6    182 sp|Q5HQ42|COAD_STAEQ -            161   1.3e-08   34.5   0.2   1   2   8.3e-12   4.1e-08   32.8   0.1     9    70    13    76     6   116 0.87 Citrate lyase ligase C-terminal domain
Pox_A11              PF05061.8    314 sp|Q5HQ42|COAD_STAEQ -            161    0.0046   16.0   0.0   1   1   1.1e-06    0.0054   15.8   0.0   128   184    32    88    15   127 0.84 Poxvirus A11 Protein
CoaE                 PF01121.15   180 sp|Q5HNL6|COAE_STAEQ -            203   7.3e-57  191.6   0.2   1   1     4e-60   8.5e-57  191.4   0.2     2   176     4   179     3   183 0.96 Dephospho-CoA kinase
AAA_18               PF13238.1    129 sp|Q5HNL6|COAE_STAEQ -            203   4.3e-07   30.3   1.2   1   1   3.1e-10   6.6e-07   29.6   0.5     1   117     5   151     5   173 0.75 AAA domain
AAA_17               PF13207.1    121 sp|Q5HNL6|COAE_STAEQ -            203   1.3e-06   29.1   2.6   1   1   4.8e-09     1e-05   26.3   2.6     1    67     4    97     4   197 0.54 AAA domain
AAA_33               PF13671.1    143 sp|Q5HNL6|COAE_STAEQ -            203   0.00041   20.2   0.0   1   1   5.9e-07    0.0012   18.6   0.0     6    89     9   126     4   162 0.79 AAA domain
AAA_28               PF13521.1    163 sp|Q5HNL6|COAE_STAEQ -            203   0.00047   20.1   0.4   1   2   5.1e-07    0.0011   18.9   0.1     2    46     5    50     4    75 0.73 AAA domain
CbiX                 PF01903.12   105 sp|Q5HNL6|COAE_STAEQ -            203     0.088   12.9   0.1   1   1   0.00017      0.37   10.9   0.1    18    91    58   135    42   147 0.76 CbiX
Fumble               PF03630.9    341 sp|Q5HM92|COAW_STAEQ -            265   4.1e-62  210.0   8.2   2   2     2e-63   2.9e-59  200.6   3.7    47   338    16   264    14   265 0.95 Fumble
CodY                 PF06018.9    177 sp|Q5HPT7|CODY_STAEQ -            256   2.1e-72  242.1   1.6   1   1   2.7e-75   2.7e-72  241.7   1.6     1   177     2   178     2   178 0.99 CodY GAF-like domain
HTH_CodY             PF08222.6     61 sp|Q5HPT7|CODY_STAEQ -            256   1.7e-34  116.9   1.0   1   1     3e-37   2.9e-34  116.1   1.0     1    59   197   255   197   256 0.98 CodY helix-turn-helix domain
MarR_2               PF12802.2     62 sp|Q5HPT7|CODY_STAEQ -            256    0.0002   20.9   0.4   1   1   5.9e-07   0.00058   19.4   0.1    12    54   192   233   186   237 0.85 MarR family
GntR                 PF00392.16    64 sp|Q5HPT7|CODY_STAEQ -            256   0.00079   18.8   0.3   1   1   2.9e-06    0.0028   17.0   0.2    29    64   205   242   196   242 0.86 Bacterial regulatory proteins, gntR family
HTH_41               PF14502.1     48 sp|Q5HPT7|CODY_STAEQ -            256    0.0011   18.4   0.1   1   1   3.6e-06    0.0036   16.8   0.1    13    48   207   242   203   242 0.94 Helix-turn-helix domain
Rrf2                 PF02082.15    83 sp|Q5HPT7|CODY_STAEQ -            256    0.0014   18.7   0.2   1   1   1.2e-05     0.011   15.7   0.1    26    59   201   234   184   245 0.87 Transcriptional regulator
HTH_11               PF08279.7     55 sp|Q5HPT7|CODY_STAEQ -            256    0.0017   17.9   0.4   1   1   6.2e-06    0.0061   16.1   0.1     5    49   190   233   187   236 0.79 HTH domain
HTH_20               PF12840.2     61 sp|Q5HPT7|CODY_STAEQ -            256    0.0025   17.5   0.0   1   1   4.9e-06    0.0048   16.6   0.0    25    57   201   233   189   236 0.85 Helix-turn-helix domain
TrmB                 PF01978.14    68 sp|Q5HPT7|CODY_STAEQ -            256    0.0034   17.0   0.0   1   1   8.7e-06    0.0086   15.7   0.0    24    55   202   233   191   244 0.91 Sugar-specific transcriptional regulator TrmB
MarR                 PF01047.17    59 sp|Q5HPT7|CODY_STAEQ -            256    0.0068   16.0   1.7   1   1   7.9e-06    0.0078   15.8   0.1    20    50   203   233   196   235 0.89 MarR family
HTH_24               PF13412.1     48 sp|Q5HPT7|CODY_STAEQ -            256    0.0068   15.7   0.1   1   1   1.8e-05     0.018   14.4   0.1    22    48   205   231   203   231 0.94 Winged helix-turn-helix DNA-binding
Ribosomal_S25        PF03297.10   105 sp|Q5HPT7|CODY_STAEQ -            256     0.011   15.7   0.4   2   2    0.0001       0.1   12.6   0.1    35    90   175   231   156   239 0.83 S25 ribosomal protein
HTH_Crp_2            PF13545.1     76 sp|Q5HPT7|CODY_STAEQ -            256     0.043   13.5   0.0   1   1   9.8e-05     0.097   12.4   0.0    34    61   206   233   200   253 0.83 Crp-like helix-turn-helix domain
GAF_2                PF13185.1    148 sp|Q5HPT7|CODY_STAEQ -            256     0.064   13.7   0.0   1   1   0.00012      0.11   12.9   0.0   102   140   110   147    91   153 0.82 GAF domain
E1-E2_ATPase         PF00122.15   230 sp|Q5HL56|COPA_STAEQ -            794   1.1e-59  201.2   2.5   2   3   6.2e-63   1.1e-59  201.2   2.5     1   229   262   483   262   484 0.99 E1-E2 ATPase
Hydrolase            PF00702.21   215 sp|Q5HL56|COPA_STAEQ -            794   8.2e-51  173.4   4.4   1   1   7.2e-54   1.3e-50  172.7   4.4     1   215   488   701   488   701 0.94 haloacid dehalogenase-like hydrolase
HMA                  PF00403.21    62 sp|Q5HL56|COPA_STAEQ -            794   6.8e-30  103.0   0.0   1   2   5.2e-16   9.6e-13   48.0   0.0     1    62     7    67     7    67 0.97 Heavy-metal-associated domain
HMA                  PF00403.21    62 sp|Q5HL56|COPA_STAEQ -            794   6.8e-30  103.0   0.0   2   2   2.4e-17   4.5e-14   52.3   0.0     2    62    75   135    74   135 0.97 Heavy-metal-associated domain
HAD                  PF12710.2    192 sp|Q5HL56|COPA_STAEQ -            794   2.7e-16   60.3   0.0   1   1   3.1e-19   5.8e-16   59.2   0.0     1   191   491   697   491   698 0.72 haloacid dehalogenase-like hydrolase
Hydrolase_3          PF08282.7    254 sp|Q5HL56|COPA_STAEQ -            794   0.00012   21.7  11.1   2   3   6.9e-05      0.13   11.8   0.1    15    59   619   662   613   665 0.90 haloacid dehalogenase-like hydrolase
Hydrolase_3          PF08282.7    254 sp|Q5HL56|COPA_STAEQ -            794   0.00012   21.7  11.1   3   3   3.6e-06    0.0067   16.0   0.4   201   242   680   721   670   723 0.90 haloacid dehalogenase-like hydrolase
Hydrolase_6          PF13344.1    101 sp|Q5HL56|COPA_STAEQ -            794   0.00047   20.0   0.4   2   2   6.8e-06     0.013   15.4   0.1     6    51   611   656   608   694 0.85 Haloacid dehalogenase-like hydrolase
E1-E2_ATPase         PF00122.15   230 sp|Q5HKB0|COPB_STAEQ -            674     1e-49  168.6   4.0   1   1   3.4e-53     1e-49  168.6   4.0     2   229   137   356   136   357 0.99 E1-E2 ATPase
Hydrolase            PF00702.21   215 sp|Q5HKB0|COPB_STAEQ -            674   2.5e-42  145.7   0.0   1   1   1.5e-45   4.3e-42  144.9   0.0     1   215   361   577   361   577 0.91 haloacid dehalogenase-like hydrolase
HAD                  PF12710.2    192 sp|Q5HKB0|COPB_STAEQ -            674   6.1e-14   52.6   0.0   1   1   3.7e-17   1.1e-13   51.8   0.0     3   191   366   573   364   574 0.69 haloacid dehalogenase-like hydrolase
Hydrolase_3          PF08282.7    254 sp|Q5HKB0|COPB_STAEQ -            674     0.001   18.6   5.6   3   3   6.6e-07     0.002   17.7   0.3   193   246   548   601   546   609 0.85 haloacid dehalogenase-like hydrolase
Receptor_2B4         PF11465.3    108 sp|Q5HKB0|COPB_STAEQ -            674     0.056   13.3   0.0   1   1   5.9e-05      0.17   11.7   0.0    49    97   443   490   418   496 0.88 Natural killer cell receptor 2B4
UbiA                 PF01040.13   257 sp|Q5HQ51|COXX_STAEQ -            303   3.4e-33  114.9  21.7   1   1     3e-37   4.5e-33  114.5  21.7     5   255    32   287    30   295 0.80 UbiA prenyltransferase family
CRCB                 PF02537.10   117 sp|Q5HND1|CRCB1_STAEQ -            121   3.7e-28   97.7  12.5   1   1   8.2e-32   4.1e-28   97.6  12.5     1   116     3   114     3   115 0.94 CrcB-like protein
DUF3815              PF12821.2    130 sp|Q5HND1|CRCB1_STAEQ -            121     0.047   13.6   0.8   1   2   9.6e-06     0.047   13.6   0.8    23    71     2    56     1    62 0.75 Protein of unknown function (DUF3815)
ABC2_membrane_5      PF13346.1    206 sp|Q5HND1|CRCB1_STAEQ -            121      0.51    9.6  10.8   1   1   0.00015      0.76    9.0  10.8    83   204     3   116     1   117 0.69 ABC-2 family transporter protein
CRCB                 PF02537.10   117 sp|Q5HND0|CRCB2_STAEQ -            117   6.9e-28   96.8   8.4   1   1   1.6e-31   7.7e-28   96.7   8.4     1   116     4   115     4   116 0.95 CrcB-like protein
Reo_sigma1           PF01664.11   219 sp|Q5HND0|CRCB2_STAEQ -            117     0.047   12.7   0.1   1   1   1.1e-05     0.056   12.5   0.1   128   170    56    98    25   106 0.78 Reovirus viral attachment protein sigma 1
Aminotran_5          PF00266.14   371 sp|Q5HQQ0|CSD_STAEQ  -            413  3.2e-164  546.0   0.8   1   1  1.7e-167  3.6e-164  545.8   0.8     2   371    29   398    28   398 0.99 Aminotransferase class-V
DegT_DnrJ_EryC1      PF01041.12   363 sp|Q5HQQ0|CSD_STAEQ  -            413   1.6e-10   40.6   0.8   1   1   1.2e-13   2.5e-10   39.9   0.8    46   155    93   212    67   238 0.79 DegT/DnrJ/EryC1/StrS aminotransferase family
Aminotran_1_2        PF00155.16   363 sp|Q5HQQ0|CSD_STAEQ  -            413   3.6e-10   39.3   0.2   1   1   3.1e-13   6.6e-10   38.4   0.1    36   244    62   250    28   262 0.81 Aminotransferase class I and II
Cys_Met_Meta_PP      PF01053.15   386 sp|Q5HQQ0|CSD_STAEQ  -            413   5.3e-10   38.1   0.1   1   1   4.1e-13   8.6e-10   37.4   0.1    78   203    95   230    57   256 0.83 Cys/Met metabolism PLP-dependent enzyme
Beta_elim_lyase      PF01212.16   290 sp|Q5HQQ0|CSD_STAEQ  -            413     1e-07   31.3   0.2   1   1   7.6e-11   1.6e-07   30.7   0.2    31   211    72   261    63   365 0.72 Beta-eliminating lyase
Pyridoxal_deC        PF00282.14   373 sp|Q5HQQ0|CSD_STAEQ  -            413   4.4e-05   22.0   0.1   1   1   3.6e-08   7.7e-05   21.3   0.1   153   273   132   239   110   253 0.81 Pyridoxal-dependent decarboxylase conserved domain
SelA                 PF03841.8    367 sp|Q5HQQ0|CSD_STAEQ  -            413    0.0002   20.2   0.3   1   1   3.5e-07   0.00075   18.3   0.3   125   234   156   250   138   254 0.79 L-seryl-tRNA selenium transferase
DEAD                 PF00270.24   169 sp|Q5HME0|CSHA_STAEQ -            509   7.4e-49  165.4   0.6   1   2   5.1e-51   1.5e-47  161.2   0.2     1   168    26   191    26   192 0.95 DEAD/DEAH box helicase
Helicase_C           PF00271.26    78 sp|Q5HME0|CSHA_STAEQ -            509   1.9e-27   94.9   0.2   2   2   6.3e-30   1.9e-26   91.7   0.0     3    78   260   335   258   335 0.97 Helicase conserved C-terminal domain
Flavi_DEAD           PF07652.9    148 sp|Q5HME0|CSHA_STAEQ -            509     0.018   14.7   0.1   1   2   4.7e-05      0.14   11.9   0.0    12    56    47    92    41   106 0.80 Flavivirus DEAD domain
CMS1                 PF14617.1    252 sp|Q5HME0|CSHA_STAEQ -            509     0.019   14.0   0.0   1   2   6.5e-06     0.019   14.0   0.0   130   210    73   152    60   197 0.83 U3-containing 90S pre-ribosomal complex subunit
ResIII               PF04851.10   184 sp|Q5HME0|CSHA_STAEQ -            509     0.038   13.8   1.6   1   2   2.8e-05     0.084   12.7   0.0    29    76    43    95    23   124 0.82 Type III restriction enzyme, res subunit
COX15-CtaA           PF02628.10   302 sp|Q5HQ52|CTAA_STAEQ -            302     5e-54  183.2  21.8   1   1   3.9e-58   5.8e-54  182.9  21.8     2   301     9   287     8   288 0.92 Cytochrome oxidase assembly protein
Peptidase_S41        PF03572.13   169 sp|Q5HPB7|CTPAL_STAEQ -            491     4e-49  166.2   2.5   1   1   3.7e-52   5.5e-49  165.8   0.8     1   168   226   389   226   390 0.95 Peptidase family S41
PDZ                  PF00595.19    81 sp|Q5HPB7|CTPAL_STAEQ -            491   8.7e-13   48.2   0.7   1   1   1.7e-15   2.5e-12   46.8   0.7     8    80   127   198   121   199 0.92 PDZ domain (Also known as DHR or GLGF)
PDZ_2                PF13180.1     82 sp|Q5HPB7|CTPAL_STAEQ -            491   9.4e-13   47.8   6.0   1   2   6.9e-16     1e-12   47.7   2.5     2    81   132   210   131   210 0.91 PDZ domain
PG_binding_1         PF01471.13    57 sp|Q5HPB7|CTPAL_STAEQ -            491   4.6e-12   45.7   0.2   1   1   9.9e-15   1.5e-11   44.1   0.1     3    54   414   465   412   468 0.93 Putative peptidoglycan binding domain
Ly49                 PF08391.5    119 sp|Q5HPB7|CTPAL_STAEQ -            491    0.0023   18.0   0.4   1   2   1.5e-06    0.0023   18.0   0.4     3    61    31    90    29   125 0.74 Ly49-like protein, N-terminal region
Herpes_gE            PF02480.11   439 sp|Q5HPB7|CTPAL_STAEQ -            491    0.0027   16.0   0.0   1   1     3e-06    0.0045   15.3   0.0   323   413     6    94     2   123 0.82 Alphaherpesvirus glycoprotein E
PG_binding_2         PF08823.6     74 sp|Q5HPB7|CTPAL_STAEQ -            491     0.017   15.2   0.1   1   1   2.7e-05      0.04   14.0   0.1    18    57   416   455   403   484 0.83 Putative peptidoglycan binding domain
FtsX                 PF02687.16   121 sp|Q5HPB7|CTPAL_STAEQ -            491     0.024   14.4   0.1   1   1   2.5e-05     0.037   13.7   0.1    83   119    23    59    10    61 0.91 FtsX-like permease family
Tricorn_PDZ          PF14685.1     88 sp|Q5HPB7|CTPAL_STAEQ -            491     0.053   13.3   1.0   1   2   0.00049      0.72    9.6   0.1    26    82   148   204   143   209 0.84 Tricorn protease PDZ domain
DUF3899              PF13038.1     92 sp|Q5HPB7|CTPAL_STAEQ -            491     0.076   13.1   0.2   1   1   0.00026      0.38   10.9   0.2    45    89     6    50     2    56 0.67 Domain of unknown function (DUF3899)
CtsR                 PF05848.6    152 sp|Q5HRN1|CTSR_STAEQ -            153   6.3e-60  201.5   2.3   1   1   9.5e-64     7e-60  201.4   2.3     1   151     1   151     1   152 0.99 Firmicute transcriptional repressor of class III stress genes (CtsR)
NifW                 PF03206.9    105 sp|Q5HRN1|CTSR_STAEQ -            153      0.13   12.3   0.1   1   1   2.6e-05      0.19   11.8   0.1    14    43     8    37     1    55 0.86 Nitrogen fixation protein NifW
S1_2                 PF13509.1     61 sp|Q5HPF1|CVFB_STAEQ -            298   7.8e-15   54.5   1.0   1   3   1.2e-14   4.6e-11   42.4   0.1     1    61     8    70     8    70 0.95 S1 domain
S1                   PF00575.18    74 sp|Q5HPF1|CVFB_STAEQ -            298    0.0013   18.7   0.0   1   2   0.00017      0.63   10.1   0.0    10    39    82   111    81   132 0.92 S1 RNA binding domain
CheC                 PF04509.7     38 sp|Q5HPF1|CVFB_STAEQ -            298     0.029   14.1   0.0   1   1   1.6e-05      0.06   13.0   0.0     4    32   253   282   251   283 0.88 CheC-like family
RNA_pol_Rbc25        PF08292.7    122 sp|Q5HPF1|CVFB_STAEQ -            298     0.071   13.3   0.0   1   1   4.3e-05      0.16   12.1   0.0     9    41    82   114    77   211 0.89 RNA polymerase III subunit Rpc25
APS_kinase           PF01583.15   157 sp|Q5HL02|CYSC_STAEQ -            199   2.4e-73  244.9   0.0   1   1   3.5e-76   2.8e-73  244.7   0.0     2   155    27   180    26   182 0.98 Adenylylsulphate kinase
AAA_33               PF13671.1    143 sp|Q5HL02|CYSC_STAEQ -            199   9.5e-10   38.5   0.0   1   1   1.6e-12   1.3e-09   38.0   0.0     1   115    29   142    29   167 0.86 AAA domain
AAA_18               PF13238.1    129 sp|Q5HL02|CYSC_STAEQ -            199   2.5e-06   27.8   0.3   1   1   1.2e-08     1e-05   25.8   0.3     1   108    30   141    30   151 0.58 AAA domain
AAA_17               PF13207.1    121 sp|Q5HL02|CYSC_STAEQ -            199     3e-05   24.8   0.0   1   1   5.9e-08   4.8e-05   24.1   0.0     1    40    29    71    29   149 0.69 AAA domain
Zeta_toxin           PF06414.7    201 sp|Q5HL02|CYSC_STAEQ -            199    0.0005   19.2   0.0   1   1   1.1e-06   0.00091   18.3   0.0     8    76    18    89    11   101 0.75 Zeta toxin
KTI12                PF08433.5    270 sp|Q5HL02|CYSC_STAEQ -            199   0.00099   18.3   0.0   1   1   2.2e-06    0.0018   17.5   0.0     4    50    30    79    28    95 0.78 Chromatin associated protein KTI12
AAA_29               PF13555.1     62 sp|Q5HL02|CYSC_STAEQ -            199    0.0038   16.7   0.0   1   1   7.7e-06    0.0063   16.0   0.0    21    44    25    48     3    61 0.70 P-loop containing region of AAA domain
ArgK                 PF03308.11   267 sp|Q5HL02|CYSC_STAEQ -            199    0.0071   15.1   0.0   1   1   1.3e-05     0.011   14.5   0.0    27    59    25    57     5    62 0.86 ArgK protein
Torsin               PF06309.6    127 sp|Q5HL02|CYSC_STAEQ -            199    0.0076   16.1   0.1   1   1   1.6e-05     0.013   15.3   0.1    46    83    20    57    12    68 0.89 Torsin
ABC_tran             PF00005.22   137 sp|Q5HL02|CYSC_STAEQ -            199    0.0079   16.4   0.0   1   1   1.4e-05     0.011   15.9   0.0    10    71    26    84     7   154 0.68 ABC transporter
CbiA                 PF01656.18   195 sp|Q5HL02|CYSC_STAEQ -            199     0.027   13.8   0.0   1   1   3.3e-05     0.027   13.8   0.0     6    37    34    65    29   196 0.87 CobQ/CobB/MinD/ParA nucleotide binding domain
PRK                  PF00485.13   194 sp|Q5HL02|CYSC_STAEQ -            199     0.041   13.4   0.0   1   1   7.3e-05      0.06   12.8   0.0     1    32    29    60    29    86 0.81 Phosphoribulokinase / Uridine kinase family
PEPCK_ATP            PF01293.15   467 sp|Q5HL02|CYSC_STAEQ -            199     0.056   11.9   0.0   1   1   9.6e-05     0.079   11.4   0.0   208   240    24    56     3    79 0.77 Phosphoenolpyruvate carboxykinase
DUF258               PF03193.11   161 sp|Q5HL02|CYSC_STAEQ -            199     0.057   12.6   0.2   1   2   0.00048      0.39    9.8   0.0    30    59    22    51     4   104 0.79 Protein of unknown function, DUF258
MobB                 PF03205.9    140 sp|Q5HL02|CYSC_STAEQ -            199     0.066   12.9   0.0   1   1   0.00016      0.13   11.9   0.0     2    30    29    57    28    66 0.90 Molybdopterin guanine dinucleotide synthesis protein B
DNA_pol3_delta2      PF13177.1    162 sp|Q5HL02|CYSC_STAEQ -            199     0.067   12.8   0.0   1   1   8.5e-05      0.07   12.7   0.0    11    51    19    59    10   189 0.76 DNA polymerase III, delta subunit
RNA_helicase         PF00910.17   107 sp|Q5HL02|CYSC_STAEQ -            199      0.11   12.6   0.0   1   1   0.00024       0.2   11.8   0.0     1    26    30    55    30    70 0.85 RNA helicase
Hexapep              PF00132.19    36 sp|Q5HRM4|CYSE_STAEQ -            213   2.5e-15   55.2  12.5   2   3   1.9e-08   9.4e-05   21.7   2.9    11    36    83   108    71   108 0.87 Bacterial transferase hexapeptide (six repeats)
Hexapep              PF00132.19    36 sp|Q5HRM4|CYSE_STAEQ -            213   2.5e-15   55.2  12.5   3   3   1.1e-12   5.2e-09   35.2   1.6     2    34   118   150   117   152 0.94 Bacterial transferase hexapeptide (six repeats)
Hexapep_2            PF14602.1     34 sp|Q5HRM4|CYSE_STAEQ -            213   2.5e-06   26.9  13.9   1   3   4.9e-06     0.024   14.1   2.7     2    18    86   104    71   107 0.62 Hexapeptide repeat of succinyl-transferase
Hexapep_2            PF14602.1     34 sp|Q5HRM4|CYSE_STAEQ -            213   2.5e-06   26.9  13.9   3   3   2.2e-05      0.11   12.1   0.3     2    16   136   150   135   155 0.87 Hexapeptide repeat of succinyl-transferase
SATase_N             PF06426.9    105 sp|Q5HRM4|CYSE_STAEQ -            213    0.0051   17.0   0.0   1   1   1.7e-06    0.0085   16.3   0.0    71   103     3    35     1    37 0.93 Serine acetyltransferase, N-terminal
PAPS_reduct          PF01507.14   174 sp|Q5HKZ5|CYSH_STAEQ -            243   3.1e-52  176.9   0.0   1   1   5.1e-56   3.8e-52  176.6   0.0     2   174    44   215    43   215 0.98 Phosphoadenosine phosphosulfate reductase family
FAM198               PF15051.1    326 sp|Q5HKZ5|CYSH_STAEQ -            243      0.05   12.2   0.0   1   1   8.1e-06      0.06   12.0   0.0    40   124   100   183    53   216 0.77 FAM198 protein
NIR_SIR              PF01077.17   157 sp|Q5HKZ7|CYSI_STAEQ -            572     9e-54  181.0   0.0   1   2   8.1e-51     6e-47  158.9   0.0     3   156   174   332   172   333 0.97 Nitrite and sulphite reductase 4Fe-4S domain
NIR_SIR              PF01077.17   157 sp|Q5HKZ7|CYSI_STAEQ -            572     9e-54  181.0   0.0   2   2   5.1e-08   0.00037   19.8   0.0     5   141   431   559   427   562 0.86 Nitrite and sulphite reductase 4Fe-4S domain
NIR_SIR_ferr         PF03460.12    69 sp|Q5HKZ7|CYSI_STAEQ -            572   2.1e-32  110.5   0.0   1   2   2.3e-19   1.7e-15   56.3   0.0     8    65    80   136    72   140 0.89 Nitrite/Sulfite reductase ferredoxin-like half domain
NIR_SIR_ferr         PF03460.12    69 sp|Q5HKZ7|CYSI_STAEQ -            572   2.1e-32  110.5   0.0   2   2   7.4e-18   5.5e-14   51.5   0.0    10    69   357   419   353   419 0.95 Nitrite/Sulfite reductase ferredoxin-like half domain
PALP                 PF00291.20   306 sp|Q5HRP1|CYSK_STAEQ -            310   1.1e-65  221.8   0.8   1   1   3.5e-69   1.3e-65  221.6   0.8     1   305     9   294     9   295 0.88 Pyridoxal-phosphate dependent enzyme
ADH_zinc_N           PF00107.21   130 sp|Q5HRP1|CYSK_STAEQ -            310     0.012   15.1   0.1   1   2   7.8e-05      0.29   10.6   0.0     1    53    78   131    77   202 0.77 Zinc-binding dehydrogenase
Glyco_tran_WecB      PF03808.8    172 sp|Q5HRP1|CYSK_STAEQ -            310      0.14   11.5   0.0   1   1   7.5e-05      0.28   10.5   0.0    29    81   152   205   144   212 0.85 Glycosyl transferase WecB/TagA/CpsF family
Aminotran_4          PF01063.14   231 sp|Q5HNG0|DAAA_STAEQ -            282   4.6e-38  130.9   0.0   1   1   3.7e-42   5.5e-38  130.7   0.0     3   231    45   273    43   273 0.87 Aminotransferase class IV
DAGK_cat             PF00781.19   130 sp|Q5HN36|DAGK_STAEQ -            316   9.4e-30  102.7   0.1   1   1   2.1e-33   1.5e-29  102.0   0.1     2   129     5   130     4   131 0.88 Diacylglycerol kinase catalytic domain
NAD_kinase           PF01513.16   285 sp|Q5HN36|DAGK_STAEQ -            316   1.1e-06   27.5   0.0   1   1   2.3e-10   1.7e-06   27.0   0.0    58   131    32   117     6   132 0.76 ATP-NAD kinase
DHDPS                PF00701.17   289 sp|Q5HPE7|DAPA_STAEQ -            294   1.2e-80  270.2   0.4   1   1   2.8e-84   1.4e-80  270.0   0.4     1   287     4   288     4   290 0.97 Dihydrodipicolinate synthetase family
Lon_2                PF13337.1    457 sp|Q5HPE7|DAPA_STAEQ -            294     0.031   12.6   0.0   1   1   9.7e-06     0.048   12.0   0.0   147   264    11   125     3   129 0.77 Putative ATP-dependent Lon protease
DapB_C               PF05173.9    132 sp|Q5HPE6|DAPB_STAEQ -            240   2.2e-39  134.2   0.1   1   1   1.3e-42   3.1e-39  133.7   0.1     1   130   109   239   109   240 0.89 Dihydrodipicolinate reductase, C-terminus
DapB_N               PF01113.15   124 sp|Q5HPE6|DAPB_STAEQ -            240     1e-15   57.7   0.0   1   1   1.1e-18   2.7e-15   56.3   0.0     1   124     1   106     1   106 0.88 Dihydrodipicolinate reductase, N-terminus
GFO_IDH_MocA         PF01408.17   120 sp|Q5HPE6|DAPB_STAEQ -            240     0.028   14.9   0.0   1   1   2.8e-05      0.07   13.6   0.0     1    55     1    53     1    91 0.81 Oxidoreductase family, NAD-binding Rossmann fold
TrkA_N               PF02254.13   116 sp|Q5HPE6|DAPB_STAEQ -            240     0.067   13.1   0.0   1   2   0.00011      0.27   11.2   0.0     1    75     3    86     3   116 0.69 TrkA-N domain
F420_oxidored        PF03807.12    96 sp|Q5HPE6|DAPB_STAEQ -            240     0.082   13.3   0.0   1   1    0.0001      0.25   11.7   0.0     2    46     3    44     2    73 0.82 NADP oxidoreductase coenzyme F420-dependent
NAD_binding_2        PF03446.10   163 sp|Q5HPE6|DAPB_STAEQ -            240      0.11   12.3   0.0   1   1   7.7e-05      0.19   11.5   0.0     3    44     2    44     1    92 0.83 NAD binding domain of 6-phosphogluconate dehydrogenase
Peptidase_M20        PF01546.23   189 sp|Q5HKI1|DAPE_STAEQ -            405   1.8e-35  122.1   0.4   1   1   4.7e-39   2.3e-35  121.7   0.4     2   187    69   399    68   401 0.92 Peptidase family M20/M25/M40
M20_dimer            PF07687.9    112 sp|Q5HKI1|DAPE_STAEQ -            405   5.7e-24   84.0   0.0   1   1     2e-27   9.7e-24   83.2   0.0     1   110   173   304   173   306 0.97 Peptidase dimerisation domain
Peptidase_M28        PF04389.12   179 sp|Q5HKI1|DAPE_STAEQ -            405   0.00084   19.1   0.1   1   1   3.3e-07    0.0016   18.2   0.1     2    73    66   152    65   231 0.79 Peptidase family M28
DapH_N               PF08503.5     83 sp|Q5HPE5|DAPH_STAEQ -            240     7e-33  112.6   0.1   1   1   2.4e-36   1.2e-32  111.8   0.1     1    83     5    88     5    88 0.98 Tetrahydrodipicolinate succinyltransferase N-terminal
Hexapep              PF00132.19    36 sp|Q5HPE5|DAPH_STAEQ -            240   3.8e-21   73.5  15.8   1   3     6e-07     0.003   17.0   0.0     7    35    92   120    91   120 0.96 Bacterial transferase hexapeptide (six repeats)
Hexapep              PF00132.19    36 sp|Q5HPE5|DAPH_STAEQ -            240   3.8e-21   73.5  15.8   2   3   6.3e-10   3.1e-06   26.4   1.7     1    36   122   157   122   157 0.96 Bacterial transferase hexapeptide (six repeats)
Hexapep              PF00132.19    36 sp|Q5HPE5|DAPH_STAEQ -            240   3.8e-21   73.5  15.8   3   3   4.5e-13   2.2e-09   36.3   4.0     2    35   167   200   166   201 0.96 Bacterial transferase hexapeptide (six repeats)
Hexapep_2            PF14602.1     34 sp|Q5HPE5|DAPH_STAEQ -            240   2.9e-14   52.3  16.4   2   3   8.2e-06     0.041   13.4   0.9     2    32   123   155   122   157 0.91 Hexapeptide repeat of succinyl-transferase
Hexapep_2            PF14602.1     34 sp|Q5HPE5|DAPH_STAEQ -            240   2.9e-14   52.3  16.4   3   3   5.3e-14   2.6e-10   39.6   4.7     1    34   166   201   166   201 0.96 Hexapeptide repeat of succinyl-transferase
URO-D                PF01208.12   343 sp|Q5HNA4|DCUP_STAEQ -            344  1.3e-115  385.9   0.0   1   1    2e-119  1.5e-115  385.8   0.0     2   343     4   341     3   341 0.97 Uroporphyrinogen decarboxylase (URO-D)
RNaseH_C             PF09293.5    122 sp|Q5HNA4|DCUP_STAEQ -            344     0.085   12.7   0.1   2   2   5.8e-05      0.43   10.4   0.0    57   120   165   232   154   234 0.83 T4 RNase H, C terminal
Dala_Dala_lig_C      PF07478.8    203 sp|Q5HMD8|DDL_STAEQ  -            357   4.3e-72  241.7   0.0   1   1   3.4e-75   7.1e-72  241.0   0.0     1   203   136   339   136   339 0.98 D-ala D-ala ligase C-terminus
Dala_Dala_lig_N      PF01820.16   117 sp|Q5HMD8|DDL_STAEQ  -            357   1.3e-35  122.2   0.1   1   1   1.1e-38   2.3e-35  121.4   0.1     2   116     5   118     4   119 0.92 D-ala D-ala ligase N-terminus
ATP-grasp_4          PF13535.1    184 sp|Q5HMD8|DDL_STAEQ  -            357     2e-14   53.7   0.0   1   1     2e-17   4.2e-14   52.6   0.0     3   177   128   309   126   313 0.78 ATP-grasp domain
ATP-grasp            PF02222.17   172 sp|Q5HMD8|DDL_STAEQ  -            357     2e-07   30.5   0.0   1   1   1.6e-10   3.5e-07   29.7   0.0    19   157   162   307   148   311 0.84 ATP-grasp domain
CPSase_L_D2          PF02786.12   211 sp|Q5HMD8|DDL_STAEQ  -            357   2.1e-06   27.1   0.0   1   1   1.7e-09   3.6e-06   26.4   0.0    33   178   166   309   145   310 0.83 Carbamoyl-phosphate synthase L chain, ATP binding domain
RimK                 PF08443.6    190 sp|Q5HMD8|DDL_STAEQ  -            357   7.4e-05   22.3   0.0   1   1   1.8e-07   0.00039   19.9   0.0    17   177   149   319   127   323 0.67 RimK-like ATP-grasp domain
ATPgrasp_ST          PF14397.1    285 sp|Q5HMD8|DDL_STAEQ  -            357   0.00035   19.7   0.1   1   2   4.5e-07   0.00096   18.3   0.0    26   126   129   217   119   222 0.82 Sugar-transfer associated ATP-grasp
Pep_deformylase      PF01327.16   157 sp|Q5HPX6|DEFL_STAEQ -            162   3.2e-38  130.6   0.4   1   1   5.1e-42   3.7e-38  130.3   0.4     1   152     3   147     3   152 0.96 Polypeptide deformylase
DUF4376              PF14301.1    111 sp|Q5HPX6|DEFL_STAEQ -            162    0.0087   16.1   0.0   1   1   2.2e-06     0.016   15.2   0.0    59    96   110   148    97   158 0.91 Domain of unknown function (DUF4376)
Pep_deformylase      PF01327.16   157 sp|Q5HQ78|DEF_STAEQ  -            183   6.4e-44  149.1   0.0   1   1   4.9e-48   7.2e-44  148.9   0.0     1   155     4   172     4   174 0.93 Polypeptide deformylase
Metalloenzyme        PF01676.13   252 sp|Q5HM86|DEOB_STAEQ -            396   2.4e-51  174.5   0.2   1   1   5.7e-55   2.8e-51  174.3   0.2     1   251     6   386     6   387 0.98 Metalloenzyme superfamily
Phosphodiest         PF01663.17   365 sp|Q5HM86|DEOB_STAEQ -            396    0.0003   20.2   0.5   3   3   4.9e-07    0.0024   17.2   0.2   201   255   289   338   268   367 0.78 Type I phosphodiesterase / nucleotide pyrophosphatase
DeoC                 PF01791.4    236 sp|Q5HM84|DEOC_STAEQ -            220   3.2e-60  203.3   8.3   1   1   7.1e-64   3.5e-60  203.2   8.3     3   236     4   213     2   213 0.97 DeoC/LacD family aldolase
His_biosynth         PF00977.16   229 sp|Q5HM84|DEOC_STAEQ -            220     0.011   14.9   2.0   2   2     6e-06      0.03   13.6   1.0    43    99   144   202   108   212 0.72 Histidine biosynthesis protein
DHO_dh               PF01180.16   295 sp|Q5HM84|DEOC_STAEQ -            220     0.036   13.0   3.6   2   2   6.7e-06     0.033   13.1   0.8   229   272   161   204   101   215 0.70 Dihydroorotate dehydrogenase
MMR_HSR1             PF01926.18   116 sp|Q5HP70|DER_STAEQ  -            436   7.9e-53  177.3   2.0   1   2   1.5e-26   6.9e-24   84.0   0.1     2   116     6   120     5   120 0.90 50S ribosome-binding GTPase
MMR_HSR1             PF01926.18   116 sp|Q5HP70|DER_STAEQ  -            436   7.9e-53  177.3   2.0   2   2   3.1e-29   1.4e-26   92.7   0.3     2   116   178   295   177   295 0.88 50S ribosome-binding GTPase
KH_dom-like          PF14714.1     80 sp|Q5HP70|DER_STAEQ  -            436   7.4e-33  112.3   0.7   1   1     3e-35   1.3e-32  111.5   0.2     1    80   353   433   353   433 0.97 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal
FeoB_N               PF02421.13   156 sp|Q5HP70|DER_STAEQ  -            436   1.1e-28   99.4   1.3   1   2   8.9e-16     4e-13   48.9   0.1     3   126     6   132     4   139 0.86 Ferrous iron transport protein B
FeoB_N               PF02421.13   156 sp|Q5HP70|DER_STAEQ  -            436   1.1e-28   99.4   1.3   2   2   5.6e-16   2.5e-13   49.5   0.2     2   125   177   306   176   336 0.88 Ferrous iron transport protein B
GTP_EFTU             PF00009.22   188 sp|Q5HP70|DER_STAEQ  -            436   2.5e-24   85.7   2.9   1   2     2e-10     9e-08   31.7   0.1     6   186     6   163     1   165 0.73 Elongation factor Tu GTP binding domain
GTP_EFTU             PF00009.22   188 sp|Q5HP70|DER_STAEQ  -            436   2.5e-24   85.7   2.9   2   2   2.8e-14   1.3e-11   44.3   0.6     3   184   175   345   173   349 0.75 Elongation factor Tu GTP binding domain
Miro                 PF08477.8    119 sp|Q5HP70|DER_STAEQ  -            436   1.5e-17   64.1   0.9   1   2   9.8e-11   4.4e-08   33.6   0.1     2   119     6   122     5   122 0.76 Miro-like protein
Miro                 PF08477.8    119 sp|Q5HP70|DER_STAEQ  -            436   1.5e-17   64.1   0.9   2   2   2.9e-09   1.3e-06   28.8   0.1     1   118   177   296   177   297 0.67 Miro-like protein
Dynamin_N            PF00350.18   168 sp|Q5HP70|DER_STAEQ  -            436   3.4e-16   59.4   4.3   1   4     8e-05     0.036   13.8   0.1     1    30     6    35     6    42 0.87 Dynamin family
Dynamin_N            PF00350.18   168 sp|Q5HP70|DER_STAEQ  -            436   3.4e-16   59.4   4.3   2   4   7.4e-05     0.033   13.9   0.0    93   166    43   120    39   122 0.84 Dynamin family
Dynamin_N            PF00350.18   168 sp|Q5HP70|DER_STAEQ  -            436   3.4e-16   59.4   4.3   3   4   4.8e-06    0.0022   17.8   0.1     2    40   179   218   178   223 0.78 Dynamin family
Dynamin_N            PF00350.18   168 sp|Q5HP70|DER_STAEQ  -            436   3.4e-16   59.4   4.3   4   4    0.0001     0.046   13.5   0.0    96   167   218   295   213   296 0.83 Dynamin family
AIG1                 PF04548.11   212 sp|Q5HP70|DER_STAEQ  -            436   3.8e-15   55.5   3.6   1   2   1.8e-08   8.3e-06   25.0   0.1     4   108     7   108     5   117 0.87 AIG1 family
AIG1                 PF04548.11   212 sp|Q5HP70|DER_STAEQ  -            436   3.8e-15   55.5   3.6   2   2   6.8e-10     3e-07   29.7   0.7     3   105   178   280   176   370 0.79 AIG1 family
Ras                  PF00071.17   162 sp|Q5HP70|DER_STAEQ  -            436   9.3e-08   31.6   3.4   1   2   8.6e-06    0.0039   16.6   0.1     2   118     6   125     5   132 0.76 Ras family
Ras                  PF00071.17   162 sp|Q5HP70|DER_STAEQ  -            436   9.3e-08   31.6   3.4   2   2   3.1e-05     0.014   14.7   0.9     2   156   178   343   177   349 0.71 Ras family
DUF258               PF03193.11   161 sp|Q5HP70|DER_STAEQ  -            436   1.3e-07   30.9   0.1   1   2   0.00087      0.39    9.8   0.1    36    61     4    29     1    73 0.76 Protein of unknown function, DUF258
DUF258               PF03193.11   161 sp|Q5HP70|DER_STAEQ  -            436   1.3e-07   30.9   0.1   2   2     3e-06    0.0013   17.8   0.0    40   101   180   237   169   258 0.76 Protein of unknown function, DUF258
ABC_tran             PF00005.22   137 sp|Q5HP70|DER_STAEQ  -            436   2.6e-05   24.5   1.7   2   2   9.3e-05     0.042   14.1   0.1    13    80   177   240   173   356 0.67 ABC transporter
cobW                 PF02492.14   178 sp|Q5HP70|DER_STAEQ  -            436   4.8e-05   22.8   9.5   4   4     4e-07   0.00018   21.0   0.6    83   176   221   319   203   321 0.79 CobW/HypB/UreG, nucleotide-binding domain
RNA_helicase         PF00910.17   107 sp|Q5HP70|DER_STAEQ  -            436   0.00012   22.1   0.0   2   2   0.00014     0.065   13.4   0.0     3    68   180   242   178   264 0.82 RNA helicase
AAA_18               PF13238.1    129 sp|Q5HP70|DER_STAEQ  -            436   0.00024   21.3   0.4   1   2    0.0015      0.69   10.2   0.0     1    19     6    24     6   128 0.74 AAA domain
Arf                  PF00025.16   175 sp|Q5HP70|DER_STAEQ  -            436   0.00026   20.3   0.8   1   2     1e-05    0.0046   16.2   0.0    18   128     7   124     3   131 0.86 ADP-ribosylation factor family
MobB                 PF03205.9    140 sp|Q5HP70|DER_STAEQ  -            436   0.00029   20.5   1.0   1   2   0.00019     0.086   12.5   0.1     1    21     4    24     4    29 0.92 Molybdopterin guanine dinucleotide synthesis protein B
AAA_17               PF13207.1    121 sp|Q5HP70|DER_STAEQ  -            436   0.00051   20.8   0.3   1   2   0.00091      0.41   11.4   0.0     1    21     5    25     5   109 0.67 AAA domain
SRPRB                PF09439.5    181 sp|Q5HP70|DER_STAEQ  -            436   0.00087   18.5   0.1   1   2    0.0005      0.23   10.6   0.0     3   105     3   109     1   129 0.57 Signal recognition particle receptor beta subunit
AAA                  PF00004.24   132 sp|Q5HP70|DER_STAEQ  -            436    0.0011   19.1   0.4   2   2    0.0017      0.78    9.9   0.0     3    74   180   275   178   320 0.55 ATPase family associated with various cellular activities (AAA)
Nuc_deoxyrib_tr      PF05014.10   113 sp|Q5HP70|DER_STAEQ  -            436    0.0024   17.7   0.2   2   2    0.0018      0.81    9.5   0.1    51   108   247   304   225   315 0.83 Nucleoside 2-deoxyribosyltransferase
CbiA                 PF01656.18   195 sp|Q5HP70|DER_STAEQ  -            436    0.0054   16.1   2.7   1   1   1.8e-05    0.0082   15.5   0.2    73   163   193   301   155   328 0.75 CobQ/CobB/MinD/ParA nucleotide binding domain
DUF705               PF05152.7    297 sp|Q5HP70|DER_STAEQ  -            436      0.04   12.9   0.3   1   1   0.00024      0.11   11.4   0.0   181   265    49   134    46   136 0.90 Protein of unknown function (DUF705)
SRP54                PF00448.17   196 sp|Q5HP70|DER_STAEQ  -            436      0.05   13.0   1.1   1   1   0.00018     0.082   12.3   0.3    72   127   210   271   193   306 0.64 SRP54-type protein, GTPase domain
AlaDh_PNT_C          PF01262.16   168 sp|Q5HNJ6|DHA_STAEQ  -            371   7.2e-53  178.5   0.4   1   1   1.2e-55   9.7e-53  178.1   0.4     1   168   148   297   148   297 0.98 Alanine dehydrogenase/PNT, C-terminal domain
AlaDh_PNT_N          PF05222.10   136 sp|Q5HNJ6|DHA_STAEQ  -            371   2.5e-46  157.0   0.0   1   1     7e-49   5.5e-46  155.9   0.0     1   136     4   136     4   136 0.99 Alanine dehydrogenase/PNT, N-terminal domain
2-Hacid_dh_C         PF02826.14   178 sp|Q5HNJ6|DHA_STAEQ  -            371   8.8e-08   31.4   0.6   1   1   2.1e-10   1.6e-07   30.6   0.1    38   127   169   267   162   285 0.82 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain
Shikimate_DH         PF01488.15   135 sp|Q5HNJ6|DHA_STAEQ  -            371   4.1e-07   30.1   0.1   1   1     1e-09   7.9e-07   29.2   0.1    14   110   169   268   163   273 0.85 Shikimate / quinate 5-dehydrogenase
Pyr_redox            PF00070.22    80 sp|Q5HNJ6|DHA_STAEQ  -            371   3.7e-05   24.0   0.1   1   1     1e-07   8.1e-05   22.9   0.1     1    58   169   227   169   231 0.84 Pyridine nucleotide-disulphide oxidoreductase
F420_oxidored        PF03807.12    96 sp|Q5HNJ6|DHA_STAEQ  -            371   0.00013   22.3   0.6   1   1   3.4e-07   0.00026   21.3   0.3     1    94   169   267   169   269 0.87 NADP oxidoreductase coenzyme F420-dependent
3HCDH_N              PF02737.13   180 sp|Q5HNJ6|DHA_STAEQ  -            371   0.00051   19.7   0.0   1   1   1.3e-06     0.001   18.7   0.0     1    44   169   212   169   235 0.89 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain
TrkA_N               PF02254.13   116 sp|Q5HNJ6|DHA_STAEQ  -            371   0.00069   19.6   0.3   1   1   3.3e-06    0.0026   17.7   0.1     1    41   170   210   170   230 0.86 TrkA-N domain
Pyr_redox_2          PF07992.9    201 sp|Q5HNJ6|DHA_STAEQ  -            371    0.0012   18.7   0.1   1   1   3.2e-06    0.0025   17.7   0.1     1    31   169   199   169   299 0.84 Pyridine nucleotide-disulphide oxidoreductase
GIDA                 PF01134.17   392 sp|Q5HNJ6|DHA_STAEQ  -            371    0.0023   16.8   0.1   1   1   3.8e-06    0.0029   16.5   0.1     1    35   169   203   169   273 0.91 Glucose inhibited division protein A
THF_DHG_CYH_C        PF02882.14   161 sp|Q5HNJ6|DHA_STAEQ  -            371    0.0033   16.5   0.2   1   1   7.7e-06     0.006   15.6   0.2    62   113   213   275   162   321 0.79 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain
NAD_binding_7        PF13241.1    103 sp|Q5HNJ6|DHA_STAEQ  -            371    0.0041   17.3   0.1   1   1   9.9e-06    0.0077   16.4   0.1     9    68   169   238   165   269 0.73 Putative NAD(P)-binding
NAD_binding_2        PF03446.10   163 sp|Q5HNJ6|DHA_STAEQ  -            371    0.0061   16.4   0.3   1   1   1.4e-05     0.011   15.5   0.3     3    93   169   266   167   273 0.83 NAD binding domain of 6-phosphogluconate dehydrogenase
AdoHcyase_NAD        PF00670.16   162 sp|Q5HNJ6|DHA_STAEQ  -            371     0.013   15.3   0.3   1   1   3.2e-05     0.025   14.4   0.3    23   110   168   267   163   293 0.79 S-adenosyl-L-homocysteine hydrolase, NAD binding domain
HI0933_like          PF03486.9    409 sp|Q5HNJ6|DHA_STAEQ  -            371     0.016   13.7   0.1   1   1   2.9e-05     0.022   13.2   0.1     2    36   169   203   168   215 0.91 HI0933-like protein
NAD_Gly3P_dh_N       PF01210.18   157 sp|Q5HNJ6|DHA_STAEQ  -            371     0.024   14.3   0.0   1   1   5.8e-05     0.045   13.4   0.0     1    40   169   208   169   238 0.94 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus
NAD_binding_10       PF13460.1    183 sp|Q5HNJ6|DHA_STAEQ  -            371     0.044   13.7   0.0   1   1   9.8e-05     0.077   13.0   0.0     1    39   170   208   170   261 0.79 NADH(P)-binding
UDPG_MGDP_dh_N       PF03721.9    185 sp|Q5HNJ6|DHA_STAEQ  -            371     0.044   13.1   0.0   1   1   0.00023      0.18   11.1   0.0     2    40   169   207   168   241 0.95 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain
XdhC_C               PF13478.1    136 sp|Q5HNJ6|DHA_STAEQ  -            371     0.096   13.0   0.0   1   1   0.00025       0.2   11.9   0.0     1    39   170   208   170   241 0.76 XdhC Rossmann domain
Pterin_bind          PF00809.17   210 sp|Q5HRP0|DHPS_STAEQ -            272   3.9e-68  228.9   0.2   1   1   6.6e-72   4.9e-68  228.6   0.2     1   209     9   211     9   212 0.97 Pterin binding enzyme
Helicase_C_2         PF13307.1    167 sp|Q5HP88|DING_STAEQ -            902   4.5e-34  117.8   1.5   1   1   1.6e-37   4.8e-34  117.7   0.1     1   165   715   873   715   875 0.96 Helicase C-terminal domain
RNase_T              PF00929.19   164 sp|Q5HP88|DING_STAEQ -            902   1.2e-28  100.4   2.0   1   1   4.2e-32   1.2e-28  100.4   2.0     2   163     8   161     7   162 0.97 Exonuclease
DEAD                 PF00270.24   169 sp|Q5HP88|DING_STAEQ -            902     4e-05   23.1   0.9   1   1   2.6e-06    0.0078   15.7   0.9     9    46   264   340   252   477 0.59 DEAD/DEAH box helicase
Helicase_C           PF00271.26    78 sp|Q5HP88|DING_STAEQ -            902    0.0003   20.5   0.4   1   1   6.4e-07    0.0019   18.0   0.0    18    77   758   845   745   846 0.89 Helicase conserved C-terminal domain
AMP-binding          PF00501.23   417 sp|Q5HQN0|DLTA_STAEQ -            485   3.4e-80  269.4   0.0   1   1   8.3e-84   4.1e-80  269.2   0.0     3   416    10   386     8   387 0.83 AMP-binding enzyme
AMP-binding_C        PF13193.1     73 sp|Q5HQN0|DLTA_STAEQ -            485   6.5e-13   49.4   0.1   1   1   5.1e-16   2.5e-12   47.5   0.1     1    73   395   473   395   473 0.89 AMP-binding enzyme C-terminal domain
YolD                 PF08863.5     92 sp|Q5HQN0|DLTA_STAEQ -            485     0.013   15.3   0.4   1   1   9.8e-06     0.048   13.5   0.0    27    83   392   446   390   450 0.90 YolD-like protein
Bac_DnaA             PF00308.13   219 sp|Q5HJZ9|DNAA_STAEQ -            451  1.8e-101  338.3   0.3   1   1    4e-104  2.8e-101  337.7   0.3     4   218   117   331   114   332 0.98 Bacterial dnaA  protein
Bac_DnaA_C           PF08299.6     70 sp|Q5HJZ9|DNAA_STAEQ -            451   3.1e-31  107.0   0.1   1   1   1.1e-33   7.4e-31  105.8   0.1     1    70   358   427   358   427 0.99 Bacterial dnaA protein helix-turn-helix
IstB_IS21            PF01695.12   178 sp|Q5HJZ9|DNAA_STAEQ -            451   1.8e-13   50.2   0.0   1   1   4.8e-16   3.4e-13   49.4   0.0    49   153   149   256   140   262 0.89 IstB-like ATP binding protein
AAA                  PF00004.24   132 sp|Q5HJZ9|DNAA_STAEQ -            451   1.2e-08   35.2   0.1   1   1   6.8e-11   4.8e-08   33.2   0.0     2   129   151   269   150   272 0.81 ATPase family associated with various cellular activities (AAA)
DnaA_N               PF11638.3     65 sp|Q5HJZ9|DNAA_STAEQ -            451   1.7e-08   33.8   0.7   1   1   7.7e-11   5.4e-08   32.2   0.7     2    61     5    63     4    66 0.94 DnaA N-terminal domain
AAA_14               PF13173.1    128 sp|Q5HJZ9|DNAA_STAEQ -            451   1.7e-06   27.9   0.4   1   1   1.1e-08   7.8e-06   25.8   0.1     3   113   148   267   146   282 0.72 AAA domain
Arch_ATPase          PF01637.13   234 sp|Q5HJZ9|DNAA_STAEQ -            451   6.5e-06   26.0   0.7   1   2   9.3e-09   6.5e-06   26.0   0.7    18   125   145   251   139   261 0.68 Archaeal ATPase
RNA_helicase         PF00910.17   107 sp|Q5HJZ9|DNAA_STAEQ -            451     2e-05   24.7   1.0   1   1   1.3e-07   8.9e-05   22.6   0.2     1    84   150   247   150   258 0.77 RNA helicase
DNA_pol3_delta       PF06144.8    172 sp|Q5HJZ9|DNAA_STAEQ -            451   0.00017   21.1   1.2   1   1   5.1e-07   0.00036   20.0   1.2    50   170   200   325   164   327 0.77 DNA polymerase III, delta subunit
AFG1_ATPase          PF03969.11   362 sp|Q5HJZ9|DNAA_STAEQ -            451   0.00035   19.5   0.7   1   2   4.8e-05     0.034   12.9   0.1    60    81   145   166   129   198 0.85 AFG1-like ATPase
Kinesin              PF00225.18   335 sp|Q5HJZ9|DNAA_STAEQ -            451    0.0021   16.8   0.2   1   1     4e-06    0.0028   16.4   0.2     3    96    74   173    72   379 0.80 Kinesin motor domain
AAA_16               PF13191.1    185 sp|Q5HJZ9|DNAA_STAEQ -            451    0.0026   17.7   0.0   1   1   7.3e-06    0.0051   16.8   0.0    25   136   148   266   134   349 0.81 AAA ATPase domain
AAA_25               PF13481.1    194 sp|Q5HJZ9|DNAA_STAEQ -            451    0.0061   15.9   0.0   1   1     3e-05     0.021   14.2   0.0    36   112   150   241   145   274 0.65 AAA domain
AAA_19               PF13245.1     76 sp|Q5HJZ9|DNAA_STAEQ -            451    0.0066   16.1   0.0   1   1   2.1e-05     0.015   15.0   0.0     8    50   144   184   138   205 0.71 Part of AAA domain
Sigma54_activ_2      PF14532.1    138 sp|Q5HJZ9|DNAA_STAEQ -            451     0.015   15.3   0.0   1   1    0.0001     0.072   13.1   0.0    19   115   145   258   136   267 0.71 Sigma-54 interaction domain
DUF2075              PF09848.4    352 sp|Q5HJZ9|DNAA_STAEQ -            451     0.025   13.5   1.7   2   2    0.0011      0.74    8.7   0.3   118   166   209   267   194   273 0.81 Uncharacterized conserved protein (DUF2075)
Hydrolase_3          PF08282.7    254 sp|Q5HJZ9|DNAA_STAEQ -            451     0.059   12.9   0.0   1   2   8.3e-05     0.059   12.9   0.0    11    53   223   265   211   270 0.89 haloacid dehalogenase-like hydrolase
NACHT                PF05729.7    166 sp|Q5HJZ9|DNAA_STAEQ -            451       0.1   12.2   0.4   1   1   0.00078      0.55    9.8   0.1     2    37   149   180   148   276 0.85 NACHT domain
Toprim_N             PF08275.6    128 sp|Q5HNY6|DNAG_STAEQ -            598   1.4e-39  135.0   1.4   1   1   6.4e-43   1.4e-39  135.0   1.4     2   128   126   253   125   253 0.92 DNA primase catalytic core, N-terminal domain
zf-CHC2              PF01807.15    98 sp|Q5HNY6|DNAG_STAEQ -            598   1.6e-38  130.1   2.7   1   2   2.9e-41     6e-38  128.3   0.5     2    95     4    97     3   100 0.97 CHC2 zinc finger
Toprim_4             PF13662.1     81 sp|Q5HNY6|DNAG_STAEQ -            598   2.2e-15   56.4   0.1   1   1   2.6e-18   5.6e-15   55.1   0.0     2    80   261   336   260   337 0.95 Toprim domain
Toprim_2             PF13155.1     96 sp|Q5HNY6|DNAG_STAEQ -            598   2.3e-09   37.4   0.0   1   1   4.3e-12     9e-09   35.5   0.0     2    95   264   347   263   348 0.87 Toprim-like
DnaB                 PF00772.16   103 sp|Q5HNY6|DNAG_STAEQ -            598   5.7e-06   26.1   2.9   1   1     8e-09   1.7e-05   24.6   2.9     3   102   459   556   457   557 0.85 DnaB-like helicase N terminal domain
Toprim               PF01751.17   100 sp|Q5HNY6|DNAG_STAEQ -            598   0.00083   19.2   0.0   1   1   1.4e-06     0.003   17.4   0.0     1    90   261   332   261   338 0.89 Toprim domain
CTDII                PF01556.13    81 sp|Q5HNW7|DNAJ_STAEQ -            373   2.6e-35  120.1   3.9   1   3   0.00014      0.29   11.0   0.0     1    41   115   155   115   173 0.76 DnaJ C terminal domain
CTDII                PF01556.13    81 sp|Q5HNW7|DNAJ_STAEQ -            373   2.6e-35  120.1   3.9   2   3   3.8e-10   8.1e-07   28.8   0.1    28    71   214   255   201   262 0.86 DnaJ C terminal domain
CTDII                PF01556.13    81 sp|Q5HNW7|DNAJ_STAEQ -            373   2.6e-35  120.1   3.9   3   3   3.7e-26   7.8e-23   80.1   0.3     1    81   265   343   265   343 0.97 DnaJ C terminal domain
DnaJ                 PF00226.26    64 sp|Q5HNW7|DNAJ_STAEQ -            373   4.8e-29   99.8   3.8   1   1   5.3e-32   1.1e-28   98.6   3.8     1    64     5    66     5    66 0.99 DnaJ domain
DnaJ_CXXCXGXG        PF00684.14    66 sp|Q5HNW7|DNAJ_STAEQ -            373   1.3e-15   57.2  16.8   1   1   9.7e-19   2.1e-15   56.5  16.8     1    66   143   207   143   207 0.99 DnaJ central domain
PM0188               PF11477.3    381 sp|Q5HNW7|DNAJ_STAEQ -            373      0.12   11.1   0.2   1   1   9.6e-05       0.2   10.4   0.2   209   238   334   363   325   373 0.82 Sialyltransferase PMO188
HSP70                PF00012.15   602 sp|Q5HNW6|DNAK_STAEQ -            609  2.3e-250  831.6  21.5   1   2   6.7e-32   1.7e-28   98.9   0.3     1    74     4    76     4    80 0.97 Hsp70 protein
HSP70                PF00012.15   602 sp|Q5HNW6|DNAK_STAEQ -            609  2.3e-250  831.6  21.5   2   2    3e-225  7.5e-222  737.5  15.7   101   602    77   574    75   574 0.99 Hsp70 protein
MreB_Mbl             PF06723.8    327 sp|Q5HNW6|DNAK_STAEQ -            609   1.8e-21   76.0   3.7   1   2   7.4e-25   1.8e-21   76.0   3.7     3   317     4   347     2   353 0.71 MreB/Mbl protein
Hydantoinase_A       PF01968.13   290 sp|Q5HNW6|DNAK_STAEQ -            609    0.0087   15.1   9.0   2   4   9.6e-06     0.024   13.7   0.1    51    96   135   181    99   192 0.85 Hydantoinase/oxoprolinase
FtsA                 PF14450.1    120 sp|Q5HNW6|DNAK_STAEQ -            609     0.057   13.2  14.2   1   3   0.00014      0.35   10.7   0.7     1    90     4   105     4   153 0.61 Cell division protein FtsA
Alpha-E              PF04168.7    311 sp|Q5HNW6|DNAK_STAEQ -            609      0.16   11.2   0.8   1   1   0.00012      0.29   10.4   0.8   237   307   511   580   510   582 0.82 A predicted alpha-helical domain with a conserved ER motif.
DNA_ligase_aden      PF01653.13   315 sp|Q5HN30|DNLJ_STAEQ -            665  7.1e-129  429.2   0.4   1   1  9.5e-132  1.2e-128  428.5   0.4     3   315     4   311     2   311 0.97 NAD-dependent DNA ligase adenylation domain
DNA_ligase_OB        PF03120.11    82 sp|Q5HN30|DNLJ_STAEQ -            665     3e-34  116.5   2.2   1   1   5.5e-37   6.8e-34  115.3   1.8     2    80   314   392   313   394 0.97 NAD-dependent DNA ligase OB-fold domain
HHH_2                PF12826.2     64 sp|Q5HN30|DNLJ_STAEQ -            665   4.4e-20   71.3   0.1   1   1   1.2e-22   1.4e-19   69.6   0.1     2    64   503   565   502   565 0.98 Helix-hairpin-helix motif
HHH_5                PF14520.1     60 sp|Q5HN30|DNLJ_STAEQ -            665   5.1e-16   58.5   0.0   1   2   4.6e-11   5.7e-08   32.8   0.0     3    59   436   493   434   494 0.93 Helix-hairpin-helix domain
HHH_5                PF14520.1     60 sp|Q5HN30|DNLJ_STAEQ -            665   5.1e-16   58.5   0.0   2   2   5.6e-08   6.9e-05   22.9   0.0     8    59   507   557   501   558 0.94 Helix-hairpin-helix domain
DNA_ligase_ZBD       PF03119.11    28 sp|Q5HN30|DNLJ_STAEQ -            665   1.6e-11   43.6   5.9   1   1   1.4e-14   1.7e-11   43.6   3.8     1    28   400   426   400   426 0.98 NAD-dependent DNA ligase C4 zinc finger domain
BRCT                 PF00533.21    78 sp|Q5HN30|DNLJ_STAEQ -            665   9.2e-11   41.7   0.0   1   1   1.5e-13   1.9e-10   40.7   0.0     4    72   589   656   586   660 0.94 BRCA1 C Terminus (BRCT) domain
RNA_pol_A_CTD        PF03118.10    67 sp|Q5HN30|DNLJ_STAEQ -            665   8.5e-05   21.9   0.9   2   2   0.00012      0.15   11.5   0.0    31    66   522   557   509   558 0.84 Bacterial RNA polymerase, alpha chain C terminal domain
zf-NADH-PPase        PF09297.6     32 sp|Q5HN30|DNLJ_STAEQ -            665   0.00028   20.3   1.4   1   1   4.3e-07   0.00053   19.4   1.4     5    29   400   426   399   427 0.95 NADH pyrophosphatase zinc ribbon domain
PTCB-BRCT            PF12738.2     63 sp|Q5HN30|DNLJ_STAEQ -            665   0.00089   19.0   0.2   1   1   1.8e-06    0.0022   17.7   0.2     3    58   596   652   595   654 0.88 twin BRCT domain
zf-IS66              PF13005.2     47 sp|Q5HN30|DNLJ_STAEQ -            665     0.019   14.9   1.4   1   1   3.9e-05     0.048   13.6   0.7     2    20   398   415   397   420 0.90 zinc-finger binding domain of transposase IS66
zf-tcix              PF14952.1     44 sp|Q5HN30|DNLJ_STAEQ -            665      0.13   11.5   0.3   1   1    0.0002      0.24   10.7   0.3    13    36   400   427   399   431 0.88 Putative treble-clef, zinc-finger, Zn-binding
DNA_pol3_alpha       PF07733.7    426 sp|Q5HNK2|DPO3A_STAEQ -           1065  2.1e-165  550.3   0.0   1   1  1.7e-168    5e-165  549.0   0.0    13   426   259   667   245   667 0.96 Bacterial DNA polymerase III alpha subunit
HHH_6                PF14579.1     90 sp|Q5HNK2|DPO3A_STAEQ -           1065   4.7e-23   81.0   0.0   1   1   5.4e-26   1.6e-22   79.3   0.0     2    89   741   828   740   829 0.94 Helix-hairpin-helix motif
PHP                  PF02811.14   175 sp|Q5HNK2|DPO3A_STAEQ -           1065     1e-20   74.2   0.3   1   1   3.4e-24     1e-20   74.2   0.3     2   124     4   122     3   142 0.92 PHP domain
tRNA_anti-codon      PF01336.20    75 sp|Q5HNK2|DPO3A_STAEQ -           1065   6.1e-08   32.4   0.1   2   2   1.6e-10   4.7e-07   29.5   0.1     7    72   918   983   916   986 0.94 OB-fold nucleic acid binding domain
HHH_3                PF12836.2     65 sp|Q5HNK2|DPO3A_STAEQ -           1065     0.026   14.4   0.0   1   1   2.7e-05     0.081   12.8   0.0    16    46   766   796   759   799 0.88 Helix-hairpin-helix motif
DNA_pol3_alpha       PF07733.7    426 sp|Q5HPS7|DPO3_STAEQ -           1438  1.7e-104  349.6   0.0   1   1  2.8e-105    3e-102  342.2   0.0     2   425   824  1246   823  1247 0.96 Bacterial DNA polymerase III alpha subunit
PHP                  PF02811.14   175 sp|Q5HPS7|DPO3_STAEQ -           1438   1.8e-60  203.7   0.0   1   1   2.1e-62   2.2e-59  200.1   0.0     1   170   336   714   336   722 0.99 PHP domain
RNase_T              PF00929.19   164 sp|Q5HPS7|DPO3_STAEQ -           1438   9.4e-42  143.0   0.2   1   1   3.6e-44   3.8e-41  141.0   0.2     1   164   423   578   423   578 0.97 Exonuclease
DNA_pol3_a_NII       PF11490.3    117 sp|Q5HPS7|DPO3_STAEQ -           1438   3.5e-21   75.0   2.9   1   1   1.1e-23   1.2e-20   73.2   2.9     1   116    94   207    94   208 0.97 DNA polymerase III polC-type N-terminus II
DNA_pol3_a_NI        PF14480.1     76 sp|Q5HPS7|DPO3_STAEQ -           1438   1.6e-17   62.8   4.0   1   1   1.5e-20   1.6e-17   62.8   4.0     1    75     7    81     7    82 0.98 DNA polymerase III polC-type N-terminus I
HHH_6                PF14579.1     90 sp|Q5HPS7|DPO3_STAEQ -           1438   4.8e-10   39.3   0.0   1   1   1.2e-12   1.2e-09   38.0   0.0     1    83  1348  1428  1348  1433 0.91 Helix-hairpin-helix motif
HHH_3                PF12836.2     65 sp|Q5HPS7|DPO3_STAEQ -           1438   5.9e-09   35.7   0.1   1   1   3.1e-11   3.3e-08   33.3   0.0    18    59  1377  1417  1375  1420 0.92 Helix-hairpin-helix motif
RNase_H_2            PF13482.1    164 sp|Q5HPS7|DPO3_STAEQ -           1438    0.0015   18.3   0.4   1   1   2.4e-05     0.025   14.3   0.1     1   119   423   564   423   599 0.67 RNase_H superfamily
tRNA_anti-codon      PF01336.20    75 sp|Q5HPS7|DPO3_STAEQ -           1438    0.0015   18.3   0.2   1   1   3.9e-06    0.0041   16.9   0.2     1    60   240   306   240   322 0.84 OB-fold nucleic acid binding domain
YhfH                 PF14149.1     37 sp|Q5HPS7|DPO3_STAEQ -           1438     0.018   14.7   0.7   1   1   5.6e-05     0.059   13.1   0.7    11    27   931   948   930   950 0.86 YhfH-like protein
DUF3269              PF11673.3     73 sp|Q5HPS7|DPO3_STAEQ -           1438     0.078   13.4   0.0   1   1   0.00065      0.69   10.3   0.0     5    48   737   781   734   797 0.86 Protein of unknown function (DUF3269)
PsbU                 PF06514.6     93 sp|Q5HPS7|DPO3_STAEQ -           1438      0.08   12.7   0.0   1   1   0.00072      0.76    9.6   0.0    24    65  1374  1418  1368  1423 0.84 Photosystem II 12 kDa extrinsic protein (PsbU)
zf-FPG_IleRS         PF06827.9     30 sp|Q5HPS7|DPO3_STAEQ -           1438      0.46   10.1   2.7   1   1   0.00034      0.36   10.5   0.1     2    16   934   948   933   949 0.93 Zinc finger found in FPG and IleRS
DUF2072              PF09845.4    131 sp|Q5HPS7|DPO3_STAEQ -           1438         3    7.7   9.2   1   1   0.00018      0.19   11.6   2.0    19   111   147   261   136   280 0.77 Zn-ribbon containing protein (DUF2072)
IMS                  PF00817.15   149 sp|Q5HN39|DPO4_STAEQ -            356   7.2e-51  171.9   0.1   1   1   3.1e-54   1.5e-50  170.8   0.0     1   148     9   155     9   156 0.98 impB/mucB/samB family
IMS_C                PF11799.3    127 sp|Q5HN39|DPO4_STAEQ -            356     2e-20   73.0   0.2   1   1   6.6e-24   3.3e-20   72.3   0.2     3   122   235   348   233   353 0.92 impB/mucB/samB family C-terminal domain
IMS_HHH              PF11798.3     32 sp|Q5HN39|DPO4_STAEQ -            356   3.3e-06   26.8   0.0   1   2   2.4e-08   0.00012   21.9   0.0     2    32   169   199   168   199 0.94 IMS family HHH motif
SGL                  PF08450.7    246 sp|Q5HKM9|DRP35_STAEQ -            325   1.9e-33  115.8   0.0   1   1   6.5e-37   2.4e-33  115.5   0.0     8   224    50   271    46   294 0.87 SMP-30/Gluconolaconase/LRE-like region
Str_synth            PF03088.11    89 sp|Q5HKM9|DRP35_STAEQ -            325   3.7e-08   33.3   0.0   2   2   6.6e-10   2.4e-06   27.4   0.0    33    84   156   207   136   212 0.91 Strictosidine synthase
Arylesterase         PF01731.15    86 sp|Q5HKM9|DRP35_STAEQ -            325   2.7e-06   27.2   0.0   1   1   1.6e-09   6.1e-06   26.1   0.0    36    82   160   208   131   212 0.82 Arylesterase
NHL                  PF01436.16    28 sp|Q5HKM9|DRP35_STAEQ -            325   1.5e-05   24.6   0.4   3   3   1.9e-05     0.069   13.1   0.1     8    28   237   257   233   257 0.96 NHL repeat
Tyr_Deacylase        PF02580.11   145 sp|Q5HNR9|DTD_STAEQ  -            150   1.2e-47  161.5   0.2   1   1   1.8e-51   1.3e-47  161.3   0.2     1   144     2   143     2   144 0.98 D-Tyr-tRNA(Tyr) deacylase
DUF1597              PF07642.6    344 sp|Q5HNR9|DTD_STAEQ  -            150     0.019   14.0   0.1   1   1   3.2e-06     0.023   13.7   0.1    24   116    44   132    25   135 0.80 Outer membrane protein family (DUF1597)
Dus                  PF01207.12   310 sp|Q5HKD5|DUS_STAEQ  -            326   3.1e-48  164.2   0.0   1   1   7.5e-52   3.7e-48  163.9   0.0     1   305    15   316    15   322 0.91 Dihydrouridine synthase (Dus)
Glycos_transf_1      PF00534.15   172 sp|Q5HKD5|DUS_STAEQ  -            326       0.1   12.0   0.0   1   1   4.8e-05      0.24   10.8   0.0    31    72   186   227   177   232 0.89 Glycosyl transferases group 1
Nod_GRP              PF07806.6     38 sp|Q5HKD5|DUS_STAEQ  -            326       0.2   11.3   0.8   1   1    0.0001       0.5   10.0   0.8    10    18   149   157   142   158 0.85 Nodule-specific GRP repeat
DHFR_1               PF00186.14   161 sp|Q5HPB1|DYR_STAEQ  -            161   3.4e-55  186.0   0.0   1   1   5.2e-59   3.8e-55  185.8   0.0     2   161     3   157     2   157 0.96 Dihydrofolate reductase
DUF1415              PF07209.7    174 sp|Q5HPB1|DYR_STAEQ  -            161     0.021   14.5   0.0   1   1   3.6e-06     0.027   14.2   0.0    83   139    99   158    64   160 0.81 Protein of unknown function (DUF1415)
ABC_tran             PF00005.22   137 sp|Q5HM27|ECFA1_STAEQ -            269   5.2e-36  123.9   0.1   1   2   8.6e-38   6.4e-35  120.4   0.0     1   136    25   170    25   171 0.93 ABC transporter
SMC_N                PF02463.14   220 sp|Q5HM27|ECFA1_STAEQ -            269   4.9e-11   42.2   0.8   1   1   1.2e-13   9.1e-11   41.3   0.8    25   206    36   208    24   221 0.74 RecF/RecN/SMC N terminal domain
AAA_21               PF13304.1    303 sp|Q5HM27|ECFA1_STAEQ -            269   1.9e-09   37.8   0.4   1   2   1.7e-05     0.012   15.5   0.1     2    25    38    65    38   118 0.62 AAA domain
AAA_21               PF13304.1    303 sp|Q5HM27|ECFA1_STAEQ -            269   1.9e-09   37.8   0.4   2   2     3e-07   0.00022   21.2   0.1   213   298   120   202    81   207 0.78 AAA domain
AAA_29               PF13555.1     62 sp|Q5HM27|ECFA1_STAEQ -            269    0.0002   20.8   0.1   1   1   1.1e-06   0.00085   18.8   0.1    15    39    28    51    23    57 0.82 P-loop containing region of AAA domain
AAA_15               PF13175.1    415 sp|Q5HM27|ECFA1_STAEQ -            269   0.00023   20.3   0.2   1   2   0.00016      0.12   11.3   0.0    12    38    10    51     7   127 0.77 AAA ATPase domain
AAA_22               PF13401.1    131 sp|Q5HM27|ECFA1_STAEQ -            269    0.0047   17.0   0.1   1   1   1.7e-05     0.013   15.6   0.1     7   128    38   204    34   207 0.80 AAA domain
AAA_23               PF13476.1    202 sp|Q5HM27|ECFA1_STAEQ -            269    0.0047   17.2   0.1   1   1   1.5e-05     0.011   16.0   0.1    22    37    38    53    21    58 0.86 AAA domain
AAA_16               PF13191.1    185 sp|Q5HM27|ECFA1_STAEQ -            269    0.0053   16.7   0.0   1   1   1.6e-05     0.012   15.6   0.0    23   162    34   173    20   214 0.61 AAA ATPase domain
DUF258               PF03193.11   161 sp|Q5HM27|ECFA1_STAEQ -            269     0.008   15.3   0.1   1   2   0.00037      0.27   10.3   0.0    26    62    25    62     9    86 0.77 Protein of unknown function, DUF258
AAA                  PF00004.24   132 sp|Q5HM27|ECFA1_STAEQ -            269    0.0086   16.2   1.5   1   1   0.00061      0.45   10.7   1.5     4   114    41   205    38   213 0.54 ATPase family associated with various cellular activities (AAA)
AAA_25               PF13481.1    194 sp|Q5HM27|ECFA1_STAEQ -            269     0.011   15.1   0.4   1   1   4.3e-05     0.032   13.6   0.4    30    53    32    54     6   201 0.79 AAA domain
SbcCD_C              PF13558.1     90 sp|Q5HM27|ECFA1_STAEQ -            269     0.023   14.6   0.1   1   1   0.00044      0.32   10.9   0.1    31    89   141   186   115   187 0.75 Putative exonuclease SbcCD, C subunit
AAA_13               PF13166.1    712 sp|Q5HM27|ECFA1_STAEQ -            269     0.042   12.3   0.0   1   1   7.3e-05     0.054   11.9   0.0    19    41    38    60    26   137 0.86 AAA domain
Pox_C4_C10           PF03336.8    339 sp|Q5HM27|ECFA1_STAEQ -            269     0.058   12.1   1.1   1   1   0.00011     0.084   11.6   0.2    65   106   178   219   162   222 0.84 Poxvirus C4/C10 protein
AAA_33               PF13671.1    143 sp|Q5HM27|ECFA1_STAEQ -            269     0.063   13.1   0.0   1   2   0.00075      0.55   10.0   0.0     4    19    40    55    38    91 0.88 AAA domain
AAA_17               PF13207.1    121 sp|Q5HM27|ECFA1_STAEQ -            269     0.065   14.0   0.6   1   1    0.0003      0.22   12.3   0.3     4    18    40    54    39    58 0.93 AAA domain
AAA_10               PF12846.2    304 sp|Q5HM27|ECFA1_STAEQ -            269     0.067   12.6   0.0   1   2    0.0011      0.85    8.9   0.0     6    22    40    56    37   103 0.92 AAA-like domain
ABC_tran             PF00005.22   137 sp|Q5HM28|ECFA2_STAEQ -            286   1.2e-30  106.6   1.0   1   1     5e-33     2e-30  105.8   0.1     1   137    23   174    23   174 0.89 ABC transporter
AAA_21               PF13304.1    303 sp|Q5HM28|ECFA2_STAEQ -            286   4.8e-15   56.2   0.8   1   1   1.2e-17   4.8e-15   56.2   0.8     3   298    37   205    35   210 0.95 AAA domain
SMC_N                PF02463.14   220 sp|Q5HM28|ECFA2_STAEQ -            286   3.2e-08   33.0   1.1   1   1   1.2e-10   4.9e-08   32.4   1.1    24   206    33   213    18   226 0.74 RecF/RecN/SMC N terminal domain
AAA_29               PF13555.1     62 sp|Q5HM28|ECFA2_STAEQ -            286   1.6e-06   27.5   0.1   1   1   9.6e-09   3.7e-06   26.3   0.1    19    56    30    67    18    69 0.80 P-loop containing region of AAA domain
AAA_23               PF13476.1    202 sp|Q5HM28|ECFA2_STAEQ -            286   2.3e-06   28.0   2.2   1   1   1.3e-08     5e-06   26.9   2.2     7   199    20   266    18   269 0.59 AAA domain
DUF258               PF03193.11   161 sp|Q5HM28|ECFA2_STAEQ -            286   1.8e-05   24.0   0.1   1   1   8.5e-08   3.3e-05   23.1   0.1    22    85    19    83     2   100 0.78 Protein of unknown function, DUF258
AAA_22               PF13401.1    131 sp|Q5HM28|ECFA2_STAEQ -            286   2.2e-05   24.6   0.4   1   1   9.1e-07   0.00035   20.7   0.4     5   122    34   202    30   208 0.63 AAA domain
AAA_15               PF13175.1    415 sp|Q5HM28|ECFA2_STAEQ -            286   8.4e-05   21.7  10.4   1   2   7.8e-05     0.031   13.3   0.6    11    84    22   122    18   127 0.72 AAA ATPase domain
AAA_15               PF13175.1    415 sp|Q5HM28|ECFA2_STAEQ -            286   8.4e-05   21.7  10.4   2   2   2.2e-05    0.0086   15.1   0.7   372   411   166   205   126   206 0.92 AAA ATPase domain
AAA_18               PF13238.1    129 sp|Q5HM28|ECFA2_STAEQ -            286   0.00034   20.9   2.2   1   2   1.4e-05    0.0055   17.0   0.3     2    42    37    96    37   132 0.76 AAA domain
AAA_25               PF13481.1    194 sp|Q5HM28|ECFA2_STAEQ -            286    0.0015   17.9   0.0   1   2   0.00056      0.22   10.9   0.0    30    54    30    54    20    86 0.84 AAA domain
Zeta_toxin           PF06414.7    201 sp|Q5HM28|ECFA2_STAEQ -            286    0.0023   17.0   0.0   1   1   1.1e-05    0.0043   16.1   0.0    12    53    29    71    17   109 0.75 Zeta toxin
AAA_16               PF13191.1    185 sp|Q5HM28|ECFA2_STAEQ -            286     0.003   17.5   0.1   1   1   1.5e-05    0.0057   16.6   0.1    24    58    33    68    19   218 0.75 AAA ATPase domain
Dynamin_N            PF00350.18   168 sp|Q5HM28|ECFA2_STAEQ -            286    0.0033   17.2   2.1   1   1   2.1e-05    0.0081   15.9   2.1     2   144    37   211    37   223 0.75 Dynamin family
DUF87                PF01935.12   229 sp|Q5HM28|ECFA2_STAEQ -            286     0.004   17.0   0.2   1   1   4.1e-05     0.016   15.0   0.0    26    43    36    53    14    66 0.81 Domain of unknown function DUF87
AAA_17               PF13207.1    121 sp|Q5HM28|ECFA2_STAEQ -            286     0.004   17.9   0.0   1   1   2.3e-05     0.009   16.8   0.0     3    23    37    57    36   132 0.78 AAA domain
Miro                 PF08477.8    119 sp|Q5HM28|ECFA2_STAEQ -            286    0.0068   16.9   0.2   1   1   9.5e-05     0.037   14.5   0.0     3    38    37    71    36   110 0.71 Miro-like protein
SbcCD_C              PF13558.1     90 sp|Q5HM28|ECFA2_STAEQ -            286    0.0068   16.2   0.0   1   1   0.00016     0.062   13.2   0.0    63    89   163   189   133   190 0.84 Putative exonuclease SbcCD, C subunit
RNA_helicase         PF00910.17   107 sp|Q5HM28|ECFA2_STAEQ -            286    0.0076   16.4   0.3   1   1    0.0001     0.039   14.1   0.0     3    64    38    99    36   128 0.69 RNA helicase
MobB                 PF03205.9    140 sp|Q5HM28|ECFA2_STAEQ -            286      0.01   15.5   0.1   1   1     6e-05     0.023   14.3   0.1     4    24    37    57    34    83 0.86 Molybdopterin guanine dinucleotide synthesis protein B
AAA_10               PF12846.2    304 sp|Q5HM28|ECFA2_STAEQ -            286     0.012   15.0   0.3   1   2   0.00018     0.072   12.5   0.1     4    21    36    53    33    73 0.85 AAA-like domain
AAA_5                PF07728.9    139 sp|Q5HM28|ECFA2_STAEQ -            286     0.013   15.1   0.1   1   1   0.00018     0.072   12.8   0.0     4    24    38    61    36    88 0.80 AAA domain (dynein-related subfamily)
NACHT                PF05729.7    166 sp|Q5HM28|ECFA2_STAEQ -            286     0.014   15.0   0.3   1   1   9.6e-05     0.037   13.6   0.1     3    25    36    58    34    63 0.86 NACHT domain
T2SE                 PF00437.15   272 sp|Q5HM28|ECFA2_STAEQ -            286     0.016   14.0   0.3   1   1   0.00024     0.094   11.6   0.1   130   159    35    66     4    90 0.72 Type II/IV secretion system protein
MMR_HSR1             PF01926.18   116 sp|Q5HM28|ECFA2_STAEQ -            286     0.017   15.0   2.5   1   1   0.00017     0.066   13.1   2.5     3    20    37    61    35   260 0.62 50S ribosome-binding GTPase
ResIII               PF04851.10   184 sp|Q5HM28|ECFA2_STAEQ -            286     0.024   14.4   1.3   1   1    0.0001      0.04   13.7   0.9     5    71    16    84    14   203 0.69 Type III restriction enzyme, res subunit
Arch_ATPase          PF01637.13   234 sp|Q5HM28|ECFA2_STAEQ -            286     0.027   14.1   0.3   1   1     7e-05     0.027   14.1   0.3     7    96    22   100    19   141 0.64 Archaeal ATPase
AAA_30               PF13604.1    196 sp|Q5HM28|ECFA2_STAEQ -            286     0.028   13.9   0.0   1   1   0.00016     0.061   12.8   0.0    13    59    29    76    21    90 0.74 AAA domain
Mg_chelatase         PF01078.16   207 sp|Q5HM28|ECFA2_STAEQ -            286     0.046   12.8   0.0   1   1   0.00021     0.082   12.0   0.0    26    61    37    72    21    88 0.77 Magnesium chelatase, subunit ChlI
KaiC                 PF06745.8    227 sp|Q5HM28|ECFA2_STAEQ -            286     0.057   12.5   0.5   1   1   0.00028      0.11   11.6   0.4    17   104    31   122    24   217 0.84 KaiC
AAA_14               PF13173.1    128 sp|Q5HM28|ECFA2_STAEQ -            286     0.063   13.1   0.5   1   1   0.00054      0.21   11.4   0.1     2    44    33    75    32   156 0.67 AAA domain
AAA_28               PF13521.1    163 sp|Q5HM28|ECFA2_STAEQ -            286     0.068   13.1   0.0   1   1   0.00027       0.1   12.5   0.0     2    23    36    60    35   106 0.77 AAA domain
Methyltransf_32      PF13679.1    141 sp|Q5HM28|ECFA2_STAEQ -            286     0.071   12.7   0.0   1   1   0.00028      0.11   12.1   0.0    28    77    38    88    19   160 0.79 Methyltransferase domain
FtsK_SpoIIIE         PF01580.13   205 sp|Q5HM28|ECFA2_STAEQ -            286     0.079   12.4   0.0   1   1   0.00036      0.14   11.6   0.0    35    58    30    53    11    60 0.72 FtsK/SpoIIIE family
DEAD                 PF00270.24   169 sp|Q5HM28|ECFA2_STAEQ -            286     0.097   12.1   0.7   1   1   0.00059      0.23   10.9   0.7     9   109    27   227    16   243 0.73 DEAD/DEAH box helicase
NTPase_1             PF03266.10   168 sp|Q5HM28|ECFA2_STAEQ -            286       0.2   11.3   3.0   1   1   0.00047      0.18   11.4   0.2     3    36    37    72    35   129 0.80 NTPase
Peptidase_C47        PF05543.8    175 sp|Q5HKF6|ECPA_STAEQ -            395    1e-105  350.7   7.4   1   1  5.4e-109    2e-105  349.7   7.4     1   175   221   395   221   395 0.99 Staphopain peptidase C47
Staphopain_pro       PF14731.1    169 sp|Q5HKF6|ECPA_STAEQ -            395   6.5e-82  273.3  15.5   1   1   3.1e-85   1.2e-81  272.5  15.5     1   169    42   210    42   210 0.99 Staphopain proregion
DUF4384              PF14326.1     83 sp|Q5HKF6|ECPA_STAEQ -            395      0.14   12.0   1.3   2   2   0.00013      0.48   10.2   0.1    15    64   159   205   151   212 0.81 Domain of unknown function (DUF4384)
DUF4252              PF14060.1    155 sp|Q5HKF6|ECPA_STAEQ -            395      0.85    9.1   7.4   1   3   0.00019      0.72    9.3   0.1     5    45     7    51     3    54 0.77 Domain of unknown function (DUF4252)
GTP_EFTU             PF00009.22   188 sp|Q5HRK5|EFG_STAEQ  -            693   9.6e-66  220.8   0.5   1   1     1e-68   1.6e-65  220.0   0.5     1   188     8   280     8   280 0.94 Elongation factor Tu GTP binding domain
EFG_IV               PF03764.13   120 sp|Q5HRK5|EFG_STAEQ  -            693     3e-44  149.4   0.0   1   1   4.1e-47   6.8e-44  148.2   0.0     1   119   478   596   478   597 0.98 Elongation factor G, domain IV
EFG_II               PF14492.1     75 sp|Q5HRK5|EFG_STAEQ  -            693   5.1e-34  115.9   0.2   1   1   8.1e-37   1.3e-33  114.6   0.2     1    74   403   476   403   477 0.99 Elongation Factor G, domain II
EFG_C                PF00679.19    89 sp|Q5HRK5|EFG_STAEQ  -            693   1.4e-31  108.2   0.2   1   1   2.3e-34   3.7e-31  106.8   0.2     1    88   599   685   599   686 0.98 Elongation factor G C-terminus
GTP_EFTU_D2          PF03144.20    74 sp|Q5HRK5|EFG_STAEQ  -            693   2.6e-13   49.8   0.0   1   1   5.6e-16   9.2e-13   48.1   0.0     1    74   323   390   323   390 0.96 Elongation factor Tu domain 2
MMR_HSR1             PF01926.18   116 sp|Q5HRK5|EFG_STAEQ  -            693   0.00023   21.1   0.0   1   1   2.8e-07   0.00045   20.1   0.0     3   116    14   136    12   136 0.68 50S ribosome-binding GTPase
AIG1                 PF04548.11   212 sp|Q5HRK5|EFG_STAEQ  -            693    0.0012   17.9   0.0   1   1   1.4e-06    0.0023   17.0   0.0    31    68    57    94    15   105 0.87 AIG1 family
Miro                 PF08477.8    119 sp|Q5HRK5|EFG_STAEQ  -            693     0.066   13.7   0.0   1   1   9.7e-05      0.16   12.4   0.0     9   119    20   138    12   138 0.78 Miro-like protein
FeoB_N               PF02421.13   156 sp|Q5HRK5|EFG_STAEQ  -            693     0.092   12.0   0.0   1   1   0.00028      0.46    9.7   0.0    32   135    60   156    58   164 0.71 Ferrous iron transport protein B
EFP_N                PF08207.7     58 sp|Q5HP20|EFP_STAEQ  -            185   4.2e-29  100.1   0.3   1   1   1.9e-32   7.2e-29   99.4   0.3     1    58     3    60     3    60 0.99 Elongation factor P (EF-P) KOW-like domain
Elong-fact-P_C       PF09285.6     56 sp|Q5HP20|EFP_STAEQ  -            185   4.2e-26   90.0   1.2   2   2   3.3e-29   1.2e-25   88.5   0.7     1    56   129   184   129   184 0.99 Elongation factor P, C-terminal
EFP                  PF01132.15    55 sp|Q5HP20|EFP_STAEQ  -            185     6e-23   80.2   3.8   1   2     2e-26   7.6e-23   79.9   2.7     2    55    68   121    67   121 0.98 Elongation factor P (EF-P) OB domain
SMC_Nse1             PF07574.8    200 sp|Q5HP20|EFP_STAEQ  -            185     0.072   12.7   0.1   1   1   2.5e-05     0.093   12.3   0.1    55   116    58   118    37   139 0.84 Nse1 non-SMC component of SMC5-6 complex
EF_TS                PF00889.14   221 sp|Q5HPT4|EFTS_STAEQ -            292     9e-81  270.4   8.5   1   1   4.7e-84   1.2e-80  270.0   8.5     1   221    56   274    56   274 0.99 Elongation factor TS
UBA                  PF00627.26    37 sp|Q5HPT4|EFTS_STAEQ -            292   2.4e-12   46.2   0.0   1   1   3.1e-15   7.6e-12   44.6   0.0     1    37     3    40     3    40 0.97 UBA/TS-N domain
HBS1_N               PF08938.5     79 sp|Q5HPT4|EFTS_STAEQ -            292   0.00086   19.3   1.1   1   3     1e-05     0.025   14.6   0.1    46    79    19    52     5    52 0.80 HBS1 N-terminus
GerA                 PF03323.8    470 sp|Q5HPT4|EFTS_STAEQ -            292     0.076   11.1   0.1   2   2   3.1e-05     0.076   11.1   0.1   174   239   166   231   160   232 0.95 Bacillus/Clostridium GerA spore germination protein
DUF3150              PF11348.3    257 sp|Q5HPT4|EFTS_STAEQ -            292      0.46    9.5   5.7   1   3   0.00015      0.38    9.8   0.5   146   210    72   137    26   142 0.86 Protein of unknown function (DUF3150)
GTP_EFTU             PF00009.22   188 sp|Q5HRK4|EFTU_STAEQ -            394   6.1e-62  208.4   0.3   1   1   5.2e-65   8.6e-62  207.9   0.3     1   188    10   202    10   202 0.95 Elongation factor Tu GTP binding domain
GTP_EFTU_D3          PF03143.12    99 sp|Q5HRK4|EFTU_STAEQ -            394   1.4e-35  121.3   0.4   2   2   5.2e-38   8.5e-35  118.8   0.1     1    98   298   392   298   393 0.98 Elongation factor Tu C-terminal domain
GTP_EFTU_D2          PF03144.20    74 sp|Q5HRK4|EFTU_STAEQ -            394   1.1e-18   67.1   2.7   1   1   1.9e-21   3.2e-18   65.6   2.6     1    74   225   294   225   294 0.95 Elongation factor Tu domain 2
MMR_HSR1             PF01926.18   116 sp|Q5HRK4|EFTU_STAEQ -            394   6.1e-05   22.9   0.0   1   1   7.6e-08   0.00012   21.9   0.0     2   113    15   133    14   145 0.67 50S ribosome-binding GTPase
MobB                 PF03205.9    140 sp|Q5HRK4|EFTU_STAEQ -            394     0.014   15.1   0.2   1   1   3.5e-05     0.058   13.1   0.0     4    33    16    45    14    58 0.89 Molybdopterin guanine dinucleotide synthesis protein B
Miro                 PF08477.8    119 sp|Q5HRK4|EFTU_STAEQ -            394     0.016   15.7   0.0   1   1   1.7e-05     0.028   14.9   0.0     3    86    16   111    14   139 0.87 Miro-like protein
cobW                 PF02492.14   178 sp|Q5HRK4|EFTU_STAEQ -            394      0.04   13.3   0.2   1   1   6.2e-05       0.1   12.0   0.0   105   172    90   159    79   163 0.76 CobW/HypB/UreG, nucleotide-binding domain
CbiA                 PF01656.18   195 sp|Q5HRK4|EFTU_STAEQ -            394     0.056   12.8   0.1   1   1   0.00012      0.19   11.0   0.1    11    31    24    44    16    52 0.92 CobQ/CobB/MinD/ParA nucleotide binding domain
AAA_29               PF13555.1     62 sp|Q5HRK4|EFTU_STAEQ -            394       0.1   12.1   0.1   1   1   0.00014      0.23   10.9   0.1    19    51     8    40     1    47 0.77 P-loop containing region of AAA domain
AP_endonuc_2         PF01261.19   213 sp|Q5HNZ1|END4_STAEQ -            296   2.5e-35  121.7   0.8   1   1   3.9e-39   2.9e-35  121.4   0.8     2   213    20   236    19   236 0.94 Xylose isomerase-like TIM barrel
BAR_3_WASP_bdg       PF10456.4    237 sp|Q5HNZ1|END4_STAEQ -            296     0.065   12.4   0.0   1   1   1.7e-05      0.13   11.5   0.0    88   171   128   224   108   233 0.68 WASP-binding domain of Sorting nexin protein
MMR_HSR1             PF01926.18   116 sp|Q5HNN0|ENGB_STAEQ -            195   2.8e-21   75.6   0.0   1   1   4.6e-24   4.6e-21   74.9   0.0     1   116    27   145    27   145 0.89 50S ribosome-binding GTPase
FeoB_N               PF02421.13   156 sp|Q5HNN0|ENGB_STAEQ -            195   1.1e-09   37.6   0.2   1   1   1.4e-12   1.4e-09   37.4   0.2     2   151    27   186    26   191 0.78 Ferrous iron transport protein B
DUF258               PF03193.11   161 sp|Q5HNN0|ENGB_STAEQ -            195   2.2e-06   26.9   0.0   1   1   3.7e-09   3.6e-06   26.2   0.0    38   117    28   101    12   109 0.85 Protein of unknown function, DUF258
Dynamin_N            PF00350.18   168 sp|Q5HNN0|ENGB_STAEQ -            195   2.6e-06   27.3   1.7   1   2   3.7e-05     0.037   13.8   0.2     1    26    28    53    28    65 0.83 Dynamin family
Dynamin_N            PF00350.18   168 sp|Q5HNN0|ENGB_STAEQ -            195   2.6e-06   27.3   1.7   2   2   6.7e-05     0.066   13.0   0.0    97   167    67   145    49   146 0.64 Dynamin family
Miro                 PF08477.8    119 sp|Q5HNN0|ENGB_STAEQ -            195     3e-06   27.7   0.0   1   1   5.9e-09   5.8e-06   26.7   0.0     2   119    28   147    27   147 0.70 Miro-like protein
AIG1                 PF04548.11   212 sp|Q5HNN0|ENGB_STAEQ -            195   8.2e-05   21.8   0.2   1   1     1e-07    0.0001   21.4   0.2     3   139    28   159    26   186 0.71 AIG1 family
GTP_EFTU             PF00009.22   188 sp|Q5HNN0|ENGB_STAEQ -            195   9.3e-05   21.9   0.5   1   1   4.3e-06    0.0042   16.5   0.5    54   185    60   194    24   195 0.64 Elongation factor Tu GTP binding domain
Septin               PF00735.13   281 sp|Q5HNN0|ENGB_STAEQ -            195    0.0025   16.8   2.0   1   2   3.2e-06    0.0031   16.5   0.2     8    78    29    99    24   129 0.63 Septin
IIGP                 PF05049.8    376 sp|Q5HNN0|ENGB_STAEQ -            195    0.0032   16.3   0.5   1   2   1.4e-05     0.014   14.2   0.1    13    69     4    59     1   112 0.75 Interferon-inducible GTPase (IIGP)
RNA_helicase         PF00910.17   107 sp|Q5HNN0|ENGB_STAEQ -            195     0.011   15.8   0.1   1   1   3.6e-05     0.036   14.2   0.1     2    97    29   136    28   145 0.66 RNA helicase
Abhydrolase_6        PF12697.2    228 sp|Q5HNN0|ENGB_STAEQ -            195     0.012   15.5   0.0   1   1   1.4e-05     0.014   15.2   0.0   128   202    67   165    25   169 0.59 Alpha/beta hydrolase family
ABC_tran             PF00005.22   137 sp|Q5HNN0|ENGB_STAEQ -            195     0.027   14.7   0.4   1   1   6.5e-05     0.064   13.5   0.4    14    96    28   139    25   182 0.55 ABC transporter
AAA_29               PF13555.1     62 sp|Q5HNN0|ENGB_STAEQ -            195      0.03   13.8   0.1   1   1   5.8e-05     0.057   12.9   0.1    25    43    27    45    15    47 0.84 P-loop containing region of AAA domain
USP7_ICP0_bdg        PF12436.3    249 sp|Q5HNN0|ENGB_STAEQ -            195     0.035   13.3   1.0   1   1   4.5e-05     0.045   12.9   1.0    62   130   119   187    85   194 0.79 ICP0-binding domain of Ubiquitin-specific protease 7
cobW                 PF02492.14   178 sp|Q5HNN0|ENGB_STAEQ -            195     0.073   12.5   0.5   2   2   0.00037      0.36   10.2   0.1   104   168    95   163    61   169 0.77 CobW/HypB/UreG, nucleotide-binding domain
Enolase_C            PF00113.17   296 sp|Q5HQV0|ENO_STAEQ  -            434  9.4e-129  428.5   0.3   1   1  3.2e-132  1.2e-128  428.2   0.3     3   293   143   429   141   432 0.96 Enolase, C-terminal TIM barrel domain
Enolase_N            PF03952.11   132 sp|Q5HQV0|ENO_STAEQ  -            434   1.6e-60  202.7   0.1   1   1   8.5e-64   3.2e-60  201.8   0.1     2   132     4   136     3   136 0.97 Enolase, N-terminal domain
MAAL_C               PF07476.6    249 sp|Q5HQV0|ENO_STAEQ  -            434   3.8e-06   26.0   0.8   2   2   3.4e-09   1.2e-05   24.3   0.3   110   221   290   393   266   397 0.78 Methylaspartate ammonia-lyase C-terminus
MR_MLE_C             PF13378.1    111 sp|Q5HQV0|ENO_STAEQ  -            434    0.0086   16.0   0.0   1   1   6.5e-06     0.024   14.5   0.0    14    72   332   392   322   425 0.71 Enolase C-terminal domain-like
MMR_HSR1             PF01926.18   116 sp|Q5HNY0|ERA_STAEQ  -            299   1.8e-23   82.7   0.3   1   1   2.9e-26   2.9e-23   82.0   0.3     2   116     9   123     8   123 0.87 50S ribosome-binding GTPase
KH_2                 PF07650.12    78 sp|Q5HNY0|ERA_STAEQ  -            299   2.4e-21   75.0   3.3   1   1   4.9e-24   4.8e-21   74.1   3.3     1    78   206   283   206   283 0.94 KH domain
GTP_EFTU             PF00009.22   188 sp|Q5HNY0|ERA_STAEQ  -            299   3.2e-13   49.5   1.9   1   1     9e-15   8.9e-12   44.8   0.5     7   187    10   171     4   172 0.74 Elongation factor Tu GTP binding domain
FeoB_N               PF02421.13   156 sp|Q5HNY0|ERA_STAEQ  -            299   2.1e-12   46.5   0.3   1   1   3.5e-15   3.5e-12   45.8   0.3     3   154     9   164     8   166 0.82 Ferrous iron transport protein B
Dynamin_N            PF00350.18   168 sp|Q5HNY0|ERA_STAEQ  -            299   3.6e-11   43.1   0.5   1   2   3.4e-06    0.0034   17.2   0.1     1    34     9    43     9    53 0.85 Dynamin family
Dynamin_N            PF00350.18   168 sp|Q5HNY0|ERA_STAEQ  -            299   3.6e-11   43.1   0.5   2   2   2.2e-08   2.2e-05   24.3   0.1   100   167    53   123    44   124 0.81 Dynamin family
AIG1                 PF04548.11   212 sp|Q5HNY0|ERA_STAEQ  -            299   5.3e-08   32.2   0.1   1   1   9.7e-11   9.6e-08   31.3   0.1     5   110    11   113     9   144 0.83 AIG1 family
Miro                 PF08477.8    119 sp|Q5HNY0|ERA_STAEQ  -            299   1.6e-07   31.8   0.2   1   1   3.9e-10   3.9e-07   30.5   0.2     2   119     9   125     9   125 0.71 Miro-like protein
PduV-EutP            PF10662.4    143 sp|Q5HNY0|ERA_STAEQ  -            299   4.4e-05   22.9   0.2   1   1   8.7e-08   8.6e-05   22.0   0.2     6   142    11   167     7   168 0.77 Ethanolamine utilisation - propanediol utilisation
Ras                  PF00071.17   162 sp|Q5HNY0|ERA_STAEQ  -            299    0.0004   19.7   0.0   1   1     8e-07   0.00079   18.8   0.0     4   154    11   164     9   170 0.79 Ras family
cobW                 PF02492.14   178 sp|Q5HNY0|ERA_STAEQ  -            299   0.00065   19.1   1.1   2   2   7.1e-06    0.0071   15.8   0.1    74   166    45   139    33   146 0.75 CobW/HypB/UreG, nucleotide-binding domain
DUF258               PF03193.11   161 sp|Q5HNY0|ERA_STAEQ  -            299   0.00085   18.5   0.1   1   1   1.5e-06    0.0015   17.7   0.1    37   103     8    70     2    92 0.70 Protein of unknown function, DUF258
AAA_22               PF13401.1    131 sp|Q5HNY0|ERA_STAEQ  -            299     0.079   13.0   0.0   1   1   0.00023      0.22   11.6   0.0     3    47     5    63     2    84 0.72 AAA domain
KH_4                 PF13083.1     73 sp|Q5HNY0|ERA_STAEQ  -            299      0.23   11.1   2.8   1   1   0.00052      0.52    9.9   2.2    18    52   213   252   196   252 0.60 KH domain
KH_1                 PF00013.24    60 sp|Q5HNY0|ERA_STAEQ  -            299       1.9    8.2   6.5   1   1   0.00027      0.27   10.9   1.1     3    24   231   253   229   257 0.84 KH domain
Exonuc_VII_L         PF02601.10   319 sp|Q5HP29|EX7L_STAEQ -            445   2.9e-84  282.9  10.6   1   1   1.5e-87   4.4e-84  282.3  10.6     1   319   123   437   123   437 0.96 Exonuclease VII, large subunit
tRNA_anti_2          PF13742.1     99 sp|Q5HP29|EX7L_STAEQ -            445   1.9e-28   98.1   0.1   1   1   2.1e-31   6.3e-28   96.5   0.1     2    98     5   100     4   101 0.98 OB-fold nucleic acid binding domain
tRNA_anti-codon      PF01336.20    75 sp|Q5HP29|EX7L_STAEQ -            445   1.5e-08   34.3   0.0   1   1   1.4e-11   4.1e-08   32.9   0.0     1    74    27   101    27   102 0.94 OB-fold nucleic acid binding domain
cIII                 PF08134.6     44 sp|Q5HP29|EX7L_STAEQ -            445     0.096   12.2   0.1   1   1   9.7e-05      0.29   10.7   0.1    19    38   274   293   269   297 0.89 cIII protein family
UvsY                 PF11056.3    129 sp|Q5HP29|EX7L_STAEQ -            445       4.2    7.5  12.9   1   2   0.00012      0.34   11.0   5.7    29   108   272   355   241   365 0.76 Recombination, repair and ssDNA binding protein UvsY
Exonuc_VII_S         PF02609.11    53 sp|Q5HP30|EX7S_STAEQ -             76     2e-21   75.5   4.8   1   1   1.3e-24   2.4e-21   75.2   4.8     1    53     8    60     8    60 0.99 Exonuclease VII small subunit
Nckap1               PF09735.4   1117 sp|Q5HP30|EX7S_STAEQ -             76    0.0062   14.0   2.0   1   1   3.2e-06    0.0059   14.1   2.0   599   660     8    72     1    76 0.72 Membrane-associated apoptosis protein
DUF1657              PF07870.6     50 sp|Q5HP30|EX7S_STAEQ -             76     0.026   14.1   0.6   1   1   1.4e-05     0.026   14.1   0.6    29    48     5    24     2    25 0.93 Protein of unknown function (DUF1657)
DUF148               PF02520.12   114 sp|Q5HP30|EX7S_STAEQ -             76     0.039   13.7   1.7   1   1   2.9e-05     0.053   13.3   1.7    43    95     2    64     1    67 0.91 Domain of unknown function DUF148
HR1                  PF02185.11    70 sp|Q5HP30|EX7S_STAEQ -             76     0.067   12.9   5.0   1   1   7.3e-05      0.14   11.9   5.0     2    55    14    63     2    63 0.88 Hr1 repeat
Octopine_DH          PF02317.12   152 sp|Q5HP30|EX7S_STAEQ -             76      0.07   12.7   0.5   1   1     4e-05     0.073   12.7   0.5    43   104     9    72     2    76 0.86 NAD/NADP octopine/nopaline dehydrogenase, alpha-helical domain
DMPK_coil            PF08826.5     61 sp|Q5HP30|EX7S_STAEQ -             76      0.13   12.1   7.0   2   2   0.00014      0.27   11.1   0.2    29    47    45    63    40    67 0.87 DMPK coiled coil domain like
EzrA                 PF06160.7    560 sp|Q5HNI8|EZRA_STAEQ -            564  4.4e-174  579.7  60.6   1   1  5.6e-177  5.2e-174  579.5  60.6     1   559     5   562     5   563 1.00 Septation ring formation regulator, EzrA
TarH                 PF02203.10   171 sp|Q5HNI8|EZRA_STAEQ -            564   7.4e-05   22.6   1.1   1   1     8e-08   7.4e-05   22.6   1.1    11   140     3   135     1   168 0.77 Tar ligand binding domain homologue
IncA                 PF04156.9    191 sp|Q5HNI8|EZRA_STAEQ -            564    0.0068   16.0  42.4   3   3    0.0006      0.56    9.7  13.4   102   188   324   417   251   420 0.87 IncA protein
COG2                 PF06148.6    133 sp|Q5HNI8|EZRA_STAEQ -            564    0.0087   15.9   0.7   5   7   9.4e-06    0.0087   15.9   0.7    56   122   250   322   245   333 0.86 COG (conserved oligomeric Golgi) complex component, COG2
SIT                  PF15330.1    107 sp|Q5HNI8|EZRA_STAEQ -            564     0.017   15.2   0.6   1   1   9.1e-05     0.084   13.0   0.1     2    73     2    71     1    94 0.77 SHP2-interacting transmembrane adaptor protein, SIT
AKNA                 PF12443.3    106 sp|Q5HNI8|EZRA_STAEQ -            564     0.063   13.2   0.1   1   1   6.8e-05     0.063   13.2   0.1    13    75   166   228   157   247 0.83 AT-hook-containing transcription factor
TPR_2                PF07719.12    34 sp|Q5HNI8|EZRA_STAEQ -            564      0.07   13.0   0.7   1   1   0.00053      0.49   10.4   0.2     6    29   524   547   522   549 0.92 Tetratricopeptide repeat
DUF2703              PF10865.3    120 sp|Q5HNI8|EZRA_STAEQ -            564     0.071   13.0   0.6   1   1    0.0004      0.37   10.7   0.1    10    78   437   508   429   516 0.86 Domain of unknown function (DUF2703)
Lectin_N             PF03954.9    138 sp|Q5HNI8|EZRA_STAEQ -            564     0.085   12.2   3.2   2   2   0.00038      0.35   10.2   1.4    50   138   392   488   348   488 0.81 Hepatic lectin, N-terminal domain
TPR_11               PF13414.1     69 sp|Q5HNI8|EZRA_STAEQ -            564      0.23   11.1   6.0   2   2   9.6e-05     0.089   12.4   0.5     8    31   524   547   518   552 0.91 TPR repeat
DUF4398              PF14346.1    103 sp|Q5HNI8|EZRA_STAEQ -            564      0.99    9.4   0.0   2   2    0.0011      0.99    9.4   0.0    47    74   521   548   517   560 0.89 Domain of unknown function (DUF4398)
A_deaminase_N        PF08451.6     96 sp|Q5HNI8|EZRA_STAEQ -            564       1.6    8.7   8.8   1   2   0.00026      0.24   11.4   0.6    17    89   381   455   357   457 0.88 Adenosine/AMP deaminase N-terminal
FBPase_2             PF06874.6    641 sp|Q5HLB1|F16PC_STAEQ -            654         0 1025.3  12.9   1   1         0         0 1025.1  12.9     2   638    12   651    11   654 0.98 Firmicute fructose-1,6-bisphosphatase
DUF2930              PF11152.3    195 sp|Q5HLB1|F16PC_STAEQ -            654      0.14   11.2   0.0   1   1   3.7e-05      0.27   10.3   0.0   104   145    59    98    55   111 0.82 Protein of unknown function (DUF2930)
adh_short            PF00106.20   167 sp|Q5HPW0|FABG_STAEQ -            244   2.1e-42  144.8   1.2   1   1   1.8e-45   2.7e-42  144.5   1.2     1   166     3   170     3   171 0.98 short chain dehydrogenase
adh_short_C2         PF13561.1    241 sp|Q5HPW0|FABG_STAEQ -            244     6e-35  121.1   1.7   1   1   4.8e-38   7.2e-35  120.8   1.7     5   240    11   242     9   243 0.92 Enoyl-(Acyl carrier protein) reductase
KR                   PF08659.5    181 sp|Q5HPW0|FABG_STAEQ -            244   1.9e-22   79.7   0.9   1   2   2.2e-25   3.3e-22   79.0   0.7     3   160     5   163     4   188 0.85 KR domain
Epimerase            PF01370.16   236 sp|Q5HPW0|FABG_STAEQ -            244   5.5e-05   22.7   0.4   1   1   5.2e-08   7.7e-05   22.2   0.4     1   102     5   121     5   180 0.84 NAD dependent epimerase/dehydratase family
DUF1776              PF08643.5    299 sp|Q5HPW0|FABG_STAEQ -            244    0.0017   17.5   0.0   2   2   3.5e-05     0.051   12.6   0.0   112   199    99   183    94   203 0.91 Fungal family of unknown function (DUF1776)
NAD_binding_2        PF03446.10   163 sp|Q5HPW0|FABG_STAEQ -            244     0.019   14.8   1.7   1   2   4.7e-05     0.069   12.9   0.4    12    97    14    91    10   110 0.75 NAD binding domain of 6-phosphogluconate dehydrogenase
NmrA                 PF05368.8    233 sp|Q5HPW0|FABG_STAEQ -            244     0.027   13.7   2.3   1   2   6.7e-05       0.1   11.8   1.0     2    69     6    78     5   100 0.79 NmrA-like family
Eno-Rase_NADH_b      PF12242.3     78 sp|Q5HPW0|FABG_STAEQ -            244     0.083   12.6   0.4   1   1   5.6e-05     0.083   12.6   0.4    40    71     3    32     2    39 0.73 NAD(P)H binding domain of trans-2-enoyl-CoA reductase
ACP_syn_III_C        PF08541.5     90 sp|Q5HQI2|FABH_STAEQ -            313   1.8e-37  127.2   1.0   2   2   2.3e-39   4.3e-36  122.8   0.0     2    90   223   311   222   311 0.99 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal
ACP_syn_III          PF08545.5     80 sp|Q5HQI2|FABH_STAEQ -            313   2.3e-29  100.8   0.5   1   1     3e-32   5.5e-29   99.6   0.5     2    80   107   184   106   184 0.94 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III
Chal_sti_synt_C      PF02797.10   151 sp|Q5HQI2|FABH_STAEQ -            313   9.9e-06   25.5   0.0   1   1   9.5e-09   1.8e-05   24.7   0.0    34   148   206   310   191   311 0.79 Chalcone and stilbene synthases, C-terminal domain
HMG_CoA_synt_N       PF01154.12   174 sp|Q5HQI2|FABH_STAEQ -            313   9.7e-05   21.9   0.7   1   1   8.7e-08   0.00016   21.2   0.7     4   167     2   166     1   171 0.83 Hydroxymethylglutaryl-coenzyme A synthase N terminal
FAE1_CUT1_RppA       PF08392.7    290 sp|Q5HQI2|FABH_STAEQ -            313   9.8e-05   21.5   0.0   1   2   2.4e-07   0.00045   19.3   0.0    75   211    43   174    33   182 0.80 FAE1/Type III polyketide synthase-like protein
Chal_sti_synt_N      PF00195.14   227 sp|Q5HQI2|FABH_STAEQ -            313   0.00054   19.2   0.0   1   1   5.5e-07     0.001   18.3   0.0    99   224    49   167    13   169 0.80 Chalcone and stilbene synthases, N-terminal domain
Thiolase_N           PF00108.18   264 sp|Q5HQI2|FABH_STAEQ -            313   0.00067   18.7   0.5   1   1   7.3e-07    0.0014   17.7   0.4    23   132    48   155    37   250 0.79 Thiolase, N-terminal domain
Thiolase_C           PF02803.13   123 sp|Q5HQI2|FABH_STAEQ -            313   0.00069   19.0   0.0   2   2   4.3e-05     0.079   12.3   0.0    27    71   217   261   209   278 0.88 Thiolase, C-terminal domain
FabA                 PF07977.8    138 sp|Q5HMC3|FABZ_STAEQ -            145   2.2e-41  140.5   0.0   1   1   6.7e-45   2.5e-41  140.4   0.0     1   137    14   136    14   137 0.97 FabA-like domain
MaoC_dehydratas      PF01575.14   123 sp|Q5HMC3|FABZ_STAEQ -            145   7.5e-05   22.1   0.0   1   1   2.7e-08   9.9e-05   21.7   0.0    51   104    62   115    51   131 0.84 MaoC like domain
4HBT                 PF03061.17    79 sp|Q5HMC3|FABZ_STAEQ -            145    0.0025   17.8   0.0   1   1     9e-07    0.0034   17.4   0.0    11    61    66   117    53   134 0.88 Thioesterase superfamily
Cystatin             PF00031.16    94 sp|Q5HMC3|FABZ_STAEQ -            145       0.1   12.7   0.0   1   1   4.6e-05      0.17   12.0   0.0    20    64    72   118    65   132 0.75 Cystatin domain
4HBT                 PF03061.17    79 sp|Q5HPW3|FAPR_STAEQ -            186   0.00063   19.8   0.0   1   1   3.9e-07   0.00097   19.2   0.0    14    73   102   168    97   173 0.85 Thioesterase superfamily
MaoC_dehydratas      PF01575.14   123 sp|Q5HPW3|FAPR_STAEQ -            186    0.0011   18.2   0.0   1   1   7.6e-07    0.0019   17.5   0.0    50   115   101   165    94   170 0.89 MaoC like domain
HTH_DeoR             PF08220.7     57 sp|Q5HPW3|FAPR_STAEQ -            186     0.003   17.0   0.1   1   1   3.2e-06    0.0079   15.7   0.1     4    39    11    46     8    70 0.77 DeoR-like helix-turn-helix domain
HTH_11               PF08279.7     55 sp|Q5HPW3|FAPR_STAEQ -            186     0.026   14.1   0.0   1   2   6.7e-05      0.17   11.5   0.0    11    33    17    39     8    46 0.82 HTH domain
ALS_ss_C             PF10369.4     75 sp|Q5HPW3|FAPR_STAEQ -            186      0.11   12.2   0.9   2   2   0.00018      0.44   10.3   0.1    26    43   147   164   125   171 0.80 Small subunit of acetolactate synthase
MaoC_dehydrat_N      PF13452.1    132 sp|Q5HPW3|FAPR_STAEQ -            186      0.12   12.1   0.0   1   1   6.9e-05      0.17   11.6   0.0    75   107   126   158   104   171 0.85 N-terminal half of MaoC dehydratase
FemAB                PF02388.11   406 sp|Q5HPG6|FEMA_STAEQ -            417  1.3e-150  501.6  12.6   1   1    5e-154  1.5e-150  501.4  12.6     1   406     6   414     6   414 1.00 FemAB family
Acetyltransf_6       PF13480.1    142 sp|Q5HPG6|FEMA_STAEQ -            417   0.00067   19.6   0.6   1   1   4.3e-07    0.0013   18.7   0.1    82   135   312   365   305   375 0.88 Acetyltransferase (GNAT) domain
AAA_23               PF13476.1    202 sp|Q5HPG6|FEMA_STAEQ -            417     0.012   16.0   5.1   1   1   5.5e-06     0.016   15.5   5.1    90   198   178   301    42   307 0.58 AAA domain
DUF3269              PF11673.3     73 sp|Q5HPG6|FEMA_STAEQ -            417      0.28   11.6   7.4   1   2   8.9e-05      0.26   11.7   0.4    30    62     4    36     1    43 0.88 Protein of unknown function (DUF3269)
YlqD                 PF11068.3    131 sp|Q5HPG6|FEMA_STAEQ -            417      0.52   10.3   5.6   1   1   0.00033      0.98    9.4   5.6    24    81   244   306   240   312 0.88 YlqD protein
FemAB                PF02388.11   406 sp|Q5HPG5|FEMB_STAEQ -            417  4.3e-136  453.8   7.4   1   1    2e-139    5e-136  453.5   7.4     1   405     6   409     6   410 0.98 FemAB family
Acetyltransf_6       PF13480.1    142 sp|Q5HPG5|FEMB_STAEQ -            417   1.8e-07   31.2   0.2   3   3   6.4e-07    0.0016   18.4   0.0    71   136   294   364   260   380 0.75 Acetyltransferase (GNAT) domain
HOOK                 PF05622.7    713 sp|Q5HPG5|FEMB_STAEQ -            417     0.011   13.6   5.7   1   1   6.4e-06     0.016   13.0   5.7   514   567   244   298   240   312 0.81 HOOK protein
Fib_alpha            PF08702.5    146 sp|Q5HPG5|FEMB_STAEQ -            417      0.12   12.5   2.4   1   1   9.6e-05      0.24   11.5   2.4    55   107   244   294   240   314 0.74 Fibrinogen alpha/beta chain family
ABC_sub_bind         PF04392.7    294 sp|Q5HPG5|FEMB_STAEQ -            417      0.39    9.6   3.3   2   2   0.00033      0.82    8.5   1.9    12    63   243   294   234   297 0.91 ABC transporter substrate binding protein
FemAB                PF02388.11   406 sp|Q5HLY6|FEMX_STAEQ -            416  6.8e-107  357.6   2.8   1   1  2.8e-110  8.3e-107  357.3   2.8     1   405     6   399     6   400 0.97 FemAB family
Acetyltransf_6       PF13480.1    142 sp|Q5HLY6|FEMX_STAEQ -            416   4.2e-12   46.2   0.7   1   2   0.00014      0.41   10.5   0.1     5    83   165   238   161   238 0.76 Acetyltransferase (GNAT) domain
Acetyltransf_6       PF13480.1    142 sp|Q5HLY6|FEMX_STAEQ -            416   4.2e-12   46.2   0.7   2   2   8.9e-12   2.6e-08   33.9   0.1    80   139   296   355   281   368 0.91 Acetyltransferase (GNAT) domain
DUF607               PF04678.8    180 sp|Q5HLY6|FEMX_STAEQ -            416     0.016   15.1   0.0   1   1   1.2e-05     0.035   14.0   0.0    31   103   231   306   203   310 0.87 Protein of unknown function, DUF607
AAA_23               PF13476.1    202 sp|Q5HLY6|FEMX_STAEQ -            416     0.024   14.9   8.4   1   1   1.4e-05     0.041   14.2   8.4    69   199    98   281    53   292 0.50 AAA domain
Peptidase_U57        PF05582.7    287 sp|Q5HLY6|FEMX_STAEQ -            416     0.081   11.8   0.3   1   1   4.7e-05      0.14   11.1   0.3    19   118   215   313   201   325 0.85 YabG peptidase U57
Formyl_trans_N       PF00551.14   181 sp|Q5HPX5|FMT_STAEQ  -            310   2.5e-42  144.4   0.1   1   1   4.6e-46   3.4e-42  144.0   0.1     2   177     3   176     2   180 0.96 Formyl transferase
Formyl_trans_C       PF02911.13   100 sp|Q5HPX5|FMT_STAEQ  -            310   5.8e-32  109.7   0.0   1   1   1.3e-35   9.3e-32  109.0   0.0     2    99   204   300   203   301 0.96 Formyl transferase, C-terminal domain
FolB                 PF02152.13   113 sp|Q5HRN9|FOLB_STAEQ -            121   3.4e-31  107.7   0.0   1   1   2.6e-35   3.8e-31  107.5   0.0     1   113     5   118     5   118 0.99 Dihydroneopterin aldolase
THF_DHG_CYH_C        PF02882.14   161 sp|Q5HQA7|FOLD_STAEQ -            286     4e-67  224.2   2.8   1   1   1.4e-70   5.4e-67  223.8   2.8     1   158   123   279   123   282 0.98 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain
THF_DHG_CYH          PF00763.18   117 sp|Q5HQA7|FOLD_STAEQ -            286   1.6e-43  147.4   2.6   1   1   4.2e-47   1.6e-43  147.4   2.6     1   117     4   120     4   120 0.99 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain
Shikimate_DH         PF01488.15   135 sp|Q5HQA7|FOLD_STAEQ -            286     0.034   14.2   0.8   2   2   2.5e-05     0.094   12.8   0.1    40   110   162   231   147   250 0.70 Shikimate / quinate 5-dehydrogenase
DUF1884              PF08967.5     85 sp|Q5HQA7|FOLD_STAEQ -            286     0.047   13.7   0.5   1   2    0.0001      0.38   10.8   0.1    11    44    16    55     6    83 0.68 Domain of unknown function (DUF1884)
Glyoxalase           PF00903.20   128 sp|Q5HKJ6|FOSB_STAEQ -            142   4.7e-14   52.4   0.0   1   1   1.2e-17     6e-14   52.1   0.0     2   128     6   117     5   117 0.92 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily
Glyoxalase_2         PF12681.2    108 sp|Q5HKJ6|FOSB_STAEQ -            142   1.3e-12   48.2   0.0   1   1   3.5e-16   1.7e-12   47.8   0.0     2   107    12   117    11   118 0.79 Glyoxalase-like domain
Glyoxalase_4         PF13669.1    109 sp|Q5HKJ6|FOSB_STAEQ -            142   0.00071   19.5   0.0   1   1   1.9e-05     0.092   12.7   0.0     2   109     8   107     7   107 0.72 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily
FTHFS                PF01268.14   557 sp|Q5HNH4|FTHS_STAEQ -            555  8.1e-264  875.7   4.2   1   1  1.3e-267  9.3e-264  875.5   4.2     3   557     5   555     3   555 0.99 Formate--tetrahydrofolate ligase
CbiA                 PF01656.18   195 sp|Q5HNH4|FTHS_STAEQ -            555     0.066   12.6   0.3   1   2   3.7e-05      0.28   10.5   0.1     9    32    68    91    65    92 0.92 CobQ/CobB/MinD/ParA nucleotide binding domain
Ferritin             PF00210.19   142 sp|Q5HN41|FTN_STAEQ  -            166   3.6e-39  133.7   5.8   1   1   5.7e-43   4.2e-39  133.5   5.8     2   142     8   144     7   144 0.94 Ferritin-like domain
DUF2075              PF09848.4    352 sp|Q5HN41|FTN_STAEQ  -            166   0.00084   18.4   0.2   1   1   1.3e-07   0.00099   18.1   0.2   140   212    85   157    44   164 0.86 Uncharacterized conserved protein (DUF2075)
FtsA                 PF14450.1    120 sp|Q5HQ07|FTSA_STAEQ -            464   9.6e-37  125.4   3.9   1   2     2e-18   4.2e-15   55.6   1.7     2    98     7   181     6   192 0.96 Cell division protein FtsA
FtsA                 PF14450.1    120 sp|Q5HQ07|FTSA_STAEQ -            464   9.6e-37  125.4   3.9   2   2   6.5e-23   1.4e-19   70.1   0.0     2   119   203   364   202   365 0.98 Cell division protein FtsA
MreB_Mbl             PF06723.8    327 sp|Q5HQ07|FTSA_STAEQ -            464   1.4e-15   56.7   2.0   1   2   0.00018      0.37    9.3   0.0    61   107    39    85     7    93 0.87 MreB/Mbl protein
MreB_Mbl             PF06723.8    327 sp|Q5HQ07|FTSA_STAEQ -            464   1.4e-15   56.7   2.0   2   2   7.7e-16   1.6e-12   46.6   0.7   140   304   195   347   152   356 0.89 MreB/Mbl protein
SHS2_FTSA            PF02491.15    80 sp|Q5HQ07|FTSA_STAEQ -            464   4.5e-15   55.2   1.3   1   1   5.7e-18   1.2e-14   53.9   1.3     3    79    82   159    80   160 0.92 SHS2 domain inserted in FTSA
PilM_2               PF11104.3    340 sp|Q5HQ07|FTSA_STAEQ -            464   1.1e-07   31.1   3.1   2   2     9e-10   1.9e-06   27.0   0.2   122   311   149   352   133   370 0.85 Type IV pilus assembly protein PilM;
BcrAD_BadFG          PF01869.15   271 sp|Q5HQ07|FTSA_STAEQ -            464     0.013   14.8   4.7   1   1   0.00021      0.44    9.8   4.7     3   249     9   345     7   353 0.67 BadF/BadG/BcrA/BcrD ATPase family
BDM                  PF10684.4     92 sp|Q5HQ07|FTSA_STAEQ -            464     0.064   13.4   0.3   1   1   0.00013      0.27   11.4   0.0    42    83   148   189   111   196 0.82 Putative biofilm-dependent modulation protein
MutL                 PF13941.1    457 sp|Q5HQ07|FTSA_STAEQ -            464       0.1   10.9   0.1   1   1    0.0001      0.21    9.8   0.1     2    60     6    64     5    75 0.86 MutL protein
FtsK_SpoIIIE         PF01580.13   205 sp|Q5HPR5|FTSK_STAEQ -            797   5.9e-64  215.3   0.0   1   1   1.2e-66   1.1e-63  214.4   0.0    17   205   451   632   439   632 0.96 FtsK/SpoIIIE family
Ftsk_gamma           PF09397.5     67 sp|Q5HPR5|FTSK_STAEQ -            797   7.5e-28   96.0   0.1   2   2   8.6e-31   7.5e-28   96.0   0.1     3    65   729   791   727   793 0.96 Ftsk gamma domain
AAA_10               PF12846.2    304 sp|Q5HPR5|FTSK_STAEQ -            797   8.7e-10   38.5   0.4   1   2   3.3e-05     0.029   13.8   0.0     2    38   473   513   472   518 0.85 AAA-like domain
AAA_10               PF12846.2    304 sp|Q5HPR5|FTSK_STAEQ -            797   8.7e-10   38.5   0.4   2   2   7.1e-08   6.2e-05   22.5   0.1   214   294   572   658   534   663 0.82 AAA-like domain
DUF87                PF01935.12   229 sp|Q5HPR5|FTSK_STAEQ -            797   4.4e-05   23.4   0.2   1   2   5.1e-08   4.4e-05   23.4   0.2     4    61   457   513   453   621 0.66 Domain of unknown function DUF87
DUF4117              PF13491.1    171 sp|Q5HPR5|FTSK_STAEQ -            797    0.0001   21.7   8.6   1   1   1.2e-06     0.001   18.5   8.6    47   162    47   180    46   188 0.83 Domain of unknown function (DUF4117)
Arch_ATPase          PF01637.13   234 sp|Q5HPR5|FTSK_STAEQ -            797   0.00021   21.0   5.2   2   2   2.7e-06    0.0023   17.6   0.0    21   149   473   614   466   632 0.75 Archaeal ATPase
AAA_22               PF13401.1    131 sp|Q5HPR5|FTSK_STAEQ -            797    0.0012   19.0   0.0   1   1   3.8e-06    0.0033   17.5   0.0     6   123   474   627   469   634 0.72 AAA domain
TrwB_AAD_bind        PF10412.4    386 sp|Q5HPR5|FTSK_STAEQ -            797    0.0065   15.1   1.2   1   1   1.5e-05     0.013   14.1   0.0    13    40   470   497   459   522 0.87 Type IV secretion-system coupling protein DNA-binding domain
T2SE                 PF00437.15   272 sp|Q5HPR5|FTSK_STAEQ -            797    0.0077   15.1   0.0   1   1   2.3e-05      0.02   13.7   0.0   129   152   473   496   344   524 0.86 Type II/IV secretion system protein
Hid1                 PF12722.2    895 sp|Q5HPR5|FTSK_STAEQ -            797    0.0093   13.7  13.1   1   1   1.7e-05     0.015   13.0  13.1   587   723   179   317   149   333 0.66 High-temperature-induced dauer-formation protein
Peptidase_S49_N      PF08496.5    155 sp|Q5HPR5|FTSK_STAEQ -            797      0.01   15.6   2.6   2   2   1.2e-05      0.01   15.6   2.6    11    92   155   236   144   248 0.39 Peptidase family S49 N-terminal
AAA                  PF00004.24   132 sp|Q5HPR5|FTSK_STAEQ -            797     0.028   14.6   0.0   1   1   8.4e-05     0.073   13.2   0.0     1   112   475   630   475   649 0.80 ATPase family associated with various cellular activities (AAA)
AAA_29               PF13555.1     62 sp|Q5HPR5|FTSK_STAEQ -            797     0.036   13.6   0.0   1   1    0.0001     0.088   12.3   0.0    24    45   473   494   461   504 0.77 P-loop containing region of AAA domain
DUF1673              PF07895.6    205 sp|Q5HPR5|FTSK_STAEQ -            797     0.075   12.5   6.6   1   2   0.00032      0.28   10.7   1.4   121   177    29    86     4   111 0.79 Protein of unknown function (DUF1673)
DUF373               PF04123.8    344 sp|Q5HPR5|FTSK_STAEQ -            797      0.74    8.7   8.4   1   2   9.7e-05     0.085   11.8   1.1   254   319    23    90    11   118 0.71 Domain of unknown function (DUF373)
Tubulin              PF00091.20   216 sp|Q5HQ06|FTSZ_STAEQ -            394   2.3e-40  138.7   2.0   1   1   6.2e-44   2.3e-40  138.7   2.0     2   216    14   185    13   185 0.97 Tubulin/FtsZ family, GTPase domain
FtsZ_C               PF12327.3     95 sp|Q5HQ06|FTSZ_STAEQ -            394   5.2e-34  116.1   3.0   2   2   1.4e-37   5.2e-34  116.1   3.0     1    95   222   316   222   316 0.99 FtsZ family, C-terminal domain
Lyase_1              PF00206.15   312 sp|Q5HN85|FUMC_STAEQ -            461  8.8e-113  376.5   0.1   1   1  3.3e-116  1.2e-112  376.1   0.1     1   312    11   340    11   340 0.97 Lyase
FumaraseC_C          PF10415.4     55 sp|Q5HN85|FUMC_STAEQ -            461   8.2e-27   93.0   0.0   1   1   4.8e-30   1.8e-26   91.9   0.0     1    55   406   460   406   460 0.98 Fumarase C C-terminus
AIP3                 PF03915.8    424 sp|Q5HN85|FUMC_STAEQ -            461      0.05   12.5   0.2   1   1   2.2e-05      0.08   11.8   0.2   121   220   119   222    67   224 0.74 Actin interacting protein 3
G-alpha              PF00503.15   389 sp|Q5HN85|FUMC_STAEQ -            461     0.061   12.0   0.4   2   2   6.3e-05      0.23   10.0   0.0    86   142   353   399   340   450 0.77 G-protein alpha subunit
FUR                  PF01475.14   120 sp|Q5HNZ4|FUR_STAEQ  -            139   1.1e-35  122.1   1.9   1   1   5.8e-39   1.4e-35  121.7   1.9     1   120    12   128    12   128 0.98 Ferric uptake regulator family
Baculo_p26           PF04766.7    234 sp|Q5HNZ4|FUR_STAEQ  -            139     0.059   12.6   0.3   1   1   3.6e-05      0.09   12.0   0.3    26    89    25    91     2    93 0.78 Nucleopolyhedrovirus p26 protein
HTH_20               PF12840.2     61 sp|Q5HNZ4|FUR_STAEQ  -            139     0.097   12.4   0.0   1   1    0.0001      0.25   11.1   0.0    12    57    21    72    19    74 0.89 Helix-turn-helix domain
Gp_dh_C              PF02800.15   157 sp|Q5HQV4|G3P1_STAEQ -            336   6.7e-60  201.0   0.2   1   1   2.8e-63   1.1e-59  200.4   0.2     1   157   156   314   156   314 0.98 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain
Gp_dh_N              PF00044.19   151 sp|Q5HQV4|G3P1_STAEQ -            336   3.2e-54  183.0   0.0   1   1     2e-57   7.4e-54  181.8   0.0     1   151     3   151     3   151 0.99 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain
DapB_N               PF01113.15   124 sp|Q5HQV4|G3P1_STAEQ -            336     0.003   17.4   1.1   1   2     4e-06     0.015   15.2   0.1     1    37     3    38     3    66 0.81 Dihydrodipicolinate reductase, N-terminus
Semialdhyde_dhC      PF02774.13   184 sp|Q5HQV4|G3P1_STAEQ -            336     0.017   14.9   0.0   1   1     8e-06      0.03   14.1   0.0    91   133   225   274   201   312 0.77 Semialdehyde dehydrogenase, dimerisation domain
Gp_dh_C              PF02800.15   157 sp|Q5HNL7|G3P2_STAEQ -            341   4.2e-64  214.7   1.0   1   1   1.3e-67   6.2e-64  214.1   1.0     2   157   159   311   158   311 0.99 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain
Gp_dh_N              PF00044.19   151 sp|Q5HNL7|G3P2_STAEQ -            341   2.6e-52  176.7   2.5   1   2   1.6e-55     8e-52  175.2   0.1     2   151     4   153     3   153 0.99 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain
DapB_N               PF01113.15   124 sp|Q5HNL7|G3P2_STAEQ -            341     0.071   13.0   2.7   1   2   2.9e-05      0.14   12.0   0.1     2    35     4    36     3   126 0.86 Dihydrodipicolinate reductase, N-terminus
PGI                  PF00342.14   486 sp|Q5HQJ9|G6PI_STAEQ -            443  2.3e-119  399.0   0.1   1   1  3.9e-123  2.9e-119  398.6   0.1    47   485    31   439     8   440 0.96 Phosphoglucose isomerase
Endonuc-BsobI        PF09194.5    316 sp|Q5HQJ9|G6PI_STAEQ -            443     0.098   11.5   0.0   1   1   2.2e-05      0.17   10.8   0.0   249   293    87   131    79   144 0.90 Restriction endonuclease BsobI
Amidase              PF01425.16   441 sp|Q5HN34|GATA_STAEQ -            485  2.5e-150  501.1   0.0   1   1  1.9e-154  2.9e-150  500.9   0.0     1   440    24   465    24   466 0.99 Amidase
GatB_N               PF02934.10   289 sp|Q5HN35|GATB_STAEQ -            475  1.3e-120  401.6   0.0   1   1  3.5e-124  1.7e-120  401.2   0.0     1   288     4   287     4   288 0.98 GatB/GatE catalytic domain
GatB_Yqey            PF02637.13   148 sp|Q5HN35|GATB_STAEQ -            475   3.5e-55  185.7   1.3   1   1     1e-58     5e-55  185.2   1.3     1   148   325   472   325   472 0.99 GatB domain
YqeY                 PF09424.5    143 sp|Q5HN35|GATB_STAEQ -            475     0.051   13.4   0.1   1   1   1.9e-05     0.094   12.5   0.1   102   143   431   472   391   472 0.90 Yqey-like protein
Glu-tRNAGln          PF02686.10    72 sp|Q5HN33|GATC_STAEQ -            100   1.3e-24   85.7   0.8   1   1   1.3e-28     2e-24   85.1   0.8     1    72    20    91    20    91 0.99 Glu-tRNAGln amidotransferase C subunit
GCHY-1               PF02649.9    276 sp|Q5HRI1|GCH4_STAEQ -            292   3.9e-71  239.5   0.0   1   1     3e-75   4.5e-71  239.3   0.0     1   276    33   286    33   286 0.97 Type I GTP cyclohydrolase folE2
GCV_H                PF01597.14   122 sp|Q5HQR3|GCSH_STAEQ -            126   4.5e-49  165.1   2.4   1   1     1e-52   4.9e-49  165.0   2.4     2   119     8   124     7   126 0.98 Glycine cleavage H-protein
Biotin_lipoyl        PF00364.17    74 sp|Q5HQR3|GCSH_STAEQ -            126     0.011   15.3   0.1   1   1   4.6e-06     0.023   14.3   0.1    25    61    47    83    36    88 0.89 Biotin-requiring enzyme
RnfC_N               PF13375.1    101 sp|Q5HQR3|GCSH_STAEQ -            126     0.051   13.3   0.0   1   1   1.5e-05     0.072   12.8   0.0    48    88    46    87    39   109 0.85 RnfC Barrel sandwich hybrid domain
GDC-P                PF02347.11   429 sp|Q5HP13|GCSPA_STAEQ -            448  1.2e-147  492.1   0.2   1   1  3.8e-151  1.4e-147  491.8   0.2     1   426     3   440     3   442 0.94 Glycine cleavage system P-protein
Aminotran_5          PF00266.14   371 sp|Q5HP13|GCSPA_STAEQ -            448   7.1e-07   28.2   0.0   1   1   3.3e-10   1.2e-06   27.5   0.0    75   174   144   240    86   265 0.83 Aminotransferase class-V
Cys_Met_Meta_PP      PF01053.15   386 sp|Q5HP13|GCSPA_STAEQ -            448   2.9e-06   25.8   0.2   1   1   1.2e-09   4.4e-06   25.2   0.2    62   197   120   262   114   266 0.75 Cys/Met metabolism PLP-dependent enzyme
DegT_DnrJ_EryC1      PF01041.12   363 sp|Q5HP13|GCSPA_STAEQ -            448     0.065   12.2   0.1   2   2   8.9e-05      0.33    9.9   0.0    91   141   184   236   139   248 0.81 DegT/DnrJ/EryC1/StrS aminotransferase family
GDC-P                PF02347.11   429 sp|Q5HP14|GCSPB_STAEQ -            502   5.8e-15   54.9   0.0   1   2   7.2e-14   1.5e-10   40.3   0.0    40   289    43   305    13   313 0.76 Glycine cleavage system P-protein
GDC-P                PF02347.11   429 sp|Q5HP14|GCSPB_STAEQ -            502   5.8e-15   54.9   0.0   2   2   1.7e-05     0.037   12.7   0.0   331   383   337   389   333   444 0.74 Glycine cleavage system P-protein
Aminotran_5          PF00266.14   371 sp|Q5HP14|GCSPB_STAEQ -            502   9.9e-09   34.3   0.1   1   1   7.4e-12   1.6e-08   33.7   0.1    84   207   157   280   143   283 0.85 Aminotransferase class-V
Beta_elim_lyase      PF01212.16   290 sp|Q5HP14|GCSPB_STAEQ -            502   2.2e-06   27.0   0.0   1   1   1.3e-09   2.8e-06   26.6   0.0    30   202   116   280   104   388 0.82 Beta-eliminating lyase
DegT_DnrJ_EryC1      PF01041.12   363 sp|Q5HP14|GCSPB_STAEQ -            502   0.00013   21.0   0.1   1   2   1.8e-07   0.00039   19.5   0.0    47   146   138   246   104   276 0.77 DegT/DnrJ/EryC1/StrS aminotransferase family
Pyridoxal_deC        PF00282.14   373 sp|Q5HP14|GCSPB_STAEQ -            502    0.0099   14.3   0.0   2   2   0.00032      0.69    8.2   0.0   319   361   335   375   327   384 0.86 Pyridoxal-dependent decarboxylase conserved domain
Cys_Met_Meta_PP      PF01053.15   386 sp|Q5HP14|GCSPB_STAEQ -            502     0.059   11.6   0.0   1   1   3.9e-05     0.082   11.1   0.0    95   195   164   266   118   279 0.73 Cys/Met metabolism PLP-dependent enzyme
Aminotran_3          PF00202.16   339 sp|Q5HP14|GCSPB_STAEQ -            502     0.094   11.5   0.0   1   1     7e-05      0.15   10.8   0.0    61   130   117   184   102   215 0.85 Aminotransferase class-III
GCV_T                PF01571.16   211 sp|Q5HP12|GCST_STAEQ -            363   4.1e-73  245.2   0.0   1   1   1.4e-76   5.3e-73  244.8   0.0     1   210    49   257    49   258 0.98 Aminomethyltransferase folate-binding domain
GCV_T_C              PF08669.6     95 sp|Q5HP12|GCST_STAEQ -            363     4e-24   84.4   0.1   1   1   1.7e-27   6.4e-24   83.7   0.1     2    94   266   357   265   358 0.97 Glycine cleavage T-protein C-terminal barrel domain
SoxG                 PF04268.7    147 sp|Q5HP12|GCST_STAEQ -            363   1.2e-06   28.4   0.0   2   2   2.1e-08   7.7e-05   22.5   0.0    42   143   111   217    84   219 0.81 Sarcosine oxidase, gamma subunit family
TrmE_N               PF10396.4    114 sp|Q5HP12|GCST_STAEQ -            363    0.0016   18.3   0.0   1   2   6.3e-05      0.24   11.4   0.0    15    65    56   109    51   139 0.83 GTP-binding protein TrmE N-terminus
PRD                  PF00874.15    89 sp|Q5HPI3|GLCT_STAEQ -            282     1e-39  134.5  21.6   1   2   9.4e-26   3.5e-22   78.3   1.2     8    88    85   165    75   166 0.90 PRD domain
PRD                  PF00874.15    89 sp|Q5HPI3|GLCT_STAEQ -            282     1e-39  134.5  21.6   2   2   7.8e-22   2.9e-18   65.7   8.4     3    87   185   273   183   275 0.96 PRD domain
CAT_RBD              PF03123.10    59 sp|Q5HPI3|GLCT_STAEQ -            282   8.4e-22   76.6   4.9   1   1   2.3e-25   8.4e-22   76.6   4.9     1    59     4    62     4    62 0.96 CAT RNA binding domain
PYNP_C               PF07831.8     75 sp|Q5HPI3|GLCT_STAEQ -            282     0.029   13.8   1.5   1   2   1.5e-05     0.055   12.9   0.2    33    68    30    65    21    68 0.89 Pyrimidine nucleoside phosphorylase C-terminal domain
DUF1769              PF08588.5     56 sp|Q5HPI3|GLCT_STAEQ -            282      0.04   13.8   0.0   1   1   3.1e-05      0.11   12.4   0.0     9    42   229   261   228   268 0.85 Protein of unknown function (DUF1769)
Sugar_transport      PF06800.7    269 sp|Q5HLZ2|GLCU_STAEQ -            287   2.5e-99  331.7  31.8   1   1    6e-103     3e-99  331.4  31.8     2   268    20   282    19   283 0.98 Sugar transport protein
EamA                 PF00892.15   126 sp|Q5HLZ2|GLCU_STAEQ -            287   3.1e-07   30.4  30.9   1   2   1.4e-05      0.07   13.1  15.3     2   122    15   131     8   139 0.74 EamA-like transporter family
EamA                 PF00892.15   126 sp|Q5HLZ2|GLCU_STAEQ -            287   3.1e-07   30.4  30.9   2   2   1.1e-08   5.5e-05   23.2   7.1    14   125   178   280   164   281 0.77 EamA-like transporter family
PGM_PMM_I            PF02878.11   138 sp|Q5HM67|GLMM_STAEQ -            451     3e-43  146.6   0.0   1   2     4e-46   1.2e-42  144.6   0.0     2   133     3   135     2   139 0.96 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I
PGM_PMM_III          PF02880.11   113 sp|Q5HM67|GLMM_STAEQ -            451     1e-31  109.2   0.2   1   1   6.8e-35     2e-31  108.3   0.2     1   113   259   371   259   371 0.94 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III
PGM_PMM_II           PF02879.11   104 sp|Q5HM67|GLMM_STAEQ -            451   2.9e-18   66.1   0.1   1   1   6.1e-21   1.8e-17   63.5   0.0     1   104   159   255   159   255 0.93 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II
PGM_PMM_IV           PF00408.15    73 sp|Q5HM67|GLMM_STAEQ -            451   3.4e-16   59.0   0.8   1   1     3e-19     9e-16   57.6   0.6     1    72   375   443   375   444 0.95 Phosphoglucomutase/phosphomannomutase, C-terminal domain
Staph_haemo          PF05480.6     43 sp|Q5HM67|GLMM_STAEQ -            451      0.12   12.0   0.5   1   1   9.9e-05      0.29   10.8   0.1    11    33   423   445   420   449 0.91 Staphylococcus haemolytic protein
Hexapep              PF00132.19    36 sp|Q5HRQ6|GLMU_STAEQ -            451   1.5e-25   87.5  21.4   1   5   1.6e-06    0.0035   16.7   1.0     2    28   260   286   259   286 0.89 Bacterial transferase hexapeptide (six repeats)
Hexapep              PF00132.19    36 sp|Q5HRQ6|GLMU_STAEQ -            451   1.5e-25   87.5  21.4   2   5   1.6e-06    0.0035   16.7   0.1     1    30   283   311   283   314 0.91 Bacterial transferase hexapeptide (six repeats)
Hexapep              PF00132.19    36 sp|Q5HRQ6|GLMU_STAEQ -            451   1.5e-25   87.5  21.4   3   5   5.4e-09   1.2e-05   24.6   0.0     1    35   316   350   316   351 0.95 Bacterial transferase hexapeptide (six repeats)
Hexapep              PF00132.19    36 sp|Q5HRQ6|GLMU_STAEQ -            451   1.5e-25   87.5  21.4   4   5   2.3e-05     0.049   13.1   0.2     4    32   354   381   351   383 0.92 Bacterial transferase hexapeptide (six repeats)
Hexapep              PF00132.19    36 sp|Q5HRQ6|GLMU_STAEQ -            451   1.5e-25   87.5  21.4   5   5   6.7e-11   1.4e-07   30.6   1.1     2    35   394   427   393   428 0.96 Bacterial transferase hexapeptide (six repeats)
NTP_transferase      PF00483.18   248 sp|Q5HRQ6|GLMU_STAEQ -            451   8.9e-24   84.1   0.2   1   1   5.8e-27   1.2e-23   83.6   0.2     2   224     5   218     4   238 0.87 Nucleotidyl transferase
NTP_transf_3         PF12804.2    160 sp|Q5HRQ6|GLMU_STAEQ -            451   7.3e-23   81.4   0.0   1   1   4.9e-26     1e-22   80.9   0.0     1   133     5   138     5   195 0.85 MobA-like NTP transferase domain
IspD                 PF01128.14   221 sp|Q5HRQ6|GLMU_STAEQ -            451   7.3e-10   38.7   1.1   1   1   5.8e-13   1.2e-09   37.9   1.1     2   129     4   129     3   134 0.86 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase
Hexapep_2            PF14602.1     34 sp|Q5HRQ6|GLMU_STAEQ -            451     1e-07   31.3  11.8   5   5     4e-07   0.00084   18.8   0.5     2    33   394   427   393   428 0.94 Hexapeptide repeat of succinyl-transferase
CTP_transf_3         PF02348.14   217 sp|Q5HRQ6|GLMU_STAEQ -            451   3.9e-07   29.9   0.1   1   1   2.7e-10   5.6e-07   29.4   0.1     2   176     5   182     4   244 0.75 Cytidylyltransferase
CofC                 PF01983.11   217 sp|Q5HRQ6|GLMU_STAEQ -            451    0.0053   15.7   0.0   1   1   4.7e-06      0.01   14.8   0.0     4   115     7   120     4   131 0.81 Guanylyl transferase CofC like
Gln-synt_C           PF00120.19   259 sp|Q5HPN2|GLNA_STAEQ -            446   1.2e-98  329.4   0.0   1   1    2e-102   1.5e-98  329.0   0.0     2   259   108   356   107   356 0.96 Glutamine synthetase, catalytic domain
Gln-synt_N           PF03951.14    84 sp|Q5HPN2|GLNA_STAEQ -            446     3e-31  106.8   0.0   1   1   8.3e-35   6.1e-31  105.8   0.0     1    83    19   100    19   101 0.98 Glutamine synthetase, beta-Grasp domain
DAO                  PF01266.19   358 sp|Q5HPP0|GLPD_STAEQ -            557   2.7e-58  197.5   0.0   1   1   3.1e-61   3.8e-58  197.1   0.0     1   336    21   363    21   380 0.88 FAD dependent oxidoreductase
FAD_binding_2        PF00890.19   417 sp|Q5HPP0|GLPD_STAEQ -            557   1.2e-08   34.3   1.8   1   2   4.8e-07    0.0006   18.7   1.4     1    41    21    61    21    89 0.91 FAD binding domain
FAD_binding_2        PF00890.19   417 sp|Q5HPP0|GLPD_STAEQ -            557   1.2e-08   34.3   1.8   2   2   1.6e-05      0.02   13.7   0.0   143   202   173   233   162   249 0.88 FAD binding domain
FAD_binding_3        PF01494.14   356 sp|Q5HPP0|GLPD_STAEQ -            557   3.3e-08   32.9   0.5   1   1     6e-11   7.4e-08   31.8   0.5     1   254    19   312    19   343 0.77 FAD binding domain
FAD_oxidored         PF12831.2    428 sp|Q5HPP0|GLPD_STAEQ -            557   1.8e-07   30.6   4.3   1   1   3.9e-09   4.9e-06   25.8   4.3     1   147    21   231    21   232 0.69 FAD dependent oxidoreductase
Pyr_redox_2          PF07992.9    201 sp|Q5HPP0|GLPD_STAEQ -            557   1.6e-05   24.8   5.0   1   1   8.9e-07    0.0011   18.8   5.0     1   119    21   231    21   259 0.77 Pyridine nucleotide-disulphide oxidoreductase
Lycopene_cycl        PF05834.7    374 sp|Q5HPP0|GLPD_STAEQ -            557   0.00012   21.1   0.3   1   3   3.4e-05     0.042   12.7   0.1     1    34    21    52    21    63 0.91 Lycopene cyclase protein
Thi4                 PF01946.12   230 sp|Q5HPP0|GLPD_STAEQ -            557   0.00016   20.8   0.5   1   3   1.5e-05     0.018   14.1   0.0    10    49    12    51     5    64 0.84 Thi4 family
Pyr_redox            PF00070.22    80 sp|Q5HPP0|GLPD_STAEQ -            557   0.00021   21.6   3.0   1   2   1.1e-06    0.0013   19.0   0.5     2    32    22    52    21    94 0.88 Pyridine nucleotide-disulphide oxidoreductase
NAD_binding_8        PF13450.1     68 sp|Q5HPP0|GLPD_STAEQ -            557   0.00079   19.4   0.8   1   1   2.6e-06    0.0032   17.4   0.8     1    39    24    62    24   100 0.86 NAD(P)-binding Rossmann-like domain
GIDA                 PF01134.17   392 sp|Q5HPP0|GLPD_STAEQ -            557    0.0028   16.5   0.7   1   2   6.5e-06     0.008   15.0   0.4     1    36    21    54    21    97 0.85 Glucose inhibited division protein A
3HCDH_N              PF02737.13   180 sp|Q5HPP0|GLPD_STAEQ -            557    0.0052   16.4   0.8   1   1   7.9e-06    0.0097   15.5   0.8     2    32    22    52    21    86 0.83 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain
HI0933_like          PF03486.9    409 sp|Q5HPP0|GLPD_STAEQ -            557     0.094   11.1   0.8   1   1   0.00016       0.2   10.0   0.8     1    32    20    51    20    55 0.93 HI0933-like protein
FGGY_N               PF00370.16   245 sp|Q5HPP1|GLPK_STAEQ -            499   1.1e-89  299.9   0.1   1   1   3.3e-93   1.7e-89  299.3   0.1     1   245     4   251     4   251 0.99 FGGY family of carbohydrate kinases, N-terminal domain
FGGY_C               PF02782.11   198 sp|Q5HPP1|GLPK_STAEQ -            499   6.6e-65  218.4   0.3   2   2   2.7e-68   1.3e-64  217.4   0.1     1   198   260   450   260   450 0.98 FGGY family of carbohydrate kinases, C-terminal domain
BcrAD_BadFG          PF01869.15   271 sp|Q5HPP1|GLPK_STAEQ -            499     0.013   14.8   0.0   1   2   0.00015      0.74    9.0   0.0     3    33     8    38     6   281 0.87 BadF/BadG/BcrA/BcrD ATPase family
SHMT                 PF00464.14   399 sp|Q5HMB0|GLYA_STAEQ -            412  6.9e-178  591.0   3.0   1   1  2.7e-181    8e-178  590.8   3.0     1   399     4   381     4   381 0.99 Serine hydroxymethyltransferase
Beta_elim_lyase      PF01212.16   290 sp|Q5HMB0|GLYA_STAEQ -            412   9.4e-08   31.5   0.4   1   1   4.4e-11   1.3e-07   31.0   0.4    36   235    76   310    36   407 0.81 Beta-eliminating lyase
Aminotran_1_2        PF00155.16   363 sp|Q5HMB0|GLYA_STAEQ -            412     1e-07   31.3   0.2   1   2   6.3e-11   1.9e-07   30.4   0.0    31   338    52   345    23   371 0.72 Aminotransferase class I and II
DegT_DnrJ_EryC1      PF01041.12   363 sp|Q5HMB0|GLYA_STAEQ -            412   0.00051   19.1   0.1   1   1   2.7e-07    0.0008   18.5   0.1    33   187    77   238    75   256 0.76 DegT/DnrJ/EryC1/StrS aminotransferase family
Aminotran_5          PF00266.14   371 sp|Q5HMB0|GLYA_STAEQ -            412    0.0023   16.7   0.8   2   2   2.5e-06    0.0073   15.0   0.1    85   224   106   249    69   256 0.64 Aminotransferase class-V
NAD_Gly3P_dh_C       PF07479.9    149 sp|Q5HP71|GPDA_STAEQ -            332   8.5e-52  174.8   0.6   1   1   1.5e-54     2e-51  173.6   0.6     1   147   180   322   180   324 0.98 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus
NAD_Gly3P_dh_N       PF01210.18   157 sp|Q5HP71|GPDA_STAEQ -            332   1.5e-49  167.7   0.3   1   1   2.1e-52   2.8e-49  166.8   0.3     1   156     3   161     3   162 0.99 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus
F420_oxidored        PF03807.12    96 sp|Q5HP71|GPDA_STAEQ -            332   4.2e-10   39.9   0.9   1   1   1.5e-12     2e-09   37.7   0.0     1    95     3   106     3   107 0.93 NADP oxidoreductase coenzyme F420-dependent
UDPG_MGDP_dh_N       PF03721.9    185 sp|Q5HP71|GPDA_STAEQ -            332   6.6e-10   38.6   0.1   1   1   1.2e-12   1.6e-09   37.3   0.1     2   111     3   106     2   114 0.88 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain
ApbA                 PF02558.11   151 sp|Q5HP71|GPDA_STAEQ -            332     1e-07   31.5   0.3   1   2     4e-10   5.4e-07   29.1   0.0     1   105     4   109     4   123 0.84 Ketopantoate reductase PanE/ApbA
NAD_binding_2        PF03446.10   163 sp|Q5HP71|GPDA_STAEQ -            332   3.1e-07   30.3   0.7   1   2   7.1e-10   9.6e-07   28.7   0.2     1   106     1   117     1   144 0.82 NAD binding domain of 6-phosphogluconate dehydrogenase
3HCDH_N              PF02737.13   180 sp|Q5HP71|GPDA_STAEQ -            332   8.1e-05   22.3   0.1   1   1   1.6e-07   0.00022   20.9   0.0     1    56     3    56     3    87 0.78 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain
IlvN                 PF07991.7    165 sp|Q5HP71|GPDA_STAEQ -            332   0.00023   20.5   0.6   1   2   1.4e-06    0.0019   17.6   0.3     5    96     2   107     1   114 0.79 Acetohydroxy acid isomeroreductase, catalytic domain
TrkA_N               PF02254.13   116 sp|Q5HP71|GPDA_STAEQ -            332    0.0017   18.3   0.0   1   1   6.1e-06    0.0082   16.1   0.0     1    43     4    46     4    69 0.83 TrkA-N domain
2-Hacid_dh_C         PF02826.14   178 sp|Q5HP71|GPDA_STAEQ -            332    0.0082   15.3   0.8   1   2   4.1e-05     0.055   12.6   0.1    38    81     3    46     1   108 0.85 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain
ApbA_C               PF08546.6    125 sp|Q5HP71|GPDA_STAEQ -            332     0.029   14.3   0.3   1   1    0.0002      0.27   11.2   0.2    24   121   200   311   188   313 0.63 Ketopantoate reductase PanE/ApbA C terminal
His_Phos_1           PF00300.17   158 sp|Q5HLI0|GPMA_STAEQ -            228   1.4e-41  142.2   0.2   1   1   1.7e-45   2.5e-41  141.3   0.2     1   158     3   189     3   189 0.95 Histidine phosphatase superfamily (branch 1)
iPGM_N               PF06415.8    223 sp|Q5HQV1|GPMI_STAEQ -            505   4.9e-87  290.9   2.1   1   1   1.8e-90   6.5e-87  290.5   2.1     1   223    82   302    82   302 0.99 BPG-independent PGAM N-terminus (iPGM_N)
Metalloenzyme        PF01676.13   252 sp|Q5HQV1|GPMI_STAEQ -            505   1.5e-85  286.5   0.6   1   1   4.8e-89   1.8e-85  286.3   0.6     2   251     5   499     4   500 0.99 Metalloenzyme superfamily
Phosphodiest         PF01663.17   365 sp|Q5HQV1|GPMI_STAEQ -            505   1.3e-06   28.0   0.5   2   2     6e-10   2.2e-06   27.2   0.1   172   248   374   444   278   487 0.82 Type I phosphodiesterase / nucleotide pyrophosphatase
PglZ                 PF08665.7    181 sp|Q5HQV1|GPMI_STAEQ -            505     0.012   15.3   0.0   1   1   1.2e-05     0.043   13.4   0.0   123   174   397   441   350   444 0.74 PglZ domain
DivIVA               PF05103.8    131 sp|Q5HP97|GPSB_STAEQ -            112   1.9e-21   76.4   6.5   1   1   8.5e-23   9.6e-20   70.9   6.5     1   131     8   111     8   111 0.94 DivIVA protein
DUF972               PF06156.8    107 sp|Q5HP97|GPSB_STAEQ -            112     6e-06   26.5   2.2   1   1   7.2e-09   8.2e-06   26.1   2.2     9    81    30   102    22   107 0.85 Protein of unknown function (DUF972)
DivIC                PF04977.10    80 sp|Q5HP97|GPSB_STAEQ -            112    0.0052   16.2   0.7   1   1   4.5e-06    0.0052   16.2   0.7    24    51    43    70    36    77 0.83 Septum formation initiator
Ax_dynein_light      PF10211.4    189 sp|Q5HP97|GPSB_STAEQ -            112     0.013   15.2   1.8   1   1   1.3e-05     0.015   15.1   1.8   118   177    41   101    14   110 0.84 Axonemal dynein light chain
UBN_AB               PF14075.1    214 sp|Q5HP97|GPSB_STAEQ -            112     0.019   14.6   1.6   1   1   2.9e-05     0.033   13.8   1.6    52   124    25    97    10   109 0.84 Ubinuclein conserved middle domain
Kinesin-relat_1      PF12711.2     86 sp|Q5HP97|GPSB_STAEQ -            112     0.019   15.3   2.8   1   1   2.7e-05      0.03   14.6   2.1    19    64    24    70    15    80 0.77 Kinesin motor
bZIP_1               PF00170.16    64 sp|Q5HP97|GPSB_STAEQ -            112     0.022   14.6   3.4   1   2     2e-05     0.022   14.6   3.4    26    57    43    74    42    81 0.88 bZIP transcription factor
IncA                 PF04156.9    191 sp|Q5HP97|GPSB_STAEQ -            112     0.024   14.2   1.5   1   1   2.5e-05     0.028   14.0   1.5    82   150    37   106    15   109 0.85 IncA protein
SurA_N_2             PF13623.1    145 sp|Q5HP97|GPSB_STAEQ -            112     0.024   14.6   0.2   1   1   2.6e-05      0.03   14.3   0.2    34    85    24    73    10    82 0.81 SurA N-terminal domain
Ribosomal_L29        PF00831.18    58 sp|Q5HP97|GPSB_STAEQ -            112     0.033   13.8   1.1   1   1   6.6e-05     0.076   12.7   0.7    11    37    54    80    43    86 0.83 Ribosomal L29 protein
Herpes_BLRF2         PF05812.7    118 sp|Q5HP97|GPSB_STAEQ -            112     0.034   13.9   5.1   1   1   2.9e-05     0.033   14.0   3.8     3    30    43    70    41    95 0.82 Herpesvirus BLRF2 protein
bZIP_2               PF07716.10    54 sp|Q5HP97|GPSB_STAEQ -            112     0.057   13.2   4.9   1   1     5e-05     0.057   13.2   4.9    25    52    43    70    43    72 0.95 Basic region leucine zipper
HALZ                 PF02183.13    45 sp|Q5HP97|GPSB_STAEQ -            112      0.06   13.0   1.5   1   1   5.2e-05      0.06   13.0   1.5    16    37    54    75    49    82 0.72 Homeobox associated leucine zipper
GreA_GreB_N          PF03449.10    74 sp|Q5HNU0|GREA_STAEQ -            158     5e-30  103.3   2.8   1   1   1.9e-33     7e-30  102.9   2.8     3    73     4    76     1    77 0.95 Transcription elongation factor, N-terminal
GreA_GreB            PF01272.14    77 sp|Q5HNU0|GREA_STAEQ -            158   4.8e-24   83.8   0.3   1   1     2e-27   7.5e-24   83.2   0.3     2    76    83   158    81   158 0.97 Transcription elongation factor, GreA/GreB, C-term
eIF-4B               PF06273.6    492 sp|Q5HNU0|GREA_STAEQ -            158     0.011   14.5   0.3   1   1   3.2e-06     0.012   14.4   0.3   348   426    14   102    10   148 0.75 Plant specific eukaryotic initiation factor 4B
Kri1                 PF05178.7    101 sp|Q5HNU0|GREA_STAEQ -            158     0.037   14.3   0.8   1   1   1.6e-05      0.06   13.6   0.8     8    42    14    48     9    86 0.77 KRI1-like family
GrpE                 PF01025.14   166 sp|Q5HNW5|GRPE_STAEQ -            210   1.1e-49  168.2  11.1   1   1   5.7e-53   1.7e-49  167.5  11.1     3   166    47   210     3   210 0.96 GrpE
SDA1                 PF05285.7    324 sp|Q5HNW5|GRPE_STAEQ -            210      0.33   10.2  17.0   1   1   0.00013       0.4    9.9  17.0    90   192     4   111     1   156 0.66 SDA1
Aminotran_3          PF00202.16   339 sp|Q5HNN6|GSA1_STAEQ -            427   3.2e-71  239.9   0.0   1   1   5.2e-75   3.9e-71  239.6   0.0     2   338    38   361    37   362 0.97 Aminotransferase class-III
Aminotran_1_2        PF00155.16   363 sp|Q5HNN6|GSA1_STAEQ -            427     0.061   12.2   0.0   1   1   8.9e-06     0.066   12.1   0.0   120   197   181   249    72   397 0.80 Aminotransferase class I and II
Aminotran_3          PF00202.16   339 sp|Q5HN71|GSA2_STAEQ -            429   7.1e-71  238.7   0.0   1   1   1.3e-74   9.4e-71  238.3   0.0     2   325    39   350    38   362 0.89 Aminotransferase class-III
Metallophos_C        PF14008.1     62 sp|Q5HN71|GSA2_STAEQ -            429      0.12   12.4   0.1   1   1   4.4e-05      0.33   11.0   0.1    24    58   346   380   333   384 0.88 Iron/zinc purple acid phosphatase-like protein C
Trypsin_2            PF13365.1    120 sp|Q5HN75|GSEA_STAEQ -            282     2e-17   63.2   0.6   1   1   2.2e-20   4.1e-17   62.2   0.6     1   120   102   249   102   249 0.77 Trypsin-like peptidase domain
Trypsin              PF00089.21   220 sp|Q5HN75|GSEA_STAEQ -            282   1.3e-13   51.0   3.4   1   1     8e-16   1.5e-12   47.5   3.4    24   210    99   263    77   272 0.73 Trypsin
Peptidase_S7         PF00949.16   132 sp|Q5HN75|GSEA_STAEQ -            282   4.9e-07   29.2   5.3   1   1   1.1e-09     2e-06   27.2   5.0    59   128   194   261    78   266 0.84 Peptidase S7, Flavivirus NS3 serine protease
Peptidase_S46        PF10459.4    698 sp|Q5HN75|GSEA_STAEQ -            282   1.9e-05   23.3   0.2   1   1   2.1e-08   3.8e-05   22.3   0.2   627   654   227   254   224   273 0.86 Peptidase S46
Peptidase_S39        PF02122.10   203 sp|Q5HN75|GSEA_STAEQ -            282   8.9e-05   21.8   0.4   2   2     1e-06    0.0019   17.5   0.1   144   176   230   259   225   267 0.82 Peptidase S39
Peptidase_S32        PF05579.8    297 sp|Q5HN75|GSEA_STAEQ -            282    0.0035   16.3   0.2   2   2   1.3e-05     0.024   13.6   0.1   205   228   230   253   205   267 0.79 Equine arteritis virus serine endopeptidase S32
DUF31                PF01732.11   374 sp|Q5HN75|GSEA_STAEQ -            282     0.017   14.4   1.4   2   2   9.3e-06     0.017   14.4   1.4   349   374   227   252   187   252 0.87 Putative peptidase (DUF31)
Peptidase_C3         PF00548.15   172 sp|Q5HN75|GSEA_STAEQ -            282     0.035   13.9   1.3   1   1   2.7e-05     0.051   13.3   0.3   138   170   224   253   156   254 0.93 3C cysteine protease (picornain 3C)
NTP_transferase      PF00483.18   248 sp|Q5HLD1|GTAB_STAEQ -            288   2.7e-37  128.3   0.3   1   1   1.2e-40   3.5e-37  128.0   0.3     1   234     6   257     6   270 0.91 Nucleotidyl transferase
NTP_transf_3         PF12804.2    160 sp|Q5HLD1|GTAB_STAEQ -            288   7.7e-12   45.5   0.0   1   1   6.8e-15     2e-11   44.2   0.0     1   121     7   159     7   175 0.79 MobA-like NTP transferase domain
Glycos_transf_2      PF00535.21   169 sp|Q5HLD1|GTAB_STAEQ -            288   0.00047   19.8   0.0   1   1   2.4e-07    0.0007   19.3   0.0    43   128    89   173    52   209 0.71 Glycosyl transferase family 2
IspD                 PF01128.14   221 sp|Q5HLD1|GTAB_STAEQ -            288    0.0005   19.6   0.0   1   2     2e-06    0.0059   16.1   0.0     3    66     7    72     5    87 0.78 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase
CTP_transf_3         PF02348.14   217 sp|Q5HLD1|GTAB_STAEQ -            288     0.029   14.0   0.2   1   1   3.4e-05       0.1   12.2   0.1    16    49    27    60    24    77 0.83 Cytidylyltransferase
NIF3                 PF01784.13   242 sp|Q5HNY9|GTPC1_STAEQ -            366   1.3e-80  270.4   0.3   1   1   1.1e-84   1.7e-80  270.1   0.3     1   239     5   344     5   347 0.98 NIF3 (NGG1p interacting factor 3)
IMPDH                PF00478.20   352 sp|Q5HPK5|GUAC_STAEQ -            325  1.1e-100  336.9   0.0   1   1  1.5e-103  1.7e-100  336.3   0.0     2   346     3   320     2   324 0.93 IMP dehydrogenase / GMP reductase domain
FMN_dh               PF01070.13   357 sp|Q5HPK5|GUAC_STAEQ -            325   9.9e-08   31.1   0.4   2   3     2e-09   2.3e-06   26.7   0.2   215   313   128   233   102   242 0.84 FMN-dependent dehydrogenase
NMO                  PF03060.10   330 sp|Q5HPK5|GUAC_STAEQ -            325   4.4e-06   26.0   0.8   1   1   7.3e-09   8.4e-06   25.1   0.8   136   232   140   242    94   252 0.79 Nitronate monooxygenase
His_biosynth         PF00977.16   229 sp|Q5HPK5|GUAC_STAEQ -            325   2.1e-05   23.9   0.2   2   2   1.9e-05     0.021   14.0   0.0    65   107   192   234   168   245 0.66 Histidine biosynthesis protein
ThiG                 PF05690.9    247 sp|Q5HPK5|GUAC_STAEQ -            325     0.005   15.9   0.1   2   2   1.3e-05     0.015   14.3   0.0   156   209   181   234   153   240 0.87 Thiazole biosynthesis protein ThiG
DHO_dh               PF01180.16   295 sp|Q5HPK5|GUAC_STAEQ -            325    0.0069   15.3   0.2   2   2   3.3e-05     0.038   12.9   0.0   245   276   201   232   191   244 0.88 Dihydroorotate dehydrogenase
Glu_synthase         PF01645.12   368 sp|Q5HPK5|GUAC_STAEQ -            325     0.012   14.5   0.1   1   1     2e-05     0.022   13.6   0.1   274   304   200   230   188   234 0.85 Conserved region in glutamate synthase
Aldolase             PF01081.14   196 sp|Q5HPK5|GUAC_STAEQ -            325     0.019   14.1   0.0   1   1   6.1e-05      0.07   12.2   0.0     3    82    78   162    76   173 0.81 KDPG and KHG aldolase
TMP-TENI             PF02581.12   180 sp|Q5HPK5|GUAC_STAEQ -            325     0.029   13.4   0.2   1   1   4.2e-05     0.047   12.7   0.2    85   175   130   227   115   231 0.80 Thiamine monophosphate synthase/TENI
DNA_topoisoIV        PF00521.15   426 sp|Q5HK04|GYRA_STAEQ -            893    3e-159  530.4   0.4   1   1  5.9e-163  4.4e-159  529.8   0.4     1   425    33   473    33   474 0.98 DNA gyrase/topoisomerase IV, subunit A
DNA_gyraseA_C        PF03989.8     48 sp|Q5HK04|GYRA_STAEQ -            893     5e-69  227.4  10.4   1   6   3.7e-14   2.7e-10   39.3   0.0     3    47   508   552   506   553 0.94 DNA gyrase C-terminal domain, beta-propeller
DNA_gyraseA_C        PF03989.8     48 sp|Q5HK04|GYRA_STAEQ -            893     5e-69  227.4  10.4   2   6   2.8e-13     2e-09   36.5   0.0     1    47   556   605   556   606 0.96 DNA gyrase C-terminal domain, beta-propeller
DNA_gyraseA_C        PF03989.8     48 sp|Q5HK04|GYRA_STAEQ -            893     5e-69  227.4  10.4   3   6   2.5e-11   1.9e-07   30.2   0.1     1    46   613   656   613   658 0.96 DNA gyrase C-terminal domain, beta-propeller
DNA_gyraseA_C        PF03989.8     48 sp|Q5HK04|GYRA_STAEQ -            893     5e-69  227.4  10.4   4   6   4.7e-15   3.5e-11   42.2   0.0     2    47   662   707   661   708 0.94 DNA gyrase C-terminal domain, beta-propeller
DNA_gyraseA_C        PF03989.8     48 sp|Q5HK04|GYRA_STAEQ -            893     5e-69  227.4  10.4   5   6     1e-13   7.6e-10   37.9   0.1     1    42   713   755   713   761 0.92 DNA gyrase C-terminal domain, beta-propeller
DNA_gyraseA_C        PF03989.8     48 sp|Q5HK04|GYRA_STAEQ -            893     5e-69  227.4  10.4   6   6   2.9e-15   2.1e-11   42.9   0.2     2    48   765   811   764   811 0.94 DNA gyrase C-terminal domain, beta-propeller
DNA_gyraseB          PF00204.20   173 sp|Q5HK03|GYRB_STAEQ -            643   1.1e-60  203.7   0.1   1   1   6.9e-64     2e-60  202.9   0.1     1   172   231   400   231   401 0.99 DNA gyrase B
DNA_gyraseB_C        PF00986.16    65 sp|Q5HK03|GYRB_STAEQ -            643   1.9e-29  101.1   0.1   1   1   1.4e-32     4e-29  100.1   0.1     4    65   572   633   569   633 0.97 DNA gyrase B subunit, carboxyl terminus
Toprim               PF01751.17   100 sp|Q5HK03|GYRB_STAEQ -            643   6.9e-23   80.5   0.0   1   1   8.2e-26   2.4e-22   78.7   0.0     1   100   429   541   429   541 0.97 Toprim domain
HATPase_c            PF02518.21   111 sp|Q5HK03|GYRB_STAEQ -            643   1.2e-17   63.6   0.4   1   1   9.5e-21   2.8e-17   62.4   0.2     3   109    41   180    39   182 0.92 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
HATPase_c_3          PF13589.1    137 sp|Q5HK03|GYRB_STAEQ -            643   1.7e-05   24.4   0.0   1   1   1.3e-08   3.8e-05   23.3   0.0     7    53    48    94    43   182 0.82 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
ABM                  PF03992.11    78 sp|Q5HM56|HDOX_STAEQ -            104   1.5e-15   56.9   0.0   1   1   2.5e-19   1.8e-15   56.6   0.0     1    77     1    77     1    78 0.93 Antibiotic biosynthesis monooxygenase
Dehydratase_hem      PF13816.1    310 sp|Q5HM56|HDOX_STAEQ -            104     0.011   14.7   0.5   1   1   1.6e-06     0.012   14.7   0.5    39    89    38    88    11    99 0.77 Haem-containing dehydratase
GlutR_N              PF05201.10   152 sp|Q5HNN1|HEM1_STAEQ -            448   8.8e-48  161.7   0.8   1   1   1.3e-50   1.7e-47  160.7   0.2     1   152     6   157     6   157 0.98 Glutamyl-tRNAGlu reductase, N-terminal domain
Shikimate_DH         PF01488.15   135 sp|Q5HNN1|HEM1_STAEQ -            448   5.4e-38  130.1   0.1   1   1     9e-41   1.2e-37  129.0   0.1     1   134   171   305   171   306 0.97 Shikimate / quinate 5-dehydrogenase
GlutR_dimer          PF00745.15   101 sp|Q5HNN1|HEM1_STAEQ -            448   1.4e-24   85.9   3.3   1   1   2.2e-27   2.9e-24   84.9   1.9     7   101   325   420   317   420 0.95 Glutamyl-tRNAGlu reductase, dimerisation domain
F420_oxidored        PF03807.12    96 sp|Q5HNN1|HEM1_STAEQ -            448   6.1e-05   23.3   0.8   1   1   1.1e-07   0.00014   22.1   0.1     4    95   187   281   183   282 0.83 NADP oxidoreductase coenzyme F420-dependent
NAD_binding_7        PF13241.1    103 sp|Q5HNN1|HEM1_STAEQ -            448   0.00035   20.7   2.1   1   1   3.4e-07   0.00046   20.4   0.0     2    71   177   253   176   275 0.77 Putative NAD(P)-binding
NAD_binding_2        PF03446.10   163 sp|Q5HNN1|HEM1_STAEQ -            448    0.0019   18.0   0.0   1   1   3.4e-06    0.0045   16.8   0.0     5    72   186   254   182   279 0.73 NAD binding domain of 6-phosphogluconate dehydrogenase
THF_DHG_CYH_C        PF02882.14   161 sp|Q5HNN1|HEM1_STAEQ -            448    0.0031   16.6   0.8   2   2   0.00012      0.16   11.0   0.5    20    71   166   217   161   281 0.76 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain
ThiF                 PF00899.16   136 sp|Q5HNN1|HEM1_STAEQ -            448    0.0056   16.4   0.6   1   1   1.3e-05     0.018   14.8   0.2     2    33   182   213   181   216 0.93 ThiF family
Saccharop_dh         PF03435.13   386 sp|Q5HNN1|HEM1_STAEQ -            448     0.013   14.5   0.1   1   1   1.4e-05     0.019   13.9   0.1     2    74   186   249   185   271 0.86 Saccharopine dehydrogenase
IlvN                 PF07991.7    165 sp|Q5HNN1|HEM1_STAEQ -            448     0.017   14.4   0.0   1   1   2.7e-05     0.036   13.4   0.0     2    65   180   247   179   272 0.80 Acetohydroxy acid isomeroreductase, catalytic domain
GFO_IDH_MocA         PF01408.17   120 sp|Q5HNN1|HEM1_STAEQ -            448     0.038   14.5   0.0   1   1   0.00013      0.17   12.3   0.0     2    66   184   246   183   267 0.75 Oxidoreductase family, NAD-binding Rossmann fold
ALAD                 PF00490.16   324 sp|Q5HNN5|HEM2_STAEQ -            324  4.7e-146  485.8   0.3   1   1  3.5e-150  5.2e-146  485.6   0.3     3   323     3   321     1   322 0.99 Delta-aminolevulinic acid dehydratase
Porphobil_deam       PF01379.15   215 sp|Q5HNN3|HEM3_STAEQ -            308   1.6e-90  301.7   0.0   1   1   2.6e-94     2e-90  301.4   0.0     2   214     4   215     3   216 0.98 Porphobilinogen deaminase, dipyromethane cofactor binding domain
Porphobil_deamC      PF03900.10    74 sp|Q5HNN3|HEM3_STAEQ -            308   4.9e-22   77.8   0.0   1   1   1.3e-25   9.3e-22   76.9   0.0     1    73   224   293   224   294 0.91 Porphobilinogen deaminase, C-terminal domain
Ferrochelatase       PF00762.14   316 sp|Q5HNA5|HEMH_STAEQ -            307   4.3e-77  259.1   0.1   1   1   3.3e-81   4.9e-77  258.9   0.1     2   315     5   306     4   307 0.96 Ferrochelatase
HisG                 PF01634.13   163 sp|Q5HKN7|HIS1_STAEQ -            204   2.3e-40  137.8   0.5   1   1   2.2e-44   3.3e-40  137.3   0.5     2   160    51   198    50   201 0.92 ATP phosphoribosyltransferase
PRA-CH               PF01502.13    75 sp|Q5HKP3|HIS2_STAEQ -            211   1.4e-36  123.9   1.3   1   1     5e-40   1.5e-36  123.8   0.2     1    74    26    99    26   100 0.99 Phosphoribosyl-AMP cyclohydrolase
PRA-PH               PF01503.12    83 sp|Q5HKP3|HIS2_STAEQ -            211   1.2e-09   38.3   0.2   1   1     7e-13   2.1e-09   37.5   0.2     3    79   110   191   108   197 0.85 Phosphoribosyl-ATP pyrophosphohydrolase
MazG                 PF03819.12    74 sp|Q5HKP3|HIS2_STAEQ -            211   0.00099   19.0   0.1   1   1   9.1e-07    0.0027   17.6   0.1     4    69   137   198   125   201 0.85 MazG nucleotide pyrophosphohydrolase domain
Tropomodulin         PF03250.9    147 sp|Q5HKP3|HIS2_STAEQ -            211     0.021   14.3   0.0   1   1   1.3e-05     0.038   13.5   0.0    67   123    24    80    17    85 0.90 Tropomodulin
Peptidase_M10        PF00413.19   154 sp|Q5HKP3|HIS2_STAEQ -            211     0.079   12.6   0.5   2   2   7.1e-05      0.21   11.2   0.1    23    87   139   204   119   206 0.82 Matrixin
His_biosynth         PF00977.16   229 sp|Q5HKP1|HIS4_STAEQ -            234   9.7e-61  204.9   0.0   1   1   7.4e-64   1.1e-60  204.7   0.0     2   228     4   229     3   230 0.98 Histidine biosynthesis protein
Trp_syntA            PF00290.15   259 sp|Q5HKP1|HIS4_STAEQ -            234   3.6e-06   25.7   0.1   1   2   1.6e-08   2.3e-05   23.0   0.0   186   250    64   129    13   138 0.84 Tryptophan synthase alpha chain
PcrB                 PF01884.12   231 sp|Q5HKP1|HIS4_STAEQ -            234   0.00012   21.4   0.0   1   2   4.7e-07   0.00069   18.9   0.0   173   213    67   107    42   123 0.85 PcrB family
NMO                  PF03060.10   330 sp|Q5HKP1|HIS4_STAEQ -            234     0.011   14.9   0.0   2   2   6.6e-05     0.098   11.7   0.0   178   219   180   221   163   223 0.85 Nitronate monooxygenase
QRPTase_C            PF01729.14   169 sp|Q5HKP1|HIS4_STAEQ -            234     0.016   14.7   0.0   1   2    0.0001      0.15   11.5   0.0    91   156    41   106    13   114 0.68 Quinolinate phosphoribosyl transferase, C-terminal domain
FMN_dh               PF01070.13   357 sp|Q5HKP1|HIS4_STAEQ -            234      0.13   11.1   0.0   1   1   0.00061      0.91    8.3   0.0   279   312   191   224    22   229 0.62 FMN-dependent dehydrogenase
His_biosynth         PF00977.16   229 sp|Q5HKP2|HIS6_STAEQ -            252   1.3e-79  266.7   0.3   1   1   7.8e-83   1.4e-79  266.5   0.3     1   228     5   235     5   236 0.97 Histidine biosynthesis protein
TMP-TENI             PF02581.12   180 sp|Q5HKP2|HIS6_STAEQ -            252   1.3e-07   30.9   0.0   1   2   2.5e-06    0.0046   16.0   0.0   129   178    53   104    34   106 0.88 Thiamine monophosphate synthase/TENI
TMP-TENI             PF02581.12   180 sp|Q5HKP2|HIS6_STAEQ -            252   1.3e-07   30.9   0.0   2   2   2.4e-05     0.045   12.8   0.0   116   159   162   207   154   223 0.85 Thiamine monophosphate synthase/TENI
Dus                  PF01207.12   310 sp|Q5HKP2|HIS6_STAEQ -            252   1.4e-06   27.3   0.1   1   2   4.3e-06     0.008   15.0   0.0   172   229    63   120    53   130 0.86 Dihydrouridine synthase (Dus)
Dus                  PF01207.12   310 sp|Q5HKP2|HIS6_STAEQ -            252   1.4e-06   27.3   0.1   2   2   0.00011      0.21   10.4   0.0   163   213   177   227   151   247 0.78 Dihydrouridine synthase (Dus)
PcrB                 PF01884.12   231 sp|Q5HKP2|HIS6_STAEQ -            252    0.0038   16.5   0.0   1   1     5e-06    0.0092   15.2   0.0   167   208    61   100    33   120 0.73 PcrB family
NMO                  PF03060.10   330 sp|Q5HKP2|HIS6_STAEQ -            252     0.011   14.8   0.2   2   2   0.00023      0.42    9.6   0.1   172   230   179   237   145   246 0.73 Nitronate monooxygenase
ThiG                 PF05690.9    247 sp|Q5HKP2|HIS6_STAEQ -            252     0.054   12.5   0.1   1   2   0.00046      0.86    8.6   0.0   165   206    64   105    36   120 0.86 Thiazole biosynthesis protein ThiG
IGPD                 PF00475.13   145 sp|Q5HKN9|HIS7_STAEQ -            192   5.6e-58  194.9   0.3   1   1   9.2e-62   6.8e-58  194.6   0.3     1   145    29   173    29   173 1.00 Imidazoleglycerol-phosphate dehydratase
Pox_J1               PF03338.10   145 sp|Q5HKN9|HIS7_STAEQ -            192     0.079   12.6   0.0   1   1   1.4e-05      0.11   12.2   0.0    37    78    68   110    27   146 0.84 Poxvirus J1 protein
Aminotran_1_2        PF00155.16   363 sp|Q5HR08|HIS8_STAEQ -            351   4.4e-50  170.6   0.0   1   1   1.1e-53   5.5e-50  170.3   0.0     5   357    32   341    29   346 0.89 Aminotransferase class I and II
Aminotran_5          PF00266.14   371 sp|Q5HR08|HIS8_STAEQ -            351   1.7e-06   27.0   0.0   1   1   4.9e-10   2.4e-06   26.5   0.0    47   177    67   190    48   259 0.87 Aminotransferase class-V
Cys_Met_Meta_PP      PF01053.15   386 sp|Q5HR08|HIS8_STAEQ -            351   8.1e-05   21.0   0.0   1   1   2.3e-08   0.00012   20.5   0.0    66   180    75   191    44   198 0.77 Cys/Met metabolism PLP-dependent enzyme
Histidinol_dh        PF00815.15   413 sp|Q5HKN8|HISX_STAEQ -            414  3.5e-133  444.2   7.8   1   1  5.6e-137  4.2e-133  443.9   7.8    13   411    18   413     8   414 0.96 Histidinol dehydrogenase
IKKbetaNEMObind      PF12179.3     38 sp|Q5HKN8|HISX_STAEQ -            414      0.12   12.2   0.1   1   1   4.7e-05      0.35   10.7   0.1     4    21   256   273   254   282 0.92 I-kappa-kinase-beta NEMO binding domain
tRNA-synt_His        PF13393.1    311 sp|Q5HKN6|HISZ_STAEQ -            270     8e-16   57.9   0.1   1   1   1.5e-19   1.1e-15   57.4   0.1    16   296    11   265     4   268 0.81 Histidyl-tRNA synthetase
Hpr_kinase_C         PF07475.7    171 sp|Q5HQW8|HPRK_STAEQ -            310   7.4e-74  246.7   2.6   1   1   3.9e-77   9.7e-74  246.3   2.6     2   171   128   297   127   297 0.99 HPr Serine kinase C-terminal domain
Hpr_kinase_N         PF02603.11   127 sp|Q5HQW8|HPRK_STAEQ -            310     2e-44  150.3   0.1   1   2   1.1e-46   2.6e-43  146.7   0.0     3   127     2   126     1   126 0.98 HPr Serine kinase N terminus
DRTGG                PF07085.7    105 sp|Q5HQW8|HPRK_STAEQ -            310   1.2e-05   24.8   0.0   2   2   9.7e-08   0.00024   20.6   0.0    61   103    80   122    69   124 0.89 DRTGG domain
PucR                 PF07905.6    123 sp|Q5HQW8|HPRK_STAEQ -            310    0.0081   15.7   0.0   1   1   1.5e-05     0.036   13.6   0.0    12   109    13   114     2   118 0.78 Purine catabolism regulatory protein-like family
AAA_18               PF13238.1    129 sp|Q5HQW8|HPRK_STAEQ -            310     0.039   14.2   1.1   1   1   3.4e-05     0.085   13.1   1.1     1    23   147   176   147   273 0.82 AAA domain
AAA_29               PF13555.1     62 sp|Q5HQW8|HPRK_STAEQ -            310     0.093   12.2   0.1   1   1   0.00011      0.27   10.7   0.1    17    37   138   158   129   162 0.77 P-loop containing region of AAA domain
Pribosyltran         PF00156.22   125 sp|Q5HRP4|HPRT_STAEQ -            179   2.5e-20   72.4   0.2   1   1   1.4e-23   3.4e-20   72.0   0.2     1   124     6   127     6   128 0.97 Phosphoribosyl transferase domain
UPRTase              PF14681.1    207 sp|Q5HRP4|HPRT_STAEQ -            179    0.0029   16.8   0.1   1   1   1.7e-06    0.0042   16.3   0.1    68   155    34   125     5   132 0.71 Uracil phosphoribosyltransferase
PRTase_3             PF15610.1    274 sp|Q5HRP4|HPRT_STAEQ -            179     0.038   12.9   0.1   1   1   2.3e-05     0.058   12.3   0.1   135   173    88   127    80   148 0.81 PRTase ComF-like
Helicase_C           PF00271.26    78 sp|Q5HRP4|HPRT_STAEQ -            179     0.075   12.8   0.1   1   1   5.4e-05      0.13   12.1   0.1     9    53    65   111    58   126 0.87 Helicase conserved C-terminal domain
PRTase_2             PF15609.1    191 sp|Q5HRP4|HPRT_STAEQ -            179       0.1   11.8   0.1   1   1   6.2e-05      0.15   11.3   0.1   120   166    90   135    74   152 0.72 Phosphoribosyl transferase
OMPdecase            PF00215.19   226 sp|Q5HRH7|HPS_STAEQ  -            210     3e-32  111.8   7.6   1   1   2.4e-35     4e-32  111.4   7.6     2   225     2   202     1   203 0.92 Orotidine 5'-phosphate decarboxylase / HUMPS family
HMGL-like            PF00682.14   237 sp|Q5HRH7|HPS_STAEQ  -            210   4.4e-07   29.8   0.8   1   2   5.9e-06    0.0098   15.5   0.4     7   104     6   101     3   113 0.79 HMGL-like
HMGL-like            PF00682.14   237 sp|Q5HRH7|HPS_STAEQ  -            210   4.4e-07   29.8   0.8   2   2   2.7e-05     0.045   13.4   0.0     9    70   109   174   101   192 0.86 HMGL-like
Ribul_P_3_epim       PF00834.14   201 sp|Q5HRH7|HPS_STAEQ  -            210   3.4e-05   23.0   3.2   1   1   9.3e-08   0.00015   20.9   3.1    49   200    44   193    24   194 0.79 Ribulose-phosphate 3 epimerase family
Pterin_bind          PF00809.17   210 sp|Q5HRH7|HPS_STAEQ  -            210   0.00052   19.4   1.4   2   2   8.5e-07    0.0014   18.0   0.2    84   166    95   173    89   183 0.81 Pterin binding enzyme
IGPS                 PF00218.16   254 sp|Q5HRH7|HPS_STAEQ  -            210    0.0014   17.7   1.5   1   1   1.3e-06    0.0021   17.1   1.5   120   251    66   200    14   203 0.78 Indole-3-glycerol phosphate synthase
PEP_mutase           PF13714.1    238 sp|Q5HRH7|HPS_STAEQ  -            210    0.0044   16.2   0.2   1   1   5.8e-06    0.0095   15.1   0.2   165   220    74   135    70   142 0.81 Phosphoenolpyruvate phosphomutase
QRPTase_C            PF01729.14   169 sp|Q5HRH7|HPS_STAEQ  -            210     0.023   14.2   4.4   2   2   3.8e-05     0.063   12.7   0.8    65   156    91   188    86   195 0.68 Quinolinate phosphoribosyl transferase, C-terminal domain
PRAI                 PF00697.17   197 sp|Q5HRH7|HPS_STAEQ  -            210     0.072   12.6   3.4   1   1   0.00017      0.27   10.7   3.4    87   179    72   190    64   195 0.54 N-(5'phosphoribosyl)anthranilate (PRA) isomerase
G3P_antiterm         PF04309.7    175 sp|Q5HRH7|HPS_STAEQ  -            210     0.076   12.0   6.1   3   3   0.00042      0.69    8.9   0.2   120   165   161   206   147   209 0.77 Glycerol-3-phosphate responsive antiterminator
HrcA                 PF01628.16   224 sp|Q5HNW4|HRCA_STAEQ -            325   6.9e-38  130.4   7.1   2   2   3.3e-41   6.9e-38  130.4   7.1     4   224   107   318   104   318 0.86 HrcA protein C terminal domain
HrcA_DNA-bdg         PF03444.10    79 sp|Q5HNW4|HRCA_STAEQ -            325   0.00013   21.3   0.2   1   2   2.4e-06    0.0051   16.2   0.0     2    56     2    58     1    70 0.87 Winged helix-turn-helix transcription repressor, HrcA DNA-binding
HTH_DeoR             PF08220.7     57 sp|Q5HNW4|HRCA_STAEQ -            325   0.00016   21.1   0.2   1   2   4.4e-07   0.00093   18.6   0.0    23    48    34    59    31    66 0.95 DeoR-like helix-turn-helix domain
Ribosomal_S19e       PF01090.14   140 sp|Q5HNW4|HRCA_STAEQ -            325    0.0039   16.6   0.0   1   1   3.8e-06     0.008   15.6   0.0    86   126    31    72    20    89 0.83 Ribosomal protein S19e
HTH_11               PF08279.7     55 sp|Q5HNW4|HRCA_STAEQ -            325     0.013   15.1   1.1   1   2   3.5e-05     0.075   12.6   0.0    24    46    34    55    33    62 0.87 HTH domain
HTH_12               PF08461.5     66 sp|Q5HNW4|HRCA_STAEQ -            325     0.013   15.2   0.0   1   1   1.5e-05     0.033   13.9   0.0     3    63     9    71     7    73 0.73 Ribonuclease R winged-helix domain
HEPN                 PF05168.9    118 sp|Q5HNW4|HRCA_STAEQ -            325      0.11   12.3   0.1   1   2   0.00043      0.91    9.4   0.0     7    65    85   143    64   167 0.90 HEPN domain
ABC_tran             PF00005.22   137 sp|Q5HLN4|HRTA_STAEQ -            222   2.6e-32  111.9   0.1   1   1   6.4e-35   3.5e-32  111.5   0.1     1   137    22   170    22   170 0.94 ABC transporter
AAA_21               PF13304.1    303 sp|Q5HLN4|HRTA_STAEQ -            222   3.5e-11   43.5   0.2   1   2   2.9e-05     0.016   15.1   0.6     6    25    39    68    34    98 0.67 AAA domain
AAA_21               PF13304.1    303 sp|Q5HLN4|HRTA_STAEQ -            222   3.5e-11   43.5   0.2   2   2   8.4e-09   4.6e-06   26.7   0.0   231   301   136   204    72   206 0.73 AAA domain
SMC_N                PF02463.14   220 sp|Q5HLN4|HRTA_STAEQ -            222     4e-09   36.0   2.5   1   1   2.6e-11   1.5e-08   34.1   2.5    25   213    33   216    17   221 0.70 RecF/RecN/SMC N terminal domain
AAA_18               PF13238.1    129 sp|Q5HLN4|HRTA_STAEQ -            222   4.1e-05   23.8   0.3   1   2   6.1e-07   0.00034   20.9   0.1     1    42    35    76    35    91 0.87 AAA domain
AAA_15               PF13175.1    415 sp|Q5HLN4|HRTA_STAEQ -            222   9.3e-05   21.6   0.5   1   2   0.00026      0.14   11.1   0.1    17    43    24    71     5   138 0.76 AAA ATPase domain
AAA_15               PF13175.1    415 sp|Q5HLN4|HRTA_STAEQ -            222   9.3e-05   21.6   0.5   2   2   0.00088      0.48    9.4   0.0   371   411   159   201   145   205 0.82 AAA ATPase domain
AAA_13               PF13166.1    712 sp|Q5HLN4|HRTA_STAEQ -            222   0.00018   20.1   0.2   2   2   6.9e-06    0.0038   15.7   0.0   526   580   158   211   150   221 0.83 AAA domain
DUF258               PF03193.11   161 sp|Q5HLN4|HRTA_STAEQ -            222   0.00026   20.2   0.1   1   1   8.2e-07   0.00045   19.4   0.1    19    69    15    66     5    89 0.81 Protein of unknown function, DUF258
CbiA                 PF01656.18   195 sp|Q5HLN4|HRTA_STAEQ -            222    0.0015   17.9   6.0   1   1   5.2e-05     0.029   13.8   6.0     2   155    35   198    34   216 0.57 CobQ/CobB/MinD/ParA nucleotide binding domain
AAA_29               PF13555.1     62 sp|Q5HLN4|HRTA_STAEQ -            222    0.0041   16.6   0.3   1   1   1.5e-05    0.0083   15.6   0.3    17    40    27    49    21    63 0.83 P-loop containing region of AAA domain
AAA_25               PF13481.1    194 sp|Q5HLN4|HRTA_STAEQ -            222    0.0055   16.1   0.4   1   1     2e-05     0.011   15.1   0.4    32    59    31    66    18   200 0.86 AAA domain
T2SE                 PF00437.15   272 sp|Q5HLN4|HRTA_STAEQ -            222    0.0068   15.3   1.5   1   1   1.5e-05     0.008   15.1   0.4   111   155    15    59     5    65 0.79 Type II/IV secretion system protein
AAA_16               PF13191.1    185 sp|Q5HLN4|HRTA_STAEQ -            222    0.0091   16.0   0.8   1   1   5.1e-05     0.028   14.4   0.8    23    51    31    59    19   196 0.69 AAA ATPase domain
UPF0079              PF02367.12   123 sp|Q5HLN4|HRTA_STAEQ -            222    0.0094   15.5   0.1   1   1   3.1e-05     0.017   14.7   0.1    10    40    27    57    12    81 0.81 Uncharacterised P-loop hydrolase UPF0079
NACHT                PF05729.7    166 sp|Q5HLN4|HRTA_STAEQ -            222     0.013   15.1   0.4   1   1   5.5e-05      0.03   13.9   0.2     3    20    35    52    33    65 0.84 NACHT domain
AAA_22               PF13401.1    131 sp|Q5HLN4|HRTA_STAEQ -            222     0.014   15.5   2.1   1   1   0.00042      0.23   11.6   2.1     3    27    31    55    28   207 0.68 AAA domain
AAA_17               PF13207.1    121 sp|Q5HLN4|HRTA_STAEQ -            222     0.019   15.7   0.8   1   1   4.7e-05     0.026   15.3   0.8     2    23    35    56    34   214 0.83 AAA domain
CPT                  PF07931.7    174 sp|Q5HLN4|HRTA_STAEQ -            222     0.037   13.6   0.2   1   1   0.00013     0.072   12.7   0.0     1    23    32    54    32    85 0.89 Chloramphenicol phosphotransferase-like protein
AAA_30               PF13604.1    196 sp|Q5HLN4|HRTA_STAEQ -            222     0.038   13.5   0.2   1   1   0.00028      0.15   11.5   0.0    17    50    31    64    26    72 0.84 AAA domain
AAA_33               PF13671.1    143 sp|Q5HLN4|HRTA_STAEQ -            222     0.039   13.8   0.3   1   1   0.00013     0.074   12.9   0.3     2    39    35    76    34   201 0.81 AAA domain
SbcCD_C              PF13558.1     90 sp|Q5HLN4|HRTA_STAEQ -            222      0.04   13.8   0.1   1   1    0.0004      0.22   11.4   0.1    62    89   158   185   117   186 0.78 Putative exonuclease SbcCD, C subunit
AAA_19               PF13245.1     76 sp|Q5HLN4|HRTA_STAEQ -            222     0.058   13.1   0.0   1   1   0.00023      0.13   12.0   0.0    12    35    34    56    28    83 0.80 Part of AAA domain
AAA_28               PF13521.1    163 sp|Q5HLN4|HRTA_STAEQ -            222      0.06   13.3   0.0   1   1   0.00023      0.12   12.2   0.0     2    21    35    54    34    93 0.76 AAA domain
AAA_23               PF13476.1    202 sp|Q5HLN4|HRTA_STAEQ -            222     0.072   13.4   3.6   1   1   0.00019       0.1   12.8   3.6    14    49    24    62    17   206 0.74 AAA domain
Mg_chelatase         PF01078.16   207 sp|Q5HLN4|HRTA_STAEQ -            222     0.074   12.2   0.0   1   1   0.00036       0.2   10.8   0.0    24    56    34    66    13    90 0.85 Magnesium chelatase, subunit ChlI
VirE                 PF05272.6    198 sp|Q5HLN4|HRTA_STAEQ -            222       0.1   12.0   0.0   1   1   0.00033      0.18   11.2   0.0    48    74    28    54     4    71 0.84 Virulence-associated protein E
MacB_PCD             PF12704.2    232 sp|Q5HLN3|HRTB_STAEQ -            350     4e-17   62.5   1.8   1   3   5.4e-21     4e-17   62.5   1.8     1   214     4   189     4   222 0.79 MacB-like periplasmic core domain
FtsX                 PF02687.16   121 sp|Q5HLN3|HRTB_STAEQ -            350   2.5e-13   49.8  20.1   2   2   3.4e-17   2.5e-13   49.8  20.1     3   121   232   342   230   342 0.94 FtsX-like permease family
EcoR124_C            PF12008.3    270 sp|Q5HK76|HSDR_STAEQ -            930   2.1e-55  187.8  25.1   2   2   1.1e-58   2.1e-55  187.8  25.1     2   270   667   926   666   926 0.97 Type I restriction and modification enzyme - subunit R C terminal
HSDR_N               PF04313.9    194 sp|Q5HK76|HSDR_STAEQ -            930   2.6e-36  125.2   7.3   1   4   1.4e-39   2.6e-36  125.2   7.3     1   192     3   188     3   190 0.87 Type I restriction enzyme R protein N terminus (HSDR_N)
ResIII               PF04851.10   184 sp|Q5HK76|HSDR_STAEQ -            930   1.5e-32  112.8   1.4   1   3   8.3e-36   1.5e-32  112.8   1.4     2   183   239   401   238   402 0.86 Type III restriction enzyme, res subunit
DEAD                 PF00270.24   169 sp|Q5HK76|HSDR_STAEQ -            930   5.8e-12   45.4   0.9   2   3   2.8e-14   5.1e-11   42.3   0.1     2   165   243   403   242   407 0.77 DEAD/DEAH box helicase
AAA_22               PF13401.1    131 sp|Q5HK76|HSDR_STAEQ -            930     0.022   14.9   0.3   1   1   5.7e-05      0.11   12.6   0.0     8   125   264   400   257   405 0.74 AAA domain
DUF3898              PF13037.1     91 sp|Q5HK76|HSDR_STAEQ -            930     0.036   13.9   0.0   1   1   6.2e-05      0.11   12.3   0.0    36    65   208   237   203   247 0.91 Domain of unknown function (DUF3898)
T2SE                 PF00437.15   272 sp|Q5HK76|HSDR_STAEQ -            930       0.1   11.4   0.0   1   1   0.00016      0.29    9.9   0.0   115   196   247   329   200   336 0.77 Type II/IV secretion system protein
HSP33                PF01430.14   280 sp|Q5HRP2|HSLO_STAEQ -            293   5.2e-89  298.0   0.0   1   1     8e-93   5.9e-89  297.8   0.0     1   280     3   282     3   282 0.97 Hsp33 protein
Elf1                 PF05129.8     81 sp|Q5HRP2|HSLO_STAEQ -            293       0.2   11.3   1.0   1   1   6.4e-05      0.47   10.1   1.0    20    65   233   287   225   291 0.73 Transcription elongation factor Elf1 like
AAA_2                PF07724.9    171 sp|Q5HPT8|HSLU_STAEQ -            467   1.3e-42  145.5   5.2   1   2   1.9e-08   1.1e-05   25.3   0.1     5    70    56   121    53   138 0.90 AAA domain (Cdc48 subfamily)
AAA_2                PF07724.9    171 sp|Q5HPT8|HSLU_STAEQ -            467   1.3e-42  145.5   5.2   2   2   7.8e-38   4.6e-35  121.0   1.8    20   171   220   353   198   353 0.89 AAA domain (Cdc48 subfamily)
AAA                  PF00004.24   132 sp|Q5HPT8|HSLU_STAEQ -            467   1.2e-16   61.1   0.6   1   2   9.3e-10   5.5e-07   29.8   0.1     1    95    57   145    57   155 0.80 ATPase family associated with various cellular activities (AAA)
AAA                  PF00004.24   132 sp|Q5HPT8|HSLU_STAEQ -            467   1.2e-16   61.1   0.6   2   2   1.7e-09     1e-06   28.9   0.0    47   131   265   357   234   358 0.79 ATPase family associated with various cellular activities (AAA)
ClpB_D2-small        PF10431.4     81 sp|Q5HPT8|HSLU_STAEQ -            467   1.8e-08   34.1   1.6   1   1     2e-10   1.2e-07   31.5   0.1     1    66   359   433   359   444 0.86 C-terminal, D2-small domain, of ClpB protein
AAA_5                PF07728.9    139 sp|Q5HPT8|HSLU_STAEQ -            467     6e-08   32.5   0.8   1   2   2.4e-08   1.5e-05   24.7   0.0     1    84    56   138    56   153 0.70 AAA domain (dynein-related subfamily)
AAA_16               PF13191.1    185 sp|Q5HPT8|HSLU_STAEQ -            467   3.5e-05   23.8   0.3   1   1     2e-06    0.0012   18.8   0.3    23   118    53   145    40   311 0.59 AAA ATPase domain
G-alpha              PF00503.15   389 sp|Q5HPT8|HSLU_STAEQ -            467   4.9e-05   22.1   2.0   1   1   2.6e-07   0.00015   20.5   2.0    40   216    36   297     9   306 0.75 G-protein alpha subunit
RuvB_N               PF05496.7    234 sp|Q5HPT8|HSLU_STAEQ -            467   6.9e-05   21.9   0.2   1   2   1.7e-05      0.01   14.9   0.0    22    78    16    82     5   121 0.76 Holliday junction DNA helicase ruvB N-terminus
AAA_22               PF13401.1    131 sp|Q5HPT8|HSLU_STAEQ -            467   7.1e-05   22.9   1.4   1   2   1.6e-05    0.0097   16.0   0.0     7    69    57   116    50   149 0.68 AAA domain
AAA_17               PF13207.1    121 sp|Q5HPT8|HSLU_STAEQ -            467   0.00013   22.7   0.1   1   1   9.4e-07   0.00055   20.7   0.0     2    64    57   122    56   156 0.69 AAA domain
Mg_chelatase         PF01078.16   207 sp|Q5HPT8|HSLU_STAEQ -            467   0.00018   20.7   0.0   1   1   2.9e-06    0.0017   17.5   0.0    23    56    55    89    49   106 0.79 Magnesium chelatase, subunit ChlI
Sigma54_activat      PF00158.21   168 sp|Q5HPT8|HSLU_STAEQ -            467   0.00023   20.6   0.3   1   2     6e-05     0.036   13.5   0.0    12    60    44    89    33    93 0.75 Sigma-54 interaction domain
TIP49                PF06068.8    398 sp|Q5HPT8|HSLU_STAEQ -            467   0.00024   19.9   0.1   1   2     4e-07   0.00024   19.9   0.1    11    88     6    90     2   134 0.80 TIP49 C-terminus
AAA_14               PF13173.1    128 sp|Q5HPT8|HSLU_STAEQ -            467   0.00065   19.5   0.3   2   2   0.00092      0.54   10.1   0.1    30   124   246   361   223   365 0.51 AAA domain
Zeta_toxin           PF06414.7    201 sp|Q5HPT8|HSLU_STAEQ -            467    0.0014   17.8   0.0   1   1   4.8e-06    0.0028   16.7   0.0     4    54    43    91    40   145 0.77 Zeta toxin
MCM                  PF00493.18   331 sp|Q5HPT8|HSLU_STAEQ -            467    0.0024   16.7   6.3   1   2   1.8e-05     0.011   14.5   0.1    17    82    12    79     6   139 0.82 MCM2/3/5 family
AAA_33               PF13671.1    143 sp|Q5HPT8|HSLU_STAEQ -            467     0.014   15.2   0.1   1   1   9.3e-05     0.055   13.3   0.0     2    33    57    98    57   154 0.65 AAA domain
DEAD                 PF00270.24   169 sp|Q5HPT8|HSLU_STAEQ -            467     0.015   14.7   1.2   1   2   0.00069      0.41   10.1   0.0    14    32    54    72    42    89 0.84 DEAD/DEAH box helicase
IstB_IS21            PF01695.12   178 sp|Q5HPT8|HSLU_STAEQ -            467     0.016   14.6   0.0   1   1     7e-05     0.041   13.2   0.0    48    68    55    75    40    80 0.89 IstB-like ATP binding protein
TrwB_AAD_bind        PF10412.4    386 sp|Q5HPT8|HSLU_STAEQ -            467     0.016   13.8   1.5   1   2    0.0016      0.95    8.0   0.0    12    37    51    76    45    80 0.86 Type IV secretion-system coupling protein DNA-binding domain
AAA_18               PF13238.1    129 sp|Q5HPT8|HSLU_STAEQ -            467      0.02   15.1   0.1   1   1   3.4e-05      0.02   15.1   0.1     1    59    57   111    57   149 0.62 AAA domain
IPT                  PF01745.11   233 sp|Q5HPT8|HSLU_STAEQ -            467     0.054   12.6   0.0   1   1   0.00018      0.11   11.6   0.0     5    32    58    85    54    92 0.90 Isopentenyl transferase
AAA_28               PF13521.1    163 sp|Q5HPT8|HSLU_STAEQ -            467     0.058   13.3   0.7   1   1    0.0009      0.53   10.2   0.0     2    67    57   122    56   136 0.78 AAA domain
ResIII               PF04851.10   184 sp|Q5HPT8|HSLU_STAEQ -            467      0.16   11.7   5.5   1   2   0.00055      0.32   10.7   0.0    16    48    47    76    23    90 0.76 Type III restriction enzyme, res subunit
Proteasome           PF00227.21   190 sp|Q5HPT9|HSLV_STAEQ -            180   3.4e-25   88.4   0.5   1   1   9.7e-29   4.8e-25   87.9   0.5     3   189     6   179     4   180 0.97 Proteasome subunit
DUF3419              PF11899.3    380 sp|Q5HPT9|HSLV_STAEQ -            180     0.032   12.9   0.1   1   1   1.1e-05     0.054   12.2   0.1    33    79   121   165   120   169 0.93 Protein of unknown function (DUF3419)
TSKS                 PF15358.1    558 sp|Q5HPT9|HSLV_STAEQ -            180     0.054   11.6   0.3   1   1   1.2e-05      0.06   11.4   0.3   311   362    55   106    10   120 0.83 Testis-specific serine kinase substrate
Trypsin_2            PF13365.1    120 sp|Q5HQE2|HTRAL_STAEQ -            585   1.1e-16   60.8   0.6   1   1   1.4e-19   2.9e-16   59.5   0.6     1   120   301   449   301   449 0.78 Trypsin-like peptidase domain
PDZ_2                PF13180.1     82 sp|Q5HQE2|HTRAL_STAEQ -            585   7.1e-12   45.0   1.7   1   1   3.4e-15   7.1e-12   45.0   1.7    13    82   514   584   491   584 0.92 PDZ domain
Trypsin              PF00089.21   220 sp|Q5HQE2|HTRAL_STAEQ -            585   1.1e-09   38.2   0.3   1   1     5e-13   1.1e-09   38.2   0.3    36   218   314   473   288   475 0.75 Trypsin
PDZ                  PF00595.19    81 sp|Q5HQE2|HTRAL_STAEQ -            585   1.5e-05   25.1   0.8   1   1   2.2e-08   4.7e-05   23.4   0.8    23    59   507   549   489   557 0.83 PDZ domain (Also known as DHR or GLGF)
CBS                  PF00571.23    57 sp|Q5HQE2|HTRAL_STAEQ -            585     0.073   12.8   0.0   1   1   7.7e-05      0.16   11.7   0.0    34    49   438   453   412   453 0.86 CBS domain
Chordopox_A13L       PF05961.6     68 sp|Q5HQE2|HTRAL_STAEQ -            585      0.37   10.7   0.1   1   1   0.00017      0.37   10.7   0.1     6    42   224   261   223   271 0.84 Chordopoxvirus A13L protein
Arginase             PF00491.16   278 sp|Q5HLR4|HUTG_STAEQ -            311   5.6e-48  163.6   0.2   1   1   8.7e-52   6.5e-48  163.4   0.2     2   276    45   310    44   311 0.88 Arginase family
SIS_2                PF13580.1    138 sp|Q5HLR4|HUTG_STAEQ -            311     0.015   15.0   0.1   1   1   8.2e-06     0.061   13.0   0.1    23   123   108   202   101   210 0.69 SIS domain
Glyco_tranf_2_3      PF13641.1    228 sp|Q5HKQ0|ICAA_STAEQ -            412   1.5e-35  123.1   0.0   1   1   1.1e-38   1.9e-35  122.7   0.0     3   228    49   270    47   270 0.94 Glycosyltransferase like family 2
Glycos_transf_2      PF00535.21   169 sp|Q5HKQ0|ICAA_STAEQ -            412   4.5e-33  114.3   0.2   1   1   4.4e-36   7.3e-33  113.6   0.2     2   169    51   217    50   217 0.97 Glycosyl transferase family 2
Glyco_trans_2_3      PF13632.1    193 sp|Q5HKQ0|ICAA_STAEQ -            412   1.4e-25   90.1   3.6   1   1   3.1e-28   5.1e-25   88.3   3.6     1   191   129   314   129   388 0.82 Glycosyl transferase family group 2
Glyco_transf_21      PF13506.1    175 sp|Q5HKQ0|ICAA_STAEQ -            412   1.9e-16   59.8   0.0   1   1   1.7e-19   2.8e-16   59.3   0.0    14   175   109   269   101   269 0.88 Glycosyl transferase family 21
Chitin_synth_2       PF03142.10   527 sp|Q5HKQ0|ICAA_STAEQ -            412     2e-16   59.5   5.2   1   3   5.5e-05      0.09   11.1   0.0    26   109    48   124    26   125 0.74 Chitin synthase
Chitin_synth_2       PF03142.10   527 sp|Q5HKQ0|ICAA_STAEQ -            412     2e-16   59.5   5.2   2   3     3e-15   4.9e-12   45.0   0.0   182   305   107   228    93   235 0.87 Chitin synthase
Glyco_tranf_2_2      PF10111.4    281 sp|Q5HKQ0|ICAA_STAEQ -            412   1.7e-08   33.8   0.2   1   1   1.8e-11     3e-08   33.1   0.2     6   120    55   155    50   252 0.76 Glycosyltransferase like family 2
Glyco_tranf_2_5      PF13712.1    217 sp|Q5HKQ0|ICAA_STAEQ -            412   6.1e-07   28.8   0.2   2   2   3.1e-08   5.2e-05   22.5   0.0    32   117   104   182    95   225 0.80 Glycosyltransferase like family
Glyco_tranf_2_4      PF13704.1     97 sp|Q5HKQ0|ICAA_STAEQ -            412   0.00013   22.2   0.0   1   1   1.5e-07   0.00024   21.3   0.0     1    83    56   138    56   144 0.78 Glycosyl transferase family 2
NAD_binding_2        PF03446.10   163 sp|Q5HKQ0|ICAA_STAEQ -            412      0.09   12.6   0.0   1   1   8.6e-05      0.14   11.9   0.0    48   129    39   119    28   123 0.80 NAD binding domain of 6-phosphogluconate dehydrogenase
Polysacc_deac_1      PF01522.16   124 sp|Q5HKP8|ICAB_STAEQ -            289   5.2e-26   90.6   0.0   1   1   1.7e-29   8.2e-26   90.0   0.0     2   123   108   247   107   248 0.96 Polysaccharide deacetylase
DUF3530              PF12048.3    310 sp|Q5HKP8|ICAB_STAEQ -            289     0.069   12.1   0.1   1   1   2.3e-05      0.12   11.3   0.1     6    78    11    99     6   107 0.77 Protein of unknown function (DUF3530)
DUF1330              PF07045.6     65 sp|Q5HKP8|ICAB_STAEQ -            289      0.12   12.2   0.0   1   1     5e-05      0.25   11.2   0.0    13    51    86   124    80   126 0.94 Protein of unknown function (DUF1330)
Acyl_transf_3        PF01757.17   340 sp|Q5HKP7|ICAC_STAEQ -            355   9.2e-20   70.7  49.4   1   1   8.4e-24   1.3e-19   70.3  49.4     6   336    10   322     6   326 0.82 Acyltransferase family
DDDD                 PF10161.4     80 sp|Q5HKP9|ICAD_STAEQ -            101     0.039   13.5   0.8   1   1   8.5e-06     0.042   13.4   0.1    36    64    26    54     5    58 0.87 Putative mitochondrial precursor protein
EI24                 PF07264.6    219 sp|Q5HKP9|ICAD_STAEQ -            101     0.097   12.0   7.6   1   1   2.4e-05      0.12   11.7   7.6    25    87    24    92    20    95 0.78 Etoposide-induced protein 2.4 (EI24)
DUF1129              PF06570.6    206 sp|Q5HKP9|ICAD_STAEQ -            101       8.3    5.6  10.6   1   2   4.1e-05       0.2   10.9   2.7   145   188    17    61     1    70 0.86 Protein of unknown function (DUF1129)
Iso_dh               PF00180.15   348 sp|Q5HNL1|IDH_STAEQ  -            422  4.7e-121  403.9   0.0   1   1  4.5e-125  6.7e-121  403.4   0.0     2   347    21   416    20   417 0.98 Isocitrate/isopropylmalate dehydrogenase
FMN_dh               PF01070.13   357 sp|Q5HLP8|IDI2_STAEQ -            349     3e-27   95.4   0.1   1   2   1.6e-08   4.8e-05   22.3   0.1    27   153    25   159    13   167 0.82 FMN-dependent dehydrogenase
FMN_dh               PF01070.13   357 sp|Q5HLP8|IDI2_STAEQ -            349     3e-27   95.4   0.1   2   2   1.6e-23   4.9e-20   71.6   0.0   212   353   166   327   155   331 0.94 FMN-dependent dehydrogenase
Glu_synthase         PF01645.12   368 sp|Q5HLP8|IDI2_STAEQ -            349   2.2e-08   33.4   0.0   2   2   1.4e-10     4e-07   29.2   0.0   175   305   150   285   122   291 0.71 Conserved region in glutamate synthase
DeoC                 PF01791.4    236 sp|Q5HLP8|IDI2_STAEQ -            349    0.0043   16.3   0.0   1   1   2.6e-06    0.0076   15.5   0.0    75   228   127   283    90   286 0.79 DeoC/LacD family aldolase
IMPDH                PF00478.20   352 sp|Q5HLP8|IDI2_STAEQ -            349    0.0095   14.8   0.2   2   2   2.5e-05     0.075   11.9   0.0   211   250   254   293   237   302 0.79 IMP dehydrogenase / GMP reductase domain
ThiG                 PF05690.9    247 sp|Q5HLP8|IDI2_STAEQ -            349     0.074   12.1   0.0   1   2   0.00029      0.85    8.6   0.0   164   199   169   206   135   211 0.85 Thiazole biosynthesis protein ThiG
eIF-1a               PF01176.14    65 sp|Q5HM21|IF1_STAEQ  -             72   7.9e-29   98.8   0.0   1   1   1.2e-32   8.7e-29   98.7   0.0     2    65     6    70     5    70 0.98 Translation initiation factor 1A / IF-1
TOBE_2               PF08402.5     75 sp|Q5HM21|IF1_STAEQ  -             72     0.046   13.7   0.0   1   1   9.8e-06     0.073   13.0   0.0    34    72    22    62     3    63 0.90 TOBE domain
GTP_EFTU             PF00009.22   188 sp|Q5HPS2|IF2_STAEQ  -            720     1e-43  148.9   1.2   1   1   1.2e-45   8.4e-43  145.9   1.2     5   183   226   382   222   387 0.94 Elongation factor Tu GTP binding domain
IF-2                 PF11987.3    109 sp|Q5HPS2|IF2_STAEQ  -            720   9.2e-40  134.9   3.5   1   1   1.3e-42   9.2e-40  134.9   3.5     2   108   506   612   505   613 0.98 Translation-initiation factor 2
IF2_N                PF04760.10    54 sp|Q5HPS2|IF2_STAEQ  -            720   1.5e-35  120.5  11.3   1   2   1.5e-19   1.1e-16   60.2   4.4     1    52     1    51     1    53 0.97 Translation initiation factor IF-2, N-terminal region
IF2_N                PF04760.10    54 sp|Q5HPS2|IF2_STAEQ  -            720   1.5e-35  120.5  11.3   2   2   1.5e-20     1e-17   63.4   0.6     2    54   145   195   144   195 0.97 Translation initiation factor IF-2, N-terminal region
GTP_EFTU_D2          PF03144.20    74 sp|Q5HPS2|IF2_STAEQ  -            720   2.5e-11   43.5   4.0   1   2   2.3e-09   1.6e-06   28.0   0.2     4    73   415   474   412   475 0.90 Elongation factor Tu domain 2
GTP_EFTU_D2          PF03144.20    74 sp|Q5HPS2|IF2_STAEQ  -            720   2.5e-11   43.5   4.0   2   2   2.6e-05     0.019   15.0   0.6     1    73   643   710   643   711 0.94 Elongation factor Tu domain 2
MMR_HSR1             PF01926.18   116 sp|Q5HPS2|IF2_STAEQ  -            720   9.5e-09   35.2   0.3   1   1   4.8e-11   3.4e-08   33.4   0.3     2   116   227   332   226   332 0.76 50S ribosome-binding GTPase
Miro                 PF08477.8    119 sp|Q5HPS2|IF2_STAEQ  -            720   4.2e-06   27.2   0.1   1   1     6e-09   4.2e-06   27.2   0.1     2   119   227   334   226   334 0.90 Miro-like protein
FeoB_N               PF02421.13   156 sp|Q5HPS2|IF2_STAEQ  -            720   2.6e-05   23.5   0.3   1   1   1.3e-07   9.4e-05   21.7   0.3     3   125   227   343   225   381 0.76 Ferrous iron transport protein B
PduV-EutP            PF10662.4    143 sp|Q5HPS2|IF2_STAEQ  -            720   0.00038   19.9   0.1   1   1   2.1e-06    0.0015   18.0   0.1     4   141   227   381   225   383 0.64 Ethanolamine utilisation - propanediol utilisation
Neur_chan_memb       PF02932.11   237 sp|Q5HPS2|IF2_STAEQ  -            720    0.0017   18.3   4.8   1   1   3.3e-06    0.0024   17.8   4.8   106   188    49   136    26   335 0.72 Neurotransmitter-gated ion-channel transmembrane region
GTP_EFTU_D4          PF14578.1     81 sp|Q5HPS2|IF2_STAEQ  -            720     0.015   14.9   4.2   2   2    0.0001     0.073   12.7   1.9     4    80   628   711   625   712 0.90 Elongation factor Tu domain 4
MobB                 PF03205.9    140 sp|Q5HPS2|IF2_STAEQ  -            720     0.022   14.4   1.7   1   2   0.00017      0.12   12.0   0.4     2    49   226   271   225   305 0.82 Molybdopterin guanine dinucleotide synthesis protein B
Mem_trans            PF03547.13   385 sp|Q5HPS2|IF2_STAEQ  -            720     0.039   12.2   1.8   1   1   6.8e-05     0.048   11.9   1.8   152   231    58   139    34   395 0.77 Membrane transport protein
PIH1                 PF08190.7    328 sp|Q5HPS2|IF2_STAEQ  -            720     0.041   13.3  20.1   1   1   9.6e-05     0.068   12.6  20.1   137   303    37   199    18   217 0.54 pre-RNA processing PIH1/Nop17
HTH_11               PF08279.7     55 sp|Q5HPS2|IF2_STAEQ  -            720     0.055   13.1   0.2   1   1    0.0012      0.86    9.2   0.0    13    35   144   166   141   170 0.81 HTH domain
Ndc1_Nup             PF09531.5    602 sp|Q5HPS2|IF2_STAEQ  -            720      0.64    8.3  21.5   1   1    0.0013      0.92    7.8  21.5   342   457    18   138    17   183 0.72 Nucleoporin protein Ndc1-Nup
IF3_C                PF00707.17    88 sp|Q5HNM3|IF3_STAEQ  -            175   1.4e-37  127.2   0.8   1   1   9.2e-41   3.4e-37  126.0   0.8     2    87    87   172    86   173 0.98 Translation initiation factor IF-3, C-terminal domain
IF3_N                PF05198.11    76 sp|Q5HNM3|IF3_STAEQ  -            175   1.7e-33  114.3   2.8   1   1   7.6e-37   2.8e-33  113.6   2.8     1    76     6    81     6    81 0.98 Translation initiation factor IF-3, N-terminal domain
NTP_transf_2         PF01909.18    93 sp|Q5HNM3|IF3_STAEQ  -            175     0.071   13.4   0.0   1   1   3.5e-05      0.13   12.6   0.0    29    87    42   114    38   120 0.73 Nucleotidyltransferase domain
PALP                 PF00291.20   306 sp|Q5HMF5|ILVA_STAEQ -            422   7.9e-75  251.9   0.2   1   1   2.8e-78     1e-74  251.5   0.2     4   306    22   316    19   316 0.87 Pyridoxal-phosphate dependent enzyme
Thr_dehydrat_C       PF00585.13    91 sp|Q5HMF5|ILVA_STAEQ -            422   4.4e-20   71.0   0.0   1   1   2.2e-23   8.3e-20   70.1   0.0     1    91   329   421   329   421 0.96 C-terminal regulatory domain of Threonine dehydratase
DNA_pol_A_exo1       PF01612.15   176 sp|Q5HMF5|ILVA_STAEQ -            422     0.023   14.1   0.2   2   2   2.4e-05      0.09   12.2   0.1    44   136   265   368   251   389 0.78 3'-5' exonuclease
DUF1957              PF09210.6    102 sp|Q5HMF5|ILVA_STAEQ -            422      0.14   12.2   0.2   1   1   0.00011       0.4   10.7   0.0    52    97   139   184   136   188 0.90 Domain of unknown function (DUF1957)
IlvN                 PF07991.7    165 sp|Q5HMG0|ILVC_STAEQ -            334   6.8e-77  256.4   0.4   1   1   1.3e-79     1e-76  255.9   0.4     2   165    15   177    14   177 0.99 Acetohydroxy acid isomeroreductase, catalytic domain
IlvC                 PF01450.14   145 sp|Q5HMG0|ILVC_STAEQ -            334     1e-55  187.6   0.2   1   1   1.8e-58   1.4e-55  187.1   0.2     1   144   183   327   183   328 0.99 Acetohydroxy acid isomeroreductase, catalytic domain
NAD_binding_2        PF03446.10   163 sp|Q5HMG0|ILVC_STAEQ -            334     8e-08   32.2   0.0   1   1   1.8e-10   1.4e-07   31.4   0.0     2    90    18   103    17   114 0.88 NAD binding domain of 6-phosphogluconate dehydrogenase
2-Hacid_dh_C         PF02826.14   178 sp|Q5HMG0|ILVC_STAEQ -            334   1.3e-07   30.9   0.0   1   1   2.8e-10   2.2e-07   30.1   0.0    27   100     8    81     2    93 0.88 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain
F420_oxidored        PF03807.12    96 sp|Q5HMG0|ILVC_STAEQ -            334   4.5e-07   30.2   0.0   1   1   1.2e-09     9e-07   29.2   0.0     1    79    19    90    19   102 0.80 NADP oxidoreductase coenzyme F420-dependent
AdoHcyase_NAD        PF00670.16   162 sp|Q5HMG0|ILVC_STAEQ -            334   1.3e-06   28.3   0.1   1   1   3.4e-09   2.6e-06   27.3   0.1    19    83    13    77     8    89 0.87 S-adenosyl-L-homocysteine hydrolase, NAD binding domain
ApbA                 PF02558.11   151 sp|Q5HMG0|ILVC_STAEQ -            334   7.6e-05   22.1   0.0   1   1   1.9e-07   0.00015   21.2   0.0     1    78    20    83    20   131 0.78 Ketopantoate reductase PanE/ApbA
NAD_Gly3P_dh_N       PF01210.18   157 sp|Q5HMG0|ILVC_STAEQ -            334   0.00026   20.7   0.0   1   3   5.1e-05      0.04   13.6   0.0     1    27    19    45    19    59 0.92 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus
CoA_binding          PF02629.14    96 sp|Q5HMG0|ILVC_STAEQ -            334   0.00026   21.4   0.1   1   1   1.2e-06   0.00095   19.6   0.1     4    74    18    84    16    96 0.80 CoA binding domain
NAD_binding_10       PF13460.1    183 sp|Q5HMG0|ILVC_STAEQ -            334    0.0068   16.4   0.0   1   1   1.7e-05     0.013   15.4   0.0     1    70    20    82    20   127 0.89 NADH(P)-binding
DUF1103              PF06513.6    215 sp|Q5HMG0|ILVC_STAEQ -            334    0.0073   15.7   0.0   1   1   2.1e-05     0.016   14.5   0.0    87   117   251   281   220   300 0.73 Repeat of unknown function (DUF1103)
CoA_binding_2        PF13380.1    116 sp|Q5HMG0|ILVC_STAEQ -            334     0.025   14.7   0.0   1   1   7.5e-05     0.058   13.5   0.0     1    73    18    90    18    95 0.74 CoA binding domain
Oxidored_nitro       PF00148.14   398 sp|Q5HMG0|ILVC_STAEQ -            334     0.026   13.1   0.0   1   1   5.4e-05     0.042   12.4   0.0   265   301    11    47     3   112 0.79 Nitrogenase component 1 type Oxidoreductase
TrkA_N               PF02254.13   116 sp|Q5HMG0|ILVC_STAEQ -            334     0.033   14.1   0.0   1   1   8.6e-05     0.067   13.1   0.0     1    50    20    70    20    84 0.81 TrkA-N domain
EFG_IV               PF03764.13   120 sp|Q5HMG0|ILVC_STAEQ -            334     0.033   13.7   0.3   1   1   0.00024      0.19   11.2   0.0    48    82    81   115    57   119 0.88 Elongation factor G, domain IV
FMO-like             PF00743.14   532 sp|Q5HMG0|ILVC_STAEQ -            334     0.069   11.3   0.0   1   1   0.00013       0.1   10.7   0.0   178   265    12    99     4   117 0.85 Flavin-binding monooxygenase-like
MRC1                 PF09444.5    145 sp|Q5HMG0|ILVC_STAEQ -            334     0.093   13.0   0.6   1   1    0.0002      0.15   12.3   0.6    73   118   273   321   269   333 0.84 MRC1-like domain
3HCDH_N              PF02737.13   180 sp|Q5HMG0|ILVC_STAEQ -            334     0.098   12.3   0.1   1   1   0.00028      0.22   11.1   0.1     1    39    19    57    19    80 0.83 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain
GFO_IDH_MocA         PF01408.17   120 sp|Q5HMG0|ILVC_STAEQ -            334      0.12   12.9   0.0   1   1   0.00026       0.2   12.1   0.0     2    77    19    87    18    98 0.79 Oxidoreductase family, NAD-binding Rossmann fold
ILVD_EDD             PF00920.16   521 sp|Q5HMG3|ILVD_STAEQ -            562  4.9e-214  711.5   0.5   1   1  7.4e-218  5.5e-214  711.4   0.5     1   520    33   552    33   553 0.99 Dehydratase family
adh_short_C2         PF13561.1    241 sp|Q5HMG3|ILVD_STAEQ -            562    0.0067   16.2   0.0   1   1   1.5e-06     0.011   15.5   0.0    19   118   217   320   211   337 0.81 Enoyl-(Acyl carrier protein) reductase
Aminotran_4          PF01063.14   231 sp|Q5HRJ8|ILVE_STAEQ -            358   3.2e-31  108.5   0.0   1   1   2.8e-35   4.1e-31  108.2   0.0     1   229    85   335    85   337 0.87 Aminotransferase class IV
IMPDH                PF00478.20   352 sp|Q5HRX2|IMDH_STAEQ -            488  2.1e-151  503.8   3.0   1   1  1.6e-154  2.4e-151  503.6   3.0     2   352    10   475     9   475 0.99 IMP dehydrogenase / GMP reductase domain
CBS                  PF00571.23    57 sp|Q5HRX2|IMDH_STAEQ -            488   2.5e-23   81.6   0.2   1   2     3e-12   4.5e-09   35.9   0.0     8    52    98   144    92   146 0.91 CBS domain
CBS                  PF00571.23    57 sp|Q5HRX2|IMDH_STAEQ -            488   2.5e-23   81.6   0.2   2   2   2.1e-14   3.1e-11   42.8   0.1     1    54   153   206   153   208 0.95 CBS domain
NMO                  PF03060.10   330 sp|Q5HRX2|IMDH_STAEQ -            488   3.6e-10   39.5  14.5   1   2     4e-08   5.9e-05   22.3   0.0     4    59    36    90    33   115 0.80 Nitronate monooxygenase
NMO                  PF03060.10   330 sp|Q5HRX2|IMDH_STAEQ -            488   3.6e-10   39.5  14.5   2   2     4e-06    0.0059   15.7  12.1   126   229   263   373   213   385 0.80 Nitronate monooxygenase
FMN_dh               PF01070.13   357 sp|Q5HRX2|IMDH_STAEQ -            488   2.1e-05   23.5   6.4   1   1   4.4e-08   6.6e-05   21.9   5.7   242   329   239   380   224   399 0.60 FMN-dependent dehydrogenase
Aldolase             PF01081.14   196 sp|Q5HRX2|IMDH_STAEQ -            488    0.0036   16.4   3.0   1   1   5.2e-06    0.0077   15.4   2.5     7    84   217   297   212   322 0.83 KDPG and KHG aldolase
Glu_synthase         PF01645.12   368 sp|Q5HRX2|IMDH_STAEQ -            488     0.033   13.1   5.5   1   1     4e-05     0.059   12.2   5.5   194   304   260   364   251   367 0.74 Conserved region in glutamate synthase
DeoC                 PF01791.4    236 sp|Q5HRX2|IMDH_STAEQ -            488     0.091   12.0   7.2   2   2   3.7e-05     0.054   12.7   4.3   147   222   281   357   260   368 0.74 DeoC/LacD family aldolase
B12-binding          PF02310.14   121 sp|Q5HRX2|IMDH_STAEQ -            488      0.15   11.9   4.4   1   2   0.00012      0.18   11.6   0.5    45   113   237   302   220   308 0.80 B12 binding domain
Transglycosylas      PF06737.9     77 sp|Q5HL49|ISAA_STAEQ -            235   9.9e-07   28.9   3.7   1   1     2e-10   9.9e-07   28.9   3.7     3    75   174   234   172   235 0.91 Transglycosylase-like domain
SLT                  PF01464.15   121 sp|Q5HL49|ISAA_STAEQ -            235   1.1e-05   24.9   0.1   1   1   6.1e-09     3e-05   23.4   0.1     4    50   165   207   162   233 0.83 Transglycosylase SLT domain
Macoilin             PF09726.4    697 sp|Q5HL49|ISAA_STAEQ -            235      0.64    8.2  11.8   1   1   0.00015      0.72    8.0  11.8   270   402    41   170    15   223 0.48 Transmembrane protein
IspD                 PF01128.14   221 sp|Q5HRJ7|ISPD_STAEQ -            238   1.7e-46  158.5   0.0   1   1   6.4e-50   1.9e-46  158.3   0.0     5   220     6   232     2   233 0.93 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase
NTP_transf_3         PF12804.2    160 sp|Q5HRJ7|ISPD_STAEQ -            238   8.8e-10   38.8   0.0   1   1     4e-13   1.2e-09   38.4   0.0     3   114     6   132     4   170 0.71 MobA-like NTP transferase domain
NTP_transferase      PF00483.18   248 sp|Q5HRJ7|ISPD_STAEQ -            238   2.1e-05   23.9   0.0   1   1   1.1e-08   3.2e-05   23.3   0.0     4   135     6   135     3   144 0.81 Nucleotidyl transferase
CTP_transf_3         PF02348.14   217 sp|Q5HRJ7|ISPD_STAEQ -            238   0.00062   19.4   0.5   1   1   8.6e-07    0.0025   17.4   0.5    16   119    22   134    14   153 0.75 Cytidylyltransferase
DUF4126              PF13548.1    177 sp|Q5HRJ7|ISPD_STAEQ -            238     0.078   12.4   0.1   1   2   0.00013      0.37   10.1   0.0    16    48     2    34     1    44 0.91 Domain of unknown function (DUF4126)
GHMP_kinases_C       PF08544.8     85 sp|Q5HRR0|ISPE_STAEQ -            282   1.1e-13   51.2   0.0   2   2   4.6e-17   3.4e-13   49.5   0.0     3    83   198   272   196   274 0.94 GHMP kinases C terminal
GHMP_kinases_N       PF00288.21    67 sp|Q5HRR0|ISPE_STAEQ -            282   2.5e-10   40.2   0.2   1   1   6.5e-14   4.9e-10   39.3   0.2     1    65    85   141    85   143 0.87 GHMP kinases N terminal domain
Prenyltransf         PF01255.14   223 sp|Q5HPT1|ISPT_STAEQ -            256   3.6e-76  255.1   0.0   1   1   3.2e-80   4.7e-76  254.8   0.0     1   222    31   251    31   252 0.99 Putative undecaprenyl diphosphate synthase
ADK                  PF00406.17   151 sp|Q5HM20|KAD_STAEQ  -            215   7.2e-60  201.2   0.0   1   1   5.2e-63   8.5e-60  201.0   0.0     1   150     5   190     5   191 0.99 Adenylate kinase
ADK_lid              PF05191.9     36 sp|Q5HM20|KAD_STAEQ  -            215   5.9e-19   67.4   1.4   1   1   6.2e-22     1e-18   66.6   1.4     1    36   127   162   127   162 0.99 Adenylate kinase, active site lid
AAA_17               PF13207.1    121 sp|Q5HM20|KAD_STAEQ  -            215   6.2e-08   33.4   0.1   1   1   5.7e-11   9.4e-08   32.9   0.1     2   105     3   122     2   166 0.65 AAA domain
AAA_33               PF13671.1    143 sp|Q5HM20|KAD_STAEQ  -            215   3.7e-07   30.1   0.0   1   1   3.5e-10   5.8e-07   29.4   0.0     2   119     3   128     3   136 0.77 AAA domain
AAA_18               PF13238.1    129 sp|Q5HM20|KAD_STAEQ  -            215   7.1e-06   26.3   0.1   1   1   1.1e-08   1.8e-05   25.0   0.1     1   113     3   128     3   132 0.64 AAA domain
Zeta_toxin           PF06414.7    201 sp|Q5HM20|KAD_STAEQ  -            215    0.0033   16.5   0.0   1   1     3e-06     0.005   15.9   0.0    19   133     3   118     1   132 0.79 Zeta toxin
HSP33                PF01430.14   280 sp|Q5HM20|KAD_STAEQ  -            215    0.0061   15.7   0.1   1   1   7.5e-06     0.012   14.7   0.1   136   219    43   125    37   141 0.90 Hsp33 protein
Thymidylate_kin      PF02223.12   186 sp|Q5HM20|KAD_STAEQ  -            215     0.013   14.9   0.3   1   3    0.0002      0.32   10.3   0.0     3    51     7    57     5    74 0.82 Thymidylate kinase
KTI12                PF08433.5    270 sp|Q5HM20|KAD_STAEQ  -            215     0.036   13.2   0.0   1   2   0.00013      0.21   10.7   0.0     4    28     3    33     1    75 0.74 Chromatin associated protein KTI12
Cytidylate_kin       PF02224.13   158 sp|Q5HP68|KCY_STAEQ  -            215   1.3e-50  170.9   3.0   1   1   1.8e-53   1.8e-50  170.4   3.0     5   157    59   212    56   213 0.94 Cytidylate kinase
AAA_17               PF13207.1    121 sp|Q5HP68|KCY_STAEQ  -            215   2.4e-12   47.7   0.9   1   1   4.6e-14   4.6e-11   43.6   0.8     2   119     6   128     5   200 0.67 AAA domain
Cytidylate_kin2      PF13189.1    179 sp|Q5HP68|KCY_STAEQ  -            215   8.2e-08   32.3   3.1   1   1   1.6e-10   1.6e-07   31.3   3.1     2   155     6   178     5   187 0.79 Cytidylate kinase-like family
AAA_18               PF13238.1    129 sp|Q5HP68|KCY_STAEQ  -            215   2.3e-07   31.1   0.4   1   1   6.7e-10   6.6e-07   29.6   0.4     1   121     6   167     6   186 0.68 AAA domain
SKI                  PF01202.17   158 sp|Q5HP68|KCY_STAEQ  -            215   4.6e-06   26.5   0.3   1   2   7.8e-06    0.0077   16.1   0.0     2    24    13    35    12    54 0.89 Shikimate kinase
AAA_33               PF13671.1    143 sp|Q5HP68|KCY_STAEQ  -            215   0.00026   20.8   1.0   1   1   1.4e-06    0.0014   18.5   0.9     4    44     8    52     6   182 0.76 AAA domain
ADK                  PF00406.17   151 sp|Q5HP68|KCY_STAEQ  -            215    0.0096   15.8   0.0   1   1   1.8e-05     0.018   14.9   0.0     3    43    10    50     8    82 0.87 Adenylate kinase
AAA_14               PF13173.1    128 sp|Q5HP68|KCY_STAEQ  -            215     0.026   14.4   0.2   1   1   5.3e-05     0.053   13.4   0.0     4    69     5    79     2   116 0.63 AAA domain
Wbp11                PF09429.5     78 sp|Q5HP68|KCY_STAEQ  -            215     0.031   14.2   1.2   1   1   6.6e-05     0.065   13.2   1.2     9    63   147   202   141   212 0.82 WW domain binding protein 11
AAA_19               PF13245.1     76 sp|Q5HP68|KCY_STAEQ  -            215     0.052   13.3   0.0   1   1   0.00011      0.11   12.2   0.0    14    35     7    27     2    77 0.79 Part of AAA domain
NTPase_1             PF03266.10   168 sp|Q5HP68|KCY_STAEQ  -            215     0.053   13.2   0.0   1   1   8.1e-05      0.08   12.6   0.0     2    58     6    65     5   124 0.80 NTPase
ABC_tran             PF00005.22   137 sp|Q5HP68|KCY_STAEQ  -            215      0.11   12.8   0.5   1   1   0.00069      0.68   10.2   0.5    14    80     6   155     2   199 0.68 ABC transporter
Kinase-PPPase        PF03618.9    255 sp|Q5HP68|KCY_STAEQ  -            215      0.21   11.0   3.3   2   2   0.00034      0.34   10.3   2.0   201   255   149   212   138   212 0.74 Kinase/pyrophosphorylase
TPX2                 PF06886.6     57 sp|Q5HP68|KCY_STAEQ  -            215      0.42   10.7   6.8   1   1   0.00081       0.8    9.8   6.8     3    48   146   190   145   191 0.93 Targeting protein for Xklp2 (TPX2)
Guanylate_kin        PF00625.16   183 sp|Q5HPY1|KGUA_STAEQ -            207   2.3e-55  186.8   0.2   1   1   2.2e-58   2.8e-55  186.6   0.2     4   183     8   187     5   187 0.98 Guanylate kinase
AAA_18               PF13238.1    129 sp|Q5HPY1|KGUA_STAEQ -            207   4.8e-05   23.6   0.2   1   1   8.9e-08   0.00011   22.5   0.2     1   120     9   147     9   199 0.79 AAA domain
AAA_17               PF13207.1    121 sp|Q5HPY1|KGUA_STAEQ -            207   0.00051   20.8   0.4   1   1     1e-06    0.0013   19.5   0.4     2   100     9   106     8   201 0.59 AAA domain
AAA_33               PF13671.1    143 sp|Q5HPY1|KGUA_STAEQ -            207    0.0068   16.2   0.0   1   1   3.9e-05     0.048   13.5   0.0     1   137     8   155     8   161 0.66 AAA domain
AAA_22               PF13401.1    131 sp|Q5HPY1|KGUA_STAEQ -            207    0.0071   16.4   0.1   1   2   2.5e-05     0.031   14.4   0.0     3    28     5    30     2    67 0.85 AAA domain
YtxH                 PF12732.2     74 sp|Q5HPY1|KGUA_STAEQ -            207     0.011   16.0   0.0   2   2   8.5e-05       0.1   12.9   0.0    17    73   122   185   119   186 0.93 YtxH-like protein
NTPase_1             PF03266.10   168 sp|Q5HPY1|KGUA_STAEQ -            207     0.023   14.4   0.0   1   1   3.5e-05     0.044   13.5   0.0     2    64     9    70     8   100 0.75 NTPase
NB-ARC               PF00931.17   287 sp|Q5HPY1|KGUA_STAEQ -            207     0.029   13.2   0.1   1   1   4.2e-05     0.052   12.4   0.1    20    52     7    39     1    53 0.83 NB-ARC domain
cwf21                PF08312.7     46 sp|Q5HPY1|KGUA_STAEQ -            207     0.079   12.8   1.2   1   2   6.4e-05     0.079   12.8   1.2    15    40   131   157   129   161 0.91 cwf21 domain
DUF258               PF03193.11   161 sp|Q5HPY1|KGUA_STAEQ -            207       0.1   11.7   0.0   1   1   0.00019      0.23   10.6   0.0    37    58     8    29     2    53 0.79 Protein of unknown function, DUF258
ABC_tran             PF00005.22   137 sp|Q5HPY1|KGUA_STAEQ -            207      0.11   12.8   0.0   1   1   0.00021      0.26   11.6   0.0     9    97     4   163     1   193 0.58 ABC transporter
AAA                  PF00004.24   132 sp|Q5HPY1|KGUA_STAEQ -            207      0.16   12.1   0.9   1   1   0.00048       0.6   10.3   0.9     1    38     9    55     9   206 0.79 ATPase family associated with various cellular activities (AAA)
GHMP_kinases_N       PF00288.21    67 sp|Q5HPL2|KHSE_STAEQ -            306   1.5e-15   56.9   0.1   2   2   6.2e-19   4.6e-15   55.4   0.0     2    67    83   143    82   143 0.97 GHMP kinases N terminal domain
GHMP_kinases_C       PF08544.8     85 sp|Q5HPL2|KHSE_STAEQ -            306   7.3e-09   35.7   0.0   1   1   2.1e-12   1.6e-08   34.6   0.0     4    82   208   281   205   284 0.89 GHMP kinases C terminal
TK                   PF00265.13   176 sp|Q5HMA3|KITH_STAEQ -            199   9.7e-60  201.1   0.0   1   1   3.7e-63   1.1e-59  200.9   0.0     1   176     8   187     8   187 0.98 Thymidine kinase
AAA_14               PF13173.1    128 sp|Q5HMA3|KITH_STAEQ -            199    0.0035   17.2   0.0   1   1     2e-06     0.006   16.4   0.0     6    96    12   115     8   125 0.62 AAA domain
DUF134               PF02001.11   106 sp|Q5HMA3|KITH_STAEQ -            199     0.013   15.3   0.0   1   1   7.5e-06     0.022   14.6   0.0    11    62    27    78    17   117 0.77 Protein of unknown function  DUF134
zf-C4_ClpX           PF06689.8     41 sp|Q5HMA3|KITH_STAEQ -            199     0.059   12.9   0.1   1   1   5.3e-05      0.16   11.5   0.1     3    21   144   162   142   166 0.90 ClpX C4-type zinc finger
Glyco_tran_WecB      PF03808.8    172 sp|Q5HMA3|KITH_STAEQ -            199      0.11   11.9   0.1   1   1   8.9e-05      0.27   10.6   0.1    61   111    68   118    62   122 0.94 Glycosyl transferase WecB/TagA/CpsF family
Pribosyltran_N       PF13793.1    116 sp|Q5HRQ5|KPRS_STAEQ -            321     4e-51  171.6   0.4   1   2   2.7e-53     1e-49  167.1   0.0     1   116    11   127    11   127 0.99 N-terminal domain of ribose phosphate pyrophosphokinase
Pribosyl_synth       PF14572.1    184 sp|Q5HRQ5|KPRS_STAEQ -            321   1.5e-28   99.7   1.3   2   2   5.6e-31   2.1e-27   96.0   0.6    74   183   212   320   202   321 0.94 Phosphoribosyl synthetase-associated domain
Pribosyltran         PF00156.22   125 sp|Q5HRQ5|KPRS_STAEQ -            321   2.2e-16   59.6   0.7   3   3   6.7e-19   2.5e-15   56.3   0.3    30   124   171   257   155   258 0.89 Phosphoribosyl transferase domain
UPRTase              PF14681.1    207 sp|Q5HRQ5|KPRS_STAEQ -            321    0.0024   17.0   0.1   1   1     1e-06    0.0037   16.4   0.1   109   182   209   282   168   291 0.75 Uracil phosphoribosyltransferase
PK                   PF00224.16   348 sp|Q5HNK7|KPYK_STAEQ -            585  1.8e-153  510.2   8.4   1   1    1e-156    3e-153  509.5   8.4     1   345     1   341     1   344 0.98 Pyruvate kinase, barrel domain
PK_C                 PF02887.11   117 sp|Q5HNK7|KPYK_STAEQ -            585   1.2e-36  124.7   4.2   2   2   4.1e-40   1.2e-36  124.7   4.2     2   116   357   470   356   471 0.95 Pyruvate kinase, alpha/beta domain
PEP-utilizers        PF00391.18    81 sp|Q5HNK7|KPYK_STAEQ -            585   3.2e-16   58.6   0.4   1   1   1.1e-19   3.2e-16   58.6   0.4     4    81   499   575   496   575 0.93 PEP-utilising enzyme, mobile domain
HpcH_HpaI            PF03328.9    221 sp|Q5HNK7|KPYK_STAEQ -            585   0.00082   18.3   3.0   1   3   6.8e-07     0.002   17.0   0.7    76   149   176   241   161   308 0.81 HpcH/HpaI aldolase/citrate lyase family
IF2_N                PF04760.10    54 sp|Q5HNK7|KPYK_STAEQ -            585    0.0022   17.5   2.9   2   2   1.1e-05     0.032   13.8   0.0    17    40   259   281   257   284 0.92 Translation initiation factor IF-2, N-terminal region
Thymidylate_kin      PF02223.12   186 sp|Q5HRS3|KTHY_STAEQ -            203   1.9e-49  167.5   0.2   1   1     2e-52   2.1e-49  167.4   0.2     1   185     7   193     7   194 0.97 Thymidylate kinase
AAA_28               PF13521.1    163 sp|Q5HRS3|KTHY_STAEQ -            203   2.8e-09   37.1   0.0   1   1   3.3e-12   3.5e-09   36.8   0.0     2   156     5   182     4   189 0.67 AAA domain
AAA_18               PF13238.1    129 sp|Q5HRS3|KTHY_STAEQ -            203   8.8e-07   29.2   0.8   1   1   1.6e-09   1.7e-06   28.3   0.8     1   125     5   160     5   164 0.67 AAA domain
AAA_17               PF13207.1    121 sp|Q5HRS3|KTHY_STAEQ -            203   1.8e-05   25.5   0.5   1   1   2.8e-08   2.9e-05   24.8   0.5     2   114     5   149     4   198 0.68 AAA domain
AAA_33               PF13671.1    143 sp|Q5HRS3|KTHY_STAEQ -            203   2.1e-05   24.3   0.0   1   1   3.3e-08   3.5e-05   23.7   0.0     2   134     5   160     4   172 0.74 AAA domain
AAA                  PF00004.24   132 sp|Q5HRS3|KTHY_STAEQ -            203     0.012   15.8   0.1   1   2   0.00013      0.14   12.3   0.0     2    23     6    27     5    91 0.79 ATPase family associated with various cellular activities (AAA)
AAA_22               PF13401.1    131 sp|Q5HRS3|KTHY_STAEQ -            203     0.013   15.6   0.1   1   1   1.8e-05     0.019   15.0   0.1     5    40     3    32     2   194 0.85 AAA domain
dNK                  PF01712.14   146 sp|Q5HRS3|KTHY_STAEQ -            203     0.029   14.2   0.2   1   1   4.5e-05     0.048   13.5   0.2    60   114   114   172    86   200 0.70 Deoxynucleoside kinase
Zeta_toxin           PF06414.7    201 sp|Q5HRS3|KTHY_STAEQ -            203     0.034   13.2   0.1   1   2   0.00015      0.16   11.0   0.0    23    42     9    29     3    36 0.83 Zeta toxin
NTPase_1             PF03266.10   168 sp|Q5HRS3|KTHY_STAEQ -            203     0.037   13.7   0.0   1   1   6.1e-05     0.064   12.9   0.0     5    28     8    30     3    89 0.79 NTPase
AAA_16               PF13191.1    185 sp|Q5HRS3|KTHY_STAEQ -            203     0.038   13.9   0.0   1   1   6.9e-05     0.074   13.0   0.0    28    55     6    33     2    86 0.87 AAA ATPase domain
PPK2                 PF03976.9    229 sp|Q5HRS3|KTHY_STAEQ -            203     0.057   12.6   0.0   1   1     9e-05     0.095   11.9   0.0    34    68     5    38     2    79 0.86 Polyphosphate kinase 2 (PPK2)
ADK                  PF00406.17   151 sp|Q5HRS3|KTHY_STAEQ -            203     0.073   12.9   0.2   1   1   0.00016      0.17   11.7   0.2    80   148   101   169     7   172 0.84 Adenylate kinase
LacAB_rpiB           PF02502.13   140 sp|Q5HM35|LACA_STAEQ -            142   2.9e-39  133.9   0.7   1   1   2.2e-43   3.3e-39  133.7   0.7     2   140     3   139     2   139 0.98 Ribose/Galactose Isomerase
LacAB_rpiB           PF02502.13   140 sp|Q5HM36|LACB_STAEQ -            171   1.8e-44  150.8   0.4   1   1   4.7e-48   2.3e-44  150.4   0.4     1   140     2   142     2   142 0.99 Ribose/Galactose Isomerase
Ligase_CoA           PF00549.14   153 sp|Q5HM36|LACB_STAEQ -            171    0.0098   15.4   0.2   1   1   4.1e-06      0.02   14.4   0.1    24    95    12    81     3   106 0.79 CoA-ligase
OPA3                 PF07047.7    134 sp|Q5HM36|LACB_STAEQ -            171      0.07   12.9   0.0   1   1   1.7e-05     0.082   12.6   0.0    66   119    99   149    35   156 0.80 Optic atrophy 3 protein (OPA3)
PfkB                 PF00294.19   301 sp|Q5HM37|LACC_STAEQ -            310   4.4e-53  180.3   0.1   1   1   1.4e-56     5e-53  180.1   0.1     4   295     8   291     5   297 0.93 pfkB family carbohydrate kinase
Phos_pyr_kin         PF08543.7    246 sp|Q5HM37|LACC_STAEQ -            310   3.2e-07   29.7   0.0   1   1   1.4e-10   5.1e-07   29.1   0.0   104   227   161   280   123   296 0.78 Phosphomethylpyrimidine kinase
Carb_kinase          PF01256.12   242 sp|Q5HM37|LACC_STAEQ -            310   5.4e-05   22.5   0.1   1   1   2.1e-08   7.7e-05   22.0   0.1    61   206   121   272    85   297 0.75 Carbohydrate kinase
DegQ                 PF08181.6     46 sp|Q5HM37|LACC_STAEQ -            310     0.018   14.7   2.7   3   3     6e-05      0.22   11.2   0.0     3    26   183   207   182   212 0.89 DegQ (SacQ) family
DeoC                 PF01791.4    236 sp|Q5HM38|LACD_STAEQ -            325   6.9e-66  221.9   0.0   1   1   1.1e-69   8.1e-66  221.6   0.0     2   235    22   282    21   283 0.99 DeoC/LacD family aldolase
DUF2090              PF09863.4    311 sp|Q5HM38|LACD_STAEQ -            325   1.7e-06   27.0   0.1   1   2   1.3e-09   9.3e-06   24.6   0.0    31   188    15   169     3   184 0.75 Uncharacterized protein conserved in bacteria (DUF2090)
Glyco_hydro_1        PF00232.13   455 sp|Q5HM41|LACG_STAEQ -            470  3.8e-167  556.1  11.1   1   1  2.9e-171  4.2e-167  555.9  11.1     2   454     2   468     1   469 0.97 Glycosyl hydrolase family 1
2-Hacid_dh_C         PF02826.14   178 sp|Q5HLA0|LDHD_STAEQ -            330   2.2e-47  160.5   0.0   1   1   2.4e-50   3.6e-47  159.8   0.0     2   178   112   298   111   298 0.91 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain
2-Hacid_dh           PF00389.25   133 sp|Q5HLA0|LDHD_STAEQ -            330   3.8e-25   87.8   0.1   1   1     3e-28   4.5e-25   87.6   0.1    10   133    16   330     4   330 0.96 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain
NAD_binding_2        PF03446.10   163 sp|Q5HLA0|LDHD_STAEQ -            330   8.5e-06   25.6   0.1   1   1   1.2e-08   1.7e-05   24.7   0.1     2   106   147   246   146   255 0.89 NAD binding domain of 6-phosphogluconate dehydrogenase
IlvN                 PF07991.7    165 sp|Q5HLA0|LDHD_STAEQ -            330   0.00025   20.4   0.4   2   2   7.2e-07    0.0011   18.4   0.2     2    94   144   233   143   247 0.80 Acetohydroxy acid isomeroreductase, catalytic domain
UDPG_MGDP_dh_N       PF03721.9    185 sp|Q5HLA0|LDHD_STAEQ -            330   0.00071   18.9   4.1   1   2   1.5e-05     0.023   14.0   1.5     1    32   147   178   147   184 0.93 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain
AlaDh_PNT_C          PF01262.16   168 sp|Q5HLA0|LDHD_STAEQ -            330   0.00096   18.7   1.1   1   2   0.00011      0.17   11.4   0.4    12    53   138   179   128   183 0.86 Alanine dehydrogenase/PNT, C-terminal domain
F420_oxidored        PF03807.12    96 sp|Q5HLA0|LDHD_STAEQ -            330     0.027   14.9   0.7   1   1   7.5e-05      0.11   12.9   0.4     1    73   148   210   148   236 0.78 NADP oxidoreductase coenzyme F420-dependent
HEM4                 PF02602.10   231 sp|Q5HLA0|LDHD_STAEQ -            330     0.043   13.0   0.0   1   1   4.7e-05      0.07   12.3   0.0    88   186   197   311   190   322 0.82 Uroporphyrinogen-III synthase HemD
3HCDH_N              PF02737.13   180 sp|Q5HLA0|LDHD_STAEQ -            330     0.055   13.1   0.2   1   1   9.3e-05      0.14   11.8   0.0     1    33   148   180   148   234 0.86 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain
Ldh_1_N              PF00056.18   141 sp|Q5HL31|LDH_STAEQ  -            316   1.6e-47  160.8   0.3   1   1   1.2e-50   2.6e-47  160.2   0.3     2   141     7   145     6   145 0.99 lactate/malate dehydrogenase, NAD binding domain
Ldh_1_C              PF02866.13   174 sp|Q5HL31|LDH_STAEQ  -            316   6.4e-45  152.9   0.5   2   2   1.1e-46   2.2e-43  147.9   0.1     1   172   148   314   148   316 0.97 lactate/malate dehydrogenase, alpha/beta C-terminal domain
UDPG_MGDP_dh_N       PF03721.9    185 sp|Q5HL31|LDH_STAEQ  -            316   0.00081   18.8   1.3   1   1     6e-06     0.013   14.9   1.3     2   110     7   106     6   110 0.79 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain
NAD_binding_7        PF13241.1    103 sp|Q5HL31|LDH_STAEQ  -            316    0.0088   16.2   0.4   1   1   1.3e-05     0.027   14.7   0.1     7    70     5    83     2   114 0.67 Putative NAD(P)-binding
ThiF                 PF00899.16   136 sp|Q5HL31|LDH_STAEQ  -            316     0.091   12.5   0.4   1   1   9.9e-05      0.21   11.4   0.3     3    51     6    59     4    68 0.83 ThiF family
Shikimate_DH         PF01488.15   135 sp|Q5HL31|LDH_STAEQ  -            316       0.1   12.6   0.0   1   1   0.00011      0.22   11.6   0.0    12   114     5   127     1   140 0.72 Shikimate / quinate 5-dehydrogenase
OTCace               PF00185.19   158 sp|Q5HL31|LDH_STAEQ  -            316      0.12   12.2   0.1   1   1     9e-05      0.19   11.5   0.1     2    83     5    83     4   111 0.78 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain
GTP_EFTU             PF00009.22   188 sp|Q5HNW2|LEPA_STAEQ -            607   5.2e-52  176.0   0.3   1   1   4.9e-55   8.1e-52  175.3   0.3     1   187    11   190    11   191 0.94 Elongation factor Tu GTP binding domain
LepA_C               PF06421.7    108 sp|Q5HNW2|LEPA_STAEQ -            607   6.3e-51  170.8   1.2   1   1   3.8e-54   6.3e-51  170.8   1.2     1   108   497   604   497   604 0.99 GTP-binding protein LepA C-terminus
EFG_C                PF00679.19    89 sp|Q5HNW2|LEPA_STAEQ -            607   5.4e-23   80.6   0.0   1   1   8.4e-26   1.4e-22   79.3   0.0     1    88   407   495   407   496 0.95 Elongation factor G C-terminus
GTP_EFTU_D2          PF03144.20    74 sp|Q5HNW2|LEPA_STAEQ -            607   3.2e-10   39.9   3.6   1   1   5.3e-13   8.8e-10   38.5   3.2     1    74   214   284   214   284 0.94 Elongation factor Tu domain 2
EFG_II               PF14492.1     75 sp|Q5HNW2|LEPA_STAEQ -            607   3.9e-07   29.8   0.0   1   1   5.5e-10   9.1e-07   28.6   0.0     3    72   301   373   300   376 0.90 Elongation Factor G, domain II
MMR_HSR1             PF01926.18   116 sp|Q5HNW2|LEPA_STAEQ -            607   1.1e-05   25.4   0.0   1   1   1.6e-08   2.7e-05   24.1   0.0     8   116    22   141    15   141 0.64 50S ribosome-binding GTPase
Ras                  PF00071.17   162 sp|Q5HNW2|LEPA_STAEQ -            607   0.00068   19.0   0.0   1   2   3.8e-06    0.0063   15.9   0.0    30   160    61   189    52   191 0.76 Ras family
SRPRB                PF09439.5    181 sp|Q5HNW2|LEPA_STAEQ -            607     0.003   16.7   0.1   1   1   5.9e-06    0.0097   15.1   0.1    37   141    66   160    12   189 0.72 Signal recognition particle receptor beta subunit
Miro                 PF08477.8    119 sp|Q5HNW2|LEPA_STAEQ -            607     0.021   15.3   0.0   1   1     3e-05     0.049   14.1   0.0     9   101    23   131    15   143 0.71 Miro-like protein
HMGL-like            PF00682.14   237 sp|Q5HMF9|LEU1_STAEQ -            511   4.5e-82  275.2   0.2   1   1     1e-85   7.7e-82  274.4   0.2     1   236    13   251    13   252 0.99 HMGL-like
LeuA_dimer           PF08502.5    133 sp|Q5HMF9|LEU1_STAEQ -            511     2e-35  121.4   3.1   1   1   5.7e-39   4.2e-35  120.4   3.1     2   132   370   499   369   500 0.97 LeuA allosteric (dimerisation) domain
Iso_dh               PF00180.15   348 sp|Q5HMF8|LEU3_STAEQ -            347  6.6e-124  413.3   0.0   1   1  5.1e-128  7.5e-124  413.1   0.0     1   344     4   338     4   342 0.98 Isocitrate/isopropylmalate dehydrogenase
Aconitase            PF00330.15   465 sp|Q5HMF7|LEUC_STAEQ -            456  3.9e-166  553.1   0.0   1   1  5.9e-170  4.4e-166  552.9   0.0     1   465     4   446     4   446 0.99 Aconitase family (aconitate hydratase)
DUF521               PF04412.8    400 sp|Q5HMF7|LEUC_STAEQ -            456     0.026   13.0   0.0   1   2   9.7e-06     0.072   11.6   0.0   284   362   322   402   288   417 0.80 Protein of unknown function (DUF521)
Aconitase_C          PF00694.14   131 sp|Q5HMF6|LEUD_STAEQ -            189     3e-35  121.2   0.0   1   1   8.7e-39   4.3e-35  120.6   0.0     5   130     7   125     3   126 0.95 Aconitase C-terminal domain
IlvN                 PF07991.7    165 sp|Q5HMF6|LEUD_STAEQ -            189      0.17   11.2   0.0   1   1   4.7e-05      0.23   10.7   0.0    11    77    80   150    75   173 0.75 Acetohydroxy acid isomeroreductase, catalytic domain
LexA_DNA_bind        PF01726.11    65 sp|Q5HPK2|LEXA_STAEQ -            206   1.1e-28   98.5   0.1   1   1   2.4e-31   2.1e-28   97.6   0.1     1    65     1    65     1    65 0.99 LexA DNA binding domain
Peptidase_S24        PF00717.18    70 sp|Q5HPK2|LEXA_STAEQ -            206   8.8e-17   60.5   0.3   1   1     1e-19   8.8e-17   60.5   0.3     2    69   125   192   124   193 0.96 Peptidase S24-like
HTH_24               PF13412.1     48 sp|Q5HPK2|LEXA_STAEQ -            206   1.4e-06   27.5   0.0   1   1   3.2e-09   2.8e-06   26.6   0.0    15    48    22    57     4    57 0.86 Winged helix-turn-helix DNA-binding
HTH_IclR             PF09339.5     52 sp|Q5HPK2|LEXA_STAEQ -            206   1.3e-05   24.6   0.0   1   1   2.6e-08   2.3e-05   23.9   0.0    19    52    26    60    18    60 0.87 IclR helix-turn-helix domain
TrmB                 PF01978.14    68 sp|Q5HPK2|LEXA_STAEQ -            206   0.00027   20.5   0.1   1   1   1.5e-06    0.0013   18.3   0.1    23    65    26    69     3    71 0.83 Sugar-specific transcriptional regulator TrmB
MarR_2               PF12802.2     62 sp|Q5HPK2|LEXA_STAEQ -            206    0.0004   19.9   0.0   1   1   7.6e-07   0.00066   19.2   0.0    18    55    25    60    15    65 0.88 MarR family
MarR                 PF01047.17    59 sp|Q5HPK2|LEXA_STAEQ -            206    0.0019   17.8   0.0   1   1   3.9e-06    0.0034   17.0   0.0    17    51    25    60    17    62 0.86 MarR family
HTH_11               PF08279.7     55 sp|Q5HPK2|LEXA_STAEQ -            206    0.0055   16.3   0.0   1   1   1.7e-05     0.014   14.9   0.0     7    44    16    55    11    72 0.80 HTH domain
HTH_20               PF12840.2     61 sp|Q5HPK2|LEXA_STAEQ -            206     0.016   14.9   0.0   1   1   4.4e-05     0.038   13.7   0.0    24    58    25    60     6    63 0.82 Helix-turn-helix domain
Fe_dep_repress       PF01325.14    60 sp|Q5HPK2|LEXA_STAEQ -            206     0.022   14.6   0.1   1   1    0.0001     0.089   12.7   0.0     7    56    12    60     8    63 0.80 Iron dependent repressor, N-terminal DNA binding domain
HTH_36               PF13730.1     55 sp|Q5HPK2|LEXA_STAEQ -            206     0.026   14.6   0.0   1   1   4.7e-05     0.041   14.0   0.0    11    55    12    56     3    56 0.82 Helix-turn-helix domain
Penicillinase_R      PF03965.11   115 sp|Q5HPK2|LEXA_STAEQ -            206      0.03   14.3   0.0   1   1   6.7e-05     0.058   13.4   0.0    11    56    18    61     4    79 0.73 Penicillinase repressor
DUF3534              PF12053.3    145 sp|Q5HPK2|LEXA_STAEQ -            206     0.044   13.6   0.0   1   1   7.3e-05     0.064   13.1   0.0    53    87   130   167   102   184 0.84 Domain of unknown function (DUF3534)
HTH_28               PF13518.1     52 sp|Q5HPK2|LEXA_STAEQ -            206     0.063   13.3   0.0   1   1   0.00015      0.13   12.3   0.0    12    41    23    55    11    64 0.79 Helix-turn-helix domain
HTH_5                PF01022.15    47 sp|Q5HPK2|LEXA_STAEQ -            206     0.073   12.7   0.0   1   1   0.00025      0.22   11.2   0.0    18    46    28    57    25    58 0.81 Bacterial regulatory protein, arsR family
HTH_40               PF14493.1     91 sp|Q5HPK2|LEXA_STAEQ -            206     0.088   13.0   1.0   1   2    0.0011      0.92    9.7   0.0    15    44    27    56    22   107 0.75 Helix-turn-helix domain
KfrA_N               PF11740.3    120 sp|Q5HPK2|LEXA_STAEQ -            206      0.14   12.5   0.0   1   1   0.00025      0.22   11.9   0.0    16    52    22    58     8    77 0.78 Plasmid replication region DNA-binding N-term
LGT                  PF01790.13   256 sp|Q5HQW7|LGT_STAEQ  -            279   3.4e-78  262.1  19.4   1   1   5.2e-82   3.9e-78  261.9  19.4     1   255     8   256     8   257 0.94 Prolipoprotein diacylglyceryl transferase
FmdE                 PF02663.9    131 sp|Q5HQW7|LGT_STAEQ  -            279      0.24   11.3   1.0   1   2     5e-05      0.37   10.6   0.0     8    36    29    56    27    60 0.82 FmdE, Molybdenum formylmethanofuran dehydrogenase operon
Radical_SAM          PF04055.16   166 sp|Q5HQN7|LIPA_STAEQ -            304   3.8e-13   49.9   0.2   2   2   6.8e-17     1e-12   48.5   0.1     4   166    65   225    62   225 0.90 Radical SAM superfamily
BPL_LplA_LipB        PF03099.14   125 sp|Q5HRF6|LIPL_STAEQ -            279   1.5e-08   34.6   0.0   1   1   1.9e-12   2.8e-08   33.8   0.0    18   122    77   179    71   182 0.82 Biotin/lipoate A/B protein ligase family
BPL_LplA_LipB        PF03099.14   125 sp|Q5HP16|LIPM_STAEQ -            276     5e-24   84.6   0.0   1   1   1.5e-27   7.3e-24   84.1   0.0     1   125    50   188    50   188 0.96 Biotin/lipoate A/B protein ligase family
TPR_MLP1_2           PF07926.7    132 sp|Q5HP16|LIPM_STAEQ -            276     0.038   13.7   0.3   1   1   1.5e-05     0.073   12.8   0.3     7    82   195   271   191   274 0.92 TPR/MLP1/MLP2-like protein
DUF2181              PF10223.4    244 sp|Q5HP16|LIPM_STAEQ -            276     0.043   13.1   0.1   2   2   2.6e-05      0.13   11.5   0.1    56   104   224   273   212   275 0.86 Uncharacterized conserved protein (DUF2181)
YSIRK_signal         PF04650.12    27 sp|Q5HKP6|LIP_STAEQ  -            688   1.1e-11   44.0   0.9   1   1   6.8e-15     2e-11   43.1   0.9     3    27     4    28     2    28 0.95 YSIRK type signal peptide
Abhydrolase_5        PF12695.2    145 sp|Q5HKP6|LIP_STAEQ  -            688   0.00065   19.4   0.6   1   1   6.9e-07    0.0021   17.8   0.6     2    81   313   444   312   528 0.61 Alpha/beta hydrolase family
Abhydrolase_6        PF12697.2    228 sp|Q5HKP6|LIP_STAEQ  -            688      0.06   13.2   0.0   1   1   3.4e-05       0.1   12.4   0.0    65    84   408   428   313   555 0.74 Alpha/beta hydrolase family
PGAP1                PF07819.8    225 sp|Q5HKP6|LIP_STAEQ  -            688       2.8    7.4  10.7   2   2   6.2e-05      0.18   11.3   2.0    79   126   404   474   307   502 0.74 PGAP1-like protein
LrgA                 PF03788.9     96 sp|Q5HLG1|LRGA_STAEQ -            152   5.5e-25   86.9  12.1   1   1   2.8e-28   8.2e-25   86.3  12.1     2    95    36   129    35   130 0.98 LrgA family
S1FA                 PF04689.8     70 sp|Q5HLG1|LRGA_STAEQ -            152     0.016   15.0   0.4   2   2   2.5e-05     0.074   12.9   0.1    13    49   107   143   102   147 0.92 DNA binding protein S1FA
TRAP-gamma           PF07074.7    170 sp|Q5HLG1|LRGA_STAEQ -            152     0.069   12.6   0.2   1   2   2.3e-05     0.069   12.6   0.2   107   150     7    48     4    71 0.82 Translocon-associated protein, gamma subunit (TRAP-gamma)
YfhO                 PF09586.5    843 sp|Q5HLG1|LRGA_STAEQ -            152      0.39    8.6   4.9   1   1   0.00015      0.45    8.4   4.9   345   442    30   126    26   149 0.78 Bacterial membrane protein YfhO
LrgB                 PF04172.11   215 sp|Q5HLG0|LRGB_STAEQ -            233   3.5e-76  255.1  17.0   1   1   2.7e-80     4e-76  254.9  17.0     1   214    17   231    17   232 0.99 LrgB-like family
Peptidase_A8         PF01252.13   152 sp|Q5HPZ5|LSPA_STAEQ -            161   4.9e-41  139.8  14.4   1   1   1.2e-44   5.8e-41  139.6  14.4     2   146    13   152    11   160 0.94 Signal peptidase (SPase) II
DUF3753              PF12575.3     72 sp|Q5HPZ5|LSPA_STAEQ -            161      0.02   14.6   1.5   2   3     4e-06      0.02   14.6   1.5    47    70    61    84    42    86 0.84 Protein of unknown function (DUF3753)
TMCO5                PF14992.1    280 sp|Q5HPZ5|LSPA_STAEQ -            161      0.35    9.9   1.3   1   1   0.00011      0.55    9.3   1.3   219   255    63    99    42   109 0.88 TMCO5 family
MFS_1                PF07690.11   352 sp|Q5HQE8|LTAA_STAEQ -            397   3.6e-33  114.7  59.2   1   2   4.4e-34   1.3e-30  106.3  49.0     2   352    19   353    18   353 0.90 Major Facilitator Superfamily
MFS_1                PF07690.11   352 sp|Q5HQE8|LTAA_STAEQ -            397   3.6e-33  114.7  59.2   2   2     2e-08   5.8e-05   21.9   2.5   124   176   339   392   337   397 0.83 Major Facilitator Superfamily
ATG22                PF11700.3    477 sp|Q5HQE8|LTAA_STAEQ -            397   1.2e-06   27.3  29.3   2   2   3.9e-10   1.2e-06   27.3  29.3   198   466   141   388   134   396 0.73 Vacuole effluxer Atg22 like
MFS_2                PF13347.1    428 sp|Q5HQE8|LTAA_STAEQ -            397    0.0051   15.2  53.3   1   2   7.6e-06     0.022   13.1  20.9   224   339    12   127     6   131 0.81 MFS/sugar transport protein
MFS_2                PF13347.1    428 sp|Q5HQE8|LTAA_STAEQ -            397    0.0051   15.2  53.3   2   2   0.00021      0.61    8.4  23.7   146   380   141   362   126   389 0.69 MFS/sugar transport protein
DUF4131              PF13567.1    176 sp|Q5HQE8|LTAA_STAEQ -            397     0.018   14.4   2.0   1   1     6e-06     0.018   14.4   2.0    16    81   143   207   137   212 0.76 Domain of unknown function (DUF4131)
DUF3366              PF11846.3    193 sp|Q5HQE8|LTAA_STAEQ -            397       5.3    6.8  12.6   1   1   1.9e-05     0.055   13.3   3.5    22    81   139   190   137   247 0.69 Domain of unknown function (DUF3366)
Sulfatase            PF00884.18   308 sp|Q5HR16|LTAS_STAEQ -            646   1.2e-31  110.0   5.5   1   1   5.8e-35   1.7e-31  109.5   5.5     1   308   247   539   247   539 0.88 Sulfatase
DUF229               PF02995.12   497 sp|Q5HR16|LTAS_STAEQ -            646   0.00051   18.5   2.4   2   2   2.5e-07   0.00073   18.0   0.0   304   342   438   476   434   527 0.89 Protein of unknown function (DUF229)
Phosphodiest         PF01663.17   365 sp|Q5HR16|LTAS_STAEQ -            646    0.0024   17.2   0.0   1   1   1.5e-06    0.0044   16.3   0.0   209   262   442   493   395   638 0.89 Type I phosphodiesterase / nucleotide pyrophosphatase
DUF1501              PF07394.7    392 sp|Q5HR16|LTAS_STAEQ -            646    0.0071   15.2   0.0   1   2   8.5e-06     0.025   13.4   0.0   269   300   444   475   436   476 0.92 Protein of unknown function (DUF1501)
Methyltrn_RNA_2      PF04013.7    199 sp|Q5HR16|LTAS_STAEQ -            646      0.14   11.7   0.0   1   1   8.1e-05      0.24   10.9   0.0   135   174   456   495   445   500 0.85 Putative SAM-dependent RNA methyltransferase
LuxS                 PF02664.10   157 sp|Q5HM88|LUXS_STAEQ -            156   3.4e-59  198.8   0.2   1   1   2.7e-63     4e-59  198.6   0.2     1   147     4   145     4   152 0.97 S-Ribosylhomocysteinase (LuxS)
Abi                  PF02517.11    92 sp|Q5HLR3|LYRA_STAEQ -            382   7.6e-06   25.9   8.8   1   1     2e-09   7.6e-06   25.9   8.8     5    89   120   213   116   216 0.89 CAAX protease self-immunity
TMEM51               PF15345.1    233 sp|Q5HLR3|LYRA_STAEQ -            382     0.027   14.1   1.5   1   1   1.1e-05     0.041   13.5   1.5    66   185   240   359   225   374 0.62 Transmembrane protein 51
DUF1510              PF07423.6    217 sp|Q5HLR3|LYRA_STAEQ -            382     0.081   12.2  14.4   1   1   3.5e-05      0.13   11.6  14.4    16   126   241   353   231   379 0.45 Protein of unknown function (DUF1510)
Shisa                PF13908.1    179 sp|Q5HLR3|LYRA_STAEQ -            382       0.2   11.8   0.0   1   1   5.4e-05       0.2   11.8   0.0    74   161   234   327   221   353 0.55 Wnt and FGF inhibitory regulator
Amidase_3            PF01520.13   175 sp|Q5HNS0|LYTH_STAEQ -            291   2.1e-46  157.9   0.4   1   1   1.7e-49   2.7e-46  157.5   0.4     1   174   122   286   122   287 0.97 N-acetylmuramoyl-L-alanine amidase
SH3_3                PF08239.6     55 sp|Q5HNS0|LYTH_STAEQ -            291   5.2e-10   39.3   0.2   1   1   6.9e-13   1.1e-09   38.2   0.2     4    52    53   100    50   104 0.92 Bacterial SH3 domain
SH3_4                PF06347.8     55 sp|Q5HNS0|LYTH_STAEQ -            291   1.1e-05   24.9   0.5   1   1   1.4e-08   2.3e-05   23.8   0.5     3    49    50    98    49   102 0.92 Bacterial SH3 domain
ABC2_membrane_3      PF12698.2    344 sp|Q5HNS0|LYTH_STAEQ -            291    0.0018   17.3   3.1   1   1   2.2e-06    0.0037   16.3   3.1     3   131    18   237    16   275 0.70 ABC-2 family transporter protein
Arm_2                PF04826.8    254 sp|Q5HNS0|LYTH_STAEQ -            291     0.028   13.5   0.3   1   1   3.5e-05     0.058   12.4   0.1    61   137   175   250   165   258 0.84 Armadillo-like
ODV-E18              PF10717.4     85 sp|Q5HNS0|LYTH_STAEQ -            291     0.044   13.2   0.1   1   1   6.8e-05      0.11   11.9   0.1    26    52    18    44     9    62 0.66 Occlusion-derived virus envelope protein ODV-E18
DUF1312              PF07009.6    113 sp|Q5HNS0|LYTH_STAEQ -            291     0.051   13.3   1.0   1   2   0.00013      0.22   11.3   0.1     2    75    20    89    18    98 0.75 Protein of unknown function (DUF1312)
SH3_5                PF08460.5     65 sp|Q5HNS0|LYTH_STAEQ -            291     0.071   13.0   0.0   1   1   0.00028      0.47   10.4   0.0     6    38    43    75    39    76 0.91 Bacterial SH3 domain
Peptidase_M24        PF00557.19   207 sp|Q5HN46|MAP1_STAEQ -            251   6.3e-47  159.8   1.1   1   1   4.7e-51     7e-47  159.6   1.1     3   207    12   240    10   240 0.88 Metallopeptidase family M24
PemK                 PF02452.12   110 sp|Q5HME7|MAZF_STAEQ -            120   6.2e-32  110.0   0.4   1   1   4.7e-36     7e-32  109.9   0.4     1   109     3   109     3   110 0.93 PemK-like protein
ATP-gua_Ptrans       PF00217.14   243 sp|Q5HRM9|MCSB_STAEQ -            335   2.2e-74  249.8   0.8   1   1   6.8e-78   3.4e-74  249.2   0.8     3   242    18   243    16   244 0.96 ATP:guanido phosphotransferase, C-terminal catalytic domain
UPF0150              PF03681.10    48 sp|Q5HRM9|MCSB_STAEQ -            335       0.1   12.2   0.0   2   2   0.00012      0.58    9.8   0.0    15    47   207   239   199   240 0.81 Uncharacterised protein family (UPF0150)
Ldh_1_N              PF00056.18   141 sp|Q5HR46|MDH_STAEQ  -            313   2.7e-37  127.7   0.1   1   1   2.7e-40     4e-37  127.1   0.1     2   141     6   146     5   146 0.97 lactate/malate dehydrogenase, NAD binding domain
Ldh_1_C              PF02866.13   174 sp|Q5HR46|MDH_STAEQ  -            313   4.7e-34  117.6   0.0   1   1   4.9e-37   7.3e-34  116.9   0.0     3   165   151   305   149   312 0.95 lactate/malate dehydrogenase, alpha/beta C-terminal domain
UDPG_MGDP_dh_N       PF03721.9    185 sp|Q5HR46|MDH_STAEQ  -            313    0.0016   17.8   1.2   1   2   1.1e-06    0.0016   17.8   1.2     2   124     6   128     5   137 0.78 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain
Shikimate_DH         PF01488.15   135 sp|Q5HR46|MDH_STAEQ  -            313    0.0018   18.3   0.5   1   1   7.1e-06     0.011   15.8   0.4    12    51     4    43     1   132 0.64 Shikimate / quinate 5-dehydrogenase
NAD_binding_8        PF13450.1     68 sp|Q5HR46|MDH_STAEQ  -            313    0.0053   16.7   0.1   1   1   7.6e-06     0.011   15.6   0.1     1    38     9    50     9    71 0.77 NAD(P)-binding Rossmann-like domain
DAO                  PF01266.19   358 sp|Q5HR46|MDH_STAEQ  -            313     0.008   15.1   0.5   1   1   8.1e-06     0.012   14.5   0.4     2    45     7    51     6   118 0.83 FAD dependent oxidoreductase
NAD_Gly3P_dh_N       PF01210.18   157 sp|Q5HR46|MDH_STAEQ  -            313     0.028   14.1   0.4   1   1   6.1e-05      0.09   12.5   0.4     1    32     6    38     6   132 0.79 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus
DUF1652              PF07865.6     69 sp|Q5HR46|MDH_STAEQ  -            313      0.05   13.1   0.1   2   2    0.0006      0.89    9.1   0.0    42    65   191   214   188   216 0.89 Protein of unknown function (DUF1652)
Thi4                 PF01946.12   230 sp|Q5HR46|MDH_STAEQ  -            313     0.051   12.6   0.3   1   2   0.00023      0.34    9.9   0.1    20    53     7    41     2    47 0.87 Thi4 family
F420_oxidored        PF03807.12    96 sp|Q5HR46|MDH_STAEQ  -            313     0.092   13.1   0.9   1   1   0.00024      0.36   11.2   0.8     1    68     6    81     6   133 0.81 NADP oxidoreductase coenzyme F420-dependent
MecA                 PF05389.7    220 sp|Q5HQH1|MECA_STAEQ -            240   2.3e-67  226.7  17.1   1   1   9.2e-71   2.7e-67  226.5  17.1     1   220     1   233     1   233 0.89 Negative regulator of genetic competence (MecA)
Nucleocapsid-N       PF11030.3    167 sp|Q5HQH1|MECA_STAEQ -            240      0.06   13.1   0.2   1   1   3.2e-05     0.095   12.5   0.2    42   116   114   187   108   208 0.84 Nucleocapsid protein N
Peptidase_S49_N      PF08496.5    155 sp|Q5HQH1|MECA_STAEQ -            240     0.073   12.8   1.5   1   1   4.7e-05      0.14   11.9   1.5    31   103    75   146    53   157 0.70 Peptidase family S49 N-terminal
DnaG_DnaB_bind       PF08278.6    127 sp|Q5HQH1|MECA_STAEQ -            240     0.087   13.0   2.1   1   1     5e-05      0.15   12.2   2.1    74   125    81   135    36   137 0.83 DNA primase DnaG DnaB-binding
Peptidase_M56        PF05569.6    299 sp|Q5HK32|MECR1_STAEQ -            585  1.8e-100  335.8  14.0   1   1  7.1e-104  1.8e-100  335.8  14.0     2   299     5   301     4   301 0.99 BlaR1 peptidase M56
Transpeptidase       PF00905.17   304 sp|Q5HK32|MECR1_STAEQ -            585   3.4e-42  144.5   5.1   1   1   2.2e-45   5.4e-42  143.8   5.1     1   304   363   580   363   580 0.95 Penicillin binding protein transpeptidase domain
Peptidase_M48        PF01435.13   226 sp|Q5HK32|MECR1_STAEQ -            585   1.9e-06   27.6   0.0   1   1   1.6e-09   3.9e-06   26.6   0.0    22   121   128   230   114   265 0.81 Peptidase family M48
Copper-bind          PF00127.15    99 sp|Q5HK32|MECR1_STAEQ -            585     0.055   13.7   6.2   3   3   0.00013      0.33   11.1   0.9    10    66   473   528   466   547 0.81 Copper binding proteins, plastocyanin/azurin family
Trep_Strep           PF09605.5    186 sp|Q5HK32|MECR1_STAEQ -            585       0.2   11.2  13.5   2   3   7.1e-05      0.18   11.4   0.5   104   159   100   157    89   170 0.82 Hypothetical bacterial integral membrane protein (Trep_Strep)
PrgI                 PF12666.2     93 sp|Q5HK32|MECR1_STAEQ -            585      0.44   10.7   3.9   1   1   8.5e-05      0.21   11.7   0.8    25    77    10    67     6    77 0.79 PrgI family protein
ECH                  PF00378.15   245 sp|Q5HQC3|MENB_STAEQ -            272   6.2e-73  244.9   0.0   1   1   2.4e-76     7e-73  244.7   0.0     1   245    15   260    15   260 0.98 Enoyl-CoA hydratase/isomerase family
Peptidase_S49        PF01343.13   154 sp|Q5HQC3|MENB_STAEQ -            272     0.021   14.6   0.2   1   2    0.0002      0.59    9.9   0.1     7    43   107   143   103   147 0.94 Peptidase family S49
SnoaL_3              PF13474.1    121 sp|Q5HQC3|MENB_STAEQ -            272     0.045   13.8   0.3   2   2   0.00016      0.48   10.4   0.1     7    58   217   270   214   271 0.84 SnoaL-like domain
SDH_sah              PF01972.11   286 sp|Q5HQC3|MENB_STAEQ -            272     0.056   12.2   0.0   1   1   3.1e-05     0.091   11.5   0.0   121   164   108   151    97   171 0.85 Serine dehydrogenase proteinase
TPP_enzyme_N         PF02776.13   172 sp|Q5HQC5|MEND_STAEQ -            556   1.6e-24   86.3   0.0   1   1   4.6e-28   3.4e-24   85.2   0.0     7   162    14   175    11   180 0.94 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain
TPP_enzyme_C         PF02775.16   153 sp|Q5HQC5|MEND_STAEQ -            556   6.7e-06   25.7   0.0   1   1   1.7e-09   1.2e-05   24.8   0.0    33   100   418   482   397   523 0.73 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain
AMP-binding          PF00501.23   417 sp|Q5HNB2|MENE_STAEQ -            474   5.6e-73  245.7   0.0   1   1   8.9e-77   6.6e-73  245.4   0.0     1   416     5   373     5   374 0.84 AMP-binding enzyme
AMP-binding_C        PF13193.1     73 sp|Q5HNB2|MENE_STAEQ -            474   4.1e-13   50.0   0.0   1   1     1e-16   7.8e-13   49.1   0.0     2    73   383   455   382   455 0.90 AMP-binding enzyme C-terminal domain
Ubie_methyltran      PF01209.13   233 sp|Q5HP74|MENG_STAEQ -            241   8.4e-96  319.5   0.2   1   1   1.6e-98   9.9e-96  319.3   0.2     3   233     5   233     3   233 0.98 ubiE/COQ5 methyltransferase family
Methyltransf_11      PF08241.7     95 sp|Q5HP74|MENG_STAEQ -            241   1.3e-24   86.4   0.0   1   1   3.7e-27   2.3e-24   85.7   0.0     1    95    54   151    54   151 0.94 Methyltransferase domain
Methyltransf_31      PF13847.1    152 sp|Q5HP74|MENG_STAEQ -            241   3.1e-23   82.0   0.0   1   1   7.5e-26   4.6e-23   81.4   0.0     2   149    48   192    47   196 0.81 Methyltransferase domain
Methyltransf_25      PF13649.1    101 sp|Q5HP74|MENG_STAEQ -            241   3.3e-19   69.1   0.0   1   1   1.2e-21   7.1e-19   68.0   0.0     1   101    53   147    53   147 0.93 Methyltransferase domain
Methyltransf_23      PF13489.1    161 sp|Q5HP74|MENG_STAEQ -            241   3.5e-16   59.3   0.0   1   1   8.3e-19   5.1e-16   58.8   0.0     7   158    35   215    28   218 0.76 Methyltransferase domain
Methyltransf_18      PF12847.2    112 sp|Q5HP74|MENG_STAEQ -            241     1e-15   58.2   0.0   1   1   3.3e-18   2.1e-15   57.2   0.0     1   108    49   150    49   154 0.82 Methyltransferase domain
Methyltransf_12      PF08242.7     99 sp|Q5HP74|MENG_STAEQ -            241     6e-15   55.5   0.0   1   1   1.7e-17   1.1e-14   54.7   0.0     1    98    54   148    54   149 0.91 Methyltransferase domain
Methyltransf_26      PF13659.1    117 sp|Q5HP74|MENG_STAEQ -            241   6.7e-10   39.0   0.0   1   1     2e-12   1.2e-09   38.1   0.0     2   114    51   152    50   155 0.90 Methyltransferase domain
PCMT                 PF01135.14   210 sp|Q5HP74|MENG_STAEQ -            241   6.1e-09   35.7   0.0   1   1   1.4e-11   8.5e-09   35.2   0.0    64   170    40   150     4   166 0.79 Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT)
CMAS                 PF02353.15   273 sp|Q5HP74|MENG_STAEQ -            241   8.5e-06   25.0   0.3   1   1     4e-08   2.5e-05   23.5   0.1    51   163    38   150    21   160 0.79 Mycolic acid cyclopropane synthetase
RrnaAD               PF00398.15   262 sp|Q5HP74|MENG_STAEQ -            241   1.5e-05   24.1   0.0   1   1     3e-08   1.8e-05   23.8   0.0    15    93    34   115    27   180 0.88 Ribosomal RNA adenine dimethylase
FtsJ                 PF01728.14   181 sp|Q5HP74|MENG_STAEQ -            241   3.4e-05   23.9   0.1   1   2   1.4e-06   0.00087   19.3   0.0    19    74    42   109    13   124 0.81 FtsJ-like methyltransferase
MetW                 PF07021.7    193 sp|Q5HP74|MENG_STAEQ -            241   5.1e-05   22.7   0.0   1   1   1.1e-07   6.6e-05   22.3   0.0    10   103    46   144    37   198 0.79 Methionine biosynthesis protein MetW
Methyltransf_4       PF02390.12   197 sp|Q5HP74|MENG_STAEQ -            241   7.3e-05   21.9   0.2   1   2   2.9e-06    0.0018   17.3   0.1    21    81    34   110     2   125 0.70 Putative methyltransferase
Methyltransf_8       PF05148.10   219 sp|Q5HP74|MENG_STAEQ -            241    0.0001   22.0   0.0   1   1   4.2e-07   0.00026   20.6   0.0   105   159    99   154    12   173 0.72 Hypothetical methyltransferase
MTS                  PF05175.9    170 sp|Q5HP74|MENG_STAEQ -            241   0.00017   21.0   0.0   1   1   4.1e-07   0.00025   20.4   0.0    23   110    41   128     4   170 0.80 Methyltransferase small domain
Rsm22                PF09243.5    275 sp|Q5HP74|MENG_STAEQ -            241    0.0011   18.0   0.0   1   1   2.4e-06    0.0015   17.6   0.0    37   118    52   131    31   159 0.79 Mitochondrial small ribosomal subunit Rsm22
Methyltransf_3       PF01596.12   205 sp|Q5HP74|MENG_STAEQ -            241    0.0029   16.7   0.0   1   1   6.2e-06    0.0038   16.2   0.0    42   152    46   150     3   155 0.75 O-methyltransferase
Methyltransf_24      PF13578.1    106 sp|Q5HP74|MENG_STAEQ -            241     0.012   16.4   0.0   1   1   3.8e-05     0.024   15.4   0.0     9   103    62   151    55   152 0.82 Methyltransferase domain
GCD14                PF08704.5    247 sp|Q5HP74|MENG_STAEQ -            241     0.014   14.8   0.0   1   1   3.5e-05     0.021   14.3   0.0    32   143    41   151    38   165 0.79 tRNA methyltransferase complex GCD14 subunit
TehB                 PF03848.9    192 sp|Q5HP74|MENG_STAEQ -            241     0.038   13.1   0.0   1   1   9.2e-05     0.057   12.5   0.0    20   128    39   148    29   164 0.71 Tellurite resistance protein TehB
NNMT_PNMT_TEMT       PF01234.12   256 sp|Q5HP74|MENG_STAEQ -            241     0.066   12.1   0.0   1   1   0.00016     0.099   11.5   0.0   168   200   122   154    43   162 0.77 NNMT/PNMT/TEMT family
Methyltransf_32      PF13679.1    141 sp|Q5HP74|MENG_STAEQ -            241     0.073   12.7   0.2   1   1   0.00024      0.15   11.7   0.2    20    77    36    98     6   111 0.75 Methyltransferase domain
Methyltransf_29      PF03141.11   506 sp|Q5HP74|MENG_STAEQ -            241      0.08   11.2   0.3   1   1   0.00033       0.2    9.9   0.0   114   217    46   151     4   161 0.70 Putative S-adenosyl-L-methionine-dependent methyltransferase
Meth_synt_2          PF01717.13   324 sp|Q5HS05|METE_STAEQ -            748  9.5e-136  452.0   0.0   1   2   1.3e-08   6.2e-05   22.1   0.0   105   183   134   210   117   227 0.86 Cobalamin-independent synthase, Catalytic domain
Meth_synt_2          PF01717.13   324 sp|Q5HS05|METE_STAEQ -            748  9.5e-136  452.0   0.0   2   2  4.3e-132  2.1e-128  427.8   0.0     1   323   415   737   415   738 0.99 Cobalamin-independent synthase, Catalytic domain
Meth_synt_1          PF08267.7    311 sp|Q5HS05|METE_STAEQ -            748  5.2e-123  410.2   5.2   1   3  1.4e-112  7.1e-109  363.8   1.2     1   310     5   310     5   311 0.97 Cobalamin-independent synthase, N-terminal domain
Meth_synt_1          PF08267.7    311 sp|Q5HS05|METE_STAEQ -            748  5.2e-123  410.2   5.2   2   3   1.6e-06    0.0081   15.4   0.0     3    67   418   480   416   488 0.94 Cobalamin-independent synthase, N-terminal domain
Meth_synt_1          PF08267.7    311 sp|Q5HS05|METE_STAEQ -            748  5.2e-123  410.2   5.2   3   3   2.2e-11   1.1e-07   31.4   0.0   136   285   522   679   509   704 0.80 Cobalamin-independent synthase, N-terminal domain
URO-D                PF01208.12   343 sp|Q5HS05|METE_STAEQ -            748   2.1e-05   23.6   0.0   2   2   2.5e-06     0.012   14.5   0.0   180   340   566   736   536   739 0.72 Uroporphyrinogen decarboxylase (URO-D)
S-AdoMet_synt_C      PF02773.11   138 sp|Q5HNB8|METK_STAEQ -            399   1.1e-74  248.6   0.3   1   1   4.2e-78   2.1e-74  247.8   0.3     1   138   246   385   246   385 0.99 S-adenosylmethionine synthetase, C-terminal domain
S-AdoMet_synt_M      PF02772.11   120 sp|Q5HNB8|METK_STAEQ -            399   4.5e-51  171.8   0.0   1   1     2e-54   9.8e-51  170.7   0.0     2   120   126   244   125   244 0.99 S-adenosylmethionine synthetase, central domain
S-AdoMet_synt_N      PF00438.15   100 sp|Q5HNB8|METK_STAEQ -            399   6.9e-42  141.7   3.6   1   2     2e-45     1e-41  141.2   0.3     2   100     5   103     4   103 0.98 S-adenosylmethionine synthetase, N-terminal domain
ABC_tran             PF00005.22   137 sp|Q5HRU5|METN1_STAEQ -            341   1.9e-34  118.9   0.4   1   1     4e-37   3.3e-34  118.1   0.1     1   137    21   169    21   169 0.96 ABC transporter
NIL                  PF09383.5     76 sp|Q5HRU5|METN1_STAEQ -            341   5.8e-12   45.0   0.0   1   1   2.8e-14   2.3e-11   43.0   0.0     4    76   267   340   264   341 0.92 NIL domain
AAA_10               PF12846.2    304 sp|Q5HRU5|METN1_STAEQ -            341   1.7e-07   31.0   0.0   1   2    0.0012      0.99    8.7   0.0     6    32    36    62    33    74 0.78 AAA-like domain
AAA_10               PF12846.2    304 sp|Q5HRU5|METN1_STAEQ -            341   1.7e-07   31.0   0.0   2   2   6.7e-07   0.00055   19.4   0.0   219   267   157   205   145   250 0.86 AAA-like domain
SMC_N                PF02463.14   220 sp|Q5HRU5|METN1_STAEQ -            341   5.5e-05   22.5   5.4   1   2     3e-07   0.00025   20.3   2.1    78   214    83   214    14   220 0.62 RecF/RecN/SMC N terminal domain
AAA_22               PF13401.1    131 sp|Q5HRU5|METN1_STAEQ -            341   0.00022   21.3   0.2   1   1   3.5e-06    0.0029   17.7   0.2     5   123    32   198    28   207 0.64 AAA domain
AAA_16               PF13191.1    185 sp|Q5HRU5|METN1_STAEQ -            341   0.00023   21.2   0.0   1   1   6.6e-07   0.00054   19.9   0.0     7    71    16    80    10   195 0.53 AAA ATPase domain
DUF258               PF03193.11   161 sp|Q5HRU5|METN1_STAEQ -            341    0.0019   17.4   0.3   1   1   4.5e-06    0.0037   16.4   0.0    18    65    13    61     2    87 0.79 Protein of unknown function, DUF258
AAA_17               PF13207.1    121 sp|Q5HRU5|METN1_STAEQ -            341     0.003   18.3   1.1   1   1   1.8e-05     0.015   16.1   0.1     2    49    34    77    33   141 0.67 AAA domain
SbcCD_C              PF13558.1     90 sp|Q5HRU5|METN1_STAEQ -            341    0.0084   15.9   0.1   1   1   6.5e-05     0.053   13.4   0.1    61    89   156   184   134   185 0.75 Putative exonuclease SbcCD, C subunit
AAA_18               PF13238.1    129 sp|Q5HRU5|METN1_STAEQ -            341    0.0087   16.3   0.1   1   1     3e-05     0.025   14.8   0.1     3    60    36   108    35   140 0.79 AAA domain
AAA_29               PF13555.1     62 sp|Q5HRU5|METN1_STAEQ -            341    0.0095   15.4   0.0   1   1   2.6e-05     0.021   14.3   0.0    15    40    24    48    19    51 0.84 P-loop containing region of AAA domain
NB-ARC               PF00931.17   287 sp|Q5HRU5|METN1_STAEQ -            341     0.041   12.7   1.0   1   1   0.00011     0.093   11.5   1.0    11    98    20   125    12   215 0.76 NB-ARC domain
AAA_30               PF13604.1    196 sp|Q5HRU5|METN1_STAEQ -            341     0.042   13.4   0.0   1   1   0.00014      0.12   11.9   0.0    18    51    31    64    19    73 0.83 AAA domain
Miro                 PF08477.8    119 sp|Q5HRU5|METN1_STAEQ -            341     0.044   14.2   0.6   1   1   0.00016      0.13   12.7   0.1     3    69    35    92    34   135 0.64 Miro-like protein
MobB                 PF03205.9    140 sp|Q5HRU5|METN1_STAEQ -            341     0.058   13.1   0.1   1   1   0.00016      0.13   11.9   0.1     2    25    33    55    32    85 0.81 Molybdopterin guanine dinucleotide synthesis protein B
ArgK                 PF03308.11   267 sp|Q5HRU5|METN1_STAEQ -            341     0.067   11.9   0.0   1   1   0.00015      0.12   11.1   0.0    12    50    14    52     5    64 0.78 ArgK protein
MMR_HSR1             PF01926.18   116 sp|Q5HRU5|METN1_STAEQ -            341      0.13   12.2   1.6   1   1   0.00036       0.3   11.0   0.4     2    19    34    51    33   137 0.76 50S ribosome-binding GTPase
ABC_tran             PF00005.22   137 sp|Q5HQQ9|METN2_STAEQ -            341   1.9e-32  112.4   0.2   1   1     7e-35   5.5e-32  110.9   0.0     2   137    22   169    21   169 0.88 ABC transporter
NIL                  PF09383.5     76 sp|Q5HQQ9|METN2_STAEQ -            341   8.3e-21   73.3   0.1   1   1   2.4e-23   1.9e-20   72.2   0.1     3    76   264   338   262   338 0.93 NIL domain
AAA_21               PF13304.1    303 sp|Q5HQQ9|METN2_STAEQ -            341   3.8e-07   30.3   6.3   2   2   5.1e-09     4e-06   27.0   0.1   220   302   124   204    58   205 0.75 AAA domain
AAA_22               PF13401.1    131 sp|Q5HQQ9|METN2_STAEQ -            341   1.1e-05   25.5   2.5   1   1   1.5e-07   0.00012   22.2   0.8     3   124    30   199    27   207 0.62 AAA domain
SMC_N                PF02463.14   220 sp|Q5HQQ9|METN2_STAEQ -            341   0.00066   18.9   2.0   1   1   6.4e-06     0.005   16.0   1.5   114   205   118   207    18   222 0.57 RecF/RecN/SMC N terminal domain
AAA_10               PF12846.2    304 sp|Q5HQQ9|METN2_STAEQ -            341   0.00098   18.6   0.4   2   2    0.0007      0.55    9.6   0.0   215   264   153   202    62   216 0.78 AAA-like domain
AAA_16               PF13191.1    185 sp|Q5HQQ9|METN2_STAEQ -            341    0.0059   16.6   1.7   1   1   6.3e-05     0.049   13.6   1.3    22    58    29    66    16   210 0.62 AAA ATPase domain
DUF258               PF03193.11   161 sp|Q5HQQ9|METN2_STAEQ -            341     0.018   14.2   0.1   1   1   4.5e-05     0.035   13.2   0.1    25    61    20    57     3    93 0.77 Protein of unknown function, DUF258
Zeta_toxin           PF06414.7    201 sp|Q5HQQ9|METN2_STAEQ -            341     0.025   13.6   0.0   1   1   6.1e-05     0.047   12.7   0.0    23    89    38   102    32   104 0.83 Zeta toxin
Miro                 PF08477.8    119 sp|Q5HQQ9|METN2_STAEQ -            341     0.026   15.0   0.1   1   1   0.00015      0.12   12.9   0.0     3    51    35    83    34    98 0.73 Miro-like protein
SbcCD_C              PF13558.1     90 sp|Q5HQQ9|METN2_STAEQ -            341     0.038   13.9   1.1   1   1   0.00026      0.21   11.5   1.1    61    88   156   183   129   185 0.80 Putative exonuclease SbcCD, C subunit
MobB                 PF03205.9    140 sp|Q5HQQ9|METN2_STAEQ -            341      0.04   13.6   0.0   1   1   0.00012     0.097   12.3   0.0     2    20    33    51    32    57 0.88 Molybdopterin guanine dinucleotide synthesis protein B
AAA_29               PF13555.1     62 sp|Q5HQQ9|METN2_STAEQ -            341     0.048   13.1   0.0   1   1   0.00011     0.089   12.3   0.0    18    40    27    48    20    59 0.80 P-loop containing region of AAA domain
APS_kinase           PF01583.15   157 sp|Q5HQQ9|METN2_STAEQ -            341     0.055   13.1   0.0   1   1   0.00015      0.11   12.0   0.0     7    49    36    77    30    90 0.81 Adenylylsulphate kinase
AAA_33               PF13671.1    143 sp|Q5HQQ9|METN2_STAEQ -            341     0.056   13.3   0.0   1   1   0.00024      0.18   11.6   0.0     4    34    36    70    33   104 0.69 AAA domain
AAA_17               PF13207.1    121 sp|Q5HQQ9|METN2_STAEQ -            341      0.09   13.5   0.1   1   1   0.00083      0.65   10.8   0.0     2    18    34    50    33    98 0.86 AAA domain
MMR_HSR1             PF01926.18   116 sp|Q5HQQ9|METN2_STAEQ -            341      0.11   12.4   0.5   1   1   0.00042      0.33   10.9   0.5     2    20    34    52    33   199 0.77 50S ribosome-binding GTPase
CarD_CdnL_TRCF       PF02559.11    98 sp|Q5HRQ2|MFD_STAEQ  -           1169   2.6e-31  107.5   0.6   1   1   2.1e-34   2.6e-31  107.5   0.6     2    97   496   591   495   592 0.98 CarD-like/TRCF domain
TRCF                 PF03461.10   101 sp|Q5HRQ2|MFD_STAEQ  -           1169   1.5e-27   95.4   4.8   2   2   2.6e-30   3.2e-27   94.4   1.6     1   100  1021  1120  1021  1121 0.97 TRCF domain
DEAD                 PF00270.24   169 sp|Q5HRQ2|MFD_STAEQ  -           1169   2.5e-23   82.4   3.4   2   3   2.2e-23   2.7e-20   72.5   0.1     1   165   621   781   621   784 0.84 DEAD/DEAH box helicase
Helicase_C           PF00271.26    78 sp|Q5HRQ2|MFD_STAEQ  -           1169   2.4e-15   56.1   0.3   2   2   2.3e-16   2.8e-13   49.5   0.0     8    77   855   925   849   926 0.95 Helicase conserved C-terminal domain
ResIII               PF04851.10   184 sp|Q5HRQ2|MFD_STAEQ  -           1169   4.5e-09   36.4   4.6   2   2     4e-11     5e-08   33.0   0.0     2   182   618   777   617   779 0.82 Type III restriction enzyme, res subunit
UB2H                 PF14814.1     85 sp|Q5HRQ2|MFD_STAEQ  -           1169   9.9e-05   21.9   0.0   1   1   3.9e-07   0.00048   19.8   0.0     1    43   141   183   141   184 0.96 Bifunctional transglycosylase second domain
DNA_pol3_a_NI        PF14480.1     76 sp|Q5HRQ2|MFD_STAEQ  -           1169    0.0023   17.5   2.5   1   1   2.9e-06    0.0035   16.9   0.6    17    71   198   253   190   257 0.86 DNA polymerase III polC-type N-terminus I
IstB_IS21            PF01695.12   178 sp|Q5HRQ2|MFD_STAEQ  -           1169     0.031   13.6   0.0   1   1   7.4e-05     0.091   12.1   0.0    51    88   644   681   611   698 0.87 IstB-like ATP binding protein
NPV_P10              PF05531.7     75 sp|Q5HRQ2|MFD_STAEQ  -           1169      0.19   12.0   3.8   1   1   0.00054      0.66   10.2   0.1    51    74   409   432   402   433 0.84 Nucleopolyhedrovirus P10 protein
Transgly             PF00912.17   178 sp|Q5HN60|MGT_STAEQ  -            269     1e-53  181.3   1.0   1   1   5.7e-57   1.4e-53  180.8   1.0    11   178    77   250    68   250 0.94 Transglycosylase
DUF912               PF06024.7    101 sp|Q5HN60|MGT_STAEQ  -            269    0.0033   17.4   0.1   1   2   1.3e-06    0.0033   17.4   0.1    49    99    28    81     2    83 0.64 Nucleopolyhedrovirus protein of unknown function (DUF912)
ABC2_membrane_3      PF12698.2    344 sp|Q5HN60|MGT_STAEQ  -            269    0.0088   15.1   7.6   1   1   5.7e-06     0.014   14.4   7.6     3   140    46   240    42   267 0.61 ABC-2 family transporter protein
DUF843               PF05814.6     83 sp|Q5HN60|MGT_STAEQ  -            269     0.063   13.0   0.4   1   2   2.5e-05     0.063   13.0   0.4    24    61    44    79    35    81 0.83 Baculovirus protein of unknown function (DUF843)
ETRAMP               PF09716.5     84 sp|Q5HN60|MGT_STAEQ  -            269      0.15   12.0   0.3   1   2     6e-05      0.15   12.0   0.3    49    82    35    67    24    69 0.85 Malarial early transcribed membrane protein (ETRAMP)
Sigma_reg_N          PF13800.1     96 sp|Q5HN60|MGT_STAEQ  -            269      0.54   10.3   6.3   1   1   3.5e-05     0.086   12.8   0.8     6    52    37    82    34    92 0.54 Sigma factor regulator N-terminal
IPPT                 PF01715.12   253 sp|Q5HPN8|MIAA_STAEQ -            332   1.1e-80  270.3   5.1   1   1   8.1e-84   1.3e-80  270.0   5.1     1   251    41   294    41   296 0.95 IPP transferase
IPT                  PF01745.11   233 sp|Q5HPN8|MIAA_STAEQ -            332     1e-08   34.6   0.0   1   2     2e-11   3.3e-08   32.9   0.0     4    98    10   104     7   150 0.81 Isopentenyl transferase
AAA_17               PF13207.1    121 sp|Q5HPN8|MIAA_STAEQ -            332   3.1e-06   28.0   0.2   1   1   4.6e-09   7.6e-06   26.7   0.2     1    35     9    55     9   219 0.63 AAA domain
Zeta_toxin           PF06414.7    201 sp|Q5HPN8|MIAA_STAEQ -            332   1.8e-05   23.9   0.1   1   2   8.7e-07    0.0014   17.7   0.0    14    49     5    37     1    85 0.87 Zeta toxin
AAA_33               PF13671.1    143 sp|Q5HPN8|MIAA_STAEQ -            332    0.0011   18.9   0.0   1   2   4.4e-06    0.0073   16.1   0.0     1    33     9    41     9   101 0.77 AAA domain
AAA_18               PF13238.1    129 sp|Q5HPN8|MIAA_STAEQ -            332     0.039   14.2   9.4   1   1   8.4e-05      0.14   12.4   4.7     1    23    10    51    10   221 0.60 AAA domain
Arch_ATPase          PF01637.13   234 sp|Q5HPN8|MIAA_STAEQ -            332      0.27   10.9   6.0   1   1   0.00049      0.81    9.3   4.2    18   122     5   101     1   261 0.63 Archaeal ATPase
Radical_SAM          PF04055.16   166 sp|Q5HPP8|MIAB_STAEQ -            514   9.1e-37  126.7   0.1   1   1   3.2e-40   1.6e-36  125.9   0.1     1   165   217   388   217   389 0.96 Radical SAM superfamily
UPF0004              PF00919.15    98 sp|Q5HPP8|MIAB_STAEQ -            514   7.6e-30  102.6   1.0   1   1   3.6e-33   1.8e-29  101.4   1.0     2    98    70   170    69   170 0.96 Uncharacterized protein family UPF0004
TRAM                 PF01938.15    61 sp|Q5HPP8|MIAB_STAEQ -            514     1e-12   47.6   0.2   1   1   4.3e-16   2.1e-12   46.6   0.2     2    60   443   503   442   504 0.94 TRAM domain
Oxidored_q1          PF00361.15   270 sp|Q5HQL0|MNHA1_STAEQ -            801   8.6e-62  208.8  29.1   2   3   1.7e-65   8.6e-62  208.8  29.1     1   270   128   413   128   413 0.96 NADH-Ubiquinone/plastoquinone (complex I), various chains
DUF4040              PF13244.1     71 sp|Q5HQL0|MNHA1_STAEQ -            801     2e-20   72.5   5.5   2   3   4.1e-24     2e-20   72.5   5.5     2    69   630   696   629   698 0.96 Domain of unknown function (DUF4040)
Oxidored_q1_N        PF00662.15    62 sp|Q5HQL0|MNHA1_STAEQ -            801   4.5e-09   35.7   0.2   1   1   9.1e-13   4.5e-09   35.7   0.2     3    62    60   117    58   117 0.89 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus
Oxidored_q1          PF00361.15   270 sp|Q5HRB2|MNHA2_STAEQ -            800   1.3e-67  227.9  31.9   2   3   3.5e-71   1.3e-67  227.9  31.9     1   269   129   414   129   415 0.95 NADH-Ubiquinone/plastoquinone (complex I), various chains
DUF4040              PF13244.1     71 sp|Q5HRB2|MNHA2_STAEQ -            800   1.1e-18   67.0   5.1   2   3   2.8e-22   1.1e-18   67.0   5.1     2    68   635   700   634   703 0.95 Domain of unknown function (DUF4040)
Oxidored_q1_N        PF00662.15    62 sp|Q5HRB2|MNHA2_STAEQ -            800     3e-09   36.2   0.4   1   4   8.2e-13     3e-09   36.2   0.4    11    62    66   118    59   118 0.90 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus
MnhB                 PF04039.8    124 sp|Q5HQL1|MNHB1_STAEQ -            142   1.5e-30  105.7  16.3   1   1   2.3e-34   1.7e-30  105.5  16.3     2   124     8   135     7   135 0.95 Domain related to MnhB subunit of Na+/H+ antiporter
MnhB                 PF04039.8    124 sp|Q5HRB1|MNHB2_STAEQ -            141     2e-31  108.6  16.0   1   1   4.7e-35   2.3e-31  108.4  16.0     1   123     5   132     5   133 0.97 Domain related to MnhB subunit of Na+/H+ antiporter
LAB_N                PF07578.6     72 sp|Q5HRB1|MNHB2_STAEQ -            141    0.0051   16.6   0.5   1   1   3.1e-06     0.016   15.1   0.2     2    44    37    80    37    85 0.89 Lipid A Biosynthesis N-terminal domain
HILPDA               PF15220.1     63 sp|Q5HRB1|MNHB2_STAEQ -            141      0.26   11.2   2.4   1   1   0.00012       0.6   10.1   2.4     5    29   114   138   110   139 0.90 Hypoxia-inducible lipid droplet-associated
Oxidored_q2          PF00420.19    95 sp|Q5HQL2|MNHC1_STAEQ -            115   1.9e-24   85.0   6.3   1   1   3.1e-28   2.3e-24   84.7   6.3     2    90     5   106     4   108 0.97 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L
Oxidored_q2          PF00420.19    95 sp|Q5HRB0|MNHC2_STAEQ -            114     5e-22   77.2   6.5   1   1   1.2e-25     6e-22   77.0   6.5     2    90     5   107     4   109 0.98 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L
Syndecan             PF01034.15    64 sp|Q5HRB0|MNHC2_STAEQ -            114      0.11   12.2   0.1   2   2   2.1e-05      0.11   12.2   0.1    10    43    69   105    62   111 0.70 Syndecan domain
Oxidored_q1          PF00361.15   270 sp|Q5HQL3|MNHD1_STAEQ -            498   1.9e-51  174.9  35.5   3   4   1.3e-55   1.9e-51  174.9  35.5     3   267   130   400   128   403 0.97 NADH-Ubiquinone/plastoquinone (complex I), various chains
Oxidored_q1          PF00361.15   270 sp|Q5HRA9|MNHD2_STAEQ -            499   5.5e-48  163.5  32.6   2   3   7.4e-52   5.5e-48  163.5  32.6     2   269   127   397   126   398 0.97 NADH-Ubiquinone/plastoquinone (complex I), various chains
Oxidored_q1_N        PF00662.15    62 sp|Q5HRA9|MNHD2_STAEQ -            499    0.0074   15.8   0.1   2   5   9.9e-07    0.0074   15.8   0.1    16    44    69    97    63   124 0.89 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus
MNHE                 PF01899.11   156 sp|Q5HQL4|MNHE1_STAEQ -            159   6.6e-44  149.2   2.0   1   1   2.1e-47     8e-44  149.0   2.0     2   155     8   156     7   157 0.95 Na+/H+ ion antiporter subunit
FUSC_2               PF13515.1    128 sp|Q5HQL4|MNHE1_STAEQ -            159     0.031   14.1   5.7   1   1   8.9e-06     0.033   14.1   5.1    38    82    26    73    17   122 0.83 Fusaric acid resistance protein-like
DUF659               PF04937.10   153 sp|Q5HQL4|MNHE1_STAEQ -            159     0.037   13.5   0.1   1   1   1.5e-05     0.055   12.9   0.1    53    92   120   159   114   159 0.90 Protein of unknown function (DUF 659)
MNHE                 PF01899.11   156 sp|Q5HRA8|MNHE2_STAEQ -            160   3.1e-32  111.3   2.8   1   1   2.4e-36   3.6e-32  111.1   2.8     1   155     6   158     6   159 0.91 Na+/H+ ion antiporter subunit
MrpF_PhaF            PF04066.8     55 sp|Q5HQL5|MNHF1_STAEQ -             97   5.1e-18   65.0   9.5   2   2   3.4e-22   5.1e-18   65.0   9.5     1    54    31    84    31    85 0.98 Multiple resistance and pH regulation protein F (MrpF / PhaF)
MrpF_PhaF            PF04066.8     55 sp|Q5HRA7|MNHF2_STAEQ -            100   2.3e-15   56.5   5.3   2   2   4.7e-19   2.3e-15   56.5   5.3     1    54    34    87    34    88 0.97 Multiple resistance and pH regulation protein F (MrpF / PhaF)
Fumarate_red_C       PF02300.12   129 sp|Q5HRA7|MNHF2_STAEQ -            100      0.13   12.0   3.4   1   1   3.2e-05      0.16   11.8   3.4    34    89    13    67     1    86 0.82 Fumarate reductase subunit C
PhaG_MnhG_YufB       PF03334.9     81 sp|Q5HQL6|MNHG1_STAEQ -            118   6.9e-24   83.7  11.1   1   1     3e-27     9e-24   83.3  11.1     1    81    13    95     2    95 0.97 Na+/H+ antiporter subunit
YtpI                 PF14007.1     89 sp|Q5HQL6|MNHG1_STAEQ -            118     0.031   14.2   9.8   2   2   1.4e-05     0.041   13.8   8.3     2    69    11    80    10    96 0.88 YtpI-like protein
7TM-7TMR_HD          PF07698.6    194 sp|Q5HQL6|MNHG1_STAEQ -            118      0.51    9.7  10.5   1   1   0.00021      0.64    9.4  10.5    95   179     2    89     1    94 0.77 7TM receptor with intracellular HD hydrolase
PhaG_MnhG_YufB       PF03334.9     81 sp|Q5HRA6|MNHG2_STAEQ -            154   8.2e-22   77.0   7.6   1   1   2.2e-25   1.1e-21   76.6   7.6     1    81    15    97    15    97 0.98 Na+/H+ antiporter subunit
PNTB                 PF02233.11   464 sp|Q5HRA6|MNHG2_STAEQ -            154      0.51    9.0   5.7   1   1   0.00012       0.6    8.8   5.7   126   206     7    91     1    99 0.74 NAD(P) transhydrogenase beta subunit
tRNA_Me_trans        PF03054.11   356 sp|Q5HNS9|MNMA_STAEQ -            372  4.2e-149  495.9   0.2   1   1  1.9e-152  4.8e-149  495.7   0.2     2   356     7   358     6   358 0.99 tRNA methyl transferase
NAD_synthase         PF02540.12   242 sp|Q5HNS9|MNMA_STAEQ -            372   2.4e-07   29.8   0.0   1   2   6.3e-10   1.6e-06   27.2   0.0    20    85     7    78     2   131 0.74 NAD synthase
ATP_bind_3           PF01171.15   182 sp|Q5HNS9|MNMA_STAEQ -            372   8.1e-05   22.1   0.0   1   1   8.4e-08   0.00021   20.8   0.0     2   164     8   190     7   206 0.68 PP-loop family
ThiI                 PF02568.9    197 sp|Q5HNS9|MNMA_STAEQ -            372   0.00018   20.9   0.0   1   1   1.2e-07   0.00031   20.2   0.0     4    44     6    46     3    90 0.78 Thiamine biosynthesis protein (ThiI)
Asn_synthase         PF00733.16   255 sp|Q5HNS9|MNMA_STAEQ -            372    0.0002   20.9   0.0   1   1   1.1e-07   0.00028   20.4   0.0    17    91     5    86     2   187 0.81 Asparagine synthase
QueC                 PF06508.8    210 sp|Q5HNS9|MNMA_STAEQ -            372   0.00046   19.5   0.1   1   2   7.2e-06     0.018   14.3   0.0     2    30     8    36     7    59 0.90 Queuosine biosynthesis protein QueC
TrmE_N               PF10396.4    114 sp|Q5HS36|MNME_STAEQ -            459   3.9e-39  133.1   0.0   1   1   9.5e-42   8.3e-39  132.0   0.0     1   114     5   124     5   124 0.94 GTP-binding protein TrmE N-terminus
MMR_HSR1             PF01926.18   116 sp|Q5HS36|MNME_STAEQ -            459   3.5e-24   84.9   1.0   1   1   8.4e-27   7.3e-24   83.9   1.0     3   116   225   336   223   336 0.91 50S ribosome-binding GTPase
GTPase_Cys_C         PF12631.2     73 sp|Q5HS36|MNME_STAEQ -            459   1.6e-20   73.2   0.5   1   1   1.4e-22   1.2e-19   70.4   0.1     2    73   385   456   384   456 0.98 Catalytic cysteine-containing C-terminus of GTPase, MnmE
FeoB_N               PF02421.13   156 sp|Q5HS36|MNME_STAEQ -            459   9.5e-11   41.2   3.1   1   1   1.8e-13   1.6e-10   40.4   3.1     3   154   224   373   222   375 0.87 Ferrous iron transport protein B
AIG1                 PF04548.11   212 sp|Q5HS36|MNME_STAEQ -            459   5.2e-08   32.2   0.7   1   1   1.5e-10   1.3e-07   30.9   0.7     3   108   224   326   222   348 0.87 AIG1 family
Dynamin_N            PF00350.18   168 sp|Q5HS36|MNME_STAEQ -            459   3.5e-07   30.1   3.0   2   3   3.6e-05     0.031   14.0   0.0     2    35   225   259   224   262 0.79 Dynamin family
Dynamin_N            PF00350.18   168 sp|Q5HS36|MNME_STAEQ -            459   3.5e-07   30.1   3.0   3   3   3.6e-05     0.031   14.0   0.1   102   165   270   335   262   338 0.75 Dynamin family
Miro                 PF08477.8    119 sp|Q5HS36|MNME_STAEQ -            459   1.2e-06   29.0   0.1   1   1   4.9e-09   4.3e-06   27.2   0.1     3   119   225   338   224   338 0.79 Miro-like protein
Ras                  PF00071.17   162 sp|Q5HS36|MNME_STAEQ -            459   5.9e-06   25.7   0.1   1   1   1.4e-08   1.2e-05   24.7   0.1     3   151   225   370   223   378 0.69 Ras family
DUF258               PF03193.11   161 sp|Q5HS36|MNME_STAEQ -            459   0.00071   18.7   0.0   1   1     2e-06    0.0018   17.5   0.0    36    98   222   280   192   298 0.78 Protein of unknown function, DUF258
GTP_EFTU             PF00009.22   188 sp|Q5HS36|MNME_STAEQ -            459    0.0013   18.2   0.8   1   1   0.00016      0.14   11.5   0.9    88   173   295   366   220   417 0.71 Elongation factor Tu GTP binding domain
Cyc-maltodext_C      PF10438.4     78 sp|Q5HS36|MNME_STAEQ -            459    0.0017   18.3   0.7   1   1   1.4e-05     0.012   15.6   0.2    19    48   326   355   263   370 0.89 Cyclo-malto-dextrinase C-terminal domain
SRPRB                PF09439.5    181 sp|Q5HS36|MNME_STAEQ -            459     0.013   14.7   0.5   1   1   6.2e-05     0.054   12.7   0.0     6    60   224   280   220   312 0.75 Signal recognition particle receptor beta subunit
Arf                  PF00025.16   175 sp|Q5HS36|MNME_STAEQ -            459     0.021   14.0   2.4   1   1   0.00011     0.093   11.9   0.8    15   144   222   356   208   377 0.72 ADP-ribosylation factor family
AAA_25               PF13481.1    194 sp|Q5HS36|MNME_STAEQ -            459      0.04   13.3   0.5   1   2   0.00058       0.5    9.7   0.0    29    53   217   241   187   244 0.79 AAA domain
AAA_22               PF13401.1    131 sp|Q5HS36|MNME_STAEQ -            459      0.08   13.0   0.0   1   1   0.00024      0.21   11.7   0.0     3    44   220   265   218   349 0.69 AAA domain
GIDA                 PF01134.17   392 sp|Q5HS35|MNMG_STAEQ -            625  1.9e-168  560.3   0.4   1   1    2e-171  2.9e-168  559.7   0.0     1   390     6   394     6   396 0.99 Glucose inhibited division protein A
GIDA_assoc_3         PF13932.1     72 sp|Q5HS35|MNMG_STAEQ -            625   1.6e-30  104.9   0.3   2   2   1.1e-33   1.6e-30  104.9   0.3     2    72   543   613   542   613 0.99 GidA associated domain 3
Pyr_redox_2          PF07992.9    201 sp|Q5HS35|MNMG_STAEQ -            625   2.5e-06   27.5   3.5   1   2     2e-09     3e-06   27.2   0.8     1   119     6   154     6   159 0.57 Pyridine nucleotide-disulphide oxidoreductase
FAD_binding_2        PF00890.19   417 sp|Q5HS35|MNMG_STAEQ -            625   1.2e-05   24.3   7.6   1   3   1.4e-06     0.002   17.0   1.8     1    28     6    33     6    36 0.95 FAD binding domain
DAO                  PF01266.19   358 sp|Q5HS35|MNMG_STAEQ -            625   4.4e-05   22.5   4.8   2   3     4e-06     0.006   15.5   0.0   143   203    96   157    62   182 0.82 FAD dependent oxidoreductase
FAD_oxidored         PF12831.2    428 sp|Q5HS35|MNMG_STAEQ -            625   0.00081   18.5   1.4   1   2   5.4e-07   0.00081   18.5   1.4     1    28     6    33     6    36 0.96 FAD dependent oxidoreductase
Thi4                 PF01946.12   230 sp|Q5HS35|MNMG_STAEQ -            625    0.0079   15.3   0.4   1   2   5.6e-05     0.083   11.9   0.1    16    47     3    34     1    60 0.91 Thi4 family
Pyr_redox_3          PF13738.1    203 sp|Q5HS35|MNMG_STAEQ -            625     0.055   13.5   1.2   1   1   0.00021      0.31   11.0   1.2     1   137     8   156     8   180 0.77 Pyridine nucleotide-disulphide oxidoreductase
FAD_binding_3        PF01494.14   356 sp|Q5HS35|MNMG_STAEQ -            625      0.28   10.2   2.5   1   1    0.0006      0.89    8.5   2.5     1   136     4   146     4   149 0.66 FAD binding domain
HI0933_like          PF03486.9    409 sp|Q5HS35|MNMG_STAEQ -            625      0.49    8.8   6.1   1   3   0.00015      0.22    9.9   0.5     1    29     5    33     5    37 0.93 HI0933-like protein
Nramp                PF01566.13   358 sp|Q5HQ64|MNTH_STAEQ -            453  1.7e-119  398.7  26.8   1   1  1.6e-123  2.4e-119  398.3  26.8     1   357    58   424    58   425 0.97 Natural resistance-associated macrophage protein
Mob_synth_C          PF06463.8    128 sp|Q5HLY1|MOAA_STAEQ -            340   7.7e-37  125.8   0.0   1   1   3.6e-40   1.3e-36  125.0   0.0     1   127   189   317   189   318 0.97 Molybdenum Cofactor Synthesis C
Radical_SAM          PF04055.16   166 sp|Q5HLY1|MOAA_STAEQ -            340   2.1e-23   83.3   0.4   1   1     1e-26   3.7e-23   82.5   0.1     1   165    18   183    18   184 0.97 Radical SAM superfamily
Fer4_12              PF13353.1    139 sp|Q5HLY1|MOAA_STAEQ -            340   2.5e-09   37.3   1.4   1   2   4.2e-12   1.6e-08   34.7   0.1    13   120    22   132    11   166 0.82 4Fe-4S single cluster domain
Fer4_14              PF13394.1    119 sp|Q5HLY1|MOAA_STAEQ -            340     4e-08   33.3   0.1   1   2   5.9e-11   2.2e-07   30.9   0.0     5    97    21   113    19   130 0.73 4Fe-4S single cluster domain
MoCF_biosynth        PF00994.19   144 sp|Q5HLX4|MOAB_STAEQ -            176     1e-31  109.2   0.1   1   1     8e-36   1.2e-31  109.0   0.1     1   144    18   165    18   165 0.91 Probable molybdopterin binding domain
MoaC                 PF01967.16   136 sp|Q5HLX5|MOAC_STAEQ -            162   8.7e-53  177.6   1.2   1   1   1.4e-56     1e-52  177.4   1.2     1   136    15   153    15   153 0.95 MoaC family
Ribosomal_S9         PF00380.14   121 sp|Q5HLX5|MOAC_STAEQ -            162     0.046   13.9   0.1   1   1   8.7e-06     0.064   13.5   0.1    12    83    27   132    19   155 0.83 Ribosomal protein S9/S16
MoaE                 PF02391.12   117 sp|Q5HLX8|MOAE_STAEQ -            150   6.5e-40  135.5   0.5   1   1   1.6e-43   7.8e-40  135.3   0.5     2   116     4   118     3   119 0.98 MoaE protein
DUF1409              PF07197.7     51 sp|Q5HLX8|MOAE_STAEQ -            150      0.05   13.6   0.1   1   1   2.5e-05      0.12   12.4   0.1    16    45    41    70    40    71 0.95 Protein of unknown function (DUF1409)
CDC27                PF09507.5    430 sp|Q5HLX8|MOAE_STAEQ -            150     0.064   12.4   0.0   1   1   1.4e-05      0.07   12.3   0.0    83   140    74   130    43   149 0.84 DNA polymerase subunit Cdc27
NTP_transf_3         PF12804.2    160 sp|Q5HLY0|MOBA_STAEQ -            201   5.5e-24   85.0   0.0   1   1   2.2e-27   6.6e-24   84.8   0.0     1   156     3   165     3   179 0.83 MobA-like NTP transferase domain
CTP_transf_3         PF02348.14   217 sp|Q5HLY0|MOBA_STAEQ -            201   3.6e-05   23.5   0.0   1   1   1.7e-08     5e-05   23.0   0.0     2   106     3   105     2   116 0.75 Cytidylyltransferase
IspD                 PF01128.14   221 sp|Q5HLY0|MOBA_STAEQ -            201     0.061   12.8   0.0   1   1   2.8e-05     0.084   12.3   0.0     2    59     2    57     1    64 0.89 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase
T4_Gp59_N            PF08993.5     94 sp|Q5HLY0|MOBA_STAEQ -            201      0.08   12.9   1.5   1   2   0.00031      0.91    9.5   0.3    34    65    17    49    10    71 0.76 T4 gene Gp59 loader of gp41 DNA helicase
MoeA_N               PF03453.12   162 sp|Q5HLX6|MOEA_STAEQ -            419   5.2e-52  175.4   0.1   1   1   1.9e-55   9.6e-52  174.5   0.1     2   162     9   173     8   173 0.99 MoeA N-terminal region (domain I and II)
MoCF_biosynth        PF00994.19   144 sp|Q5HLX6|MOEA_STAEQ -            419   1.5e-28   99.0   0.1   1   2   2.1e-31   1.1e-27   96.2   0.0     1   143   186   323   186   324 0.93 Probable molybdopterin binding domain
MoeA_C               PF03454.10    72 sp|Q5HLX6|MOEA_STAEQ -            419   2.2e-16   59.5   0.0   2   2   5.5e-19   2.7e-15   56.0   0.0     1    71   337   407   337   408 0.96 MoeA C-terminal region (domain IV)
DUF2156              PF09924.4    299 sp|Q5HPI1|MPRF_STAEQ -            840   5.4e-92  307.7   0.0   1   1   1.4e-95     7e-92  307.4   0.0     2   299   528   820   527   820 0.99 Uncharacterized conserved protein (DUF2156)
UPF0104              PF03706.8    294 sp|Q5HPI1|MPRF_STAEQ -            840   5.1e-15   55.5  35.5   1   1     1e-18   5.1e-15   55.5  35.5     3   293    27   290    22   291 0.82 Uncharacterised protein family (UPF0104)
FixQ                 PF05545.6     49 sp|Q5HPI1|MPRF_STAEQ -            840     0.032   13.8   0.7   4   4   6.4e-06     0.032   13.8   0.7    10    34   490   514   484   520 0.88 Cbb3-type cytochrome oxidase component FixQ
Mqo                  PF06039.10   489 sp|Q5HLN0|MQO1_STAEQ -            492  1.5e-251  834.7   1.4   1   1  3.5e-255  1.7e-251  834.5   1.4     2   489     5   491     4   491 1.00 Malate:quinone oxidoreductase (Mqo)
DAO                  PF01266.19   358 sp|Q5HLN0|MQO1_STAEQ -            492   2.4e-07   30.0   0.0   1   1   5.5e-11   2.7e-07   29.8   0.0     1   236     9   284     9   411 0.80 FAD dependent oxidoreductase
NAD_binding_8        PF13450.1     68 sp|Q5HLN0|MQO1_STAEQ -            492     0.098   12.7   0.0   1   1     5e-05      0.25   11.4   0.0     2    36    13    49    12    71 0.87 NAD(P)-binding Rossmann-like domain
Mqo                  PF06039.10   489 sp|Q5HKN2|MQO2_STAEQ -            498  7.5e-237  786.2   0.0   1   1  2.3e-240  8.6e-237  786.0   0.0     2   489     4   492     3   492 1.00 Malate:quinone oxidoreductase (Mqo)
DAO                  PF01266.19   358 sp|Q5HKN2|MQO2_STAEQ -            498   1.5e-08   33.9   0.0   1   1   4.3e-12   1.6e-08   33.8   0.0     2   215     9   263     8   430 0.87 FAD dependent oxidoreductase
FAD_binding_2        PF00890.19   417 sp|Q5HKN2|MQO2_STAEQ -            498       0.1   11.4   0.0   1   1   4.6e-05      0.17   10.6   0.0   135   202   178   246   122   265 0.82 FAD binding domain
Mqo                  PF06039.10   489 sp|Q5HKD6|MQO3_STAEQ -            494  4.5e-234  777.0   0.1   1   1  5.2e-237  5.1e-234  776.9   0.1     2   489     4   492     3   492 1.00 Malate:quinone oxidoreductase (Mqo)
DAO                  PF01266.19   358 sp|Q5HKD6|MQO3_STAEQ -            494   9.4e-15   54.3   0.0   1   1   1.1e-17   1.1e-14   54.1   0.0     2   237     9   285     8   438 0.74 FAD dependent oxidoreductase
Pyr_redox            PF00070.22    80 sp|Q5HKD6|MQO3_STAEQ -            494   0.00015   22.1   1.8   1   2   0.00015      0.15   12.4   0.1     1    21     8    28     8    45 0.86 Pyridine nucleotide-disulphide oxidoreductase
K_oxygenase          PF13434.1    341 sp|Q5HKD6|MQO3_STAEQ -            494   0.00077   18.4   0.3   2   2   4.5e-05     0.045   12.6   0.1   287   338   193   244   145   247 0.86 L-lysine 6-monooxygenase (NADPH-requiring)
NAD_binding_8        PF13450.1     68 sp|Q5HKD6|MQO3_STAEQ -            494     0.001   19.0   0.0   1   1   3.7e-06    0.0036   17.2   0.0     1    41    11    53    11    71 0.85 NAD(P)-binding Rossmann-like domain
Pyr_redox_2          PF07992.9    201 sp|Q5HKD6|MQO3_STAEQ -            494    0.0011   18.9   0.1   1   2   0.00084      0.83    9.4   0.0     2    34     9    43     8    86 0.88 Pyridine nucleotide-disulphide oxidoreductase
NAD_binding_9        PF13454.1    156 sp|Q5HKD6|MQO3_STAEQ -            494    0.0029   17.3   0.2   1   2   0.00079      0.78    9.4   0.0     1    37    10    44    10    58 0.85 FAD-NAD(P)-binding
NAD_Gly3P_dh_N       PF01210.18   157 sp|Q5HKD6|MQO3_STAEQ -            494     0.018   14.7   0.1   1   1     4e-05     0.039   13.6   0.1     2    51     9    58     8    89 0.86 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus
FAD_binding_2        PF00890.19   417 sp|Q5HKD6|MQO3_STAEQ -            494     0.066   12.0   0.5   1   1   0.00012      0.11   11.2   0.0   135   204   178   248   103   275 0.82 FAD binding domain
HI0933_like          PF03486.9    409 sp|Q5HKD6|MQO3_STAEQ -            494      0.11   10.9   0.0   1   1   0.00028      0.28    9.6   0.0   120   170   196   251   185   263 0.78 HI0933-like protein
Mqo                  PF06039.10   489 sp|Q5HL19|MQO4_STAEQ -            499  1.7e-242  804.8   0.0   1   1  3.9e-246  1.9e-242  804.6   0.0     2   489     4   492     3   492 1.00 Malate:quinone oxidoreductase (Mqo)
K_oxygenase          PF13434.1    341 sp|Q5HL19|MQO4_STAEQ -            499      0.05   12.5   0.0   1   1     2e-05     0.098   11.5   0.0   285   338   191   244   180   245 0.92 L-lysine 6-monooxygenase (NADPH-requiring)
NAD_binding_8        PF13450.1     68 sp|Q5HL19|MQO4_STAEQ -            499       0.1   12.6   0.0   1   1   5.2e-05      0.25   11.3   0.0     2    41    12    53    11    74 0.83 NAD(P)-binding Rossmann-like domain
Glycos_transf_4      PF00953.16   159 sp|Q5HQ10|MRAY_STAEQ -            321   6.4e-39  133.3  23.4   2   3   8.6e-43   6.4e-39  133.3  23.4     2   158    77   246    76   247 0.92 Glycosyl transferase family 4
MraY_sig1            PF10555.4     13 sp|Q5HQ10|MRAY_STAEQ -            321    0.0035   16.5   3.4   1   1   4.7e-07    0.0035   16.5   3.4     1    13    44    56    44    56 0.91 Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1
MraZ                 PF02381.13    72 sp|Q5HQ14|MRAZ_STAEQ -            143   5.8e-56  186.1   0.6   1   2     4e-30     3e-26   90.9   0.1     1    72     1    71     1    71 0.99 MraZ protein
MraZ                 PF02381.13    72 sp|Q5HQ14|MRAZ_STAEQ -            143   5.8e-56  186.1   0.6   2   2   4.1e-31     3e-27   94.1   0.0     1    71    72   141    72   142 0.97 MraZ protein
MscL                 PF01741.13   128 sp|Q5HPJ2|MSCL_STAEQ -            116   4.9e-45  152.7   8.1   1   1   1.1e-48   5.5e-45  152.6   8.1     1   127     1   116     1   116 0.95 Large-conductance mechanosensitive channel, MscL
EI24                 PF07264.6    219 sp|Q5HPJ2|MSCL_STAEQ -            116    0.0039   16.6   0.7   1   1   8.8e-07    0.0043   16.5   0.7    17   131     4   114     2   116 0.75 Etoposide-induced protein 2.4 (EI24)
UPF0239              PF06783.6     85 sp|Q5HPJ2|MSCL_STAEQ -            116      0.15   12.0   0.8   1   1   8.8e-05      0.43   10.5   0.8    22    50    61    89    53   111 0.71 Uncharacterised protein family (UPF0239)
SelR                 PF01641.13   124 sp|Q5HPB4|MSRB_STAEQ -            142   7.9e-53  177.3   0.0   1   1   6.2e-57   9.1e-53  177.1   0.0     3   123     4   124     2   125 0.98 SelR domain
PNP_UDP_1            PF01048.15   234 sp|Q5HNU8|MTNN_STAEQ -            228   3.9e-50  170.0   0.0   1   1   2.9e-54   4.2e-50  169.8   0.0     2   230     2   225     1   228 0.92 Phosphorylase superfamily
EPSP_synthase        PF00275.15   419 sp|Q5HMC2|MURA1_STAEQ -            421  2.7e-109  365.3   3.5   1   1  2.1e-113  3.1e-109  365.1   3.5     2   419     7   409     6   409 0.94 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase)
EPSP_synthase        PF00275.15   419 sp|Q5HM98|MURA2_STAEQ -            419   3.5e-92  309.0   1.3   1   1   8.1e-96     4e-92  308.8   1.3     2   419     9   407     8   407 0.92 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase)
DUF4231              PF14015.1    112 sp|Q5HM98|MURA2_STAEQ -            419     0.019   14.9   0.0   1   1     1e-05     0.051   13.5   0.0    50    96   370   415   353   419 0.77 Protein of unknown function (DUF4231)
ADH_zinc_N           PF00107.21   130 sp|Q5HM98|MURA2_STAEQ -            419     0.026   14.0   0.6   1   2   2.1e-05       0.1   12.1   0.1    49   112   149   210   129   221 0.79 Zinc-binding dehydrogenase
MurB_C               PF02873.11   105 sp|Q5HQZ1|MURB_STAEQ -            306   8.3e-31  105.8   0.0   1   1   3.9e-34   1.9e-30  104.6   0.0     3   105   201   301   199   301 0.98 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain
FAD_binding_4        PF01565.18   139 sp|Q5HQZ1|MURB_STAEQ -            306   2.8e-27   94.8   0.1   1   1   1.1e-30   5.5e-27   93.9   0.1     2   138    38   166    37   167 0.96 FAD binding domain
Stomoxyn             PF11585.3     42 sp|Q5HQZ1|MURB_STAEQ -            306     0.035   13.9   0.4   1   1   1.5e-05     0.073   12.8   0.4    26    39    95   108    90   111 0.87 Insect antimicrobial peptide, stomoxyn
Mur_ligase_M         PF08245.7    188 sp|Q5HNG9|MURC_STAEQ -            437   1.3e-28  100.3   0.0   1   1   7.2e-32   2.1e-28   99.6   0.0     1   187   106   274   106   275 0.90 Mur ligase middle domain
Mur_ligase_C         PF02875.16    91 sp|Q5HNG9|MURC_STAEQ -            437   2.4e-20   72.3   0.1   1   1   3.3e-23   9.9e-20   70.3   0.0     1    86   295   376   295   381 0.91 Mur ligase family, glutamate ligase domain
Mur_ligase           PF01225.20    83 sp|Q5HNG9|MURC_STAEQ -            437   6.8e-18   64.5   0.1   1   1     6e-21   1.8e-17   63.1   0.1     1    82     3   101     3   102 0.95 Mur ligase family, catalytic domain
MoaE                 PF02391.12   117 sp|Q5HNG9|MURC_STAEQ -            437      0.02   14.6   0.6   1   1   1.9e-05     0.057   13.2   0.1    21    77   284   339   265   347 0.84 MoaE protein
DUF3479              PF11965.3    164 sp|Q5HNG9|MURC_STAEQ -            437       0.1   12.3   0.0   1   1   6.2e-05      0.18   11.5   0.0    10    67   314   371   306   378 0.85 Domain of unknown function (DUF3479)
Mur_ligase_M         PF08245.7    188 sp|Q5HQ09|MURD_STAEQ -            449   4.3e-44  150.8   1.5   1   1   1.8e-47   6.9e-44  150.1   1.5     1   187   116   287   116   288 0.91 Mur ligase middle domain
Mur_ligase_C         PF02875.16    91 sp|Q5HQ09|MURD_STAEQ -            449   2.7e-09   36.9   0.0   1   1   2.4e-12   8.8e-09   35.2   0.0     2    77   309   375   308   389 0.90 Mur ligase family, glutamate ligase domain
NAD_binding_7        PF13241.1    103 sp|Q5HQ09|MURD_STAEQ -            449    0.0033   17.6   0.0   1   1   3.1e-06     0.011   15.9   0.0     3    44     5    44     3   103 0.84 Putative NAD(P)-binding
2-Hacid_dh_C         PF02826.14   178 sp|Q5HQ09|MURD_STAEQ -            449     0.018   14.2   0.0   1   1   1.1e-05     0.039   13.0   0.0    31    77     4    49     1    66 0.82 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain
Mur_ligase_M         PF08245.7    188 sp|Q5HQE6|MURE_STAEQ -            494   3.7e-46  157.5   1.0   1   1   1.3e-49   6.5e-46  156.7   1.0     1   188   108   312   108   312 0.93 Mur ligase middle domain
Mur_ligase_C         PF02875.16    91 sp|Q5HQE6|MURE_STAEQ -            494   3.5e-18   65.4   0.0   1   1   1.8e-21     9e-18   64.1   0.0     1    88   332   414   332   416 0.95 Mur ligase family, glutamate ligase domain
Mur_ligase           PF01225.20    83 sp|Q5HQE6|MURE_STAEQ -            494   1.9e-12   47.0   0.0   1   1   9.1e-16   4.5e-12   45.8   0.0     2    81    23    94    22    96 0.90 Mur ligase family, catalytic domain
Glyco_transf_28      PF03033.15   139 sp|Q5HPC0|MURG_STAEQ -            357   7.8e-27   93.7   0.0   1   1   6.5e-30   1.4e-26   92.9   0.0     2   138     5   143     4   144 0.95 Glycosyltransferase family 28 N-terminal domain
Glyco_tran_28_C      PF04101.11   167 sp|Q5HPC0|MURG_STAEQ -            357   1.1e-23   83.6   0.0   1   1   8.7e-27   1.8e-23   82.9   0.0     2   155   190   338   189   350 0.85 Glycosyltransferase family 28 C-terminal domain
Glyco_trans_1_3      PF13528.1    318 sp|Q5HPC0|MURG_STAEQ -            357   4.4e-11   42.5   0.0   1   1   1.1e-13   2.3e-10   40.1   0.0    13   311    13   317     3   324 0.72 Glycosyl transferase family 1
UDPGT                PF00201.13   500 sp|Q5HPC0|MURG_STAEQ -            357   1.7e-06   26.9   0.0   1   1   1.3e-09   2.7e-06   26.2   0.0   342   405   254   322   248   346 0.87 UDP-glucoronosyl and UDP-glucosyl transferase
Alg14                PF08660.6    170 sp|Q5HPC0|MURG_STAEQ -            357   3.2e-05   23.9   0.0   1   1   2.7e-08   5.8e-05   23.1   0.0     9   118    13   119     6   160 0.82 Oligosaccharide biosynthesis protein Alg14 like
Glyco_trans_4_2      PF13477.1    139 sp|Q5HPC0|MURG_STAEQ -            357     0.029   14.2   0.7   1   1   2.8e-05      0.06   13.1   0.5    42   125    50   143     3   152 0.62 Glycosyl transferase 4-like
Peptidase_C54        PF03416.14   279 sp|Q5HPC0|MURG_STAEQ -            357     0.061   12.4   0.0   1   1   4.1e-05     0.088   11.9   0.0   128   199   147   224   123   239 0.72 Peptidase family C54
Asp_Glu_race         PF01177.17   216 sp|Q5HQ24|MURI_STAEQ -            267   1.2e-32  113.6   0.1   1   1   1.9e-36   1.4e-32  113.3   0.1     1   215     5   215     5   216 0.87 Asp/Glu/Hydantoin racemase
Bac_export_2         PF01312.14   343 sp|Q5HQ24|MURI_STAEQ -            267     0.032   13.1   0.1   1   1   7.9e-06     0.059   12.2   0.1   239   294    49   102    46   137 0.83 FlhB HrpN YscU SpaS Family
SIS                  PF01380.17   131 sp|Q5HLT3|MURQ_STAEQ -            295   3.3e-11   42.8   4.7   2   3   3.1e-14   1.5e-10   40.7   0.1    50   128   126   206   111   209 0.91 SIS domain
SIS_2                PF13580.1    138 sp|Q5HLT3|MURQ_STAEQ -            295   8.3e-09   35.2   0.2   1   1   2.9e-12   1.4e-08   34.5   0.2    19   136    44   162    29   164 0.90 SIS domain
RCC1                 PF00415.13    51 sp|Q5HLT3|MURQ_STAEQ -            295     0.089   13.0   0.3   2   2   0.00016      0.78    9.9   0.1     2    46    61   101    60   106 0.88 Regulator of chromosome condensation (RCC1) repeat
MutL_C               PF08676.6    144 sp|Q5HPP4|MUTL_STAEQ -            645   3.1e-45  153.2   0.1   1   1   1.9e-48     7e-45  152.1   0.1     3   144   457   601   455   601 0.97 MutL C terminal dimerisation domain
DNA_mis_repair       PF01119.14   119 sp|Q5HPP4|MUTL_STAEQ -            645   1.8e-38  130.6   0.1   1   1   1.3e-41   4.9e-38  129.2   0.1     2   118   209   325   208   326 0.98 DNA mismatch repair protein, C-terminal domain
HATPase_c            PF02518.21   111 sp|Q5HPP4|MUTL_STAEQ -            645   1.6e-12   47.1   0.2   1   1     1e-15   3.8e-12   45.9   0.2     3    84    21   101    19   147 0.82 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
HATPase_c_3          PF13589.1    137 sp|Q5HPP4|MUTL_STAEQ -            645   1.6e-11   44.0   0.2   1   2   4.2e-15   1.6e-11   44.0   0.2     4    99    25   120    22   150 0.78 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
MutS_V               PF00488.16   235 sp|Q5HQ30|MUTS2_STAEQ -            782   4.5e-41  140.7   0.0   1   1   5.5e-44     1e-40  139.6   0.0     2   228   293   512   292   519 0.95 MutS domain V
Smr                  PF01713.16    83 sp|Q5HQ30|MUTS2_STAEQ -            782   1.1e-16   60.7   0.2   1   1   2.3e-19   4.2e-16   58.8   0.2     1    83   707   782   707   782 0.98 Smr domain
MutS_III             PF05192.13   204 sp|Q5HQ30|MUTS2_STAEQ -            782   0.00017   21.4   0.7   1   2   9.4e-08   0.00017   21.4   0.7    27   204    20   285    14   285 0.81 MutS domain III
IncA                 PF04156.9    191 sp|Q5HQ30|MUTS2_STAEQ -            782     0.001   18.7  13.8   3   3   5.5e-07     0.001   18.7  13.8    77   170   518   621   493   642 0.67 IncA protein
AAA_21               PF13304.1    303 sp|Q5HQ30|MUTS2_STAEQ -            782    0.0089   16.0   5.7   3   3   2.2e-05      0.04   13.8   0.0   248   301   401   454   398   455 0.87 AAA domain
Sin3_corepress       PF08295.7    101 sp|Q5HQ30|MUTS2_STAEQ -            782     0.012   15.3   2.5   1   2   1.7e-05     0.032   14.0   0.2     3    95   474   566   472   572 0.80 Sin3 family co-repressor
MutS_V               PF00488.16   235 sp|Q5HPP5|MUTS_STAEQ -            873  3.3e-100  334.3   0.9   2   2  7.8e-103  9.7e-100  332.8   0.1     1   234   553   785   553   786 0.99 MutS domain V
MutS_III             PF05192.13   204 sp|Q5HPP5|MUTS_STAEQ -            873   2.4e-51  174.4   2.2   2   2   1.9e-54   2.4e-51  174.4   2.2     3   204   253   546   252   546 0.95 MutS domain III
MutS_I               PF01624.15   113 sp|Q5HPP5|MUTS_STAEQ -            873   6.3e-50  167.9   0.1   1   2   7.4e-52   9.1e-49  164.2   0.0     1   112     5   116     5   117 0.98 MutS domain I
MutS_IV              PF05190.13    92 sp|Q5HPP5|MUTS_STAEQ -            873   5.1e-27   93.8   0.6   1   1   4.1e-30   5.1e-27   93.8   0.6     1    91   411   504   411   505 0.97 MutS family domain IV
MutS_II              PF05188.12   137 sp|Q5HPP5|MUTS_STAEQ -            873   1.4e-16   60.7   4.1   1   2     4e-19   4.9e-16   59.0   0.6     1   137   125   236   125   236 0.89 MutS domain II
AAA_14               PF13173.1    128 sp|Q5HPP5|MUTS_STAEQ -            873   0.00098   19.0   0.0   2   2     8e-07   0.00098   19.0   0.0     3   102   595   711   593   727 0.67 AAA domain
AAA_29               PF13555.1     62 sp|Q5HPP5|MUTS_STAEQ -            873    0.0043   16.5   0.0   1   2     3e-05     0.037   13.5   0.0    17    40   588   611   576   625 0.78 P-loop containing region of AAA domain
DUF1811              PF08838.5    102 sp|Q5HPP5|MUTS_STAEQ -            873     0.071   13.0   0.1   1   1   0.00034      0.42   10.5   0.1    11    66   516   569   509   577 0.91 Protein of unknown function (DUF1811)
Spuma_A9PTase        PF03539.9    163 sp|Q5HPP5|MUTS_STAEQ -            873      0.11   12.4   1.5   1   1   0.00021      0.26   11.2   1.5    16   118   191   292   178   304 0.78 Spumavirus aspartic protease (A9)
CTP_transf_2         PF01467.21   157 sp|Q5HNV3|NADD_STAEQ -            191   1.2e-30  106.6   0.2   1   1   9.4e-35   1.4e-30  106.4   0.2     1   157     7   163     7   163 0.94 Cytidylyltransferase
NAD_synthase         PF02540.12   242 sp|Q5HN23|NADE_STAEQ -            275   2.5e-67  226.3   0.1   1   1     4e-71     3e-67  226.0   0.1     2   241    24   263    23   264 0.97 NAD synthase
ATP_bind_3           PF01171.15   182 sp|Q5HN23|NADE_STAEQ -            275    0.0098   15.4   0.0   1   1   2.5e-06     0.019   14.5   0.0     2    64    44   111    43   166 0.69 PP-loop family
NAD_kinase           PF01513.16   285 sp|Q5HQG2|NADK_STAEQ -            269   1.8e-50  171.3   0.0   1   1   2.9e-54   2.2e-50  171.0   0.0    64   284    23   248     3   249 0.95 ATP-NAD kinase
DAGK_cat             PF00781.19   130 sp|Q5HQG2|NADK_STAEQ -            269     0.013   14.9   0.0   1   1   3.2e-06     0.024   14.0   0.0    39    73    21    54     7    68 0.82 Diacylglycerol kinase catalytic domain
Glucosamine_iso      PF01182.15   199 sp|Q5HRH8|NAGB_STAEQ -            243   5.7e-22   78.4   0.0   1   1   1.1e-25   8.3e-22   77.8   0.0     9   198    16   211     9   212 0.81 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase
Sugar-bind           PF04198.8    255 sp|Q5HRH8|NAGB_STAEQ -            243    0.0034   16.3   0.0   2   2   1.9e-06     0.014   14.3   0.0   146   239   128   215   105   219 0.70 Putative sugar-binding domain
Hydrolase_6          PF13344.1    101 sp|Q5HQN3|NAGD_STAEQ -            259   7.9e-27   93.1   0.0   1   1   3.2e-30   1.2e-26   92.5   0.0     1   100     7   106     7   107 0.98 Haloacid dehalogenase-like hydrolase
Hydrolase_like       PF13242.1     75 sp|Q5HQN3|NAGD_STAEQ -            259   2.8e-16   58.9   0.1   2   2   1.5e-18   5.4e-15   54.8   0.0     2    73   180   251   179   253 0.96 HAD-hyrolase-like
Hydrolase            PF00702.21   215 sp|Q5HQN3|NAGD_STAEQ -            259   2.2e-06   28.2   0.3   1   1   1.4e-09   5.1e-06   27.0   0.3     2   214     5   219     4   220 0.72 haloacid dehalogenase-like hydrolase
HAD_2                PF13419.1    176 sp|Q5HQN3|NAGD_STAEQ -            259   3.9e-05   23.9   0.0   2   2   1.9e-06    0.0069   16.6   0.0   131   176   180   226   132   226 0.81 Haloacid dehalogenase-like hydrolase
MFS_1                PF07690.11   352 sp|Q5HLK7|NART_STAEQ -            387   1.7e-46  158.5  60.1   1   2   3.1e-48   1.5e-44  152.1  43.7     4   350    16   342    14   344 0.88 Major Facilitator Superfamily
MFS_1                PF07690.11   352 sp|Q5HLK7|NART_STAEQ -            387   1.7e-46  158.5  60.1   2   2   4.1e-08    0.0002   20.1   8.4    97   172   304   376   303   385 0.89 Major Facilitator Superfamily
MFS_2                PF13347.1    428 sp|Q5HLK7|NART_STAEQ -            387     2e-05   23.2  42.5   1   4   1.6e-05     0.079   11.3   7.7   231   333    14   114     7   121 0.88 MFS/sugar transport protein
MFS_2                PF13347.1    428 sp|Q5HLK7|NART_STAEQ -            387     2e-05   23.2  42.5   2   4   7.6e-05      0.38    9.1   3.8   229   312    98   182    95   186 0.88 MFS/sugar transport protein
MFS_2                PF13347.1    428 sp|Q5HLK7|NART_STAEQ -            387     2e-05   23.2  42.5   3   4   5.4e-09   2.7e-05   22.7   4.8   206   341   184   318   181   325 0.89 MFS/sugar transport protein
MFS_3                PF05977.8    524 sp|Q5HLK7|NART_STAEQ -            387     0.079   11.0  15.8   2   2   3.9e-05      0.19    9.7   2.1    61   119   255   312   248   318 0.88 Transmembrane secretion effector
NDK                  PF00334.14   135 sp|Q5HP76|NDK_STAEQ  -            149   3.3e-59  198.5   0.0   1   1   2.5e-63   3.7e-59  198.3   0.0     1   135     2   136     2   136 0.99 Nucleoside diphosphate kinase
Nitroreductase       PF00881.19   165 sp|Q5HRX9|NFRA_STAEQ -            251   1.9e-21   76.5   0.0   1   1   2.4e-25   3.6e-21   75.6   0.0     1   164     9   164     9   165 0.91 Nitroreductase family
SIR2                 PF02146.12   178 sp|Q5HM33|NPD_STAEQ  -            246   8.8e-54  181.9   0.0   1   1   2.2e-57   1.1e-53  181.6   0.0     1   178    24   199    24   199 0.94 Sir2 family
TPP_enzyme_M         PF00205.17   137 sp|Q5HM33|NPD_STAEQ  -            246     0.037   13.7   0.0   2   2   6.5e-05      0.32   10.7   0.0    61   113   168   221   140   242 0.72 Thiamine pyrophosphate enzyme, central domain
Flavodoxin_NdrI      PF07972.6    122 sp|Q5HR00|NRDI_STAEQ -            132   9.5e-37  125.6   0.4   1   1   2.3e-40   1.1e-36  125.3   0.4     1   121     3   114     3   115 0.97 NrdI Flavodoxin like
Flavodoxin_1         PF00258.20   143 sp|Q5HR00|NRDI_STAEQ -            132     0.018   15.0   0.1   1   1   6.6e-06     0.033   14.1   0.1    47   114    38    93     3   109 0.75 Flavodoxin
DUF2835              PF11197.3     68 sp|Q5HR00|NRDI_STAEQ -            132       0.1   12.3   0.0   1   1   4.2e-05      0.21   11.3   0.0    40    61    12    33     9    37 0.87 Protein of unknown function (DUF2835)
ATP-cone             PF03477.11    90 sp|Q5HNL8|NRDR_STAEQ -            156   1.1e-19   70.5   0.2   1   1   1.6e-22   1.6e-19   70.1   0.2     2    89    50   136    49   137 0.97 ATP cone domain
zf-DBF               PF07535.7     49 sp|Q5HNL8|NRDR_STAEQ -            156     3e-07   29.9   0.3   1   2   0.00032      0.31   10.7   0.1     8    22    31    44    28    54 0.91 DBF zinc finger
zf-DBF               PF07535.7     49 sp|Q5HNL8|NRDR_STAEQ -            156     3e-07   29.9   0.3   2   2   3.1e-06     0.003   17.1   0.0     8    48    74   145    71   146 0.90 DBF zinc finger
TF_Zn_Ribbon         PF08271.7     43 sp|Q5HNL8|NRDR_STAEQ -            156    0.0023   17.2   4.4   1   2   4.4e-05     0.044   13.1   0.1     1    18     1    19     1    20 0.89 TFIIB zinc-binding
Zn-ribbon_8          PF09723.5     42 sp|Q5HNL8|NRDR_STAEQ -            156    0.0028   17.5   2.1   2   2   0.00069      0.68    9.9   0.1     7    22    30    45    30    51 0.85 Zinc ribbon domain
TFIIS_C              PF01096.13    39 sp|Q5HNL8|NRDR_STAEQ -            156     0.014   15.0   3.7   1   1     5e-05     0.049   13.2   3.7     2    39     2    39     1    39 0.83 Transcription factor S-II (TFIIS)
Zn_Tnp_IS1595        PF12760.2     46 sp|Q5HNL8|NRDR_STAEQ -            156     0.014   15.2   2.8   1   1   2.6e-05     0.025   14.3   2.8    20    45     2    36     1    37 0.85 Transposase zinc-ribbon domain
FYVE                 PF01363.16    69 sp|Q5HNL8|NRDR_STAEQ -            156     0.017   14.9   0.5   1   1   3.3e-05     0.033   14.0   0.5    11    36     2    39     1    91 0.70 FYVE zinc finger
Ham1p_like           PF01725.11   189 sp|Q5HQ23|NTPA_STAEQ -            195   4.6e-70  234.8   0.5   1   1   3.5e-74   5.2e-70  234.6   0.5     1   189     4   189     4   189 0.98 Ham1 family
NusB                 PF01029.13   134 sp|Q5HP28|NUSB_STAEQ -            129   1.1e-36  125.8   0.2   1   1   8.1e-41   1.2e-36  125.6   0.2     2   133     5   128     4   129 0.94 NusB family
NusG                 PF02357.14    92 sp|Q5HRL6|NUSG_STAEQ -            182   8.4e-26   90.0   0.3   1   1   3.1e-29   1.5e-25   89.2   0.3     1    89     8   106     8   109 0.89 Transcription termination factor nusG
KOW                  PF00467.24    32 sp|Q5HRL6|NUSG_STAEQ -            182   7.5e-05   22.2   0.0   1   1     4e-08    0.0002   20.9   0.0     1    31   131   163   131   164 0.88 KOW motif
DUF3912              PF13051.1     68 sp|Q5HRL6|NUSG_STAEQ -            182      0.22   11.3   2.0   3   3   7.9e-05      0.39   10.4   0.2     5    31   131   157   126   180 0.70 Protein of unknown function (DUF3912)
Aminotran_3          PF00202.16   339 sp|Q5HQK4|OAT_STAEQ  -            396  2.5e-112  375.0   0.0   1   1    1e-115    3e-112  374.8   0.0     2   338    26   346    25   347 0.99 Aminotransferase class-III
Aminotran_1_2        PF00155.16   363 sp|Q5HQK4|OAT_STAEQ  -            396   0.00013   21.0   0.0   2   2   8.7e-08   0.00026   20.0   0.0   130   362   174   390   165   391 0.75 Aminotransferase class I and II
Beta_elim_lyase      PF01212.16   290 sp|Q5HQK4|OAT_STAEQ  -            396   0.00019   20.7   0.0   1   1   9.5e-08   0.00028   20.1   0.0    34   164    87   226    20   227 0.78 Beta-eliminating lyase
DegT_DnrJ_EryC1      PF01041.12   363 sp|Q5HQK4|OAT_STAEQ  -            396     0.001   18.1   0.0   1   1   1.1e-06    0.0034   16.4   0.0    24   150    81   230    59   236 0.74 DegT/DnrJ/EryC1/StrS aminotransferase family
GPI                  PF06560.6    182 sp|Q5HQK4|OAT_STAEQ  -            396      0.13   11.2   0.0   2   2   0.00016      0.48    9.4   0.0    44   134   114   204    85   218 0.79 Glucose-6-phosphate isomerase (GPI)
GTP1_OBG             PF01018.17   156 sp|Q5HNQ7|OBG_STAEQ  -            430   1.5e-65  219.6   1.7   1   1   2.6e-68   2.7e-65  218.7   1.7     1   156     2   157     2   157 0.99 GTP1/OBG
DUF1967              PF09269.6     69 sp|Q5HNQ7|OBG_STAEQ  -            430   7.8e-26   89.5   0.1   1   1   1.7e-28   1.8e-25   88.3   0.1     1    69   360   428   360   428 0.99 Domain of unknown function (DUF1967)
MMR_HSR1             PF01926.18   116 sp|Q5HNQ7|OBG_STAEQ  -            430   2.5e-19   69.3   0.0   1   1   4.4e-22   4.6e-19   68.4   0.0     1   116   160   283   160   283 0.82 50S ribosome-binding GTPase
FeoB_N               PF02421.13   156 sp|Q5HNQ7|OBG_STAEQ  -            430   6.7e-10   38.4   0.0   1   1   2.2e-12   2.4e-09   36.6   0.0     3   155   161   323   159   324 0.78 Ferrous iron transport protein B
Arf                  PF00025.16   175 sp|Q5HNQ7|OBG_STAEQ  -            430    0.0009   18.5   0.1   1   1     2e-06    0.0021   17.3   0.1    20   173   164   326   151   328 0.64 ADP-ribosylation factor family
GTP_EFTU             PF00009.22   188 sp|Q5HNQ7|OBG_STAEQ  -            430    0.0051   16.2   0.4   2   2   2.1e-05     0.023   14.1   0.1   122   187   274   329   256   330 0.80 Elongation factor Tu GTP binding domain
Gtr1_RagA            PF04670.7    232 sp|Q5HNQ7|OBG_STAEQ  -            430    0.0063   15.6   0.0   1   1   8.5e-06    0.0091   15.1   0.0     4   135   163   298   160   307 0.82 Gtr1/RagA G protein conserved region
Miro                 PF08477.8    119 sp|Q5HNQ7|OBG_STAEQ  -            430     0.018   15.5   0.0   1   1   3.4e-05     0.036   14.5   0.0     2   119   161   285   160   285 0.73 Miro-like protein
ATP_bind_1           PF03029.12   238 sp|Q5HNQ7|OBG_STAEQ  -            430     0.025   14.1   1.1   2   2   0.00047       0.5    9.8   0.1    92   218   207   340   188   356 0.60 Conserved hypothetical ATP binding protein
MMR_HSR1_C           PF08438.5    109 sp|Q5HNQ7|OBG_STAEQ  -            430     0.036   14.2   0.0   1   1   9.4e-05       0.1   12.8   0.0     1    32   280   312   280   410 0.95 GTPase of unknown function C-terminal
NOG1                 PF06858.9     58 sp|Q5HNQ7|OBG_STAEQ  -            430      0.06   13.2   0.0   1   1   0.00012      0.12   12.2   0.0    15    58   238   285   230   285 0.77 Nucleolar GTP-binding protein 1 (NOG1)
ABC_tran             PF00005.22   137 sp|Q5HNQ7|OBG_STAEQ  -            430      0.11   12.8   0.1   1   1   0.00039      0.42   10.9   0.0     4    34   151   181   149   214 0.86 ABC transporter
ArgK                 PF03308.11   267 sp|Q5HNQ7|OBG_STAEQ  -            430      0.14   10.8   0.2   1   1   0.00044      0.46    9.2   0.1    32    51   161   180   157   188 0.85 ArgK protein
E1_dh                PF00676.15   300 sp|Q5HPC6|ODO1_STAEQ -            934   1.9e-62  210.6   0.1   1   1   5.7e-66   2.8e-62  210.1   0.1     3   297   217   527   215   530 0.95 Dehydrogenase E1 component
Transket_pyr         PF02779.19   178 sp|Q5HPC6|ODO1_STAEQ -            934   2.1e-52  177.1   0.0   1   1   8.4e-56   4.1e-52  176.2   0.0     3   177   592   788   591   789 0.97 Transketolase, pyrimidine binding domain
Kinesin-relat_1      PF12711.2     86 sp|Q5HPC6|ODO1_STAEQ -            934     0.079   13.3   0.5   1   1   5.3e-05      0.26   11.6   0.5     9    53   490   534   485   544 0.92 Kinesin motor
2-oxoacid_dh         PF00198.18   231 sp|Q5HPC7|ODO2_STAEQ -            420   4.2e-78  261.7   0.2   1   1   3.5e-81   5.8e-78  261.3   0.2     5   231   190   418   186   418 0.97 2-oxoacid dehydrogenases acyltransferase (catalytic domain)
Biotin_lipoyl        PF00364.17    74 sp|Q5HPC7|ODO2_STAEQ -            420   8.4e-21   73.4   4.9   1   1     1e-23   1.7e-20   72.4   4.9     2    73     3    74     2    75 0.97 Biotin-requiring enzyme
E3_binding           PF02817.12    39 sp|Q5HPC7|ODO2_STAEQ -            420   2.1e-07   30.4   0.1   1   1   3.5e-10   5.8e-07   29.0   0.1     1    36   121   154   121   158 0.85 e3 binding domain
Biotin_lipoyl_2      PF13533.1     50 sp|Q5HPC7|ODO2_STAEQ -            420    0.0035   16.9   1.5   1   2   5.7e-05     0.095   12.3   0.1    10    37    15    42     9    52 0.89 Biotin-lipoyl like
Utp14                PF04615.8    735 sp|Q5HPC7|ODO2_STAEQ -            420      0.74    7.9  28.4   1   1   0.00059      0.98    7.5  28.4   392   569    46   225    23   250 0.51 Utp14 protein
2-oxoacid_dh         PF00198.18   231 sp|Q5HQ74|ODP2_STAEQ -            433     2e-88  295.5   0.2   1   1   2.2e-91     3e-88  294.9   0.2     4   231   203   431   201   431 0.98 2-oxoacid dehydrogenases acyltransferase (catalytic domain)
Biotin_lipoyl        PF00364.17    74 sp|Q5HQ74|ODP2_STAEQ -            433   3.2e-24   84.3   3.1   1   1   2.4e-27   3.2e-24   84.3   3.1     2    74     4    76     3    76 0.99 Biotin-requiring enzyme
E3_binding           PF02817.12    39 sp|Q5HQ74|ODP2_STAEQ -            433   1.7e-16   59.5   0.0   1   1   2.9e-19   3.9e-16   58.3   0.0     2    39   126   163   125   163 0.96 e3 binding domain
Biotin_lipoyl_2      PF13533.1     50 sp|Q5HQ74|ODP2_STAEQ -            433     2e-09   36.9   8.5   1   2   9.4e-05      0.13   11.9   0.1    11    37    17    43    14    44 0.91 Biotin-lipoyl like
Biotin_lipoyl_2      PF13533.1     50 sp|Q5HQ74|ODP2_STAEQ -            433     2e-09   36.9   8.5   2   2   1.9e-09   2.5e-06   27.0   2.5     2    39    45    82    44   101 0.93 Biotin-lipoyl like
GCV_H                PF01597.14   122 sp|Q5HQ74|ODP2_STAEQ -            433   0.00026   20.6   0.5   1   1   6.1e-07   0.00083   19.0   0.5    40    74    25    59    14    64 0.88 Glycine cleavage H-protein
HlyD                 PF00529.15   305 sp|Q5HQ74|ODP2_STAEQ -            433    0.0022   17.3   3.9   1   1   1.6e-06    0.0022   17.3   3.9     1    43    45    96    45   198 0.55 HlyD family secretion protein
HlyD_3               PF13437.1    105 sp|Q5HQ74|ODP2_STAEQ -            433    0.0036   17.6   3.1   2   2   0.00018      0.25   11.7   0.7     2    49    48    97    47   122 0.77 HlyD family secretion protein
RnfC_N               PF13375.1    101 sp|Q5HQ74|ODP2_STAEQ -            433    0.0049   16.5   2.0   1   1     6e-06    0.0081   15.8   0.7    37    80    15    59    13    78 0.86 RnfC Barrel sandwich hybrid domain
DUF896               PF05979.7     65 sp|Q5HQ74|ODP2_STAEQ -            433     0.016   14.7   0.1   1   1   3.3e-05     0.044   13.3   0.1     4    25   324   345   322   348 0.90 Bacterial protein of unknown function (DUF896)
HTH_17               PF12728.2     51 sp|Q5HQ74|ODP2_STAEQ -            433     0.027   14.7   0.0   1   1   5.2e-05      0.07   13.3   0.0    17    50   132   168   130   169 0.86 Helix-turn-helix domain
MYCBPAP              PF14646.1    426 sp|Q5HQ74|ODP2_STAEQ -            433      0.14   10.8   3.4   1   1   0.00016      0.22   10.2   3.4   154   230    78   155    68   181 0.82 MYCBP-associated protein family
OsmC                 PF02566.14   100 sp|Q5HQR8|OHRL1_STAEQ -            140   1.2e-19   70.3   0.0   1   1   2.2e-23   1.6e-19   69.9   0.0     2    99    37   134    36   135 0.87 OsmC-like protein
DUF3668              PF12416.3    340 sp|Q5HQR8|OHRL1_STAEQ -            140     0.088   12.0   0.0   1   1   1.6e-05      0.12   11.5   0.0   110   182    60   132    59   135 0.83 Cep120 protein
OsmC                 PF02566.14   100 sp|Q5HKS7|OHRL2_STAEQ -            142   3.5e-18   65.6   0.0   2   2   4.3e-22   6.4e-18   64.7   0.0     2    99    41   137    39   138 0.79 OsmC-like protein
P5CR_dimer           PF14748.1    107 sp|Q5HP48|P5CR_STAEQ -            271   2.1e-28   98.4   0.0   1   1   1.3e-31   3.2e-28   97.8   0.0     1   107   159   265   159   265 0.98 Pyrroline-5-carboxylate reductase dimerisation
F420_oxidored        PF03807.12    96 sp|Q5HP48|P5CR_STAEQ -            271   1.9e-15   57.0   0.0   1   1   2.8e-18     7e-15   55.2   0.0     2    96     3    98     2    98 0.97 NADP oxidoreductase coenzyme F420-dependent
NAD_Gly3P_dh_N       PF01210.18   157 sp|Q5HP48|P5CR_STAEQ -            271     0.001   18.8   0.0   1   1   9.4e-07    0.0023   17.6   0.0    40   112    33   102     2   138 0.81 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus
GFO_IDH_MocA         PF01408.17   120 sp|Q5HP48|P5CR_STAEQ -            271    0.0019   18.6   0.0   1   1   1.9e-06    0.0048   17.4   0.0     1    82     1    82     1    88 0.78 Oxidoreductase family, NAD-binding Rossmann fold
ApbA                 PF02558.11   151 sp|Q5HP48|P5CR_STAEQ -            271     0.012   15.0   0.0   1   1     9e-06     0.022   14.1   0.0    36   107    25   102     6   133 0.69 Ketopantoate reductase PanE/ApbA
Shikimate_DH         PF01488.15   135 sp|Q5HP48|P5CR_STAEQ -            271     0.019   15.1   0.0   1   1   2.3e-05     0.057   13.5   0.0    17    86     5    73     1   103 0.74 Shikimate / quinate 5-dehydrogenase
Pantoate_transf      PF02548.10   261 sp|Q5HL35|PANB_STAEQ -            272   2.7e-99  331.5   4.7   1   1  6.3e-103   3.1e-99  331.3   4.7     3   260     2   256     1   257 0.98 Ketopantoate hydroxymethyltransferase
PEP_mutase           PF13714.1    238 sp|Q5HL35|PANB_STAEQ -            272     3e-05   23.3   1.1   1   1   4.3e-08   0.00021   20.5   1.1     2   107     8   116     7   225 0.84 Phosphoenolpyruvate phosphomutase
ComA                 PF02679.10   245 sp|Q5HL35|PANB_STAEQ -            272    0.0098   14.9   0.1   1   1   4.2e-06     0.021   13.8   0.1   106   170   108   181   105   192 0.89 (2R)-phospho-3-sulfolactate synthase (ComA)
Pantoate_ligase      PF02569.10   280 sp|Q5HL36|PANC_STAEQ -            286  4.2e-113  376.7   1.1   1   1  3.3e-117  4.8e-113  376.5   1.1     2   280     3   280     2   280 0.99 Pantoate-beta-alanine ligase
Asp_decarbox         PF02261.11   116 sp|Q5HL37|PAND_STAEQ -            128   6.1e-51  170.8   2.3   1   1   4.8e-55   7.1e-51  170.6   2.3     1   115     1   115     1   116 0.99 Aspartate decarboxylase
DNA_topoisoIV        PF00521.15   426 sp|Q5HPI5|PARC_STAEQ -            800  1.2e-151  505.4   3.9   1   1  1.3e-154  1.9e-151  504.7   3.9     1   425    29   468    29   469 0.98 DNA gyrase/topoisomerase IV, subunit A
DNA_gyraseA_C        PF03989.8     48 sp|Q5HPI5|PARC_STAEQ -            800   4.4e-18   64.3   1.0   2   5   0.00032      0.47    9.8   0.0     1    44   547   593   547   595 0.95 DNA gyrase C-terminal domain, beta-propeller
DNA_gyraseA_C        PF03989.8     48 sp|Q5HPI5|PARC_STAEQ -            800   4.4e-18   64.3   1.0   3   5   3.4e-06    0.0051   16.0   0.1     4    45   606   646   604   649 0.93 DNA gyrase C-terminal domain, beta-propeller
DNA_gyraseA_C        PF03989.8     48 sp|Q5HPI5|PARC_STAEQ -            800   4.4e-18   64.3   1.0   4   5     3e-05     0.044   13.0   0.0     4    42   655   693   652   695 0.94 DNA gyrase C-terminal domain, beta-propeller
DNA_gyraseA_C        PF03989.8     48 sp|Q5HPI5|PARC_STAEQ -            800   4.4e-18   64.3   1.0   5   5   0.00014      0.21   10.8   0.1     1    43   702   746   702   751 0.84 DNA gyrase C-terminal domain, beta-propeller
Hemerythrin          PF01814.18   133 sp|Q5HPI5|PARC_STAEQ -            800    0.0053   16.9   2.2   1   1   9.5e-06     0.014   15.5   2.2    38   109   401   466   360   476 0.74 Hemerythrin HHE cation binding domain
Noelin-1             PF12308.3    101 sp|Q5HPI5|PARC_STAEQ -            800     0.041   13.6   3.4   1   2   0.00052      0.78    9.5   0.2    37    85   338   384   330   404 0.79 Neurogenesis glycoprotein
HALZ                 PF02183.13    45 sp|Q5HPI5|PARC_STAEQ -            800     0.061   13.0   0.9   1   1   0.00012      0.18   11.5   0.9    20    43   432   455   430   457 0.88 Homeobox associated leucine zipper
DUF3028              PF11229.3    589 sp|Q5HPI5|PARC_STAEQ -            800     0.099   10.9   0.1   1   1   9.8e-05      0.15   10.3   0.1   372   452   327   406   297   421 0.85 Protein of unknown function (DUF3028)
DivIC                PF04977.10    80 sp|Q5HPI5|PARC_STAEQ -            800       0.7    9.4   6.9   1   1    0.0002       0.3   10.6   3.4    30    69   430   472   424   474 0.91 Septum formation initiator
FliT                 PF05400.8     84 sp|Q5HPI5|PARC_STAEQ -            800      0.75   10.2   4.9   1   1   0.00043      0.64   10.4   2.3    32    71   436   475   408   479 0.80 Flagellar protein FliT
DNA_gyraseB          PF00204.20   173 sp|Q5HPI6|PARE_STAEQ -            664   1.1e-57  193.9   1.4   1   1   7.1e-61   2.1e-57  193.1   1.4     1   172   224   394   224   395 0.98 DNA gyrase B
DNA_gyraseB_C        PF00986.16    65 sp|Q5HPI6|PARE_STAEQ -            664   2.4e-29  100.8   0.5   1   1   1.5e-32   4.5e-29   99.9   0.5     4    65   570   631   567   631 0.96 DNA gyrase B subunit, carboxyl terminus
Toprim               PF01751.17   100 sp|Q5HPI6|PARE_STAEQ -            664   2.1e-22   78.9   0.0   1   1   1.9e-25   5.7e-22   77.5   0.0     1    98   425   535   425   537 0.97 Toprim domain
HATPase_c            PF02518.21   111 sp|Q5HPI6|PARE_STAEQ -            664   3.1e-18   65.4   0.4   1   1   2.5e-21   7.5e-18   64.2   0.4     2   109    33   173    32   175 0.96 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
HATPase_c_3          PF13589.1    137 sp|Q5HPI6|PARE_STAEQ -            664   2.9e-05   23.7   0.0   1   1   2.9e-08   8.6e-05   22.2   0.0     7    47    41    81    36   124 0.87 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
PEPCK_ATP            PF01293.15   467 sp|Q5HNB7|PCKA_STAEQ -            530  3.3e-222  738.0   0.1   1   1  1.5e-225  3.8e-222  737.8   0.1     3   466    19   483    17   484 0.98 Phosphoenolpyruvate carboxykinase
PEPCK                PF00821.13   587 sp|Q5HNB7|PCKA_STAEQ -            530   0.00021   19.6   0.1   1   1   1.4e-07   0.00035   18.8   0.1   252   369   238   344   214   362 0.77 Phosphoenolpyruvate carboxykinase
AAA_16               PF13191.1    185 sp|Q5HNB7|PCKA_STAEQ -            530     0.039   13.9   0.0   1   1   2.6e-05     0.064   13.2   0.0    11    60   215   273   212   344 0.78 AAA ATPase domain
AAA_33               PF13671.1    143 sp|Q5HNB7|PCKA_STAEQ -            530      0.14   12.0   0.1   1   1   0.00011      0.28   11.0   0.1     1    17   231   247   231   256 0.88 AAA domain
AAA_29               PF13555.1     62 sp|Q5HNB7|PCKA_STAEQ -            530      0.21   11.1   0.7   1   1   0.00018      0.45   10.0   0.0    18    39   224   245   219   263 0.88 P-loop containing region of AAA domain
UvrD_C               PF13361.1    351 sp|Q5HN29|PCRA_STAEQ -            729  1.4e-109  366.8   9.0   2   2  8.3e-113  1.4e-109  366.8   9.0     1   350   276   614   276   615 0.98 UvrD-like helicase C-terminal domain
UvrD-helicase        PF00580.16   315 sp|Q5HN29|PCRA_STAEQ -            729   1.3e-86  290.7   3.3   1   2   7.9e-90   1.3e-86  290.7   3.3     1   314     8   270     8   271 0.97 UvrD/REP helicase N-terminal domain
AAA_19               PF13245.1     76 sp|Q5HN29|PCRA_STAEQ -            729   1.5e-14   53.5   0.0   1   1   2.3e-17   3.7e-14   52.2   0.0     2    74    15    90    14    92 0.87 Part of AAA domain
UvrD_C_2             PF13538.1    104 sp|Q5HN29|PCRA_STAEQ -            729   4.8e-11   42.7   0.0   1   1   1.1e-13   1.9e-10   40.8   0.0    52   103   542   610   486   611 0.73 UvrD-like helicase C-terminal domain
Viral_helicase1      PF01443.13   234 sp|Q5HN29|PCRA_STAEQ -            729   4.7e-09   36.1   0.1   2   3   4.8e-06    0.0079   15.7   0.1    61   208   211   358   177   367 0.69 Viral (Superfamily 1) RNA helicase
Viral_helicase1      PF01443.13   234 sp|Q5HN29|PCRA_STAEQ -            729   4.7e-09   36.1   0.1   3   3   4.6e-05     0.076   12.5   0.0   173   233   541   611   491   612 0.76 Viral (Superfamily 1) RNA helicase
AAA_30               PF13604.1    196 sp|Q5HN29|PCRA_STAEQ -            729   2.8e-06   27.0   0.0   1   1   5.6e-09   9.2e-06   25.3   0.0     2    67     8    73     7   113 0.78 AAA domain
ResIII               PF04851.10   184 sp|Q5HN29|PCRA_STAEQ -            729   0.00011   22.0   0.4   1   1   2.5e-07   0.00042   20.2   0.4     7   155    11   221     2   246 0.84 Type III restriction enzyme, res subunit
DEAD                 PF00270.24   169 sp|Q5HN29|PCRA_STAEQ -            729      0.12   11.8   0.2   1   1   0.00047      0.77    9.2   0.2     4    82    12    79     9   244 0.82 DEAD/DEAH box helicase
PcrB                 PF01884.12   231 sp|Q5HN28|PCRB_STAEQ -            230   4.9e-59  199.3   3.9   1   1   1.2e-62   5.8e-59  199.1   3.9     1   227     2   223     2   228 0.97 PcrB family
Methyltransf_3       PF01596.12   205 sp|Q5HN28|PCRB_STAEQ -            230   0.00025   20.1   0.3   1   2   2.1e-07     0.001   18.1   0.1   114   173    68   131    54   151 0.74 O-methyltransferase
Trp_syntA            PF00290.15   259 sp|Q5HN28|PCRB_STAEQ -            230    0.0014   17.1   0.1   1   1   6.5e-07    0.0032   16.0   0.1   194   241   177   224   156   230 0.80 Tryptophan synthase alpha chain
Glycos_transf_3      PF00591.16   253 sp|Q5HM85|PDP_STAEQ  -            433   1.1e-46  159.3   8.2   1   1     4e-50   1.5e-46  158.8   8.2     3   253    77   306    75   306 0.98 Glycosyl transferase family, a/b domain
PYNP_C               PF07831.8     75 sp|Q5HM85|PDP_STAEQ  -            433   2.5e-26   90.9   1.1   1   1   2.3e-29   8.5e-26   89.2   1.1     1    74   345   417   345   418 0.98 Pyrimidine nucleoside phosphorylase C-terminal domain
Glycos_trans_3N      PF02885.12    66 sp|Q5HM85|PDP_STAEQ  -            433   3.5e-17   61.7   0.0   1   1   2.6e-20   9.6e-17   60.3   0.0     2    65     3    66     2    67 0.96 Glycosyl transferase family, helical bundle domain
Kinase-PPPase        PF03618.9    255 sp|Q5HNY5|PDRP1_STAEQ -            272   1.3e-90  303.3   0.0   1   1     2e-94   1.5e-90  303.1   0.0     1   255     6   263     6   263 0.97 Kinase/pyrophosphorylase
Kinase-PPPase        PF03618.9    255 sp|Q5HL18|PDRP2_STAEQ -            272   1.2e-89  300.1   1.5   1   1   1.9e-93   1.4e-89  299.9   1.5     1   254    10   265    10   266 0.98 Kinase/pyrophosphorylase
DUF473               PF04322.7    119 sp|Q5HL18|PDRP2_STAEQ -            272     0.079   12.5   0.0   1   1   2.3e-05      0.17   11.5   0.0    10    41   203   234   195   243 0.87 Protein of unknown function (DUF473)
Phos_pyr_kin         PF08543.7    246 sp|Q5HRG7|PDXK_STAEQ -            276   1.2e-75  253.9   0.4   1   1   1.8e-79   1.4e-75  253.7   0.4     1   246    13   259    13   259 0.96 Phosphomethylpyrimidine kinase
PfkB                 PF00294.19   301 sp|Q5HRG7|PDXK_STAEQ -            276   2.5e-11   43.2   0.1   1   1   4.8e-15   3.5e-11   42.7   0.1   172   290   122   246    96   253 0.82 pfkB family carbohydrate kinase
SOR_SNZ              PF01680.12   209 sp|Q5HRN5|PDXS_STAEQ -            295    2e-110  367.2   7.9   1   1  2.3e-113  2.6e-110  366.9   7.9     2   209     6   213     5   213 0.99 SOR/SNZ family
ThiG                 PF05690.9    247 sp|Q5HRN5|PDXS_STAEQ -            295   1.9e-12   46.7   5.4   1   2   5.1e-05     0.058   12.4   2.3   136   200    31   101    15   117 0.78 Thiazole biosynthesis protein ThiG
ThiG                 PF05690.9    247 sp|Q5HRN5|PDXS_STAEQ -            295   1.9e-12   46.7   5.4   2   2   6.7e-12   7.7e-09   34.9   0.1   165   225   195   257   176   271 0.90 Thiazole biosynthesis protein ThiG
Dus                  PF01207.12   310 sp|Q5HRN5|PDXS_STAEQ -            295   2.4e-06   26.6   0.1   2   2   1.6e-06    0.0018   17.1   0.0   170   228   192   254   184   276 0.79 Dihydrouridine synthase (Dus)
IGPS                 PF00218.16   254 sp|Q5HRN5|PDXS_STAEQ -            295   7.1e-06   25.2   0.6   2   2   5.7e-08   6.5e-05   22.1   0.0   177   253   171   251   156   252 0.84 Indole-3-glycerol phosphate synthase
His_biosynth         PF00977.16   229 sp|Q5HRN5|PDXS_STAEQ -            295   1.5e-05   24.3   0.7   2   3   3.2e-06    0.0036   16.5   0.0   177   227   191   243   138   245 0.83 Histidine biosynthesis protein
NMO                  PF03060.10   330 sp|Q5HRN5|PDXS_STAEQ -            295   8.5e-05   21.8   6.2   2   2   2.9e-07   0.00033   19.8   0.0   180   227   195   244   187   263 0.84 Nitronate monooxygenase
NanE                 PF04131.9    192 sp|Q5HRN5|PDXS_STAEQ -            295   8.9e-05   21.5   1.0   2   2   2.9e-06    0.0033   16.4   0.0   134   190   194   252   185   255 0.79 Putative N-acetylmannosamine-6-phosphate epimerase
OMPdecase            PF00215.19   226 sp|Q5HRN5|PDXS_STAEQ -            295   0.00031   20.1   0.0   1   2   0.00057      0.65    9.3   0.0    79   157   137   216   132   226 0.84 Orotidine 5'-phosphate decarboxylase / HUMPS family
OMPdecase            PF00215.19   226 sp|Q5HRN5|PDXS_STAEQ -            295   0.00031   20.1   0.0   2   2   0.00051      0.58    9.5   0.0   194   226   220   252   211   252 0.81 Orotidine 5'-phosphate decarboxylase / HUMPS family
DUF561               PF04481.7    243 sp|Q5HRN5|PDXS_STAEQ -            295    0.0011   17.9   0.1   2   2    0.0001      0.12   11.3   0.0   164   232   179   254   159   263 0.79 Protein of unknown function (DUF561)
FMN_dh               PF01070.13   357 sp|Q5HRN5|PDXS_STAEQ -            295    0.0056   15.5   0.4   1   1   1.1e-05     0.012   14.4   0.0   210   252   190   235   111   240 0.59 FMN-dependent dehydrogenase
TMP-TENI             PF02581.12   180 sp|Q5HRN5|PDXS_STAEQ -            295      0.02   14.0   1.1   2   2    0.0003      0.35    9.9   0.1   138   180   194   239   185   239 0.85 Thiamine monophosphate synthase/TENI
PcrB                 PF01884.12   231 sp|Q5HRN5|PDXS_STAEQ -            295     0.024   13.9   1.2   2   2   4.8e-05     0.055   12.7   0.0   186   229   211   254   184   256 0.83 PcrB family
Trp_syntA            PF00290.15   259 sp|Q5HRN5|PDXS_STAEQ -            295     0.051   12.1   0.0   1   1   8.4e-05     0.096   11.2   0.0   188   232   195   242   184   265 0.78 Tryptophan synthase alpha chain
SNO                  PF01174.14   188 sp|Q5HRN4|PDXT_STAEQ -            186   7.5e-71  237.6   0.0   1   1   2.9e-74   8.5e-71  237.4   0.0     1   187     6   184     6   185 0.97 SNO glutamine amidotransferase family
GATase_3             PF07685.9    158 sp|Q5HRN4|PDXT_STAEQ -            186   3.9e-06   26.5   0.0   1   1   1.7e-09   5.1e-06   26.1   0.0     3   108    34   127    32   172 0.74 CobB/CobQ-like glutamine amidotransferase domain
GATase               PF00117.23   192 sp|Q5HRN4|PDXT_STAEQ -            186   6.5e-06   25.7   0.0   1   1   3.1e-09   9.1e-06   25.2   0.0    38   178    34   172     8   185 0.69 Glutamine amidotransferase class-I
Peptidase_S51        PF03575.12   154 sp|Q5HRN4|PDXT_STAEQ -            186     0.053   13.2   0.0   1   1   2.7e-05      0.08   12.6   0.0    28    90    31    90     9   106 0.82 Peptidase family S51
Peptidase_M20        PF01546.23   189 sp|Q5HQY6|PEPT_STAEQ -            412   4.3e-15   55.7   0.1   1   1   1.5e-18   7.7e-15   54.8   0.1    35   188   139   402   115   403 0.80 Peptidase family M20/M25/M40
M20_dimer            PF07687.9    112 sp|Q5HQY6|PEPT_STAEQ -            412   4.2e-09   36.1   0.0   1   1   1.9e-12   9.3e-09   35.0   0.0     3   109   208   304   206   309 0.87 Peptidase dimerisation domain
Peptidase_M42        PF05343.9    292 sp|Q5HQY6|PEPT_STAEQ -            412   5.4e-05   22.0   0.0   1   2   7.9e-07    0.0039   16.0   0.0   134   197   140   205   125   255 0.87 M42 glutamyl aminopeptidase
Peptidase_M20        PF01546.23   189 sp|Q5HNF9|PEPVL_STAEQ -            469   7.4e-25   87.5   0.0   1   1   1.5e-28   1.1e-24   87.0   0.0     4   187    83   462    80   464 0.89 Peptidase family M20/M25/M40
M20_dimer            PF07687.9    112 sp|Q5HNF9|PEPVL_STAEQ -            469   7.5e-08   32.0   0.0   1   2   2.4e-05      0.17   11.5   0.0    31   109   124   248   106   251 0.79 Peptidase dimerisation domain
M20_dimer            PF07687.9    112 sp|Q5HNF9|PEPVL_STAEQ -            469   7.5e-08   32.0   0.0   2   2   4.5e-07    0.0033   17.1   0.0    11    67   261   336   256   375 0.86 Peptidase dimerisation domain
FUR                  PF01475.14   120 sp|Q5HN74|PERR_STAEQ -            150   1.2e-40  138.1   0.3   1   1   8.3e-44   1.5e-40  137.8   0.3     1   120    21   139    21   139 0.99 Ferric uptake regulator family
HTH_20               PF12840.2     61 sp|Q5HN74|PERR_STAEQ -            150    0.0017   18.1   0.0   1   1   1.7e-06    0.0031   17.2   0.0    10    56    28    80    25    85 0.89 Helix-turn-helix domain
HTH_11               PF08279.7     55 sp|Q5HN74|PERR_STAEQ -            150     0.033   13.8   0.0   2   2   0.00038      0.71    9.5   0.0     2    43    30    76    29    81 0.87 HTH domain
Yippee-Mis18         PF03226.9     96 sp|Q5HN74|PERR_STAEQ -            150     0.074   13.0   0.0   1   1     4e-05     0.074   13.0   0.0    36    86    73   130    27   140 0.73 Yippee zinc-binding/DNA-binding /Mis18, centromere assembly
E6                   PF00518.12   110 sp|Q5HN74|PERR_STAEQ -            150     0.078   13.3   0.9   2   2   0.00011       0.2   12.0   0.1     6    39   114   147   109   150 0.91 Early Protein (E6)
DUF2082              PF09855.4     64 sp|Q5HN74|PERR_STAEQ -            150      0.15   11.9   2.6   1   2   0.00016      0.29   10.9   0.2    19    43    82   106    78   128 0.87 Nucleic-acid-binding protein containing Zn-ribbon domain (DUF2082)
TF_Zn_Ribbon         PF08271.7     43 sp|Q5HN74|PERR_STAEQ -            150      0.16   11.3   3.6   1   2    0.0002      0.37   10.1   0.0     9    32    89   112    85   116 0.75 TFIIB zinc-binding
PFK                  PF00365.15   282 sp|Q5HNK6|PFKA_STAEQ -            322  1.9e-120  401.1   5.4   1   1  4.3e-124  2.1e-120  400.9   5.4     1   280     2   277     2   279 0.97 Phosphofructokinase
NAD_kinase           PF01513.16   285 sp|Q5HNK6|PFKA_STAEQ -            322    0.0096   14.7   0.0   1   1   3.5e-06     0.017   13.8   0.0    63   107    80   125    53   127 0.85 ATP-NAD kinase
AhpC-TSA_2           PF13911.1    115 sp|Q5HNK6|PFKA_STAEQ -            322     0.026   14.4   0.0   1   3   0.00013      0.63    9.9   0.0    87   103    45    71     9    82 0.70 AhpC/TSA antioxidant enzyme
Radical_SAM          PF04055.16   166 sp|Q5HKI0|PFLA_STAEQ -            251   4.9e-28   98.3   0.0   1   1   1.4e-31   6.7e-28   97.9   0.0     2   165    24   188    23   189 0.95 Radical SAM superfamily
Fer4_12              PF13353.1    139 sp|Q5HKI0|PFLA_STAEQ -            251   7.4e-20   71.4   0.0   1   1     2e-23     1e-19   71.0   0.0     1   129    15   147    15   155 0.83 4Fe-4S single cluster domain
Fer4_14              PF13394.1    119 sp|Q5HKI0|PFLA_STAEQ -            251   1.6e-10   41.0   0.1   1   1     7e-14   3.5e-10   39.9   0.1     2    87    25   106    23   139 0.75 4Fe-4S single cluster domain
PGM_PMM_I            PF02878.11   138 sp|Q5HLD2|PGCA_STAEQ -            546   1.1e-42  144.7   0.0   1   1   8.6e-46   2.1e-42  143.8   0.0     2   133    34   168    33   172 0.97 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I
PGM_PMM_II           PF02879.11   104 sp|Q5HLD2|PGCA_STAEQ -            546   3.5e-22   78.7   0.1   1   1   2.7e-25   6.6e-22   77.8   0.1     1   101   197   300   197   303 0.95 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II
PGM_PMM_III          PF02880.11   113 sp|Q5HLD2|PGCA_STAEQ -            546   9.6e-15   54.6   0.0   1   1   6.6e-18   1.6e-14   53.8   0.0     1   108   309   425   309   430 0.85 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III
PGM_PMM_IV           PF00408.15    73 sp|Q5HLD2|PGCA_STAEQ -            546     1e-08   35.0   0.0   1   1   1.4e-11   3.5e-08   33.3   0.0    14    54   476   526   442   542 0.83 Phosphoglucomutase/phosphomannomutase, C-terminal domain
E2_bind              PF08825.5     84 sp|Q5HLD2|PGCA_STAEQ -            546     0.039   13.6   0.3   1   1   3.9e-05     0.095   12.4   0.0     3    59   156   210   154   221 0.84 E2 binding domain
DUF3166              PF11365.3     97 sp|Q5HLD2|PGCA_STAEQ -            546      0.16   12.4   0.0   1   1   0.00012       0.3   11.5   0.0    18    89   403   475   392   480 0.90 Protein of unknown function (DUF3166)
PGK                  PF00162.14   384 sp|Q5HQV3|PGK_STAEQ  -            396  4.6e-153  509.3   1.4   1   1  3.6e-157  5.3e-153  509.1   1.4     2   384     6   385     5   385 0.99 Phosphoglycerate kinase
CDP-OH_P_transf      PF01066.16   101 sp|Q5HPQ8|PGSA_STAEQ -            193   3.7e-15   56.0   4.8   1   2   2.5e-19   3.7e-15   56.0   4.8     3    97     2   108     1   122 0.82 CDP-alcohol phosphatidyltransferase
ABC_tran             PF00005.22   137 sp|Q5HKQ8|PHNC_STAEQ -            257   4.6e-34  117.6   0.1   1   1   9.7e-37     6e-34  117.2   0.1     1   137    20   176    20   176 0.98 ABC transporter
AAA_21               PF13304.1    303 sp|Q5HKQ8|PHNC_STAEQ -            257   1.9e-10   41.1   0.3   1   1   1.3e-10   7.8e-08   32.6   0.3     1   294    32   203    32   206 0.78 AAA domain
AAA_15               PF13175.1    415 sp|Q5HKQ8|PHNC_STAEQ -            257   6.1e-06   25.5   0.7   1   2     4e-05     0.025   13.6   0.1    13    43    21    54     5   156 0.70 AAA ATPase domain
AAA_15               PF13175.1    415 sp|Q5HKQ8|PHNC_STAEQ -            257   6.1e-06   25.5   0.7   2   2   0.00023      0.14   11.1   0.1   371   407   165   203   142   210 0.89 AAA ATPase domain
DUF258               PF03193.11   161 sp|Q5HKQ8|PHNC_STAEQ -            257   3.6e-05   23.0   0.1   1   1   9.5e-08   5.9e-05   22.3   0.1    22    69    16    64     2    85 0.80 Protein of unknown function, DUF258
AAA_22               PF13401.1    131 sp|Q5HKQ8|PHNC_STAEQ -            257   0.00066   19.8   0.4   1   1   7.2e-06    0.0044   17.1   0.4     3    32    29    58    27   206 0.68 AAA domain
AAA_16               PF13191.1    185 sp|Q5HKQ8|PHNC_STAEQ -            257    0.0012   18.8   0.3   1   1     5e-06    0.0031   17.5   0.3    23    83    29    91    20   198 0.63 AAA ATPase domain
AAA_30               PF13604.1    196 sp|Q5HKQ8|PHNC_STAEQ -            257    0.0013   18.3   0.0   1   1   3.9e-06    0.0024   17.4   0.0    17    61    29    75    24    87 0.77 AAA domain
AAA_25               PF13481.1    194 sp|Q5HKQ8|PHNC_STAEQ -            257    0.0018   17.7   0.0   1   2   0.00024      0.15   11.4   0.0    30    50    27    47    19    50 0.90 AAA domain
MutS_V               PF00488.16   235 sp|Q5HKQ8|PHNC_STAEQ -            257    0.0037   16.6   0.1   1   2    0.0015      0.92    8.8   0.0    34    63    21    50     9    54 0.88 MutS domain V
AAA_29               PF13555.1     62 sp|Q5HKQ8|PHNC_STAEQ -            257    0.0041   16.6   0.1   1   1   1.3e-05    0.0079   15.6   0.1    20    41    28    48    18    53 0.80 P-loop containing region of AAA domain
AAA_23               PF13476.1    202 sp|Q5HKQ8|PHNC_STAEQ -            257    0.0084   16.4   1.4   1   1   4.1e-05     0.025   14.8   1.4    11    38    21    49    13   205 0.94 AAA domain
AAA_33               PF13671.1    143 sp|Q5HKQ8|PHNC_STAEQ -            257    0.0087   15.9   0.1   1   1   2.4e-05     0.015   15.1   0.1     3    21    34    52    32   221 0.89 AAA domain
AAA_17               PF13207.1    121 sp|Q5HKQ8|PHNC_STAEQ -            257    0.0093   16.7   0.5   1   1   4.3e-05     0.026   15.3   0.5     3    41    34    68    33   252 0.81 AAA domain
ABC_ATPase           PF09818.4    448 sp|Q5HKQ8|PHNC_STAEQ -            257     0.014   13.9   0.1   1   2   0.00099      0.61    8.5   0.0   240   266    25    52    19    60 0.90 Predicted ATPase of the ABC class
AAA_10               PF12846.2    304 sp|Q5HKQ8|PHNC_STAEQ -            257     0.032   13.6   0.0   1   1   0.00011     0.065   12.6   0.0     4    29    33    59    31    81 0.82 AAA-like domain
AAA_18               PF13238.1    129 sp|Q5HKQ8|PHNC_STAEQ -            257     0.035   14.4   0.3   1   1   0.00013     0.079   13.2   0.3     2    42    34    92    34   240 0.88 AAA domain
MMR_HSR1             PF01926.18   116 sp|Q5HKQ8|PHNC_STAEQ -            257     0.053   13.4   0.1   1   1   0.00021      0.13   12.2   0.1     2    20    33    51    32   109 0.84 50S ribosome-binding GTPase
Miro                 PF08477.8    119 sp|Q5HKQ8|PHNC_STAEQ -            257     0.069   13.6   0.0   1   1   0.00022      0.14   12.6   0.0     3    45    34    79    33   104 0.66 Miro-like protein
Arch_ATPase          PF01637.13   234 sp|Q5HKQ8|PHNC_STAEQ -            257     0.079   12.6   0.0   1   1   0.00019      0.12   12.0   0.0     8    51    20    60    17   140 0.81 Archaeal ATPase
SbcCD_C              PF13558.1     90 sp|Q5HKQ8|PHNC_STAEQ -            257     0.083   12.8   0.1   1   1   0.00079      0.49   10.3   0.1    26    88   141   190   133   192 0.82 Putative exonuclease SbcCD, C subunit
Zeta_toxin           PF06414.7    201 sp|Q5HKQ8|PHNC_STAEQ -            257     0.087   11.9   0.0   1   1   0.00025      0.15   11.1   0.0    18    49    32    64    21    72 0.83 Zeta toxin
NB-ARC               PF00931.17   287 sp|Q5HKQ8|PHNC_STAEQ -            257      0.13   11.0   0.1   1   1   0.00035      0.21   10.3   0.1    21    46    32    57    21    78 0.87 NB-ARC domain
PEPCK_ATP            PF01293.15   467 sp|Q5HKQ8|PHNC_STAEQ -            257      0.19   10.2   0.0   1   1   0.00044      0.27    9.6   0.0   209   231    28    50    19    63 0.83 Phosphoenolpyruvate carboxykinase
FA_synthesis         PF02504.10   323 sp|Q5HPW2|PLSX_STAEQ -            325  2.9e-110  368.1   8.5   1   1  4.5e-114  3.3e-110  367.9   8.5     1   321     2   316     2   318 0.98 Fatty acid synthesis protein
PTA_PTB              PF01515.14   319 sp|Q5HPW2|PLSX_STAEQ -            325   0.00028   20.0   0.1   1   1   6.2e-08   0.00046   19.3   0.1    81   221    53   193    17   220 0.84 Phosphate acetyl/butaryl transferase
G3P_acyltransf       PF02660.10   178 sp|Q5HPI7|PLSY_STAEQ -            202   5.7e-56  188.8  21.4   1   1   4.4e-60   6.6e-56  188.6  21.4     1   178     8   192     8   192 0.94 Glycerol-3-phosphate acyltransferase
RNase_PH             PF01138.16   132 sp|Q5HPR7|PNP_STAEQ  -            701   1.2e-42  145.3   0.0   1   2     5e-26   9.2e-23   81.0   0.0     2   132    14   144    13   144 0.93 3' exoribonuclease family, domain 1
RNase_PH             PF01138.16   132 sp|Q5HPR7|PNP_STAEQ  -            701   1.2e-42  145.3   0.0   2   2   3.1e-20   5.7e-17   62.2   0.0     1   132   327   460   327   460 0.90 3' exoribonuclease family, domain 1
RNase_PH_C           PF03725.10    68 sp|Q5HPR7|PNP_STAEQ  -            701   5.7e-28   96.6   2.8   1   2     7e-17   1.3e-13   50.6   0.1     1    67   147   210   147   211 0.93 3' exoribonuclease family, domain 2
RNase_PH_C           PF03725.10    68 sp|Q5HPR7|PNP_STAEQ  -            701   5.7e-28   96.6   2.8   2   2   2.3e-15   4.2e-12   45.8   0.4     1    68   463   533   463   533 0.93 3' exoribonuclease family, domain 2
S1                   PF00575.18    74 sp|Q5HPR7|PNP_STAEQ  -            701   1.1e-20   73.4   1.4   1   1   1.4e-23   2.5e-20   72.3   1.4     2    70   623   690   622   694 0.94 S1 RNA binding domain
PNPase               PF03726.9     83 sp|Q5HPR7|PNP_STAEQ  -            701   7.6e-13   48.5   2.5   1   2   4.1e-16   7.6e-13   48.5   2.5     2    83   242   324   241   324 0.89 Polyribonucleotide nucleotidyltransferase, RNA binding domain
KH_1                 PF00013.24    60 sp|Q5HPR7|PNP_STAEQ  -            701   4.1e-11   42.3   4.6   1   1   2.2e-14   4.1e-11   42.3   4.6     2    60   560   616   559   616 0.93 KH domain
KH_3                 PF13014.1     43 sp|Q5HPR7|PNP_STAEQ  -            701   1.9e-07   30.5   2.3   1   1     1e-10   1.9e-07   30.5   2.3     1    37   568   597   568   602 0.89 KH domain
S1_2                 PF13509.1     61 sp|Q5HPR7|PNP_STAEQ  -            701    0.0011   18.8   1.9   2   2   3.1e-06    0.0057   16.5   0.1     1    46   625   678   625   691 0.86 S1 domain
KH_5                 PF13184.1     69 sp|Q5HPR7|PNP_STAEQ  -            701      0.27   11.0   2.7   1   1    0.0002      0.38   10.6   0.3     6    44   558   593   556   598 0.91 NusA-like KH domain
ABC_tran             PF00005.22   137 sp|Q5HQ70|POTA_STAEQ -            364   1.2e-33  116.3   0.0   1   1   4.8e-36   2.9e-33  115.0   0.0     1   135    20   161    20   163 0.97 ABC transporter
TOBE_2               PF08402.5     75 sp|Q5HQ70|POTA_STAEQ -            364   1.7e-10   40.7   0.0   1   1   4.7e-13   2.8e-10   40.0   0.0     1    75   273   342   273   342 0.89 TOBE domain
AAA_21               PF13304.1    303 sp|Q5HQ70|POTA_STAEQ -            364   4.2e-08   33.4   1.6   1   2   5.8e-05     0.035   14.0   0.1     4    41    35    55    32    73 0.74 AAA domain
AAA_21               PF13304.1    303 sp|Q5HQ70|POTA_STAEQ -            364   4.2e-08   33.4   1.6   2   2   1.6e-06   0.00097   19.1   0.1   215   298    94   194    54   200 0.70 AAA domain
SMC_N                PF02463.14   220 sp|Q5HQ70|POTA_STAEQ -            364     2e-05   23.9   0.1   1   1   8.7e-08   5.2e-05   22.5   0.1    21   210    26   206    13   215 0.82 RecF/RecN/SMC N terminal domain
AAA_22               PF13401.1    131 sp|Q5HQ70|POTA_STAEQ -            364   0.00012   22.1   1.4   1   1   1.3e-06   0.00075   19.6   1.4     5   125    31   194    27   199 0.75 AAA domain
AAA_17               PF13207.1    121 sp|Q5HQ70|POTA_STAEQ -            364   0.00021   22.1   0.1   1   2   8.8e-06    0.0052   17.5   0.0     6    42    37    71    33   134 0.71 AAA domain
AAA                  PF00004.24   132 sp|Q5HQ70|POTA_STAEQ -            364    0.0028   17.8   2.2   1   1   6.2e-05     0.037   14.2   2.2     3    68    35   162    33   200 0.52 ATPase family associated with various cellular activities (AAA)
AAA_25               PF13481.1    194 sp|Q5HQ70|POTA_STAEQ -            364    0.0044   16.4   0.0   1   2   7.1e-05     0.042   13.2   0.0    11    54     6    51     2    78 0.83 AAA domain
AAA_28               PF13521.1    163 sp|Q5HQ70|POTA_STAEQ -            364    0.0051   16.7   0.2   1   2    0.0017      0.98    9.3   0.0     3    20    34    51    32    61 0.85 AAA domain
AAA_15               PF13175.1    415 sp|Q5HQ70|POTA_STAEQ -            364      0.02   13.9   0.2   1   2   0.00059      0.35    9.8   0.0    16    57    23    73     5   128 0.60 AAA ATPase domain
AAA_23               PF13476.1    202 sp|Q5HQ70|POTA_STAEQ -            364     0.027   14.8   1.8   1   1   0.00011     0.063   13.5   1.8    11    40    21    51    12   184 0.87 AAA domain
Arch_ATPase          PF01637.13   234 sp|Q5HQ70|POTA_STAEQ -            364     0.027   14.1   0.3   1   1   9.6e-05     0.057   13.1   0.3    18    41    28    51    17   192 0.82 Archaeal ATPase
AAA_14               PF13173.1    128 sp|Q5HQ70|POTA_STAEQ -            364     0.035   14.0   0.1   1   1   0.00019      0.12   12.3   0.0     5    35    33    64    30   117 0.76 AAA domain
ABC_ATPase           PF09818.4    448 sp|Q5HQ70|POTA_STAEQ -            364     0.036   12.6   0.1   1   1   0.00032      0.19   10.2   0.1   323   411   135   208   125   220 0.74 Predicted ATPase of the ABC class
Rad17                PF03215.10   519 sp|Q5HQ70|POTA_STAEQ -            364     0.066   11.8   0.0   1   1   0.00019      0.11   11.1   0.0    50    66    35    51    15   114 0.84 Rad17 cell cycle checkpoint protein
DUF258               PF03193.11   161 sp|Q5HQ70|POTA_STAEQ -            364     0.083   12.0   0.0   1   1   0.00022      0.13   11.4   0.0    26    59    20    54     8   124 0.81 Protein of unknown function, DUF258
AAA_5                PF07728.9    139 sp|Q5HQ70|POTA_STAEQ -            364     0.085   12.5   0.1   1   2    0.0012      0.73    9.5   0.0     4    20    35    51    33    55 0.91 AAA domain (dynein-related subfamily)
AAA_18               PF13238.1    129 sp|Q5HQ70|POTA_STAEQ -            364     0.088   13.1   0.0   1   1   0.00036      0.21   11.8   0.0     3    29    35    61    34   124 0.73 AAA domain
AAA_16               PF13191.1    185 sp|Q5HQ70|POTA_STAEQ -            364       0.1   12.5   0.8   1   1   0.00044      0.26   11.2   0.8    28    45    34    50    24   203 0.61 AAA ATPase domain
AAA_19               PF13245.1     76 sp|Q5HQ70|POTA_STAEQ -            364      0.11   12.2   0.0   1   1   0.00043      0.25   11.1   0.0    15    35    35    54    29    81 0.84 Part of AAA domain
AAA_10               PF12846.2    304 sp|Q5HQ70|POTA_STAEQ -            364      0.12   11.8   0.6   1   2   0.00087      0.52    9.7   0.1     5    34    34    63    30   151 0.81 AAA-like domain
AAA_29               PF13555.1     62 sp|Q5HQ70|POTA_STAEQ -            364      0.12   11.9   0.0   1   1   0.00042      0.25   10.9   0.0    17    40    25    47    18    58 0.82 P-loop containing region of AAA domain
DHHA2                PF02833.9    127 sp|Q5HN17|PPAC_STAEQ -            309   2.6e-36  124.6   3.2   2   2   4.9e-40   3.6e-36  124.1   2.2     2   127   182   307   181   307 0.99 DHHA2 domain
DHH                  PF01368.15   145 sp|Q5HN17|PPAC_STAEQ -            309     3e-26   91.7   0.9   1   2   6.3e-30   4.6e-26   91.1   0.2     7   145     3   147     1   147 0.97 DHH family
Pro_isomerase        PF00160.16   155 sp|Q5HQK8|PPI1_STAEQ -            197   1.7e-47  161.4   0.1   1   1   1.4e-51     2e-47  161.2   0.1     2   154    18   194    17   195 0.86 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD
PP_kinase_C          PF13090.1    353 sp|Q5HLE0|PPK_STAEQ  -            721  2.2e-155  516.6   3.3   2   2  8.9e-159  2.2e-155  516.6   3.3     5   352   339   684   335   685 0.98 Polyphosphate kinase C-terminal domain
PP_kinase            PF02503.12   207 sp|Q5HLE0|PPK_STAEQ  -            721   8.4e-61  205.0   0.4   1   1   5.8e-64   1.4e-60  204.3   0.4     5   206   133   330   129   331 0.94 Polyphosphate kinase middle domain
PP_kinase_N          PF13089.1    109 sp|Q5HLE0|PPK_STAEQ  -            721   1.7e-38  131.0   0.6   1   1   1.7e-41   4.2e-38  129.7   0.6     1   108    15   122    15   123 0.98 Polyphosphate kinase N-terminal domain
PLDc_2               PF13091.1    126 sp|Q5HLE0|PPK_STAEQ  -            721   7.1e-12   45.1   3.7   1   2   4.4e-11   1.1e-07   31.6   0.5    19   124   378   494   357   496 0.81 PLD-like domain
PLDc_2               PF13091.1    126 sp|Q5HLE0|PPK_STAEQ  -            721   7.1e-12   45.1   3.7   2   2   1.6e-05      0.04   13.6   0.1     3   122   528   645   526   649 0.72 PLD-like domain
DUF1669              PF07894.7    284 sp|Q5HLE0|PPK_STAEQ  -            721    0.0099   15.0   0.1   2   2    0.0004      0.99    8.5   0.1   135   180   522   566   514   569 0.88 Protein of unknown function (DUF1669)
DicB                 PF05358.6     62 sp|Q5HLE0|PPK_STAEQ  -            721     0.052   13.0   0.2   2   2   0.00012      0.29   10.6   0.1     7    32   465   490   461   494 0.90 DicB protein
PrmA                 PF06325.8    295 sp|Q5HNW8|PRMA_STAEQ -            312  8.7e-104  346.7   1.2   1   1  1.1e-106  9.8e-104  346.6   1.2     1   294     2   309     2   310 0.92 Ribosomal protein L11 methyltransferase (PrmA)
MTS                  PF05175.9    170 sp|Q5HNW8|PRMA_STAEQ -            312   2.7e-14   52.8   0.1   1   1   7.5e-17   6.5e-14   51.6   0.1    27   136   167   269   144   304 0.78 Methyltransferase small domain
Methyltransf_31      PF13847.1    152 sp|Q5HNW8|PRMA_STAEQ -            312   7.8e-10   38.5   2.3   1   1   9.1e-13     8e-10   38.5   1.0     3   126   173   287   171   308 0.78 Methyltransferase domain
Methyltransf_18      PF12847.2    112 sp|Q5HNW8|PRMA_STAEQ -            312   8.5e-09   35.9   0.1   1   1   2.3e-11     2e-08   34.7   0.0     1   108   173   270   173   274 0.86 Methyltransferase domain
Methyltransf_26      PF13659.1    117 sp|Q5HNW8|PRMA_STAEQ -            312   2.4e-06   27.5   0.0   1   1   4.3e-09   3.7e-06   26.9   0.0     2    78   175   247   174   268 0.89 Methyltransferase domain
Methyltransf_23      PF13489.1    161 sp|Q5HNW8|PRMA_STAEQ -            312   1.2e-05   25.0   0.0   1   2   1.2e-07    0.0001   22.0   0.0    10   112   164   270   156   278 0.71 Methyltransferase domain
Methyltransf_25      PF13649.1    101 sp|Q5HNW8|PRMA_STAEQ -            312   1.9e-05   24.9   0.0   1   1   4.4e-08   3.9e-05   23.9   0.0     1    86   177   256   177   265 0.77 Methyltransferase domain
Met_10               PF02475.11   200 sp|Q5HNW8|PRMA_STAEQ -            312   5.7e-05   22.7   0.1   1   1   1.2e-07    0.0001   21.9   0.1    96   189   168   260   120   272 0.85 Met-10+ like-protein
Methyltransf_11      PF08241.7     95 sp|Q5HNW8|PRMA_STAEQ -            312   0.00011   22.5   0.0   1   1   2.3e-07    0.0002   21.7   0.0     1    94   178   270   178   271 0.89 Methyltransferase domain
UPF0020              PF01170.13   180 sp|Q5HNW8|PRMA_STAEQ -            312    0.0002   20.9   0.1   1   1   4.1e-07   0.00036   20.1   0.1    26   113   171   246   165   247 0.93 Putative RNA methylase family UPF0020
Methyltransf_12      PF08242.7     99 sp|Q5HNW8|PRMA_STAEQ -            312   0.00029   21.2   0.1   1   1   8.2e-07   0.00071   19.9   0.1     2    92   179   262   178   269 0.73 Methyltransferase domain
PCMT                 PF01135.14   210 sp|Q5HNW8|PRMA_STAEQ -            312    0.0057   16.2   0.1   1   1   1.2e-05     0.011   15.3   0.1    62   125   160   223   154   307 0.82 Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT)
Methyltransf_3       PF01596.12   205 sp|Q5HNW8|PRMA_STAEQ -            312    0.0067   15.5   0.0   1   1   1.4e-05     0.012   14.6   0.0    49   105   177   231   159   241 0.87 O-methyltransferase
RrnaAD               PF00398.15   262 sp|Q5HNW8|PRMA_STAEQ -            312      0.02   13.9   0.0   1   1   3.7e-05     0.032   13.2   0.0    28    92   171   239   160   279 0.79 Ribosomal RNA adenine dimethylase
TRM                  PF02005.11   377 sp|Q5HNW8|PRMA_STAEQ -            312     0.068   12.0   0.4   1   2   0.00012      0.11   11.4   0.2    52   124   176   242    68   246 0.79 N2,N2-dimethylguanosine tRNA methyltransferase
GCD14                PF08704.5    247 sp|Q5HNW8|PRMA_STAEQ -            312     0.075   12.5   0.0   1   1   0.00012      0.11   12.0   0.0    38    95   171   226   158   297 0.85 tRNA methyltransferase complex GCD14 subunit
DUF633               PF04816.7    205 sp|Q5HNW8|PRMA_STAEQ -            312     0.083   12.2   4.0   2   2   7.3e-05     0.064   12.5   1.4     3    94   179   266   177   295 0.83 Family of unknown function (DUF633)
MFS_1                PF07690.11   352 sp|Q5HRH0|PROP_STAEQ -            464   3.3e-40  137.8  53.2   1   2   1.1e-35   3.4e-32  111.5  29.2     4   347    17   381    14   383 0.75 Major Facilitator Superfamily
MFS_1                PF07690.11   352 sp|Q5HRH0|PROP_STAEQ -            464   3.3e-40  137.8  53.2   2   2   4.9e-14   1.5e-10   40.3  16.0    30   174   273   421   270   453 0.78 Major Facilitator Superfamily
Sugar_tr             PF00083.19   451 sp|Q5HRH0|PROP_STAEQ -            464   7.8e-34  117.0  38.0   1   2   4.1e-33   1.2e-29  103.2   6.4     7   204    16   219     9   224 0.92 Sugar (and other) transporter
Sugar_tr             PF00083.19   451 sp|Q5HRH0|PROP_STAEQ -            464   7.8e-34  117.0  38.0   2   2   1.4e-08     4e-05   22.3  21.7   244   433   230   416   213   430 0.74 Sugar (and other) transporter
MFS_2                PF13347.1    428 sp|Q5HRH0|PROP_STAEQ -            464   0.00047   18.6  11.6   2   3   1.6e-07   0.00047   18.6  11.6   137   333   145   349   129   365 0.57 MFS/sugar transport protein
LacY_symp            PF01306.14   413 sp|Q5HRH0|PROP_STAEQ -            464   0.00075   18.1  10.8   2   2   2.5e-07   0.00075   18.1  10.8    15   115   245   346   232   425 0.82 LacY proton/sugar symporter
OATP                 PF03137.15   539 sp|Q5HRH0|PROP_STAEQ -            464       1.6    6.6  10.5   1   2   0.00018      0.52    8.2   5.6   297   362   232   296   204   329 0.81 Organic Anion Transporter Polypeptide (OATP) family
Rotamase_3           PF13616.1    117 sp|Q5HN96|PRSA_STAEQ -            325   1.3e-27   96.3   9.0   1   1   4.3e-31   1.3e-27   96.3   9.0     4   115   130   245   127   247 0.94 PPIC-type PPIASE domain
Rotamase             PF00639.16    95 sp|Q5HN96|PRSA_STAEQ -            325   1.4e-27   96.2   3.5   2   2   4.6e-31   1.4e-27   96.2   3.5     1    94   146   244   146   245 0.96 PPIC-type PPIASE domain
Rotamase_2           PF13145.1    121 sp|Q5HN96|PRSA_STAEQ -            325   1.3e-09   38.7   5.2   2   3   4.3e-13   1.3e-09   38.7   5.2    19   108   139   246   129   254 0.66 PPIC-type PPIASE domain
FF                   PF01846.14    51 sp|Q5HN96|PRSA_STAEQ -            325      0.02   14.8   0.7   2   2   5.8e-05      0.17   11.8   0.1     4    20   274   290   272   299 0.85 FF domain
ABC_tran             PF00005.22   137 sp|Q5HPF5|PSTB_STAEQ -            291   1.8e-32  112.4   0.1   1   1   1.5e-34   7.6e-32  110.4   0.0     1   137    60   216    60   216 0.95 ABC transporter
AAA_21               PF13304.1    303 sp|Q5HPF5|PSTB_STAEQ -            291   7.7e-14   52.3   0.0   1   1   1.1e-12   5.8e-10   39.6   0.0     1   298    72   245    72   247 0.63 AAA domain
SMC_N                PF02463.14   220 sp|Q5HPF5|PSTB_STAEQ -            291   2.5e-10   39.9   1.0   1   1   9.6e-13   4.9e-10   39.0   0.0    22   205    68   252    57   263 0.77 RecF/RecN/SMC N terminal domain
AAA_29               PF13555.1     62 sp|Q5HPF5|PSTB_STAEQ -            291   6.3e-05   22.4   0.0   1   1   2.6e-07   0.00013   21.3   0.0    17    45    63    92    53   103 0.73 P-loop containing region of AAA domain
AAA_23               PF13476.1    202 sp|Q5HPF5|PSTB_STAEQ -            291   7.5e-05   23.1   1.5   1   1   1.6e-07   8.3e-05   23.0   0.5    11    40    61    91    45   283 0.86 AAA domain
DUF258               PF03193.11   161 sp|Q5HPF5|PSTB_STAEQ -            291   0.00013   21.1   0.0   1   1   5.5e-07   0.00028   20.1   0.0    24    58    58    93    39   126 0.80 Protein of unknown function, DUF258
AAA_17               PF13207.1    121 sp|Q5HPF5|PSTB_STAEQ -            291   0.00029   21.6   0.3   1   1   3.9e-06     0.002   18.9   0.1     3    23    74    94    72   188 0.74 AAA domain
Rad17                PF03215.10   519 sp|Q5HPF5|PSTB_STAEQ -            291   0.00055   18.7   0.0   1   1   1.8e-06   0.00092   18.0   0.0    36    73    64   100    57   126 0.80 Rad17 cell cycle checkpoint protein
AAA_22               PF13401.1    131 sp|Q5HPF5|PSTB_STAEQ -            291    0.0015   18.6   0.1   1   1   9.5e-06    0.0049   17.0   0.1     4    37    70   110    65   260 0.73 AAA domain
AAA_18               PF13238.1    129 sp|Q5HPF5|PSTB_STAEQ -            291    0.0021   18.3   0.1   1   1   2.8e-05     0.014   15.6   0.0     2    43    74   114    74   172 0.69 AAA domain
Adeno_IVa2           PF02456.10   370 sp|Q5HPF5|PSTB_STAEQ -            291    0.0046   15.6   0.1   1   1   2.9e-05     0.015   13.9   0.1    58   119    40   102     6   113 0.75 Adenovirus IVa2 protein
AAA_19               PF13245.1     76 sp|Q5HPF5|PSTB_STAEQ -            291    0.0057   16.3   0.0   1   2   0.00037      0.19   11.5   0.0     6    35    67    94    62   113 0.81 Part of AAA domain
AAA_16               PF13191.1    185 sp|Q5HPF5|PSTB_STAEQ -            291    0.0067   16.4   0.0   1   1   3.3e-05     0.017   15.1   0.0    21    46    67    92    57   261 0.87 AAA ATPase domain
PhoH                 PF02562.11   205 sp|Q5HPF5|PSTB_STAEQ -            291    0.0077   15.4   0.0   1   1     3e-05     0.015   14.5   0.0    16    91    67   149    55   176 0.76 PhoH-like protein
RNA_helicase         PF00910.17   107 sp|Q5HPF5|PSTB_STAEQ -            291    0.0084   16.2   0.1   1   1   8.3e-05     0.042   14.0   0.0     3    32    75   104    73   123 0.75 RNA helicase
AAA_14               PF13173.1    128 sp|Q5HPF5|PSTB_STAEQ -            291    0.0084   16.0   0.2   1   1   8.9e-05     0.045   13.6   0.1     2    41    70   122    69   183 0.58 AAA domain
AAA_15               PF13175.1    415 sp|Q5HPF5|PSTB_STAEQ -            291    0.0092   15.0   6.6   1   2     6e-05     0.031   13.3   2.2    17    86    62   124    25   169 0.54 AAA ATPase domain
AAA_10               PF12846.2    304 sp|Q5HPF5|PSTB_STAEQ -            291     0.011   15.2   0.1   1   1   0.00012      0.06   12.7   0.1     1    22    70    91    70   123 0.86 AAA-like domain
AAA_28               PF13521.1    163 sp|Q5HPF5|PSTB_STAEQ -            291     0.013   15.5   0.0   1   1   5.4e-05     0.028   14.3   0.0     3    35    74   108    72   132 0.76 AAA domain
Arch_ATPase          PF01637.13   234 sp|Q5HPF5|PSTB_STAEQ -            291     0.013   15.1   0.2   1   1   6.6e-05     0.034   13.8   0.0    17   126    69   176    57   188 0.51 Archaeal ATPase
AAA                  PF00004.24   132 sp|Q5HPF5|PSTB_STAEQ -            291     0.017   15.3   0.9   1   1   0.00046      0.24   11.6   0.0     3    29    75   102    73   141 0.76 ATPase family associated with various cellular activities (AAA)
PRK                  PF00485.13   194 sp|Q5HPF5|PSTB_STAEQ -            291     0.029   13.9   0.0   1   1   0.00017     0.086   12.3   0.0     2    53    73   123    72   138 0.61 Phosphoribulokinase / Uridine kinase family
AAA_33               PF13671.1    143 sp|Q5HPF5|PSTB_STAEQ -            291     0.034   14.0   0.0   1   1   0.00017     0.087   12.6   0.0     1    19    72    90    72   146 0.82 AAA domain
AAA_25               PF13481.1    194 sp|Q5HPF5|PSTB_STAEQ -            291     0.039   13.3   0.0   1   1   0.00013     0.065   12.6   0.0    31    55    68    92    56   153 0.85 AAA domain
Viral_helicase1      PF01443.13   234 sp|Q5HPF5|PSTB_STAEQ -            291     0.052   13.0   0.1   1   1    0.0002       0.1   12.0   0.0     5    39    77   112    73   149 0.70 Viral (Superfamily 1) RNA helicase
AAA_30               PF13604.1    196 sp|Q5HPF5|PSTB_STAEQ -            291     0.069   12.7   0.0   1   1   0.00072      0.37   10.3   0.0    18    43    70    95    61   106 0.86 AAA domain
ATP_bind_1           PF03029.12   238 sp|Q5HPF5|PSTB_STAEQ -            291      0.08   12.4   0.3   1   1   0.00039       0.2   11.1   0.1     1    22    75    96    75   106 0.88 Conserved hypothetical ATP binding protein
PBP_like_2           PF12849.2    281 sp|Q5HPF2|PSTS_STAEQ -            325   3.2e-42  144.9   2.7   1   1     2e-45   9.6e-42  143.3   2.7    10   281    36   280    24   280 0.89 PBP superfamily domain
PBP_like             PF12727.2    193 sp|Q5HPF2|PSTS_STAEQ -            325   7.9e-16   57.5   0.0   1   1   2.1e-19   1.1e-15   57.1   0.0     2   191    55   275    54   277 0.76 PBP superfamily domain
Colicin-DNase        PF12639.2    110 sp|Q5HPF2|PSTS_STAEQ -            325    0.0018   18.4   1.2   1   2   3.7e-07    0.0018   18.4   1.2    13    78    75   147    58   162 0.80 DNase/tRNase domain of colicin-like bacteriocin
PEP-utilizers_C      PF02896.13   294 sp|Q5HQ85|PT1_STAEQ  -            572  1.1e-126  421.6   0.0   2   2  5.3e-130  2.6e-126  420.4   0.0     2   290   253   540   252   544 0.99 PEP-utilising enzyme, TIM barrel domain
PEP-utilisers_N      PF05524.8    123 sp|Q5HQ85|PT1_STAEQ  -            572   3.4e-34  117.2   0.4   1   1   2.3e-37   1.1e-33  115.5   0.4     1   123     5   129     5   129 0.96 PEP-utilising enzyme, N-terminal
PEP-utilizers        PF00391.18    81 sp|Q5HQ85|PT1_STAEQ  -            572     1e-24   85.8   0.7   1   2   1.3e-26   6.6e-23   80.0   0.2    10    81   155   227   149   227 0.95 PEP-utilising enzyme, mobile domain
PTA_PTB              PF01515.14   319 sp|Q5HRF7|PTAS_STAEQ -            329  2.9e-117  391.2   0.8   1   1  4.5e-121  3.3e-117  391.0   0.8     5   319     7   324     3   324 0.97 Phosphate acetyl/butaryl transferase
PSP1                 PF04468.7     88 sp|Q5HRF7|PTAS_STAEQ -            329     0.083   12.8   0.0   1   1   2.3e-05      0.17   11.8   0.0    23    54   216   247   204   250 0.87 PSP1 C-terminal conserved region
Pept_tRNA_hydro      PF01195.14   184 sp|Q5HRQ3|PTH_STAEQ  -            190   9.8e-68  227.2   0.3   1   1   7.4e-72   1.1e-67  227.1   0.3     1   184     3   186     3   186 0.98 Peptidyl-tRNA hydrolase
LMWPc                PF01451.16   138 sp|Q5HN53|PTPA_STAEQ -            154   2.4e-31  108.9   0.0   1   1   1.8e-35   2.7e-31  108.7   0.0     1   137     4   141     4   142 0.93 Low molecular weight phosphotyrosine protein phosphatase
LMWPc                PF01451.16   138 sp|Q5HMA8|PTPB_STAEQ -            139     3e-22   79.4   0.0   1   1   2.3e-26   3.4e-22   79.2   0.0     1   136     3   133     3   135 0.95 Low molecular weight phosphotyrosine protein phosphatase
GATase_2             PF00310.16   361 sp|Q5HQA0|PUR1_STAEQ -            494   5.4e-21   74.7   0.2   1   2   4.4e-06    0.0093   14.7   0.0     1    51    11    50    11    61 0.89 Glutamine amidotransferases class-II
GATase_2             PF00310.16   361 sp|Q5HQA0|PUR1_STAEQ -            494   5.4e-21   74.7   0.2   2   2   4.1e-18   8.7e-15   54.2   0.1   189   361    68   206    52   206 0.91 Glutamine amidotransferases class-II
GATase_7             PF13537.1    125 sp|Q5HQA0|PUR1_STAEQ -            494   2.2e-20   72.6   0.0   1   1   1.9e-23   4.1e-20   71.7   0.0     3   123    83   209    81   211 0.91 Glutamine amidotransferase domain
GATase_6             PF13522.1    133 sp|Q5HQA0|PUR1_STAEQ -            494   9.5e-20   70.9   0.0   1   1   1.3e-22   2.7e-19   69.4   0.0    14   133    77   205    55   205 0.84 Glutamine amidotransferase domain
Pribosyltran         PF00156.22   125 sp|Q5HQA0|PUR1_STAEQ -            494   2.4e-16   59.6   0.8   2   2   4.4e-19   9.4e-16   57.6   0.7    11   123   271   384   259   386 0.87 Phosphoribosyl transferase domain
GATase_4             PF13230.1    272 sp|Q5HQA0|PUR1_STAEQ -            494   1.7e-06   26.9   0.0   1   1   1.3e-09   2.9e-06   26.1   0.0    73   126    77   129    58   166 0.75 Glutamine amidotransferases class-II
Pribosyl_synth       PF14572.1    184 sp|Q5HQA0|PUR1_STAEQ -            494     0.036   13.7   0.2   1   1     4e-05     0.084   12.6   0.2    75   151   340   417   311   433 0.83 Phosphoribosyl synthetase-associated domain
PRTase_2             PF15609.1    191 sp|Q5HQA0|PUR1_STAEQ -            494     0.056   12.7   0.1   1   1   5.2e-05      0.11   11.7   0.1   120   156   348   385   333   387 0.79 Phosphoribosyl transferase
GARS_A               PF01071.14   194 sp|Q5HQ96|PUR2_STAEQ -            413   7.3e-67  224.7   0.1   1   1   1.4e-69   1.9e-66  223.3   0.0     1   194   102   290   102   290 0.97 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain
GARS_N               PF02844.10   100 sp|Q5HQ96|PUR2_STAEQ -            413   1.2e-35  121.9   0.2   1   1   2.2e-38     3e-35  120.6   0.2     1   100     1   101     1   101 0.98 Phosphoribosylglycinamide synthetase, N domain
GARS_C               PF02843.11    93 sp|Q5HQ96|PUR2_STAEQ -            413   3.6e-24   84.7   0.1   1   1   7.3e-27   9.8e-24   83.3   0.1     1    92   322   410   322   411 0.96 Phosphoribosylglycinamide synthetase, C domain
ATP-grasp_4          PF13535.1    184 sp|Q5HQ96|PUR2_STAEQ -            413   1.5e-15   57.3   0.0   1   1     2e-18   2.7e-15   56.5   0.0     5   180   104   286   102   287 0.83 ATP-grasp domain
ATP-grasp_3          PF02655.9    161 sp|Q5HQ96|PUR2_STAEQ -            413   1.4e-06   28.2   0.0   1   1   1.7e-09   2.2e-06   27.6   0.0     7   159   106   286   102   288 0.77 ATP-grasp domain
ATP-grasp            PF02222.17   172 sp|Q5HQ96|PUR2_STAEQ -            413   9.7e-06   25.0   0.0   1   1   1.6e-08   2.1e-05   23.9   0.0     2    82   112   193   110   213 0.86 ATP-grasp domain
CPSase_L_D2          PF02786.12   211 sp|Q5HQ96|PUR2_STAEQ -            413   0.00013   21.3   0.0   1   1   4.1e-07   0.00055   19.2   0.0     4    90   106   185   103   191 0.90 Carbamoyl-phosphate synthase L chain, ATP binding domain
RimK                 PF08443.6    190 sp|Q5HQ96|PUR2_STAEQ -            413   0.00085   18.8   0.1   1   1     3e-06     0.004   16.6   0.0     3    99   103   198   101   305 0.74 RimK-like ATP-grasp domain
GSH-S_ATP            PF02955.11   174 sp|Q5HQ96|PUR2_STAEQ -            413     0.021   13.9   0.0   1   1   0.00011      0.14   11.2   0.0    16   156   123   272   103   274 0.69 Prokaryotic glutathione synthetase, ATP-grasp domain
ATP-grasp_5          PF13549.1    222 sp|Q5HQ96|PUR2_STAEQ -            413     0.039   13.1   0.0   1   1   5.7e-05     0.077   12.1   0.0    15    52   107   144   103   148 0.95 ATP-grasp domain
ATP-grasp_2          PF08442.5    202 sp|Q5HQ96|PUR2_STAEQ -            413     0.043   13.1   0.0   1   1   7.8e-05       0.1   11.9   0.0     7    69   107   177   104   196 0.82 ATP-grasp domain
Formyl_trans_N       PF00551.14   181 sp|Q5HQ98|PUR3_STAEQ -            188   3.4e-55  186.3   0.0   1   1   2.6e-59   3.9e-55  186.2   0.0     2   181     3   183     2   183 0.99 Formyl transferase
AIRS_C               PF02769.17   153 sp|Q5HQ99|PUR5_STAEQ -            343   2.2e-28   99.1   0.0   1   1   5.7e-32   4.2e-28   98.2   0.0     1   147   173   334   173   339 0.95 AIR synthase related protein, C-terminal domain
AIRS                 PF00586.19    96 sp|Q5HQ99|PUR5_STAEQ -            343   2.2e-19   69.4   0.2   1   1   6.4e-23   4.7e-19   68.4   0.2     4    96    42   139    39   139 0.90 AIR synthase related protein, N-terminal domain
SAICAR_synt          PF01259.13   249 sp|Q5HQA4|PUR7_STAEQ -            234     2e-66  223.6   3.4   1   1   2.9e-70   2.2e-66  223.5   3.4     3   246     2   231     1   234 0.97 SAICAR synthetase
IMP_cyclohyd         PF07826.6    200 sp|Q5HQA4|PUR7_STAEQ -            234     0.013   14.8   0.2   2   2     4e-06      0.03   13.6   0.0    68   161    88   175    78   224 0.84 IMP cyclohydrolase-like protein
Lyase_1              PF00206.15   312 sp|Q5HN26|PUR8_STAEQ -            431   7.7e-75  251.9   0.2   1   1   3.3e-78   9.9e-75  251.6   0.2     4   312     6   286     3   286 0.95 Lyase
ADSL_C               PF10397.4     81 sp|Q5HN26|PUR8_STAEQ -            431   7.8e-30  102.7   0.0   1   1   8.8e-33   2.6e-29  101.0   0.0     2    80   350   428   349   429 0.98 Adenylosuccinate lyase C-terminus
BLYB                 PF05289.6    105 sp|Q5HN26|PUR8_STAEQ -            431     0.018   14.8   0.1   2   2   0.00028      0.84    9.4   0.1     7    45   319   357   316   409 0.79 Borrelia hemolysin accessory protein
DUF3152              PF11350.3    204 sp|Q5HN26|PUR8_STAEQ -            431     0.023   14.1   0.2   1   1   1.4e-05     0.043   13.3   0.2    31    80    51   100    38   110 0.79 Protein of unknown function (DUF3152)
AICARFT_IMPCHas      PF01808.13   315 sp|Q5HQ97|PUR9_STAEQ -            492  4.4e-102  341.3  10.5   1   1    5e-105  1.8e-101  339.3  10.5     1   314   133   426   133   427 0.97 AICARFT/IMPCHase bienzyme
MGS                  PF02142.17    95 sp|Q5HQ97|PUR9_STAEQ -            492   7.6e-30  102.7   1.8   1   3   2.2e-32     8e-29   99.4   0.1     1    95    13   128    13   128 0.99 MGS-like domain
Phosphonate-bd       PF12974.2    243 sp|Q5HQ97|PUR9_STAEQ -            492    0.0076   15.6   0.2   1   2   1.9e-05     0.071   12.4   0.1    32   111   142   231   129   240 0.78 ABC transporter, phosphonate, periplasmic substrate-binding protein
Adenylsucc_synt      PF00709.16   421 sp|Q5HK16|PURA_STAEQ -            427  2.3e-176  586.5   0.0   1   1  1.8e-180  2.6e-176  586.3   0.0     2   419     4   420     3   422 0.99 Adenylosuccinate synthetase
ATP-grasp            PF02222.17   172 sp|Q5HQA5|PURK_STAEQ -            375     1e-43  148.7   0.2   1   1     2e-46   1.5e-43  148.1   0.2     3   172   117   283   115   283 0.95 ATP-grasp domain
ATP-grasp_4          PF13535.1    184 sp|Q5HQA5|PURK_STAEQ -            375   1.2e-16   60.9   0.1   1   1   2.3e-19   1.7e-16   60.4   0.1     3   179   106   272   104   278 0.86 ATP-grasp domain
CPSase_L_D2          PF02786.12   211 sp|Q5HQA5|PURK_STAEQ -            375   2.5e-13   49.7   0.1   1   1   5.4e-16     4e-13   49.1   0.1     1   180   107   272   107   302 0.85 Carbamoyl-phosphate synthase L chain, ATP binding domain
ATPgrasp_Ter         PF15632.1    330 sp|Q5HQA5|PURK_STAEQ -            375     2e-07   30.0   0.1   1   2     2e-06    0.0015   17.3   0.0    92   192    91   190    78   197 0.86 ATP-grasp in the biosynthetic pathway with Ter operon
ATPgrasp_Ter         PF15632.1    330 sp|Q5HQA5|PURK_STAEQ -            375     2e-07   30.0   0.1   2   2   0.00028      0.21   10.3   0.0   239   290   230   281   223   303 0.91 ATP-grasp in the biosynthetic pathway with Ter operon
ATP-grasp_3          PF02655.9    161 sp|Q5HQA5|PURK_STAEQ -            375   3.4e-07   30.2   0.2   1   1   7.3e-10   5.4e-07   29.6   0.2    25   159   136   273   105   275 0.80 ATP-grasp domain
2-Hacid_dh_C         PF02826.14   178 sp|Q5HQA5|PURK_STAEQ -            375   1.1e-06   27.9   0.0   1   1   2.8e-09   2.1e-06   27.0   0.0    36    97     9    76     3    96 0.80 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain
Dala_Dala_lig_C      PF07478.8    203 sp|Q5HQA5|PURK_STAEQ -            375   1.2e-06   28.0   0.5   1   1   1.8e-08   1.4e-05   24.6   0.5    19   175   127   272   109   276 0.72 D-ala D-ala ligase C-terminus
TrkA_N               PF02254.13   116 sp|Q5HQA5|PURK_STAEQ -            375   2.7e-05   24.1   0.1   1   2   4.7e-07   0.00035   20.5   0.0     2    59    13    68    12    75 0.85 TrkA-N domain
NAD_binding_2        PF03446.10   163 sp|Q5HQA5|PURK_STAEQ -            375   3.8e-05   23.5   0.0   1   1   1.2e-07   8.8e-05   22.3   0.0     2    59    10    72     9    83 0.80 NAD binding domain of 6-phosphogluconate dehydrogenase
Pyr_redox            PF00070.22    80 sp|Q5HQA5|PURK_STAEQ -            375   0.00013   22.3   0.0   1   2   8.4e-05     0.062   13.7   0.0     2    33    12    43    11    64 0.86 Pyridine nucleotide-disulphide oxidoreductase
XdhC_C               PF13478.1    136 sp|Q5HQA5|PURK_STAEQ -            375   0.00022   21.5   0.0   1   1   1.7e-06    0.0013   19.0   0.0     3    62    14    75    12   148 0.68 XdhC Rossmann domain
3HCDH_N              PF02737.13   180 sp|Q5HQA5|PURK_STAEQ -            375   0.00031   20.4   0.0   1   1   9.6e-07   0.00071   19.2   0.0     1    50    11    62    11   132 0.63 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain
F420_oxidored        PF03807.12    96 sp|Q5HQA5|PURK_STAEQ -            375    0.0028   18.0   0.0   1   1   1.3e-05    0.0093   16.3   0.0     1    37    11    43    11    74 0.89 NADP oxidoreductase coenzyme F420-dependent
RNase_H_2            PF13482.1    164 sp|Q5HQA5|PURK_STAEQ -            375    0.0045   16.8   0.1   1   1   1.5e-05     0.011   15.5   0.1    34   100    51   115    34   143 0.81 RNase_H superfamily
DAO                  PF01266.19   358 sp|Q5HQA5|PURK_STAEQ -            375     0.019   13.8   0.0   1   1   3.8e-05     0.028   13.3   0.0     3    91    13   109    11   137 0.81 FAD dependent oxidoreductase
HI0933_like          PF03486.9    409 sp|Q5HQA5|PURK_STAEQ -            375      0.03   12.7   0.3   1   1   6.2e-05     0.046   12.1   0.2     4    33    13    42    10    98 0.92 HI0933-like protein
DUF1297              PF06973.7    188 sp|Q5HQA5|PURK_STAEQ -            375     0.032   13.5   0.0   1   1   0.00012     0.092   12.0   0.0   116   170   246   300   231   313 0.81 Domain of unknown function (DUF1297)
NAD_binding_7        PF13241.1    103 sp|Q5HQA5|PURK_STAEQ -            375     0.077   13.2   0.0   1   1   0.00034      0.25   11.6   0.0     8    45    10    52     7   139 0.74 Putative NAD(P)-binding
AIRS                 PF00586.19    96 sp|Q5HQA1|PURL_STAEQ -            729   4.8e-39  132.5   1.0   1   2   3.5e-25   2.6e-21   75.6   0.2     2    95    80   173    79   174 0.90 AIR synthase related protein, N-terminal domain
AIRS                 PF00586.19    96 sp|Q5HQA1|PURL_STAEQ -            729   4.8e-39  132.5   1.0   2   2   1.1e-18   8.1e-15   54.8   0.0     3    96   440   534   438   534 0.89 AIR synthase related protein, N-terminal domain
AIRS_C               PF02769.17   153 sp|Q5HQA1|PURL_STAEQ -            729   5.8e-39  133.5   2.8   1   2   1.4e-32   1.1e-28  100.2   0.1     2   151   207   360   206   362 0.96 AIR synthase related protein, C-terminal domain
AIRS_C               PF02769.17   153 sp|Q5HQA1|PURL_STAEQ -            729   5.8e-39  133.5   2.8   2   2   5.4e-12     4e-08   33.4   0.3     1   145   569   694   569   699 0.83 AIR synthase related protein, C-terminal domain
SSF                  PF00474.12   406 sp|Q5HN32|PUTP_STAEQ -            511   1.2e-98  330.4  24.8   2   2  8.2e-103   1.2e-98  330.4  24.8     1   406    47   447    47   447 0.96 Sodium:solute symporter family
OTCace_N             PF02729.16   142 sp|Q5HPZ1|PYRB_STAEQ -            293   3.9e-40  136.8   0.0   1   2   3.3e-43   1.7e-39  134.7   0.0     2   142     3   141     2   141 0.97 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain
OTCace               PF00185.19   158 sp|Q5HPZ1|PYRB_STAEQ -            293     3e-35  121.4   0.0   1   1   1.2e-38   6.2e-35  120.4   0.0     1   158   146   291   146   291 0.89 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain
2-Hacid_dh_C         PF02826.14   178 sp|Q5HPZ1|PYRB_STAEQ -            293     0.081   12.0   0.0   1   1   2.9e-05      0.14   11.2   0.0    47   116   161   226   146   249 0.84 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain
Amidohydro_1         PF01979.15   333 sp|Q5HPZ0|PYRC_STAEQ -            425   5.5e-41  141.3   0.7   1   1   2.6e-44   6.5e-41  141.0   0.7     2   333    51   380    50   380 0.96 Amidohydrolase family
Amidohydro_4         PF13147.1    304 sp|Q5HPZ0|PYRC_STAEQ -            425   5.1e-33  115.2   0.3   1   1   2.4e-36     6e-33  115.0   0.3     1   300    45   373    45   377 0.85 Amidohydrolase
DHOase               PF12890.2    142 sp|Q5HPZ0|PYRC_STAEQ -            425   1.7e-31  108.7   0.0   1   1     1e-34   2.5e-31  108.2   0.0     2   142    49   237    48   237 0.97 Dihydro-orotase-like
Amidohydro_5         PF13594.1     68 sp|Q5HPZ0|PYRC_STAEQ -            425   6.2e-16   57.9   2.5   1   1   2.6e-19   6.5e-16   57.9   0.3     1    68    20    88    20    88 0.78 Amidohydrolase
Amidohydro_3         PF07969.6    404 sp|Q5HPZ0|PYRC_STAEQ -            425    0.0033   16.7   2.4   1   3   0.00035      0.87    8.7   0.8     2    15    51    64    50    89 0.83 Amidohydrolase family
TatD_DNase           PF01026.16   255 sp|Q5HPZ0|PYRC_STAEQ -            425     0.035   13.3   0.2   1   1   0.00035      0.86    8.7   0.2     1   134    56   189    56   286 0.60 TatD related DNase
Pribosyltran         PF00156.22   125 sp|Q5HPY6|PYRE_STAEQ -            203   1.2e-17   63.7   0.3   1   1   6.3e-21   2.3e-17   62.8   0.3     6   124    43   149    38   150 0.90 Phosphoribosyl transferase domain
UPRTase              PF14681.1    207 sp|Q5HPY6|PYRE_STAEQ -            203    0.0011   18.2   0.1   1   1   4.7e-07    0.0017   17.5   0.1   118   177   109   165    74   174 0.74 Uracil phosphoribosyltransferase
Aconitase_2_N        PF06434.8    204 sp|Q5HPY6|PYRE_STAEQ -            203     0.046   13.1   0.0   1   1   1.7e-05     0.063   12.6   0.0    36    75    96   135    77   170 0.87 Aconitate hydratase 2 N-terminus
PRTase_2             PF15609.1    191 sp|Q5HPY6|PYRE_STAEQ -            203     0.052   12.8   0.0   1   1   2.1e-05     0.077   12.2   0.0   107   149   103   141    40   171 0.81 Phosphoribosyl transferase
OMPdecase            PF00215.19   226 sp|Q5HPY7|PYRF_STAEQ -            230   7.2e-49  166.2   0.1   1   1   1.7e-52   8.2e-49  166.0   0.1     4   225     6   223     3   224 0.94 Orotidine 5'-phosphate decarboxylase / HUMPS family
DeoC                 PF01791.4    236 sp|Q5HPY7|PYRF_STAEQ -            230    0.0074   15.6   0.2   2   2     3e-05      0.15   11.3   0.0   150   184   159   194   123   207 0.76 DeoC/LacD family aldolase
EAP30                PF04157.11   223 sp|Q5HPY7|PYRF_STAEQ -            230     0.077   12.1   0.1   1   1   2.5e-05      0.13   11.4   0.1   136   214    66   142    64   150 0.86 EAP30/Vps36 family
CTP_synth_N          PF06418.9    276 sp|Q5HM95|PYRG_STAEQ -            535  7.2e-133  441.8   0.2   1   1  3.1e-136  9.2e-133  441.5   0.2     1   276     2   278     2   278 0.98 CTP synthase N-terminus
GATase               PF00117.23   192 sp|Q5HM95|PYRG_STAEQ -            535   1.6e-53  181.0   0.0   1   1   8.9e-57   2.6e-53  180.3   0.0     2   191   303   527   302   528 0.93 Glutamine amidotransferase class-I
Peptidase_C26        PF07722.8    217 sp|Q5HM95|PYRG_STAEQ -            535   2.6e-13   49.9   0.0   1   1   1.8e-14   5.2e-11   42.3   0.0    48   217   336   510   325   510 0.81 Peptidase C26
CbiA                 PF01656.18   195 sp|Q5HM95|PYRG_STAEQ -            535   2.5e-05   23.7   0.2   1   1   1.6e-08   4.7e-05   22.8   0.2     8   110    13   161     6   305 0.70 CobQ/CobB/MinD/ParA nucleotide binding domain
GATase_3             PF07685.9    158 sp|Q5HM95|PYRG_STAEQ -            535     0.093   12.3   0.0   1   1   7.6e-05      0.23   11.0   0.0     4    57   343   390   340   424 0.82 CobB/CobQ-like glutamine amidotransferase domain
AA_kinase            PF00696.23   242 sp|Q5HPT3|PYRH_STAEQ -            240   2.9e-25   89.2   3.0   1   1   4.1e-29   6.1e-25   88.1   3.0     1   241     8   217     8   218 0.88 Amino acid kinase family
Pribosyltran         PF00156.22   125 sp|Q5HPZ3|PYRR_STAEQ -            175   4.5e-13   49.0   2.3   1   1   9.3e-17   6.9e-13   48.4   2.3     3   125     5   133     3   133 0.85 Phosphoribosyl transferase domain
PRTase_2             PF15609.1    191 sp|Q5HPZ3|PYRR_STAEQ -            175    0.0067   15.7   0.1   1   1   1.2e-06    0.0086   15.3   0.1   111   164    80   138    10   162 0.84 Phosphoribosyl transferase
COX1                 PF00115.15   447 sp|Q5HQB0|QOX1_STAEQ -            662    2e-157  524.4  66.6   1   2  1.3e-161    2e-157  524.4  66.6     1   447    53   501    53   501 0.99 Cytochrome C and Quinol oxidase polypeptide I
COX2_TM              PF02790.10    84 sp|Q5HQA9|QOX2_STAEQ -            374   1.8e-08   34.2   4.1   1   1   2.2e-11   3.7e-08   33.2   4.1    11    81    27   101    18   104 0.80 Cytochrome C oxidase subunit II, transmembrane domain
COX2                 PF00116.15   120 sp|Q5HQA9|QOX2_STAEQ -            374   5.9e-06   26.1   0.0   1   1   9.3e-09   1.5e-05   24.7   0.0    42   113   139   210   119   217 0.91 Cytochrome C oxidase subunit II, periplasmic domain
COX_ARM              PF06481.9     47 sp|Q5HQA9|QOX2_STAEQ -            374   0.00012   21.6   0.1   1   1   2.2e-07   0.00037   20.1   0.1     3    44   231   272   229   275 0.92 COX Aromatic Rich Motif
DUF3112              PF11309.3    160 sp|Q5HQA9|QOX2_STAEQ -            374    0.0007   19.4   2.4   1   1   7.9e-07    0.0013   18.5   2.4    13    79    38   103    32   147 0.83 Protein of unknown function (DUF3112)
LPAM_1               PF08139.7     25 sp|Q5HQA9|QOX2_STAEQ -            374    0.0031   17.6   4.0   1   1   1.9e-06    0.0031   17.6   4.0     1    25     1    22     1    22 0.94 Prokaryotic membrane lipoprotein lipid attachment site
Tetraspannin         PF00335.15   221 sp|Q5HQA9|QOX2_STAEQ -            374     0.025   13.8   0.9   1   1   3.1e-05     0.051   12.8   0.9    68   110    29    74     2   126 0.64 Tetraspanin family
Lig_chan             PF00060.21   148 sp|Q5HQA9|QOX2_STAEQ -            374      0.17   11.6   1.7   1   1   0.00025      0.42   10.3   1.7     7    57    43    93    39   104 0.80 Ligand-gated ion channel
CcoS                 PF03597.10    45 sp|Q5HQA9|QOX2_STAEQ -            374       7.9    6.0   8.9   1   1   0.00013      0.21   11.0   1.9     1    27    43    69    43    70 0.93 Cytochrome oxidase maturation protein cbb3-type
COX3                 PF00510.13   258 sp|Q5HQB1|QOX3_STAEQ -            201     5e-16   58.9  24.4   1   1   8.3e-20   1.2e-15   57.6  24.4    77   257    19   196    12   197 0.87 Cytochrome c oxidase subunit III
COX4_pro             PF03626.9     75 sp|Q5HQB2|QOX4_STAEQ -             96   4.8e-13   49.0  14.5   1   1   3.3e-16   5.4e-13   48.8  14.5     2    74     8    88     7    89 0.94 Prokaryotic Cytochrome C oxidase subunit IV
MtN3_slv             PF03083.11    87 sp|Q5HQB2|QOX4_STAEQ -             96    0.0078   16.0   1.8   1   1   4.8e-06    0.0078   16.0   1.8    34    86     9    61     3    62 0.92 Sugar efflux transporter for intercellular exchange
Herpes_BMRF2         PF04633.7    349 sp|Q5HQB2|QOX4_STAEQ -             96     0.014   14.4   7.2   1   1     9e-06     0.015   14.3   7.2     8    91     4    85     1    93 0.77 Herpesvirus BMRF2 protein
YfhO                 PF09586.5    843 sp|Q5HQB2|QOX4_STAEQ -             96      0.14   10.1   6.7   1   1   9.8e-05      0.16    9.9   6.7   365   446     8    89     2    95 0.65 Bacterial membrane protein YfhO
Claudin_2            PF13903.1    172 sp|Q5HQB2|QOX4_STAEQ -             96      0.92    9.1   9.3   1   2   0.00037       0.6    9.7   4.1    72   119     8    55     1    62 0.88 PMP-22/EMP/MP20/Claudin tight junction
Queuosine_synth      PF02547.10   341 sp|Q5HNR1|QUEA_STAEQ -            341  3.2e-142  473.2   0.0   1   1  4.8e-146  3.5e-142  473.1   0.0     2   341     3   341     2   341 0.98 Queuosine biosynthesis protein
AXH                  PF08517.7    115 sp|Q5HNR1|QUEA_STAEQ -            341     0.059   13.5   0.0   1   1   1.8e-05      0.13   12.4   0.0    30    86   224   278   197   284 0.72 Ataxin-1 and HBP1 module (AXH)
QueC                 PF06508.8    210 sp|Q5HR20|QUEC_STAEQ -            223   1.6e-85  285.6   0.0   1   1   1.1e-88   1.8e-85  285.4   0.0     1   209    10   216    10   217 0.98 Queuosine biosynthesis protein QueC
Asn_synthase         PF00733.16   255 sp|Q5HR20|QUEC_STAEQ -            223     1e-05   25.1   0.0   1   1   6.9e-09   1.1e-05   25.0   0.0    17    80     8    70     2   145 0.90 Asparagine synthase
ATP_bind_3           PF01171.15   182 sp|Q5HR20|QUEC_STAEQ -            223   2.3e-05   23.9   0.1   1   1   2.2e-08   3.6e-05   23.3   0.1     2    68    11    71    10    86 0.85 PP-loop family
ThiI                 PF02568.9    197 sp|Q5HR20|QUEC_STAEQ -            223   5.8e-05   22.6   0.0   1   1   1.3e-07   0.00021   20.7   0.0     3   172     8   191     6   193 0.71 Thiamine biosynthesis protein (ThiI)
NAD_synthase         PF02540.12   242 sp|Q5HR20|QUEC_STAEQ -            223    0.0012   17.8   0.0   1   2   3.7e-06    0.0062   15.4   0.0    18    95     8    83     2   115 0.79 NAD synthase
PAPS_reduct          PF01507.14   174 sp|Q5HR20|QUEC_STAEQ -            223    0.0027   17.5   0.0   1   1     3e-06     0.005   16.6   0.0     3    56    12    65    10    82 0.91 Phosphoadenosine phosphosulfate reductase family
Arginosuc_synth      PF00764.14   388 sp|Q5HR20|QUEC_STAEQ -            223    0.0066   15.5   0.0   1   1   5.5e-06    0.0091   15.0   0.0     3    59    14    69    12    71 0.80 Arginosuccinate synthase
ATP_bind_4           PF01902.12   219 sp|Q5HR20|QUEC_STAEQ -            223      0.01   15.2   0.0   1   1   9.5e-06     0.016   14.6   0.0     2    31    10    39     9    70 0.80 ATP-binding region
zf-RING_4            PF14570.1     48 sp|Q5HR20|QUEC_STAEQ -            223      0.49   10.0   3.2   1   1   0.00023      0.37   10.4   0.9    27    44   190   207   188   209 0.92 RING/Ubox like zinc-binding domain
QueF                 PF14489.1     81 sp|Q5HR02|QUEF_STAEQ -            166   2.4e-34  117.1   0.0   1   1   4.6e-38   3.4e-34  116.6   0.0     1    79    63   141    63   143 0.98 QueF-like protein
QueF_N               PF14819.1    110 sp|Q5HR02|QUEF_STAEQ -            166   4.5e-05   23.4   0.0   1   1   8.7e-09   6.5e-05   22.9   0.0    30   101    39   112    23   120 0.70 Nitrile reductase, 7-cyano-7-deazaguanine-reductase N-term
RBFA                 PF02033.13   104 sp|Q5HPS1|RBFA_STAEQ -            116   3.3e-36  123.4   0.1   1   1   2.5e-40   3.8e-36  123.2   0.1     1   104     5   108     5   108 0.99 Ribosome-binding factor A
RbsD_FucU            PF05025.8    142 sp|Q5HL86|RBSD_STAEQ -            134   1.3e-39  135.7   0.4   1   1   1.9e-43   1.4e-39  135.6   0.4     1   142     1   134     1   134 0.99 RbsD / FucU transport protein family
DNA_photolyase       PF00875.13   165 sp|Q5HL86|RBSD_STAEQ -            134      0.16   11.7   0.0   1   1   2.5e-05      0.19   11.4   0.0    76   123    51    97    36   130 0.75 DNA photolyase
Sugar_transport      PF06800.7    269 sp|Q5HL85|RBSU_STAEQ -            293  7.8e-103  343.2  26.8   1   1  1.8e-106    9e-103  343.0  26.8     1   268    19   288    19   289 0.98 Sugar transport protein
EamA                 PF00892.15   126 sp|Q5HL85|RBSU_STAEQ -            293   0.00038   20.5  36.0   1   3     2e-06    0.0099   15.9  16.0    17   123    31   132    14   138 0.75 EamA-like transporter family
EamA                 PF00892.15   126 sp|Q5HL85|RBSU_STAEQ -            293   0.00038   20.5  36.0   3   3    0.0001      0.51   10.3  11.2    24   123   187   284   165   290 0.77 EamA-like transporter family
RecA                 PF00154.16   323 sp|Q5HPQ6|RECA_STAEQ -            349  1.3e-173  576.5   4.0   1   1    9e-177  1.5e-173  576.3   4.0     1   321     7   326     7   328 0.99 recA bacterial DNA recombination protein
Rad51                PF08423.6    256 sp|Q5HPQ6|RECA_STAEQ -            349     1e-08   34.4   0.1   1   1   2.1e-11   3.5e-08   32.6   0.1    14   224    33   228    19   239 0.80 Rad51
KaiC                 PF06745.8    227 sp|Q5HPQ6|RECA_STAEQ -            349     1e-08   34.5   1.0   1   1   6.7e-10   1.1e-06   27.9   1.0     8   163    46   203     9   252 0.71 KaiC
AAA_25               PF13481.1    194 sp|Q5HPQ6|RECA_STAEQ -            349   6.1e-05   22.4   0.2   1   1   1.3e-07   0.00021   20.7   0.2    28   158    53   153    44   181 0.77 AAA domain
Arch_ATPase          PF01637.13   234 sp|Q5HPQ6|RECA_STAEQ -            349    0.0028   17.4   0.0   1   1     3e-06     0.005   16.5   0.0    21    58    59    96    55   192 0.88 Archaeal ATPase
AAA_24               PF13479.1    213 sp|Q5HPQ6|RECA_STAEQ -            349    0.0069   15.9   0.0   1   1     8e-06     0.013   15.0   0.0     7    80    62   148    57   152 0.74 AAA domain
AAA                  PF00004.24   132 sp|Q5HPQ6|RECA_STAEQ -            349      0.11   12.7   0.0   1   1   0.00015      0.25   11.5   0.0     3    96    63   180    61   198 0.57 ATPase family associated with various cellular activities (AAA)
AAA_16               PF13191.1    185 sp|Q5HPQ6|RECA_STAEQ -            349      0.12   12.3   0.0   1   1   0.00011      0.19   11.7   0.0    23    81    57   112    46   196 0.65 AAA ATPase domain
SMC_N                PF02463.14   220 sp|Q5HK02|RECF_STAEQ -            371   5.9e-17   61.6   0.3   1   1   1.1e-19     2e-16   59.9   0.3     2   201     3   350     2   369 0.88 RecF/RecN/SMC N terminal domain
AAA_23               PF13476.1    202 sp|Q5HK02|RECF_STAEQ -            371   1.8e-12   47.9   4.8   1   1   1.6e-15   2.9e-12   47.3   4.8     2   185     6   236     5   302 0.51 AAA domain
AAA_21               PF13304.1    303 sp|Q5HK02|RECF_STAEQ -            371   2.1e-08   34.5   1.7   1   1   1.7e-10   3.1e-07   30.6   1.7     1   296    25   345    25   345 0.66 AAA domain
AAA_15               PF13175.1    415 sp|Q5HK02|RECF_STAEQ -            371   3.6e-08   32.8   0.4   1   2     2e-11   3.6e-08   32.8   0.4     3    72     5    97     3   111 0.72 AAA ATPase domain
AAA_29               PF13555.1     62 sp|Q5HK02|RECF_STAEQ -            371   0.00043   19.7   0.0   1   1   4.7e-07   0.00086   18.7   0.0     1    54     3    54     3    58 0.89 P-loop containing region of AAA domain
DUF2813              PF11398.3    373 sp|Q5HK02|RECF_STAEQ -            371    0.0012   18.0   1.0   1   3   1.5e-05     0.028   13.4   0.0     1    48     1    50     1    66 0.80 Protein of unknown function (DUF2813)
DUF2019              PF09450.5    106 sp|Q5HK02|RECF_STAEQ -            371     0.097   12.5   0.6   1   1   0.00015      0.27   11.1   0.6     5    43   131   169   127   208 0.76 Domain of unknown function (DUF2019)
DEAD                 PF00270.24   169 sp|Q5HPW4|RECG_STAEQ -            682   4.2e-22   78.4   1.7   1   2   1.6e-22   2.3e-19   69.4   0.3     2   164   263   420   262   424 0.78 DEAD/DEAH box helicase
Helicase_C           PF00271.26    78 sp|Q5HPW4|RECG_STAEQ -            682     8e-18   64.0   0.1   2   2   8.7e-18   1.3e-14   53.8   0.0     9    77   506   575   500   576 0.95 Helicase conserved C-terminal domain
ResIII               PF04851.10   184 sp|Q5HPW4|RECG_STAEQ -            682   2.4e-08   34.0   5.3   1   1   7.8e-11   1.1e-07   31.8   0.1     2   182   259   417   258   419 0.75 Type III restriction enzyme, res subunit
tRNA_anti-codon      PF01336.20    75 sp|Q5HPW4|RECG_STAEQ -            682    0.0012   18.6   0.0   1   1   2.1e-06    0.0031   17.3   0.0     1    63    63   128    63   148 0.91 OB-fold nucleic acid binding domain
HHH_5                PF14520.1     60 sp|Q5HPW4|RECG_STAEQ -            682    0.0014   18.7   0.1   1   1   2.6e-06    0.0038   17.3   0.1     6    33    12    39    11    44 0.93 Helix-hairpin-helix domain
AAA_19               PF13245.1     76 sp|Q5HPW4|RECG_STAEQ -            682     0.016   14.9   0.0   1   1   2.6e-05     0.038   13.7   0.0    14    62   285   329   274   354 0.78 Part of AAA domain
DUF2075              PF09848.4    352 sp|Q5HPW4|RECG_STAEQ -            682     0.017   14.0   0.1   2   2   1.2e-05     0.017   14.0   0.1     5   128   285   430   282   535 0.71 Uncharacterized conserved protein (DUF2075)
SecA_DEAD            PF07517.9    266 sp|Q5HPW4|RECG_STAEQ -            682     0.019   14.2   0.2   1   1   3.6e-05     0.054   12.7   0.1    96   158   287   348   277   380 0.83 SecA DEAD-like domain
UPF0079              PF02367.12   123 sp|Q5HPW4|RECG_STAEQ -            682     0.028   14.0   0.2   2   2   0.00027       0.4   10.3   0.0    19    62   285   331   270   335 0.79 Uncharacterised P-loop hydrolase UPF0079
AAA_30               PF13604.1    196 sp|Q5HPW4|RECG_STAEQ -            682     0.075   12.6   0.2   1   1   0.00012      0.18   11.3   0.0    18    67   281   330   260   403 0.67 AAA domain
RecO_N               PF11967.3     80 sp|Q5HNY1|RECO_STAEQ -            253   1.4e-18   66.4   0.0   1   1   6.7e-22   2.5e-18   65.7   0.0     1    79     1    77     1    78 0.97 Recombination protein O N terminal
RecO_C               PF02565.10   118 sp|Q5HNY1|RECO_STAEQ -            253     2e-16   59.9   0.6   1   1   7.1e-20   2.6e-16   59.5   0.6     2   117    83   239    82   240 0.97 Recombination protein O C terminal
RecO_N_2             PF13114.1     71 sp|Q5HNY1|RECO_STAEQ -            253   2.9e-07   30.0   1.0   1   1     1e-10   3.8e-07   29.7   0.2     2    70     6    79     5    80 0.93 RecO N terminal
MbeD_MobD            PF04899.7     70 sp|Q5HNY1|RECO_STAEQ -            253      0.61   10.0   4.0   1   2    0.0002      0.74    9.7   0.1     9    35    69    95    63   120 0.82 MbeD/MobD like
Toprim_4             PF13662.1     81 sp|Q5HRS7|RECR_STAEQ -            198   1.7e-24   85.6   0.0   1   1   1.8e-27   3.4e-24   84.6   0.0     2    81    81   171    80   171 0.96 Toprim domain
RecR                 PF02132.10    41 sp|Q5HRS7|RECR_STAEQ -            198   2.3e-16   58.9   0.6   1   1   2.5e-19   4.6e-16   57.9   0.6     2    41    39    78    38    78 0.96 RecR protein
Toprim               PF01751.17   100 sp|Q5HRS7|RECR_STAEQ -            198   1.6e-06   27.9   0.0   2   2   1.1e-08     2e-05   24.4   0.0     1    86    81   162    81   171 0.88 Toprim domain
HHH                  PF00633.18    30 sp|Q5HRS7|RECR_STAEQ -            198   0.00012   21.5   1.2   1   1   1.2e-07   0.00022   20.7   0.0    10    27    11    28     7    29 0.88 Helix-hairpin-helix motif
HHH_5                PF14520.1     60 sp|Q5HRS7|RECR_STAEQ -            198    0.0021   18.1   0.0   1   1   3.3e-06    0.0062   16.6   0.0     4    34    11    49     8   140 0.60 Helix-hairpin-helix domain
HHH_8                PF14716.1     68 sp|Q5HRS7|RECR_STAEQ -            198     0.008   16.3   0.0   1   1   8.9e-06     0.016   15.3   0.0    37    63     2    28     1    30 0.88 Helix-hairpin-helix domain
IMS_HHH              PF11798.3     32 sp|Q5HRS7|RECR_STAEQ -            198     0.045   13.8   0.0   1   1     7e-05      0.13   12.3   0.0    15    27    16    28    14    29 0.93 IMS family HHH motif
Cdd1                 PF11731.3     93 sp|Q5HRS7|RECR_STAEQ -            198     0.066   13.1   0.0   1   1   6.8e-05      0.13   12.2   0.0    11    63    11    70     1    89 0.76 Pathogenicity locus
RecU                 PF03838.9    165 sp|Q5HP94|RECU_STAEQ -            208   2.1e-72  242.0   4.9   1   1   1.7e-76   2.4e-72  241.8   4.9     2   165    32   199    31   199 0.99 Recombination protein U
RecX                 PF02631.11   122 sp|Q5HN61|RECX_STAEQ -            267   1.2e-27   96.4   5.2   1   2   3.2e-26   7.8e-23   80.9   1.8     1   118    84   203    84   212 0.90 RecX family
RecX                 PF02631.11   122 sp|Q5HN61|RECX_STAEQ -            267   1.2e-27   96.4   5.2   2   2   1.9e-06    0.0046   17.1   0.1    72   118   218   261   204   267 0.76 RecX family
Chalcone             PF02431.10   199 sp|Q5HN61|RECX_STAEQ -            267      0.13   11.5   4.5   2   2   4.8e-05      0.12   11.7   2.4    28   126   139   248   131   259 0.76 Chalcone-flavanone isomerase
DUF445               PF04286.7    367 sp|Q5HN61|RECX_STAEQ -            267      0.45    9.9   6.9   1   1   0.00029      0.72    9.3   6.7   124   245   138   255    68   266 0.71 Protein of unknown function (DUF445)
HD_4                 PF13328.1    153 sp|Q5HNR8|RELA_STAEQ -            729   1.7e-47  160.9   0.1   1   1   1.8e-50   3.9e-47  159.8   0.1     4   152    34   180    31   181 0.97 HD domain
RelA_SpoT            PF04607.12   116 sp|Q5HNR8|RELA_STAEQ -            729   8.1e-42  141.8   7.7   2   3   1.2e-44   2.5e-41  140.3   0.1     1   115   240   350   240   351 0.98 Region found in RelA / SpoT proteins
TGS                  PF02824.16    60 sp|Q5HNR8|RELA_STAEQ -            729   3.3e-21   74.8   0.0   1   1   3.7e-24   7.8e-21   73.6   0.0     1    60   395   454   395   454 0.97 TGS domain
ACT_4                PF13291.1     80 sp|Q5HNR8|RELA_STAEQ -            729   6.3e-17   61.6   3.5   1   1     3e-20   6.3e-17   61.6   3.5     2    80   649   726   648   726 0.97 ACT domain
HD                   PF01966.17   122 sp|Q5HNR8|RELA_STAEQ -            729   2.2e-11   43.8   1.1   1   1   2.2e-14   4.6e-11   42.7   0.3     2   122    51   149    50   149 0.93 HD domain
ACT                  PF01842.20    66 sp|Q5HNR8|RELA_STAEQ -            729   2.8e-05   23.4   0.3   1   1   3.5e-08   7.5e-05   22.1   0.3     3    65   656   719   654   720 0.96 ACT domain
Ub-Mut7C             PF14451.1     81 sp|Q5HNR8|RELA_STAEQ -            729      0.11   11.9   0.0   1   1   0.00015      0.31   10.5   0.0    53    78   432   457   421   459 0.82 Mut7-C ubiquitin
CoA_binding          PF02629.14    96 sp|Q5HMH1|REX_STAEQ  -            211   2.3e-25   88.9   0.7   1   1   2.8e-28   3.4e-25   88.3   0.4     3    95    84   179    82   180 0.96 CoA binding domain
Put_DNA-bind_N       PF06971.8     50 sp|Q5HMH1|REX_STAEQ  -            211     4e-24   84.1   0.3   1   1   7.2e-27   8.9e-24   83.0   0.3     2    50     6    54     5    54 0.99 Putative DNA-binding protein N-terminus
Semialdhyde_dh       PF01118.19   121 sp|Q5HMH1|REX_STAEQ  -            211   3.5e-07   30.5   0.0   1   1   4.1e-10   5.1e-07   30.0   0.0     1    96    86   176    86   192 0.85 Semialdehyde dehydrogenase, NAD binding domain
GFO_IDH_MocA         PF01408.17   120 sp|Q5HMH1|REX_STAEQ  -            211   5.6e-06   26.8   0.1   1   1   6.4e-09   7.9e-06   26.3   0.1     1    87    85   171    85   176 0.90 Oxidoreductase family, NAD-binding Rossmann fold
HTH_DeoR             PF08220.7     57 sp|Q5HMH1|REX_STAEQ  -            211    0.0023   17.4   0.0   1   1   3.8e-06    0.0047   16.4   0.0    16    49    34    65    25    67 0.87 DeoR-like helix-turn-helix domain
Gp_dh_N              PF00044.19   151 sp|Q5HMH1|REX_STAEQ  -            211    0.0054   16.6   1.3   2   2    0.0007      0.87    9.5   0.1    73   122   131   180   121   197 0.82 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain
F420_oxidored        PF03807.12    96 sp|Q5HMH1|REX_STAEQ  -            211     0.021   15.2   3.2   1   1   0.00011      0.14   12.6   3.2     1    82    86   168    86   175 0.66 NADP oxidoreductase coenzyme F420-dependent
CoA_binding_2        PF13380.1    116 sp|Q5HMH1|REX_STAEQ  -            211     0.052   13.7   0.1   1   1   7.4e-05     0.091   12.9   0.1    47    84   140   175   123   187 0.85 CoA binding domain
OCD_Mu_crystall      PF02423.10   314 sp|Q5HMH1|REX_STAEQ  -            211      0.11   11.2   0.0   1   1   0.00013      0.16   10.7   0.0   124   219    79   171    78   182 0.79 Ornithine cyclodeaminase/mu-crystallin family
PCRF                 PF03462.13   116 sp|Q5HMA4|RF1_STAEQ  -            358   1.2e-38  131.4   0.8   1   2   1.6e-42   1.2e-38  131.4   0.8     3   116    64   177    62   177 0.98 PCRF domain
RF-1                 PF00472.15   114 sp|Q5HMA4|RF1_STAEQ  -            358   1.4e-38  131.2   3.0   2   2   1.8e-42   1.4e-38  131.2   3.0     3   114   208   318   206   318 0.96 RF-1 domain
RF-1                 PF00472.15   114 sp|Q5HQX5|RF2_STAEQ  -            371   1.1e-41  141.2   0.6   1   1   2.1e-45   1.1e-41  141.2   0.6     3   114   227   338   225   338 0.98 RF-1 domain
PCRF                 PF03462.13   116 sp|Q5HQX5|RF2_STAEQ  -            371   1.8e-38  130.8   0.3   2   3   3.6e-42   1.8e-38  130.8   0.3     4   116    86   194    83   194 0.98 PCRF domain
DUF677               PF05055.7    336 sp|Q5HQX5|RF2_STAEQ  -            371     0.039   12.6   2.2   1   1   1.5e-05     0.074   11.7   2.2    53   111    51   110    12   116 0.81 Protein of unknown function (DUF677)
GTP_EFTU             PF00009.22   188 sp|Q5HQE4|RF3_STAEQ  -            520   7.7e-54  181.9   0.0   1   1   6.2e-57   1.3e-53  181.2   0.0     5   187    12   270     8   271 0.92 Elongation factor Tu GTP binding domain
GTP_EFTU_D2          PF03144.20    74 sp|Q5HQE4|RF3_STAEQ  -            520     9e-12   44.9   0.2   1   1     9e-15   1.9e-11   43.8   0.2     2    73   308   373   307   374 0.97 Elongation factor Tu domain 2
EFG_II               PF14492.1     75 sp|Q5HQE4|RF3_STAEQ  -            520     2e-08   33.9   0.1   1   1     3e-11   6.4e-08   32.3   0.1     4    74   390   459   388   460 0.95 Elongation Factor G, domain II
Miro                 PF08477.8    119 sp|Q5HQE4|RF3_STAEQ  -            520   1.1e-06   29.1   0.1   1   1   1.9e-09   3.9e-06   27.3   0.1     3   119    14   142    12   142 0.86 Miro-like protein
MMR_HSR1             PF01926.18   116 sp|Q5HQE4|RF3_STAEQ  -            520     2e-06   27.7   0.0   1   1     3e-09   6.3e-06   26.1   0.0     2   116    13   140    12   170 0.68 50S ribosome-binding GTPase
FeoB_N               PF02421.13   156 sp|Q5HQE4|RF3_STAEQ  -            520    0.0021   17.3   0.1   2   2   5.3e-05      0.11   11.7   0.0    31   137    63   162    52   172 0.71 Ferrous iron transport protein B
SRPRB                PF09439.5    181 sp|Q5HQE4|RF3_STAEQ  -            520     0.068   12.3   0.2   1   1   0.00028       0.6    9.3   0.2     3    83    10   110     8   122 0.63 Signal recognition particle receptor beta subunit
DHBP_synthase        PF00926.14   194 sp|Q5HNE3|RIBBA_STAEQ -            393   1.8e-79  265.5   0.5   1   1   3.1e-83   2.3e-79  265.1   0.5     1   194     6   198     6   198 0.99 3,4-dihydroxy-2-butanone 4-phosphate synthase
GTP_cyclohydro2      PF00925.15   169 sp|Q5HNE3|RIBBA_STAEQ -            393   4.7e-65  217.9   0.0   2   2   1.8e-68   1.3e-64  216.4   0.0     5   168   209   369   205   370 0.97 GTP cyclohydrolase II
RimM                 PF01782.13    84 sp|Q5HPV2|RIMM_STAEQ -            167   4.9e-23   80.8   0.1   1   1   1.5e-26   7.2e-23   80.3   0.1     1    83     4    86     4    87 0.95 RimM N-terminal domain
PRC                  PF05239.11    79 sp|Q5HPV2|RIMM_STAEQ -            167     6e-12   45.2   2.7   1   1   3.3e-15   1.6e-11   43.8   2.7     2    79    95   166    94   166 0.95 PRC-barrel domain
DUF150               PF02576.12   141 sp|Q5HPS6|RIMP_STAEQ -            155   1.9e-46  157.1   0.1   1   1   1.4e-50   2.1e-46  156.9   0.1     1   140    11   150    11   151 0.99 Uncharacterised BCR, YhbC family COG0779
DMRL_synthase        PF00885.14   144 sp|Q5HNE4|RISB_STAEQ -            153   6.7e-59  197.6   0.8   1   1     5e-63   7.4e-59  197.5   0.8     2   144    10   152     9   152 0.98 6,7-dimethyl-8-ribityllumazine synthase
Ribosomal_L10        PF00466.15   100 sp|Q5HRL3|RL10_STAEQ -            166   6.5e-30  103.0   0.2   1   1   1.2e-33   8.6e-30  102.6   0.2     4   100     6   101     3   101 0.97 Ribosomal protein L10
Apolipoprotein       PF01442.13   202 sp|Q5HRL3|RL10_STAEQ -            166     0.045   13.2   0.3   1   1   7.9e-06     0.058   12.8   0.3    59   104     6    51     1    74 0.85 Apolipoprotein A1/A4/E domain
Ribosomal_L11_N      PF03946.9     60 sp|Q5HRL5|RL11_STAEQ -            140   8.7e-32  108.3   0.3   1   1   2.1e-35   1.5e-31  107.5   0.3     1    60     8    66     8    66 0.97 Ribosomal protein L11, N-terminal domain
Ribosomal_L11        PF00298.14    69 sp|Q5HRL5|RL11_STAEQ -            140   2.1e-31  107.8   1.9   1   1   2.8e-35   2.1e-31  107.8   1.9     1    69    71   139    71   139 0.99 Ribosomal protein L11, RNA binding domain
Ribosomal_L13        PF00572.13   128 sp|Q5HM31|RL13_STAEQ -            145   5.8e-52  175.0   0.0   1   1   4.5e-56   6.6e-52  174.9   0.0     1   127    16   142    16   143 0.99 Ribosomal protein L13
Ribosomal_L14        PF00238.14   122 sp|Q5HM09|RL14_STAEQ -            122   2.5e-51  172.5   0.7   1   1   1.8e-55   2.7e-51  172.4   0.7     1   122     1   122     1   122 0.99 Ribosomal protein L14p/L23e
Ribosomal_L18e       PF00828.14   129 sp|Q5HM18|RL15_STAEQ -            146   1.1e-32  113.1   2.3   1   1     1e-36   1.5e-32  112.6   2.3     3   128    27   145    26   146 0.93 Ribosomal protein L18e/L15
Ribosomal_L16        PF00252.13   133 sp|Q5HM06|RL16_STAEQ -            144   2.1e-53  179.6   1.1   1   1   1.6e-57   2.3e-53  179.4   1.1     1   133     4   133     4   133 0.99 Ribosomal protein L16p/L10e
Ribosomal_L17        PF01196.14    97 sp|Q5HM26|RL17_STAEQ -            122   7.1e-39  132.2   0.3   1   1   1.8e-42   8.8e-39  131.9   0.3     1    97    16   122    16   122 0.93 Ribosomal protein L17
EcoEI_R_C            PF08463.5    164 sp|Q5HM26|RL17_STAEQ -            122     0.023   14.5   0.1   1   1   5.6e-06     0.028   14.2   0.1    29   119     8    95     4   118 0.73 EcoEI R protein C-terminal
DUF4172              PF13776.1     82 sp|Q5HM26|RL17_STAEQ -            122     0.074   13.1   0.5   1   2   0.00013      0.64   10.1   0.1    41    78     9    46     2    50 0.89 Domain of unknown function (DUF4172)
Ribosomal_L18p       PF00861.17   119 sp|Q5HM15|RL18_STAEQ -            120   2.8e-37  127.5   3.5   1   1   4.3e-41   3.2e-37  127.3   3.5     2   119     7   120     6   120 0.96 Ribosomal L18p/L5e family
Ribosomal_S11        PF00411.14   110 sp|Q5HM15|RL18_STAEQ -            120     0.018   15.2   0.2   1   1   3.3e-06     0.025   14.7   0.2    16    67    45    96    33   119 0.85 Ribosomal protein S11
Ribosomal_L19        PF01245.15   113 sp|Q5HPV0|RL19_STAEQ -            116   5.2e-49  164.7   3.5   1   1   3.9e-53   5.8e-49  164.5   3.5     2   112     5   115     4   116 0.98 Ribosomal protein L19
Ribosomal_L1         PF00687.16   220 sp|Q5HRL4|RL1_STAEQ  -            231   2.4e-52  177.4   0.1   1   1   5.5e-56   2.7e-52  177.2   0.1     4   220    26   221     3   221 0.92 Ribosomal protein L1p/L10e family
MRL1                 PF13003.2    134 sp|Q5HRL4|RL1_STAEQ  -            231     0.011   15.6   0.0   1   1   3.7e-06     0.018   14.8   0.0    58   134     8   146     3   146 0.88 Ribosomal protein L1
Ribosomal_L20        PF00453.13   108 sp|Q5HNM5|RL20_STAEQ -            118   5.9e-49  164.4   6.0   1   1   4.6e-53   6.8e-49  164.3   6.0     2   108     3   109     2   109 0.99 Ribosomal protein L20
Ribosomal_L21p       PF00829.16    96 sp|Q5HNQ4|RL21_STAEQ -            102   1.6e-39  133.9   1.3   1   1   1.2e-43   1.8e-39  133.7   1.3     1    96     1    95     1    95 0.99 Ribosomal prokaryotic L21 protein
Ribosomal_L22        PF00237.14   105 sp|Q5HM04|RL22_STAEQ -            117   5.6e-39  132.3   1.1   1   1   8.6e-43   6.4e-39  132.1   1.1     1   104     5   108     5   109 0.98 Ribosomal protein L22p/L17e
DUF830               PF05708.7    158 sp|Q5HM04|RL22_STAEQ -            117     0.058   13.3   0.2   1   2   8.4e-05      0.62   10.0   0.0    63   122    28    79    12    93 0.77 Orthopoxvirus protein of unknown function (DUF830)
Ribosomal_L23        PF00276.15    92 sp|Q5HM01|RL23_STAEQ -             91   4.8e-29  100.1   4.0   1   1   6.8e-33   5.1e-29  100.0   4.0     2    85     5    87     4    91 0.97 Ribosomal protein L23
Laps                 PF10169.4    128 sp|Q5HM01|RL23_STAEQ -             91     0.052   13.7   2.8   1   1   1.1e-05     0.079   13.2   2.8    62   112    26    83     4    90 0.61 Learning-associated protein
KOW                  PF00467.24    32 sp|Q5HM10|RL24_STAEQ -            105   4.2e-09   35.7   6.9   1   2   5.6e-13   4.2e-09   35.7   6.9     1    32     5    36     5    36 0.98 KOW motif
GTP_EFTU_D2          PF03144.20    74 sp|Q5HM10|RL24_STAEQ -            105      0.49   10.5   5.1   1   2   2.6e-05      0.19   11.8   2.3    13    54     3    40     2    77 0.89 Elongation factor Tu domain 2
Ribosomal_TL5_C      PF14693.1     88 sp|Q5HRQ4|RL25_STAEQ -            219   1.4e-25   89.3   4.5   1   1   3.1e-29   2.3e-25   88.6   4.5     2    87    99   184    98   185 0.97 Ribosomal protein TL5, C-terminal domain
Ribosomal_L25p       PF01386.14    88 sp|Q5HRQ4|RL25_STAEQ -            219   1.3e-24   86.1   0.2   1   1   3.6e-28   2.7e-24   85.0   0.2     6    88     9    91     4    91 0.93 Ribosomal L25p family
Ribosomal_L27        PF01016.14    81 sp|Q5HNQ6|RL27_STAEQ -             94   1.5e-35  120.8   3.5   1   1   1.1e-39   1.6e-35  120.6   3.5     1    81    10    90    10    90 0.99 Ribosomal L27 protein
Ribosomal_L28        PF00830.14    61 sp|Q5HPW7|RL28_STAEQ -             62   4.6e-18   64.8   3.8   1   1   3.4e-22     5e-18   64.6   3.8     1    56     3    56     3    61 0.96 Ribosomal L28 family
Ribosomal_L29        PF00831.18    58 sp|Q5HM07|RL29_STAEQ -             69   3.1e-25   87.6   7.4   1   1   4.8e-29   3.6e-25   87.4   7.4     1    58     3    60     3    60 0.99 Ribosomal L29 protein
Cob_adeno_trans      PF01923.13   163 sp|Q5HM07|RL29_STAEQ -             69    0.0088   15.8   1.2   1   1   1.3e-06    0.0093   15.7   1.2    48    94    11    64     2    69 0.73 Cobalamin adenosyltransferase
Ribosomal_L2_C       PF03947.13   130 sp|Q5HM02|RL2_STAEQ  -            277   6.6e-59  197.3   2.2   2   2   8.9e-63   6.6e-59  197.3   2.2     1   130   124   253   124   253 0.99 Ribosomal Proteins L2, C-terminal domain
Ribosomal_L2         PF00181.18    77 sp|Q5HM02|RL2_STAEQ  -            277   1.3e-36  124.4   1.1   1   3   3.5e-39   2.6e-35  120.2   1.6     1    77    42   118    42   118 0.99 Ribosomal Proteins L2, RNA binding domain
Ribosomal_L30        PF00327.15    52 sp|Q5HM17|RL30_STAEQ -             60     3e-22   77.9   0.6   1   1   2.2e-26   3.3e-22   77.8   0.6     2    51     4    53     3    54 0.97 Ribosomal protein L30p/L7e
Ribosomal_L31        PF01197.13    69 sp|Q5HMA2|RL31B_STAEQ -             85   2.2e-29  101.2   0.1   1   1   1.8e-33   2.6e-29  100.9   0.1     1    68     1    80     1    81 0.99 Ribosomal protein L31
Ribosomal_L32p       PF01783.18    56 sp|Q5HQ39|RL32_STAEQ -             57   3.2e-27   94.4   5.8   1   1   2.8e-30   3.4e-27   94.3   5.8     1    56     2    57     2    57 0.98 Ribosomal L32p protein family
zf-ribbon_3          PF13248.1     26 sp|Q5HQ39|RL32_STAEQ -             57   3.5e-05   22.8   3.6   1   1   4.4e-08   5.4e-05   22.2   3.6     3    24    28    48    26    49 0.91 zinc-ribbon domain
DZR                  PF12773.2     50 sp|Q5HQ39|RL32_STAEQ -             57    0.0013   18.5   1.1   1   1   1.3e-06    0.0017   18.1   1.1    25    50    27    47     8    50 0.81 Double zinc ribbon
Zn-ribbon_8          PF09723.5     42 sp|Q5HQ39|RL32_STAEQ -             57    0.0065   16.3   2.4   1   2   9.3e-05      0.11   12.4   0.1    19    36    20    37    13    42 0.78 Zinc ribbon domain
PolC_DP2             PF03833.8    900 sp|Q5HQ39|RL32_STAEQ -             57     0.015   13.0   0.8   1   1   1.1e-05     0.014   13.1   0.8   643   677    14    50     2    57 0.61 DNA polymerase II large subunit DP2
zf-tcix              PF14952.1     44 sp|Q5HQ39|RL32_STAEQ -             57     0.017   14.4   6.6   1   2   4.1e-05     0.051   12.9   1.7     8    30    24    45    12    45 0.89 Putative treble-clef, zinc-finger, Zn-binding
NRDD                 PF13597.1    546 sp|Q5HQ39|RL32_STAEQ -             57     0.021   12.9   1.2   1   1   1.6e-05      0.02   13.0   1.2   482   516    17    52     5    57 0.74 Anaerobic ribonucleoside-triphosphate reductase
HNH_5                PF14279.1     71 sp|Q5HQ39|RL32_STAEQ -             57     0.061   13.3   2.0   1   1     5e-05     0.062   13.3   2.0    24    44    33    54     7    57 0.91 HNH endonuclease
Ribosomal_L33        PF00471.15    48 sp|Q5HNZ8|RL331_STAEQ -             49   1.6e-23   82.6   6.9   1   1   1.2e-27   1.7e-23   82.5   6.9     1    48     2    49     2    49 0.99 Ribosomal protein L33
Ribosomal_L33        PF00471.15    48 sp|Q5HPK7|RL332_STAEQ -             49     4e-25   87.7   7.4   1   1   2.9e-29   4.3e-25   87.6   7.4     1    48     2    49     2    49 0.99 Ribosomal protein L33
Ribosomal_L33        PF00471.15    48 sp|Q5HRL8|RL333_STAEQ -             47   2.3e-16   59.7   5.7   1   1   2.4e-19   2.5e-16   59.6   5.7     2    48     2    47     1    47 0.94 Ribosomal protein L33
zf-ribbon_3          PF13248.1     26 sp|Q5HRL8|RL333_STAEQ -             47    0.0014   17.7   3.2   2   2   0.00025      0.27   10.5   0.1     2    12    31    42    30    47 0.74 zinc-ribbon domain
Ribosomal_L37e       PF01907.14    55 sp|Q5HRL8|RL333_STAEQ -             47     0.013   15.3   2.4   1   2   5.9e-05     0.062   13.1   0.1    13    34     3    24     1    29 0.85 Ribosomal protein L37e
DZR                  PF12773.2     50 sp|Q5HRL8|RL333_STAEQ -             47     0.034   13.9   3.7   1   1   0.00014      0.14   11.9   3.7    15    41     8    44     2    47 0.75 Double zinc ribbon
HypA                 PF01155.14   113 sp|Q5HRL8|RL333_STAEQ -             47     0.038   13.6   1.0   1   1   4.5e-05     0.048   13.3   1.0    68    98     3    43     1    47 0.72 Hydrogenase expression/synthesis hypA family
NOB1_Zn_bind         PF08772.6     73 sp|Q5HRL8|RL333_STAEQ -             47     0.087   12.6   5.2   2   2   0.00025      0.26   11.1   0.2    19    37    26    44    23    46 0.86 Nin one binding (NOB1) Zn-ribbon like
Nop10p               PF04135.7     53 sp|Q5HRL8|RL333_STAEQ -             47      0.12   12.1   2.1   1   1   0.00022      0.24   11.1   2.1     6    28     6    42     1    44 0.80 Nucleolar RNA-binding protein, Nop10p family
Ribosomal_L34        PF00468.12    44 sp|Q5HS38|RL34_STAEQ -             45     4e-23   80.8  13.1   1   1   2.9e-27   4.3e-23   80.7  13.1     2    44     3    45     2    45 0.98 Ribosomal protein L34
Ribosomal_L35p       PF01632.14    61 sp|Q5HNM4|RL35_STAEQ -             66   2.3e-23   81.8  12.0   1   1   1.7e-27   2.6e-23   81.6  12.0     1    61     2    62     2    62 0.99 Ribosomal protein L35
Ribosomal_L36        PF00444.13    38 sp|Q5HM22|RL36_STAEQ -             37   1.3e-20   73.0  10.6   1   1   9.3e-25   1.4e-20   72.9  10.6     1    38     1    37     1    37 0.99 Ribosomal protein L36
Ribosomal_L3         PF00297.17   263 sp|Q5HLZ9|RL3_STAEQ  -            220   1.1e-44  152.7  10.3   1   1   2.4e-47   3.6e-43  147.8  10.3     1   262     9   211     9   212 0.88 Ribosomal protein L3
Ribosomal_L4         PF00573.17   192 sp|Q5HM00|RL4_STAEQ  -            207   6.1e-71  237.7   0.7   1   1   4.7e-75   6.9e-71  237.6   0.7     1   191    17   204    17   205 0.99 Ribosomal protein L4/L1 family
Ribosomal_L5_C       PF00673.16    95 sp|Q5HM11|RL5_STAEQ  -            179     9e-42  140.7   0.0   1   1   3.6e-45   1.3e-41  140.1   0.0     1    94    84   177    84   178 0.99 ribosomal L5P family C-terminus
Ribosomal_L5         PF00281.14    56 sp|Q5HM11|RL5_STAEQ  -            179   3.6e-27   93.8   0.2   1   1   2.9e-30   1.1e-26   92.3   0.2     1    56    24    80    24    80 0.98 Ribosomal protein L5
Urocanase            PF01175.13   546 sp|Q5HM11|RL5_STAEQ  -            179     0.029   12.4   0.0   1   1     1e-05     0.038   12.0   0.0    31    89    24    84     4    89 0.85 Urocanase
DUF2660              PF10859.3     86 sp|Q5HM11|RL5_STAEQ  -            179     0.044   13.9   0.1   1   1   2.6e-05     0.097   12.9   0.1    49    82     7    40     2    42 0.93 Protein of unknown function (DUF2660)
Ribosomal_L6         PF00347.18    77 sp|Q5HM14|RL6_STAEQ  -            178   1.1e-43  147.5   4.7   1   2     1e-24   1.5e-20   73.4   0.2     1    77    11    82    11    82 0.99 Ribosomal protein L6
Ribosomal_L6         PF00347.18    77 sp|Q5HM14|RL6_STAEQ  -            178   1.1e-43  147.5   4.7   2   2   1.4e-25   2.1e-21   76.2   0.8     1    76    90   164    90   165 0.98 Ribosomal protein L6
Ribosomal_L12        PF00542.14    68 sp|Q5HRL2|RL7_STAEQ  -            122   7.9e-29   99.4  12.4   2   2   3.8e-32   1.9e-28   98.2   8.4     1    68    55   122    55   122 0.99 Ribosomal protein L7/L12 C-terminal domain
PTS_IIA              PF02255.11    96 sp|Q5HRL2|RL7_STAEQ  -            122     0.098   12.5   0.7   2   2     4e-05       0.2   11.5   0.1     9    47    61    99    52   119 0.92 PTS system, Lactose/Cellobiose specific IIA subunit
Bac_DNA_binding      PF00216.16    90 sp|Q5HRL2|RL7_STAEQ  -            122      0.17   11.9   3.7   2   2    0.0001       0.5   10.4   0.5     3    41    67   105    65   115 0.89 Bacterial DNA-binding protein
Ribosomal_L9_C       PF03948.9     87 sp|Q5HK14|RL9_STAEQ  -            148   4.2e-28   97.2   2.4   1   1   2.1e-31   6.1e-28   96.7   2.4     2    86    63   147    62   148 0.97 Ribosomal protein L9, C-terminal domain
Ribosomal_L9_N       PF01281.14    48 sp|Q5HK14|RL9_STAEQ  -            148   2.4e-21   74.6   1.6   1   1   1.5e-24   4.3e-21   73.8   1.6     1    48     1    48     1    48 0.99 Ribosomal protein L9, N-terminal domain
DUF4140              PF13600.1    104 sp|Q5HK14|RL9_STAEQ  -            148     0.014   15.8   0.7   1   2   0.00021      0.61   10.5   0.5    62   101    34    73     8    85 0.75 N-terminal domain of unknown function (DUF4140)
DUF2321              PF10083.4    158 sp|Q5HK14|RL9_STAEQ  -            148     0.023   14.1   0.8   1   1   1.1e-05     0.031   13.7   0.8    79   148    41   111    33   114 0.92 Uncharacterized protein conserved in bacteria (DUF2321)
DUF3847              PF12958.2     86 sp|Q5HK14|RL9_STAEQ  -            148       2.9    7.7   8.7   1   1   7.7e-05      0.23   11.2   4.0     3    35    44    76    42    83 0.93 Protein of unknown function (DUF3847)
SPOUT_MTase          PF02590.12   155 sp|Q5HK23|RLMH_STAEQ -            159   6.5e-62  207.8   1.5   1   1   1.5e-65   7.2e-62  207.6   1.5     1   155     1   158     1   158 0.99 Predicted SPOUT methyltransferase
Methyltrn_RNA_4      PF09936.4    185 sp|Q5HK23|RLMH_STAEQ -            159     0.049   13.1   0.1   1   1   1.2e-05     0.057   12.9   0.1   116   158    84   126    14   139 0.82 SAM-dependent RNA methyltransferase
Ribosomal_L25p       PF01386.14    88 sp|Q5HK23|RLMH_STAEQ -            159     0.055   13.5   0.2   1   1   1.8e-05     0.089   12.9   0.2    38    80    54    98    45   102 0.86 Ribosomal L25p family
Radical_SAM          PF04055.16   166 sp|Q5HPX3|RLMN_STAEQ -            364   1.6e-13   51.1   0.3   1   2     9e-17   4.4e-13   49.7   0.1     1   165   121   291   121   295 0.86 Radical SAM superfamily
Fer4_14              PF13394.1    119 sp|Q5HPX3|RLMN_STAEQ -            364   1.5e-05   24.9   0.0   1   1     1e-08   5.1e-05   23.2   0.0     7    96   126   219   121   241 0.66 4Fe-4S single cluster domain
Fer4_12              PF13353.1    139 sp|Q5HPX3|RLMN_STAEQ -            364   9.2e-05   22.5   0.5   2   2   5.3e-08   0.00026   21.1   0.0    12    96   124   211   113   252 0.72 4Fe-4S single cluster domain
RNase_HII            PF01351.13   198 sp|Q5HPU6|RNH2_STAEQ -            256   6.7e-46  156.4   0.1   2   2   4.5e-50   6.7e-46  156.4   0.1     1   197    75   250    75   251 0.97 Ribonuclease HII
RNase_HII            PF01351.13   198 sp|Q5HQ34|RNH3_STAEQ -            308     4e-41  140.8   1.3   1   1   1.1e-44   5.6e-41  140.3   1.3     1   197    91   294    91   295 0.94 Ribonuclease HII
DUF3378              PF11858.3     82 sp|Q5HQ34|RNH3_STAEQ -            308   3.9e-24   84.5   3.3   1   1   2.6e-27   1.3e-23   82.8   3.3     2    81     3    79     2    81 0.94 Domain of unknown function (DUF3378)
TBP                  PF00352.16    86 sp|Q5HQ34|RNH3_STAEQ -            308     0.012   14.9   0.0   1   1   7.8e-06     0.038   13.3   0.0    24    70    13    60     3    66 0.77 Transcription factor TFIID (or TATA-binding protein, TBP)
Lactamase_B          PF00753.22   194 sp|Q5HQ80|RNJ1_STAEQ -            560   1.3e-30  106.4   2.4   1   1   4.4e-34   2.2e-30  105.7   2.4     2   157    18   176    17   214 0.94 Metallo-beta-lactamase superfamily
RMMBL                PF07521.7     43 sp|Q5HQ80|RNJ1_STAEQ -            560   2.3e-10   40.1   0.1   1   1     1e-13   5.1e-10   39.0   0.1     8    43   359   394   355   394 0.95 RNA-metabolising metallo-beta-lactamase
Lactamase_B_2        PF12706.2    194 sp|Q5HQ80|RNJ1_STAEQ -            560   2.9e-10   40.0   0.2   1   1   1.2e-13   5.7e-10   39.0   0.2    22   156    62   197    33   255 0.74 Beta-lactamase superfamily domain
Lactamase_B          PF00753.22   194 sp|Q5HPR6|RNJ2_STAEQ -            557   1.9e-20   73.3   0.1   1   1     1e-23     3e-20   72.6   0.1     2   152    20   173    19   204 0.93 Metallo-beta-lactamase superfamily
RMMBL                PF07521.7     43 sp|Q5HPR6|RNJ2_STAEQ -            557   3.6e-10   39.5   0.8   2   2   7.9e-13   2.3e-09   36.8   0.0     3    42   359   395   357   396 0.92 RNA-metabolising metallo-beta-lactamase
Lactamase_B_2        PF12706.2    194 sp|Q5HPR6|RNJ2_STAEQ -            557   0.00011   21.7   0.1   1   1   7.8e-08   0.00023   20.7   0.1    27   179    63   215    35   231 0.71 Beta-lactamase superfamily domain
vATP-synt_E          PF01991.13   198 sp|Q5HPR6|RNJ2_STAEQ -            557    0.0065   15.7   2.2   2   2   6.7e-06      0.02   14.1   1.6     3    41   503   541   501   549 0.88 ATP synthase (E/31 kDa) subunit
HTH_10               PF04967.7     53 sp|Q5HPR6|RNJ2_STAEQ -            557     0.032   13.8   0.6   1   2   6.4e-05      0.19   11.3   0.0    10    23   267   280   264   283 0.89 HTH DNA binding domain
Ribonuclease_P       PF00825.13   111 sp|Q5HS37|RNPA_STAEQ -            115   9.1e-31  106.0   5.1   1   1   6.9e-35     1e-30  105.8   5.1     1   110     1   107     1   108 0.95 Ribonuclease P
DUF3552              PF12072.3    201 sp|Q5HPQ5|RNY_STAEQ  -            519   2.7e-62  209.5  39.3   1   2   1.3e-64   1.4e-61  207.2  36.9     3   201     6   204     4   204 0.99 Domain of unknown function (DUF3552)
HD                   PF01966.17   122 sp|Q5HPQ5|RNY_STAEQ  -            519   9.3e-19   67.6   5.3   2   2   8.8e-22   9.3e-19   67.6   5.3     2   121   336   427   335   428 0.95 HD domain
KH_1                 PF00013.24    60 sp|Q5HPQ5|RNY_STAEQ  -            519   8.8e-09   34.8   0.1   1   1   3.1e-11   3.3e-08   33.0   0.1     4    58   213   267   210   269 0.86 KH domain
HDOD                 PF08668.7    196 sp|Q5HPQ5|RNY_STAEQ  -            519     2e-06   27.2   0.4   2   3   8.4e-08   8.9e-05   21.8   0.2    94   152   334   391   326   400 0.86 HDOD domain
KH_4                 PF13083.1     73 sp|Q5HPQ5|RNY_STAEQ  -            519    0.0013   18.3   0.1   1   1   1.2e-06    0.0013   18.3   0.1     2    58   183   239   182   243 0.65 KH domain
KH_3                 PF13014.1     43 sp|Q5HPQ5|RNY_STAEQ  -            519    0.0057   16.2   0.5   1   1   1.4e-05     0.014   14.9   0.5     3    38   222   251   220   256 0.85 KH domain
ATP-synt_B           PF00430.13   132 sp|Q5HPQ5|RNY_STAEQ  -            519     0.015   15.1  11.3   1   2   1.4e-05     0.015   15.1  11.3    58   109    30    81    24    86 0.91 ATP synthase B/B' CF(0)
KH_2                 PF07650.12    78 sp|Q5HPQ5|RNY_STAEQ  -            519     0.033   13.7   4.2   1   1   3.2e-05     0.034   13.7   0.5    35    58   220   243   188   255 0.87 KH domain
Ceramidase_alk       PF04734.8    674 sp|Q5HPQ5|RNY_STAEQ  -            519      0.07   10.9   0.6   1   2   0.00017      0.18    9.6   0.2    78    98   387   407   368   421 0.85 Neutral/alkaline non-lysosomal ceramidase
HAMP                 PF00672.20    70 sp|Q5HPQ5|RNY_STAEQ  -            519     0.098   12.8   1.0   1   1   0.00056       0.6   10.3   0.2     2    25     6    29     5    40 0.91 HAMP domain
Glt_symporter        PF03616.9    368 sp|Q5HPQ5|RNY_STAEQ  -            519      0.11   10.9   0.1   1   1   0.00021      0.22    9.9   0.1   166   216    11    61     4    69 0.75 Sodium/glutamate symporter
CemA                 PF03040.9    230 sp|Q5HPQ5|RNY_STAEQ  -            519      0.57    9.7  15.3   2   3   0.00074      0.78    9.2   4.9    41   111   139   215   121   225 0.62 CemA family
G-7-MTase            PF12803.2    325 sp|Q5HPQ5|RNY_STAEQ  -            519      0.77    8.8   4.8   2   2   0.00017      0.18   10.9   0.8    97   145   110   158   103   197 0.85 mRNA (guanine-7-)methyltransferase (G-7-MTase)
Lactamase_B_2        PF12706.2    194 sp|Q5HP47|RNZ_STAEQ  -            306   1.5e-25   89.8   0.3   1   1   5.5e-29     2e-25   89.4   0.3     3   194    34   270    32   270 0.81 Beta-lactamase superfamily domain
Lactamase_B          PF00753.22   194 sp|Q5HP47|RNZ_STAEQ  -            306   9.8e-13   48.1   0.1   1   1   4.9e-16   1.8e-12   47.3   0.1    14    87    30    99    17   170 0.87 Metallo-beta-lactamase superfamily
Lactamase_B_4        PF13691.1     63 sp|Q5HP47|RNZ_STAEQ  -            306   5.5e-08   32.1   0.0   1   1   3.2e-11   1.2e-07   31.1   0.0     8    58    17    66    11    78 0.79 tRNase Z endonuclease
PDEase_II            PF02112.10   335 sp|Q5HP47|RNZ_STAEQ  -            306     0.043   12.7   0.3   1   3   1.1e-05     0.043   12.7   0.3    78   125    54   103    19   113 0.82 cAMP phosphodiesterases class-II
Aldedh               PF00171.17   462 sp|Q5HL59|ROCA_STAEQ -            514  8.8e-155  515.5   0.1   1   1  2.2e-158  1.1e-154  515.2   0.1     6   462    49   510    45   510 0.96 Aldehyde dehydrogenase family
Rib_5-P_isom_A       PF06026.9    173 sp|Q5HLQ9|RPIA_STAEQ -            230     1e-63  213.7   0.5   1   1   2.6e-67   1.3e-63  213.4   0.5     1   173    51   224    51   224 0.99 Ribose 5-phosphate isomerase A (phosphoriboisomerase A)
DeoRC                PF00455.17   162 sp|Q5HLQ9|RPIA_STAEQ -            230   0.00019   21.1   1.3   1   2   3.9e-06     0.019   14.5   0.2    14    51    15    57     5    72 0.76 DeoR C terminal sensor domain
Sugar-bind           PF04198.8    255 sp|Q5HLQ9|RPIA_STAEQ -            230     0.064   12.1   0.1   1   1   2.1e-05       0.1   11.4   0.1    48    83    17    53     5    74 0.78 Putative sugar-binding domain
RNA_pol_A_CTD        PF03118.10    67 sp|Q5HM25|RPOA_STAEQ -            314   9.1e-29   98.6   4.0   1   1   7.2e-32   1.8e-28   97.7   4.0     2    66   240   304   239   305 0.96 Bacterial RNA polymerase, alpha chain C terminal domain
RNA_pol_A_bac        PF01000.21   112 sp|Q5HM25|RPOA_STAEQ -            314   1.4e-22   79.9   0.6   1   2   5.8e-26   1.4e-22   79.9   0.6    13   110    59   152    54   171 0.92 RNA polymerase Rpb3/RpoA insert domain
RNA_pol_L            PF01193.19    66 sp|Q5HM25|RPOA_STAEQ -            314   1.8e-20   71.8   0.0   1   1   1.3e-23   3.3e-20   70.9   0.0     2    66    26   222    25   222 0.94 RNA polymerase Rpb3/Rpb11 dimerisation domain
HHH_5                PF14520.1     60 sp|Q5HM25|RPOA_STAEQ -            314    0.0068   16.5   0.1   1   1   1.1e-05     0.026   14.6   0.0    21    53   266   298   264   301 0.95 Helix-hairpin-helix domain
DUF2325              PF10087.4     98 sp|Q5HM25|RPOA_STAEQ -            314      0.11   12.3   0.1   1   1   7.3e-05      0.18   11.6   0.1    21    92   230   299   216   305 0.83 Uncharacterized protein conserved in bacteria (DUF2325)
RNA_pol_Rpb2_6       PF00562.23   386 sp|Q5HRL0|RPOB_STAEQ -           1183  8.7e-164  544.8   0.0   2   2  1.7e-165  4.2e-162  539.2   0.0     2   386   673  1069   672  1069 0.97 RNA polymerase Rpb2, domain 6
RNA_pol_Rpb2_1       PF04563.10   203 sp|Q5HRL0|RPOB_STAEQ -           1183   8.8e-38  129.2   0.0   1   1   6.6e-41   1.6e-37  128.4   0.0     1   203    28   464    28   464 0.99 RNA polymerase beta subunit
RNA_pol_Rpb2_2       PF04561.9    190 sp|Q5HRL0|RPOB_STAEQ -           1183   7.7e-36  123.2   0.0   1   2   1.5e-31   3.6e-28   98.2   0.0     1   155   140   289   140   296 0.96 RNA polymerase Rpb2, domain 2
RNA_pol_Rpb2_2       PF04561.9    190 sp|Q5HRL0|RPOB_STAEQ -           1183   7.7e-36  123.2   0.0   2   2   2.8e-08   6.9e-05   22.3   0.0   155   190   373   409   363   409 0.89 RNA polymerase Rpb2, domain 2
RNA_pol_Rpb2_7       PF04560.15    82 sp|Q5HRL0|RPOB_STAEQ -           1183   1.1e-29  102.4   0.0   1   1   1.1e-32   2.8e-29  101.2   0.0     1    81  1071  1146  1071  1147 0.97 RNA polymerase Rpb2, domain 7
RNA_pol_Rpb2_3       PF04565.11    68 sp|Q5HRL0|RPOB_STAEQ -           1183   7.9e-29   99.2   0.0   1   1   6.8e-32   1.7e-28   98.1   0.0     1    68   468   537   468   537 0.99 RNA polymerase Rpb2, domain 3
RNA_pol_Rpb2_45      PF10385.4     66 sp|Q5HRL0|RPOB_STAEQ -           1183   1.6e-24   85.5   1.6   1   1   2.7e-27   6.7e-24   83.4   1.6     1    66   546   613   546   613 0.98 RNA polymerase beta subunit external 1 domain
RNA_pol_Rpb1_1       PF04997.7    337 sp|Q5HRK9|RPOC_STAEQ -           1207   2.1e-99  332.9   0.0   1   1  4.2e-102   8.9e-99  330.9   0.0     3   337     6   331     4   331 0.93 RNA polymerase Rpb1, domain 1
RNA_pol_Rpb1_5       PF04998.12   277 sp|Q5HRK9|RPOC_STAEQ -           1207   1.8e-75  253.7   1.1   1   1   1.6e-78   3.4e-75  252.8   1.1     1   276   774  1139   774  1140 0.95 RNA polymerase Rpb1, domain 5
RNA_pol_Rpb1_2       PF00623.15   166 sp|Q5HRK9|RPOC_STAEQ -           1207   1.2e-52  178.2   0.1   1   1   5.9e-55   1.3e-51  174.8   0.1     1   165   333   474   333   475 0.96 RNA polymerase Rpb1, domain 2
RNA_pol_Rpb1_3       PF04983.13   158 sp|Q5HRK9|RPOC_STAEQ -           1207     7e-34  116.8   0.3   1   2   1.6e-36   3.5e-33  114.5   0.1     1   158   478   667   478   667 0.95 RNA polymerase Rpb1, domain 3
RNA_pol_Rpb1_4       PF05000.12   108 sp|Q5HRK9|RPOC_STAEQ -           1207   4.1e-15   55.4   0.1   1   1   5.8e-18   1.2e-14   53.9   0.1     1    99   696   763   696   773 0.87 RNA polymerase Rpb1, domain 4
Peptidase_M23        PF01551.17    96 sp|Q5HRK9|RPOC_STAEQ -           1207     0.002   18.1   0.3   2   2     4e-05     0.084   12.9   0.1    10    69   968  1028   962  1046 0.88 Peptidase family M23
HARE-HTH             PF05066.8     72 sp|Q5HM94|RPOE_STAEQ -            178   1.8e-08   34.5   0.0   1   1   1.8e-12   2.7e-08   34.0   0.0     2    72    15    81    14    81 0.98 HB1, ASXL, restriction endonuclease HTH domain
RNA_pol_Rpb6         PF01192.17    57 sp|Q5HPY0|RPOZ_STAEQ -             70   3.7e-14   52.1   0.5   1   1   2.8e-18   4.2e-14   52.0   0.5     2    56     8    63     7    64 0.96 RNA polymerase Rpb6
RRF                  PF01765.14   165 sp|Q5HPT2|RRF_STAEQ  -            184   1.1e-66  223.3   8.5   1   1   9.4e-70   1.4e-66  223.0   8.5     2   165    19   182     3   182 0.99 Ribosome recycling factor
DUF883               PF05957.8     94 sp|Q5HPT2|RRF_STAEQ  -            184    0.0091   16.3   2.5   1   1   7.5e-06     0.011   16.0   1.0    13    71   111   169   101   174 0.88 Bacterial protein of unknown function (DUF883)
GCIP                 PF13324.1    275 sp|Q5HPT2|RRF_STAEQ  -            184     0.014   14.6   1.8   1   1   1.6e-05     0.024   13.8   1.8   183   246   109   175    98   176 0.82 Grap2 and cyclin-D-interacting
RRF_GI               PF12614.3    128 sp|Q5HPT2|RRF_STAEQ  -            184     0.018   14.8   1.5   1   1   1.3e-05     0.019   14.7   0.7     4    81    96   176    93   182 0.83 Ribosome recycling factor
LPP20                PF02169.11    92 sp|Q5HPT2|RRF_STAEQ  -            184     0.047   13.7   1.3   1   1   6.8e-05       0.1   12.7   1.3    21    73   121   171   107   181 0.89 LPP20 lipoprotein
SbcD_C               PF12320.3    100 sp|Q5HPT2|RRF_STAEQ  -            184      0.12   12.3   3.1   1   1   9.8e-05      0.15   12.1   1.4    11    83    72   149    49   164 0.77 Type 5 capsule protein repressor C-terminal domain
V-ATPase_G           PF03179.10   105 sp|Q5HPT2|RRF_STAEQ  -            184         1    9.6   7.4   1   1   0.00042      0.63   10.3   5.4    22    94   107   182   103   184 0.83 Vacuolar (H+)-ATPase G subunit
Ribosomal_S10        PF00338.17    97 sp|Q5HLZ8|RS10_STAEQ -            102   1.7e-38  130.3   0.1   1   1   3.8e-42   1.9e-38  130.2   0.1     1    97     6   102     6   102 0.99 Ribosomal protein S10p/S20e
Phi-29_GP3           PF05435.6    266 sp|Q5HLZ8|RS10_STAEQ -            102    0.0018   17.5   0.1   1   1   4.1e-07     0.002   17.3   0.1     6    74     7    72     1    79 0.80 Phi-29 DNA terminal protein GP3
DUF384               PF04064.8     58 sp|Q5HLZ8|RS10_STAEQ -            102     0.002   17.6   0.1   1   1   7.2e-07    0.0036   16.8   0.0    17    46    45    76    44    89 0.75 Domain of unknown function (DUF384)
Ribosomal_S11        PF00411.14   110 sp|Q5HM24|RS11_STAEQ -            129   1.6e-49  166.6   0.1   1   1   1.3e-53   1.9e-49  166.3   0.1     1   110    19   128    19   128 0.99 Ribosomal protein S11
Ribosom_S12_S23      PF00164.20   122 sp|Q5HRK7|RS12_STAEQ -            137   4.1e-48  161.8   4.1   1   1   4.9e-51   7.3e-47  157.8   4.1     1   122     2   136     2   136 0.86 Ribosomal protein S12/S23
Ribosomal_S13        PF00416.17   107 sp|Q5HM23|RS13_STAEQ -            121   9.4e-39  132.1   2.0   1   1   2.2e-42   1.1e-38  131.9   2.0     1   107     3   108     3   108 0.99 Ribosomal protein S13/S18
FbpA                 PF05833.6    455 sp|Q5HM23|RS13_STAEQ -            121    0.0041   15.7   0.0   1   1   9.3e-07    0.0046   15.5   0.0   187   234    13    59     5    80 0.89 Fibronectin-binding protein A N-terminus (FbpA)
HHH_6                PF14579.1     90 sp|Q5HM23|RS13_STAEQ -            121     0.013   15.5   0.0   1   1     5e-06     0.025   14.6   0.0    22    58    12    48     5    60 0.83 Helix-hairpin-helix motif
Ribosomal_S14        PF00253.16    55 sp|Q5HM12|RS14Z_STAEQ -             61     2e-25   87.8   5.0   1   1   1.5e-29   2.3e-25   87.7   5.0     4    55     9    60     6    60 0.95 Ribosomal protein S14p/S29e
Ribosomal_S14        PF00253.16    55 sp|Q5HPK6|RS14_STAEQ -             89     5e-27   93.0   0.6   1   1   5.4e-31     8e-27   92.3   0.6     2    55    35    88    34    88 0.98 Ribosomal protein S14p/S29e
Ribosomal_S15        PF00312.17    83 sp|Q5HPR8|RS15_STAEQ -             89   2.4e-29  100.9   4.0   1   1   1.8e-33   2.7e-29  100.7   4.0     2    83     7    88     6    88 0.98 Ribosomal protein S15
Ribosomal_S16        PF00886.14    62 sp|Q5HPV3|RS16_STAEQ -             91   1.3e-24   85.6   0.0   1   1   1.1e-28   1.7e-24   85.3   0.0     1    62     9    68     9    68 0.95 Ribosomal protein S16
Ribosomal_S17        PF00366.15    69 sp|Q5HM08|RS17_STAEQ -             87   9.6e-30  102.4   2.9   1   1   7.8e-34   1.2e-29  102.1   2.9     1    68    12    79    12    80 0.99 Ribosomal protein S17
Ribosomal_S18        PF01084.15    54 sp|Q5HRZ3|RS18_STAEQ -             80   6.3e-30  102.8   0.5   1   1   5.4e-34     8e-30  102.4   0.5     2    54    21    73    20    73 0.97 Ribosomal protein S18
Ribosomal_S19        PF00203.16    81 sp|Q5HM03|RS19_STAEQ -             92     3e-38  129.2   0.2   1   1   4.7e-42   3.5e-38  129.0   0.2     1    81     3    83     3    83 0.99 Ribosomal protein S19
Toxin_46             PF15526.1     74 sp|Q5HM03|RS19_STAEQ -             92     0.042   14.0   0.1   1   1   8.6e-06     0.064   13.4   0.0    19    61    47    91    36    92 0.78 Putative toxin 46
S1                   PF00575.18    74 sp|Q5HP69|RS1_STAEQ  -            392   1.9e-76  252.1  33.2   1   4   3.1e-19   5.1e-16   58.5   4.0     3    67    14    79    12    85 0.96 S1 RNA binding domain
S1                   PF00575.18    74 sp|Q5HP69|RS1_STAEQ  -            392   1.9e-76  252.1  33.2   2   4   9.4e-17   1.5e-13   50.5   2.3     5    74   108   173   104   173 0.96 S1 RNA binding domain
S1                   PF00575.18    74 sp|Q5HP69|RS1_STAEQ  -            392   1.9e-76  252.1  33.2   3   4   1.3e-26   2.2e-23   82.1   3.5     2    74   191   262   190   262 0.98 S1 RNA binding domain
S1                   PF00575.18    74 sp|Q5HP69|RS1_STAEQ  -            392   1.9e-76  252.1  33.2   4   4   1.7e-25   2.8e-22   78.5   0.9     1    74   275   348   275   348 0.98 S1 RNA binding domain
DUF2110              PF09883.4    225 sp|Q5HP69|RS1_STAEQ  -            392    0.0033   17.0   9.8   1   4   0.00031      0.51    9.9   2.9    60   178     2   120     1   139 0.84 Uncharacterized protein conserved in archaea (DUF2110)
DUF2110              PF09883.4    225 sp|Q5HP69|RS1_STAEQ  -            392    0.0033   17.0   9.8   3   4   0.00038      0.63    9.6   0.2    70   119   188   238   171   265 0.78 Uncharacterized protein conserved in archaea (DUF2110)
CusF_Ec              PF11604.3     70 sp|Q5HP69|RS1_STAEQ  -            392     0.007   16.1   5.9   1   2   0.00012       0.2   11.5   0.2    37    66     7    35     1    38 0.83 Copper binding periplasmic protein CusF
YihI                 PF04220.7    169 sp|Q5HP69|RS1_STAEQ  -            392     0.081   12.2   1.9   2   2   0.00051      0.84    8.9   0.1    93   124   167   198   151   203 0.82 Der GTPase activator (YihI)
Ribosomal_S20p       PF01649.13    84 sp|Q5HNW1|RS20_STAEQ -             83   6.2e-17   61.7  14.3   1   1   4.5e-21   6.7e-17   61.6  14.3     1    80     2    80     2    83 0.95 Ribosomal protein S20
Ribosomal_S21        PF01165.15    57 sp|Q5HNX1|RS21_STAEQ -             58   2.8e-23   81.1  12.1   1   1     2e-27     3e-23   81.0  12.1     4    57     5    58     2    58 0.97 Ribosomal protein S21
Ribosomal_S2         PF00318.15   211 sp|Q5HPT5|RS2_STAEQ  -            262   1.6e-90  301.9   0.1   1   1   3.8e-94   1.9e-90  301.7   0.1     1   211     9   225     9   225 0.99 Ribosomal protein S2
Ribosomal_S3_C       PF00189.15    85 sp|Q5HM05|RS3_STAEQ  -            217   1.9e-31  108.1   0.4   1   1   1.3e-34   3.9e-31  107.1   0.1     1    85   118   201   118   201 0.97 Ribosomal protein S3, C-terminal domain
KH_2                 PF07650.12    78 sp|Q5HM05|RS3_STAEQ  -            217   1.4e-21   75.8   6.9   1   1   9.1e-25   2.7e-21   74.9   6.9     1    75    37   107    37   110 0.98 KH domain
KH_4                 PF13083.1     73 sp|Q5HM05|RS3_STAEQ  -            217   0.00018   21.0   0.8   1   1   1.3e-07   0.00039   20.0   0.6     8    55    42    87    35   105 0.74 KH domain
KH_1                 PF00013.24    60 sp|Q5HM05|RS3_STAEQ  -            217    0.0018   17.8   1.9   1   1   1.6e-06    0.0047   16.5   1.9     3    31    64    92    62   117 0.90 KH domain
KH_5                 PF13184.1     69 sp|Q5HM05|RS3_STAEQ  -            217    0.0075   16.0   4.9   2   2   1.3e-05     0.039   13.7   1.2     3    44    61   100    59   120 0.83 NusA-like KH domain
Ribosomal_S4         PF00163.14    94 sp|Q5HNI5|RS4_STAEQ  -            200   4.1e-24   84.7   0.6   1   1     1e-27   7.7e-24   83.9   0.6     1    93     2    90     2    91 0.97 Ribosomal protein S4/S9 N-terminal domain
S4                   PF01479.20    48 sp|Q5HNI5|RS4_STAEQ  -            200   1.1e-19   69.5   0.2   1   1   2.4e-23   1.8e-19   68.8   0.2     2    48    93   139    92   139 0.98 S4 domain
Ribosomal_S5_C       PF03719.10    74 sp|Q5HM16|RS5_STAEQ  -            166   4.6e-33  112.3   0.3   1   1   1.1e-36     8e-33  111.5   0.3     1    74    85   158    85   158 0.99 Ribosomal protein S5, C-terminal domain
Ribosomal_S5         PF00333.15    67 sp|Q5HM16|RS5_STAEQ  -            166   2.3e-31  107.3   5.2   1   1   4.9e-35   3.6e-31  106.6   5.2     1    67    10    76    10    76 0.98 Ribosomal protein S5, N-terminal domain
Ribosomal_S6         PF01250.12    92 sp|Q5HRZ5|RS6_STAEQ  -             98     3e-30  103.9   1.8   1   1   4.5e-34   3.3e-30  103.7   1.8     1    91     2    93     2    94 0.97 Ribosomal protein S6
EDR1                 PF14381.1    205 sp|Q5HRZ5|RS6_STAEQ  -             98     0.069   12.7   0.0   1   1   1.1e-05     0.081   12.4   0.0     4    50    35    83    32    97 0.72 Ethylene-responsive protein kinase Le-CTR1
Ribosomal_S7         PF00177.16   148 sp|Q5HRK6|RS7_STAEQ  -            156   2.3e-62  208.9   0.1   1   1   1.7e-66   2.5e-62  208.8   0.1     1   148     1   149     1   149 1.00 Ribosomal protein S7p/S5e
Ribosomal_S8         PF00410.14   129 sp|Q5HM13|RS8_STAEQ  -            132   1.7e-50  170.1   0.2   1   1   2.6e-54   1.9e-50  170.0   0.2     1   129     5   132     5   132 0.98 Ribosomal protein S8
DUF2258              PF10015.4     75 sp|Q5HM13|RS8_STAEQ  -            132    0.0095   15.7   0.4   1   1     2e-06     0.015   15.1   0.4    13    72     8    72     4    75 0.89 Uncharacterized protein conserved in archaea (DUF2258)
Ribosomal_S9         PF00380.14   121 sp|Q5HM32|RS9_STAEQ  -            130   1.4e-46  157.6   0.0   1   1   1.1e-50   1.6e-46  157.4   0.0     1   121    10   130    10   130 1.00 Ribosomal protein S9/S16
STAS_2               PF13466.1     80 sp|Q5HME9|RSBV_STAEQ -            108   7.4e-14   51.5   0.0   1   1   1.2e-17   8.7e-14   51.3   0.0     1    79    16    95    16    96 0.97 STAS domain
STAS                 PF01740.16   117 sp|Q5HME9|RSBV_STAEQ -            108   9.6e-13   47.5   0.0   1   1   1.5e-16   1.1e-12   47.3   0.0     2   105     5    99     4   106 0.94 STAS domain
HATPase_c_2          PF13581.1    125 sp|Q5HMF0|RSBW_STAEQ -            159   1.3e-27   96.0   0.0   1   1   2.1e-31   1.6e-27   95.8   0.0     1   125    12   142    12   142 0.92 Histidine kinase-like ATPase domain
HATPase_c            PF02518.21   111 sp|Q5HMF0|RSBW_STAEQ -            159     8e-08   31.9   0.1   1   1   1.4e-11     1e-07   31.6   0.1     2    90    39   130    38   154 0.89 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
DUF258               PF03193.11   161 sp|Q5HPX0|RSGA_STAEQ -            291     2e-51  173.3   0.1   1   1   2.9e-54   2.6e-51  173.0   0.1     3   160   127   281   125   282 0.93 Protein of unknown function, DUF258
MMR_HSR1             PF01926.18   116 sp|Q5HPX0|RSGA_STAEQ -            291   3.7e-05   23.6   0.0   1   1   8.7e-08   7.6e-05   22.6   0.0     2    60   160   221   159   289 0.60 50S ribosome-binding GTPase
AAA_22               PF13401.1    131 sp|Q5HPX0|RSGA_STAEQ -            291    0.0008   19.5   0.0   1   1   1.6e-06    0.0014   18.7   0.0     3    32   156   185   152   248 0.83 AAA domain
AAA_29               PF13555.1     62 sp|Q5HPX0|RSGA_STAEQ -            291    0.0029   17.0   0.0   1   1   6.7e-06    0.0058   16.1   0.0    25    44   159   178   147   188 0.84 P-loop containing region of AAA domain
AAA_17               PF13207.1    121 sp|Q5HPX0|RSGA_STAEQ -            291    0.0052   17.6   0.1   1   1   1.8e-05     0.016   16.0   0.0     2    40   160   197   159   284 0.56 AAA domain
ABC_tran             PF00005.22   137 sp|Q5HPX0|RSGA_STAEQ -            291    0.0076   16.5   0.3   1   1   3.1e-05     0.027   14.7   0.1    13    67   159   215   149   286 0.66 ABC transporter
Septin               PF00735.13   281 sp|Q5HPX0|RSGA_STAEQ -            291     0.012   14.6   0.6   2   2   7.3e-05     0.064   12.2   0.0     7    43   160   195   157   225 0.69 Septin
AAA_18               PF13238.1    129 sp|Q5HPX0|RSGA_STAEQ -            291      0.02   15.1   0.0   1   1   5.9e-05     0.052   13.8   0.0     1    58   160   241   160   277 0.78 AAA domain
AAA_16               PF13191.1    185 sp|Q5HPX0|RSGA_STAEQ -            291     0.034   14.1   0.0   1   1   6.1e-05     0.053   13.5   0.0    25    51   158   184   145   211 0.81 AAA ATPase domain
FtsK_SpoIIIE         PF01580.13   205 sp|Q5HPX0|RSGA_STAEQ -            291     0.045   13.2   0.0   2   2   0.00046       0.4   10.1   0.0    24    57   141   176   126   177 0.81 FtsK/SpoIIIE family
RNA_helicase         PF00910.17   107 sp|Q5HPX0|RSGA_STAEQ -            291     0.046   13.8   0.0   1   1   0.00011     0.092   12.9   0.0     1    50   160   208   160   237 0.78 RNA helicase
PRK                  PF00485.13   194 sp|Q5HPX0|RSGA_STAEQ -            291     0.049   13.1   0.0   1   1   9.1e-05     0.079   12.5   0.0     1    96   159   256   159   271 0.72 Phosphoribulokinase / Uridine kinase family
Miro                 PF08477.8    119 sp|Q5HPX0|RSGA_STAEQ -            291     0.051   14.0   0.0   1   1   0.00014      0.13   12.8   0.0     2    37   160   200   159   247 0.56 Miro-like protein
AAA_33               PF13671.1    143 sp|Q5HPX0|RSGA_STAEQ -            291     0.072   12.9   0.0   1   1   0.00014      0.13   12.1   0.0     1    39   159   194   159   262 0.62 AAA domain
AAA_23               PF13476.1    202 sp|Q5HPX0|RSGA_STAEQ -            291     0.078   13.2   3.3   1   1   0.00011     0.095   13.0   1.5    18    38   156   176   140   289 0.82 AAA domain
NACHT                PF05729.7    166 sp|Q5HPX0|RSGA_STAEQ -            291      0.13   11.8   0.1   1   1   0.00036      0.31   10.6   0.0     2    21   159   178   158   190 0.83 NACHT domain
RrnaAD               PF00398.15   262 sp|Q5HRR2|RSMA_STAEQ -            296   2.9e-64  216.6   0.4   1   1   2.4e-67   3.3e-64  216.4   0.4     2   259    21   287    20   290 0.94 Ribosomal RNA adenine dimethylase
Methyltransf_18      PF12847.2    112 sp|Q5HRR2|RSMA_STAEQ -            296   5.2e-05   23.7   0.0   1   2   5.8e-07   0.00079   19.9   0.0     5    73    53   115    50   150 0.84 Methyltransferase domain
Methyltransf_31      PF13847.1    152 sp|Q5HRR2|RSMA_STAEQ -            296   0.00013   21.6   0.3   1   1   1.9e-07   0.00026   20.6   0.3     7    77    53   125    48   266 0.70 Methyltransferase domain
Methyltransf_26      PF13659.1    117 sp|Q5HRR2|RSMA_STAEQ -            296    0.0045   17.0   0.0   1   1   7.6e-06      0.01   15.8   0.0     4    81    53   132    50   157 0.83 Methyltransferase domain
Methyltransf_12      PF08242.7     99 sp|Q5HRR2|RSMA_STAEQ -            296    0.0061   17.0   0.2   1   2   0.00012      0.16   12.4   0.0     2    68    55   114    54   129 0.89 Methyltransferase domain
NodS                 PF05401.6    201 sp|Q5HRR2|RSMA_STAEQ -            296    0.0079   15.6   0.1   1   1   9.1e-06     0.012   14.9   0.1    45   120    51   134    36   157 0.82 Nodulation protein S (NodS)
Ribonuc_P_40         PF08584.6    284 sp|Q5HRR2|RSMA_STAEQ -            296     0.014   14.4   0.0   1   1   1.7e-05     0.023   13.7   0.0   186   276   161   255   151   260 0.86 Ribonuclease P 40kDa (Rpp40) subunit
Methyltransf_25      PF13649.1    101 sp|Q5HRR2|RSMA_STAEQ -            296     0.017   15.4   0.0   1   1   2.4e-05     0.033   14.5   0.0     1    91    53   143    53   145 0.81 Methyltransferase domain
MTS                  PF05175.9    170 sp|Q5HRR2|RSMA_STAEQ -            296     0.018   14.3   0.1   1   1   2.4e-05     0.033   13.5   0.1    32    95    50   114    37   190 0.77 Methyltransferase small domain
Methyltransf_4       PF02390.12   197 sp|Q5HRR2|RSMA_STAEQ -            296     0.024   13.6   0.1   1   1   3.5e-05     0.047   12.7   0.1    22    77    52   103    29   131 0.63 Putative methyltransferase
Methyltransf_23      PF13489.1    161 sp|Q5HRR2|RSMA_STAEQ -            296      0.15   11.7   0.0   1   1    0.0003      0.41   10.3   0.0    26    59    53    86    10   147 0.86 Methyltransferase domain
GidB                 PF02527.10   184 sp|Q5HS34|RSMG_STAEQ -            239   5.8e-57  191.7   0.0   1   1   3.3e-60   6.9e-57  191.5   0.0     1   178    21   202    21   212 0.95 rRNA small subunit methyltransferase G
Methyltransf_31      PF13847.1    152 sp|Q5HS34|RSMG_STAEQ -            239   1.4e-12   47.4   0.0   1   1     1e-15   2.2e-12   46.8   0.0     3   126    69   182    67   225 0.80 Methyltransferase domain
Methyltransf_18      PF12847.2    112 sp|Q5HS34|RSMG_STAEQ -            239   0.00075   20.0   0.0   1   1   1.9e-06     0.004   17.7   0.0     4   108    72   169    70   173 0.79 Methyltransferase domain
MTS                  PF05175.9    170 sp|Q5HS34|RSMG_STAEQ -            239     0.002   17.5   0.0   1   1   1.5e-06    0.0031   16.8   0.0    34    88    72   126    57   145 0.84 Methyltransferase small domain
Methyltransf_32      PF13679.1    141 sp|Q5HS34|RSMG_STAEQ -            239     0.029   14.0   0.0   2   2   7.6e-05      0.16   11.6   0.0    21    89    65   126    48   146 0.78 Methyltransferase domain
Methyltransf_12      PF08242.7     99 sp|Q5HS34|RSMG_STAEQ -            239     0.057   13.9   0.0   1   1   5.9e-05      0.13   12.7   0.0     2    75    75   148    74   167 0.87 Methyltransferase domain
Tenui_NS4            PF03300.8    283 sp|Q5HS34|RSMG_STAEQ -            239     0.089   11.8   0.0   1   1   6.2e-05      0.13   11.3   0.0    40    95   100   156    93   168 0.84 Tenuivirus non-structural protein NS4
Methyltransf_5       PF01795.14   310 sp|Q5HQ13|RSMH_STAEQ -            311  1.2e-130  435.3   0.1   1   1  1.2e-133  1.3e-130  435.2   0.1     2   308     2   308     1   310 0.99 MraW methylase family
Methyltransf_31      PF13847.1    152 sp|Q5HQ13|RSMH_STAEQ -            311   2.3e-08   33.7   0.0   1   2   3.2e-09   3.4e-06   26.7   0.0    13    77    31    97    19   139 0.86 Methyltransferase domain
Ubie_methyltran      PF01209.13   233 sp|Q5HQ13|RSMH_STAEQ -            311    0.0017   17.5   0.0   1   2   0.00048      0.51    9.4   0.0    39   112    12    84     3    98 0.86 ubiE/COQ5 methyltransferase family
MTS                  PF05175.9    170 sp|Q5HQ13|RSMH_STAEQ -            311    0.0025   17.2   0.1   1   2   3.8e-05     0.041   13.2   0.0    41    92    31    81     6    98 0.78 Methyltransferase small domain
Methyltransf_25      PF13649.1    101 sp|Q5HQ13|RSMH_STAEQ -            311    0.0036   17.6   0.1   1   1   1.3e-05     0.014   15.7   0.0     7    63    31    84    25   122 0.82 Methyltransferase domain
DDE_Tnp_1_7          PF13843.1    351 sp|Q5HQ13|RSMH_STAEQ -            311    0.0054   15.8   0.0   1   1   7.8e-06    0.0082   15.2   0.0   195   251    33    88    19   106 0.87 Transposase IS4
Methyltransf_18      PF12847.2    112 sp|Q5HQ13|RSMH_STAEQ -            311    0.0086   16.6   0.1   1   1   4.6e-05     0.049   14.2   0.0    11    73    31   101    26   137 0.76 Methyltransferase domain
Methyltransf_24      PF13578.1    106 sp|Q5HQ13|RSMH_STAEQ -            311     0.014   16.2   0.0   1   1   3.5e-05     0.037   14.8   0.0    11    79    35   103    28   110 0.74 Methyltransferase domain
Methyltransf_26      PF13659.1    117 sp|Q5HQ13|RSMH_STAEQ -            311     0.016   15.2   0.0   1   1   3.9e-05     0.041   13.9   0.0    10    68    31    88    21   243 0.71 Methyltransferase domain
GCD14                PF08704.5    247 sp|Q5HQ13|RSMH_STAEQ -            311     0.052   13.0   0.0   1   1   0.00013      0.14   11.6   0.0    34   129    14   111     5   123 0.86 tRNA methyltransferase complex GCD14 subunit
Methyltransf_12      PF08242.7     99 sp|Q5HQ13|RSMH_STAEQ -            311     0.082   13.3   0.1   1   2    0.0008      0.84   10.1   0.0     5    65    30    92    29   111 0.67 Methyltransferase domain
Methyltransf_11      PF08241.7     95 sp|Q5HQ13|RSMH_STAEQ -            311      0.12   12.8   0.0   1   1   0.00028      0.29   11.6   0.0     6    54    30    82    25    99 0.78 Methyltransferase domain
CRS1_YhbY            PF01985.16    84 sp|Q5HQ13|RSMH_STAEQ -            311      0.17   11.9   1.1   2   2   0.00094      0.99    9.4   0.0    34    74   137   177   128   190 0.79 CRS1 / YhbY (CRM) domain
RuvA_N               PF01330.16    61 sp|Q5HNQ9|RUVA_STAEQ -            200   2.6e-22   78.3   1.5   1   1   3.7e-25     6e-22   77.1   0.3     1    61     1    61     1    61 1.00 RuvA N terminal domain
HHH_5                PF14520.1     60 sp|Q5HNQ9|RUVA_STAEQ -            200   4.4e-08   33.1   0.1   1   1   1.1e-10   1.9e-07   31.1   0.0     2    59    69   128    68   129 0.88 Helix-hairpin-helix domain
RuvA_C               PF07499.8     47 sp|Q5HNQ9|RUVA_STAEQ -            200   2.8e-07   30.5   0.2   1   1   3.2e-10   5.2e-07   29.7   0.2     3    46   155   198   153   199 0.93 RuvA, C-terminal domain
HHH                  PF00633.18    30 sp|Q5HNQ9|RUVA_STAEQ -            200   1.8e-06   27.2   0.6   1   2   9.9e-05      0.16   11.7   0.2    13    29    74    90    73    91 0.91 Helix-hairpin-helix motif
HHH                  PF00633.18    30 sp|Q5HNQ9|RUVA_STAEQ -            200   1.8e-06   27.2   0.6   2   2   6.3e-05       0.1   12.3   0.0    17    28   113   124   109   125 0.88 Helix-hairpin-helix motif
HHH_8                PF14716.1     68 sp|Q5HNQ9|RUVA_STAEQ -            200    0.0029   17.7   0.1   2   2   4.7e-05     0.077   13.1   0.0    41    63    96   123    83   125 0.70 Helix-hairpin-helix domain
IMS_HHH              PF11798.3     32 sp|Q5HNQ9|RUVA_STAEQ -            200    0.0033   17.3   0.3   2   2   0.00018       0.3   11.2   0.0    13    26   109   122   108   125 0.88 IMS family HHH motif
RuvB_N               PF05496.7    234 sp|Q5HNR0|RUVB_STAEQ -            334  1.1e-114  381.3   0.0   1   1  3.1e-117  1.4e-114  380.9   0.0     1   233     4   236     4   237 0.99 Holliday junction DNA helicase ruvB N-terminus
RuvB_C               PF05491.8     76 sp|Q5HNR0|RUVB_STAEQ -            334   8.2e-34  115.0   0.0   1   1   3.8e-36   1.7e-33  114.0   0.0     1    75   254   328   254   329 0.98 Holliday junction DNA helicase ruvB C-terminus
AAA                  PF00004.24   132 sp|Q5HNR0|RUVB_STAEQ -            334   6.2e-19   68.5   0.0   1   1   1.1e-20   5.3e-18   65.4   0.0     1   131    56   180    56   181 0.93 ATPase family associated with various cellular activities (AAA)
AAA_5                PF07728.9    139 sp|Q5HNR0|RUVB_STAEQ -            334   3.4e-07   30.0   0.0   1   1   3.2e-08   1.5e-05   24.7   0.0     1   139    55   173    55   173 0.79 AAA domain (dynein-related subfamily)
DUF815               PF05673.8    250 sp|Q5HNR0|RUVB_STAEQ -            334   2.7e-05   23.2   0.1   1   2   0.00024      0.11   11.4   0.0    25   115    24   112    11   117 0.73 Protein of unknown function (DUF815)
DUF815               PF05673.8    250 sp|Q5HNR0|RUVB_STAEQ -            334   2.7e-05   23.2   0.1   2   2    0.0011       0.5    9.2   0.0   182   241   169   223   166   232 0.80 Protein of unknown function (DUF815)
AAA_22               PF13401.1    131 sp|Q5HNR0|RUVB_STAEQ -            334     4e-05   23.7   0.0   1   2   5.2e-05     0.024   14.7   0.0     6    30    55    79    50   102 0.81 AAA domain
Mg_chelatase         PF01078.16   207 sp|Q5HNR0|RUVB_STAEQ -            334   0.00013   21.2   0.1   1   3   0.00032      0.15   11.2   0.0    22    42    53    73    25    79 0.64 Magnesium chelatase, subunit ChlI
Bac_DnaA             PF00308.13   219 sp|Q5HNR0|RUVB_STAEQ -            334    0.0003   20.5   0.1   1   2    0.0005      0.23   11.0   0.0    15    61    34    80    25    85 0.79 Bacterial dnaA  protein
AAA_17               PF13207.1    121 sp|Q5HNR0|RUVB_STAEQ -            334   0.00038   21.2   0.2   1   1   3.4e-06    0.0016   19.2   0.1     2    32    56    83    55   230 0.66 AAA domain
AAA_14               PF13173.1    128 sp|Q5HNR0|RUVB_STAEQ -            334   0.00055   19.8   0.0   1   1   3.1e-06    0.0014   18.4   0.0     5    83    56   126    54   141 0.66 AAA domain
TIP49                PF06068.8    398 sp|Q5HNR0|RUVB_STAEQ -            334   0.00082   18.1   0.4   1   2   0.00067      0.31    9.7   0.0    25    78    28    81    11    88 0.86 TIP49 C-terminus
AAA_3                PF07726.6    131 sp|Q5HNR0|RUVB_STAEQ -            334    0.0012   18.4   0.0   1   1     4e-05     0.018   14.6   0.0     1    31    55    85    55   139 0.88 ATPase family associated with various cellular activities (AAA)
RNA_helicase         PF00910.17   107 sp|Q5HNR0|RUVB_STAEQ -            334    0.0016   18.5   0.0   1   1   1.2e-05    0.0057   16.8   0.0     1    62    56   117    56   136 0.84 RNA helicase
DUF258               PF03193.11   161 sp|Q5HNR0|RUVB_STAEQ -            334    0.0056   15.8   0.0   1   1   2.2e-05      0.01   15.0   0.0    36    68    54    86    24    90 0.83 Protein of unknown function, DUF258
AAA_18               PF13238.1    129 sp|Q5HNR0|RUVB_STAEQ -            334    0.0067   16.7   0.2   1   1   6.1e-05     0.028   14.7   0.0     1    27    56    82    56   126 0.87 AAA domain
AAA_19               PF13245.1     76 sp|Q5HNR0|RUVB_STAEQ -            334    0.0079   15.9   0.0   1   1   4.4e-05      0.02   14.6   0.0     5    33    44    75    40   115 0.86 Part of AAA domain
AAA_10               PF12846.2    304 sp|Q5HNR0|RUVB_STAEQ -            334    0.0084   15.5   0.0   1   2    0.0003      0.14   11.5   0.0     3    24    55    76    54    83 0.90 AAA-like domain
Sigma54_activ_2      PF14532.1    138 sp|Q5HNR0|RUVB_STAEQ -            334     0.009   16.0   0.0   1   1   3.3e-05     0.015   15.3   0.0     2    93    31   128    30   149 0.69 Sigma-54 interaction domain
AAA_16               PF13191.1    185 sp|Q5HNR0|RUVB_STAEQ -            334     0.012   15.6   0.4   1   1   0.00051      0.24   11.3   0.0    22    43    50    72    34    87 0.78 AAA ATPase domain
Zeta_toxin           PF06414.7    201 sp|Q5HNR0|RUVB_STAEQ -            334     0.018   14.1   0.0   1   1   7.1e-05     0.033   13.2   0.0    17    50    54    86    41    91 0.83 Zeta toxin
Resolvase            PF00239.16   141 sp|Q5HNR0|RUVB_STAEQ -            334     0.019   14.8   0.0   1   1   0.00016     0.075   12.9   0.0    37    79    82   124    66   130 0.82 Resolvase, N terminal domain
T2SE                 PF00437.15   272 sp|Q5HNR0|RUVB_STAEQ -            334     0.021   13.7   0.0   1   1   0.00011      0.05   12.4   0.0   102   155    24    80    18    87 0.81 Type II/IV secretion system protein
NB-ARC               PF00931.17   287 sp|Q5HNR0|RUVB_STAEQ -            334     0.028   13.2   0.0   1   1   0.00011     0.052   12.4   0.0    17    46    51    80    36    82 0.83 NB-ARC domain
ABC_tran             PF00005.22   137 sp|Q5HNR0|RUVB_STAEQ -            334      0.03   14.6   0.0   1   1   0.00013      0.06   13.6   0.0     9    36    51    78    43    94 0.83 ABC transporter
NTPase_1             PF03266.10   168 sp|Q5HNR0|RUVB_STAEQ -            334     0.033   13.9   0.1   1   1   0.00042       0.2   11.3   0.0     1    31    55    85    55    91 0.84 NTPase
AAA_24               PF13479.1    213 sp|Q5HNR0|RUVB_STAEQ -            334     0.044   13.3   0.1   1   1   0.00039      0.18   11.3   0.1     6    20    56    70    55   124 0.95 AAA domain
Rad17                PF03215.10   519 sp|Q5HNR0|RUVB_STAEQ -            334     0.062   11.9   0.0   1   1   0.00019     0.086   11.5   0.0    30    80    38    88    22    97 0.85 Rad17 cell cycle checkpoint protein
AAA_33               PF13671.1    143 sp|Q5HNR0|RUVB_STAEQ -            334     0.063   13.1   0.0   1   1   0.00048      0.22   11.3   0.0     2    23    56    77    56    95 0.83 AAA domain
Arch_ATPase          PF01637.13   234 sp|Q5HNR0|RUVB_STAEQ -            334     0.076   12.6   0.0   1   1   0.00068      0.31   10.6   0.0    16    46    49    78    43    90 0.84 Archaeal ATPase
ATP-synt_ab          PF00006.20   215 sp|Q5HNR0|RUVB_STAEQ -            334     0.079   12.4   0.0   1   1   0.00024      0.11   11.9   0.0    18    86    56   333    54   334 0.91 ATP synthase alpha/beta family, nucleotide-binding domain
AAA_28               PF13521.1    163 sp|Q5HNR0|RUVB_STAEQ -            334     0.085   12.8   0.1   1   1   0.00049      0.23   11.4   0.0     2    23    56    80    55    90 0.81 AAA domain
UPF0081              PF03652.10   135 sp|Q5HNT4|RUVX_STAEQ -            142   2.1e-41  141.1   0.1   1   1   1.6e-45   2.4e-41  141.0   0.1     2   135     5   140     4   140 0.96 Uncharacterised protein family (UPF0081)
MarR                 PF01047.17    59 sp|Q5HLK8|SARZ_STAEQ -            148   5.3e-13   48.4   0.1   1   1   7.6e-16   1.1e-12   47.4   0.1     1    58    36    93    36    94 0.97 MarR family
MarR_2               PF12802.2     62 sp|Q5HLK8|SARZ_STAEQ -            148     8e-08   31.8   0.0   1   1   9.1e-11   1.3e-07   31.1   0.0     1    61    34    92    34    93 0.97 MarR family
HTH_27               PF13463.1     68 sp|Q5HLK8|SARZ_STAEQ -            148   2.5e-07   30.9   0.2   1   1   3.7e-10   5.5e-07   29.8   0.2     1    68    36   102    36   102 0.96 Winged helix DNA-binding domain
HTH_34               PF13601.1     80 sp|Q5HLK8|SARZ_STAEQ -            148   3.6e-05   23.7   0.1   1   1   4.9e-08   7.3e-05   22.7   0.1     5    67    43   104    41   114 0.90 Winged helix DNA-binding domain
HxlR                 PF01638.12    91 sp|Q5HLK8|SARZ_STAEQ -            148   0.00013   21.4   0.4   1   1   1.8e-07   0.00027   20.5   0.3    32    81    65   114    37   126 0.84 HxlR-like helix-turn-helix
HTH_24               PF13412.1     48 sp|Q5HLK8|SARZ_STAEQ -            148   0.00014   21.1   0.0   1   1   2.2e-07   0.00032   20.0   0.0     9    47    44    82    43    83 0.96 Winged helix-turn-helix DNA-binding
PadR                 PF03551.9     75 sp|Q5HLK8|SARZ_STAEQ -            148    0.0018   18.0   1.1   1   1   1.9e-06    0.0029   17.3   0.3    27    71    62   104    43   107 0.79 Transcriptional regulator PadR-like family
TrmB                 PF01978.14    68 sp|Q5HLK8|SARZ_STAEQ -            148     0.029   14.0   0.6   1   1     4e-05     0.059   13.0   0.6     1    58    31    88    31    96 0.93 Sugar-specific transcriptional regulator TrmB
ATP-sulfurylase      PF01747.12   215 sp|Q5HL01|SAT_STAEQ  -            392  2.1e-100  334.4   0.0   1   1  5.8e-104  2.8e-100  334.0   0.0     1   213   176   387   176   389 0.99 ATP-sulfurylase
PUA_2                PF14306.1    160 sp|Q5HL01|SAT_STAEQ  -            392   1.3e-58  196.8   0.0   1   1     4e-62     2e-58  196.3   0.0     1   160    12   170    12   170 0.99 PUA-like domain
AAA_23               PF13476.1    202 sp|Q5HPJ3|SBCC_STAEQ -           1009   3.8e-25   89.4  15.1   1   1   2.3e-28   3.8e-25   89.4  15.1     2   201     6   212     5   219 0.70 AAA domain
SbcCD_C              PF13558.1     90 sp|Q5HPJ3|SBCC_STAEQ -           1009   2.5e-14   52.9   0.2   1   1   4.1e-17   6.8e-14   51.5   0.2    23    88   906   966   892   968 0.89 Putative exonuclease SbcCD, C subunit
AAA_29               PF13555.1     62 sp|Q5HPJ3|SBCC_STAEQ -           1009   1.1e-06   28.1   0.0   1   1   1.6e-09   2.6e-06   26.8   0.0     8    54    10    58     5    63 0.77 P-loop containing region of AAA domain
SMC_N                PF02463.14   220 sp|Q5HPJ3|SBCC_STAEQ -           1009   0.00038   19.7   0.3   1   1   2.3e-07   0.00038   19.7   0.3     4   105     5   104     4   131 0.66 RecF/RecN/SMC N terminal domain
T2SE                 PF00437.15   272 sp|Q5HPJ3|SBCC_STAEQ -           1009    0.0022   16.9   0.0   1   1   3.8e-06    0.0063   15.4   0.0   124   150    23    49     7    57 0.84 Type II/IV secretion system protein
ABC_tran             PF00005.22   137 sp|Q5HPJ3|SBCC_STAEQ -           1009     0.022   15.0   0.0   1   1   1.3e-05     0.022   15.0   0.0     8   121    24   139    19   151 0.83 ABC transporter
FtsK_SpoIIIE         PF01580.13   205 sp|Q5HPJ3|SBCC_STAEQ -           1009     0.036   13.5   0.0   1   1   9.3e-05      0.15   11.4   0.0    32    67    18    56     5    60 0.76 FtsK/SpoIIIE family
AAA_19               PF13245.1     76 sp|Q5HPJ3|SBCC_STAEQ -           1009     0.065   12.9   0.0   1   1   7.8e-05      0.13   12.0   0.0    10    36    27    52    22    70 0.82 Part of AAA domain
TerY-C               PF15616.1    132 sp|Q5HPJ3|SBCC_STAEQ -           1009      0.14   12.0   0.1   1   1   8.5e-05      0.14   12.0   0.1    48    89   486   526   420   529 0.81 TerY-C metal binding domain
Metallophos          PF00149.23   200 sp|Q5HPJ4|SBCD_STAEQ -            374   2.1e-15   56.6   2.6   1   1   1.6e-18   4.7e-15   55.5   2.6     1   163     1   178     1   214 0.70 Calcineurin-like phosphoesterase
Metallophos_2        PF12850.2    156 sp|Q5HPJ4|SBCD_STAEQ -            374     5e-12   45.9   0.0   1   1   4.4e-15   1.3e-11   44.5   0.0     1   155     1   249     1   250 0.65 Calcineurin-like phosphoesterase superfamily domain
SbcD_C               PF12320.3    100 sp|Q5HPJ4|SBCD_STAEQ -            374     5e-10   39.3   0.1   1   1   4.9e-13   1.4e-09   37.8   0.1     2    99   262   351   261   352 0.94 Type 5 capsule protein repressor C-terminal domain
Epimerase_2          PF02350.14   346 sp|Q5HPJ4|SBCD_STAEQ -            374    0.0086   14.8   0.0   1   1   6.1e-06     0.018   13.8   0.0    34    80     3    52     1    60 0.81 UDP-N-acetylglucosamine 2-epimerase
Hemerythrin          PF01814.18   133 sp|Q5HR69|SCDA_STAEQ -            224     3e-21   75.9   0.8   1   1   1.5e-24   3.8e-21   75.6   0.8     7   132    84   222    78   223 0.97 Hemerythrin HHE cation binding domain
ScdA_N               PF04405.9     56 sp|Q5HR69|SCDA_STAEQ -            224   1.5e-19   69.1   0.1   1   1   1.3e-22   3.2e-19   68.0   0.1     2    55     5    59     4    60 0.95 Domain of Unknown function (DUF542)
DUF1858              PF08984.6     59 sp|Q5HR69|SCDA_STAEQ -            224    0.0098   15.5   0.0   1   1   9.6e-06     0.024   14.3   0.0     1    25     2    26     2    31 0.91 Domain of unknown function (DUF1858)
DUF1910              PF08928.5    117 sp|Q5HR69|SCDA_STAEQ -            224     0.012   15.6   0.3   1   1   1.7e-05     0.041   13.9   0.3    57    83   144   191    76   204 0.62 Domain of unknown function (DUF1910)
Latarcin             PF10279.4     81 sp|Q5HR69|SCDA_STAEQ -            224     0.055   13.6   0.0   1   1   0.00012      0.29   11.3   0.0    25    79    96   210    55   212 0.67 Latarcin precursor
Iron_permease        PF04120.7    133 sp|Q5HR69|SCDA_STAEQ -            224      0.42   10.1   2.5   2   2   0.00024      0.59    9.7   0.7    59   124   144   215   143   221 0.72 Low affinity iron permease
Transglycosylas      PF06737.9     77 sp|Q5HMC6|SCED_STAEQ -            219   1.6e-26   92.4   0.9   1   1   5.3e-30   1.6e-26   92.4   0.9     2    77   142   219   141   219 0.97 Transglycosylase-like domain
SLT                  PF01464.15   121 sp|Q5HMC6|SCED_STAEQ -            219    0.0012   18.3   1.6   2   2   9.5e-07    0.0028   17.1   0.1    15    70   145   197   132   209 0.85 Transglycosylase SLT domain
YHS                  PF04945.8     47 sp|Q5HMC6|SCED_STAEQ -            219     0.012   15.4   0.1   1   1   9.3e-06     0.028   14.2   0.1    18    34    63    79    48    81 0.86 YHS domain
CRA                  PF06589.6    157 sp|Q5HMC6|SCED_STAEQ -            219      0.83    8.9   7.3   2   2   0.00022      0.65    9.2   3.4   102   155    86   139    82   141 0.92 Circumsporozoite-related antigen (CRA)
ScpA_ScpB            PF02616.9    242 sp|Q5HP55|SCPA_STAEQ -            243   2.7e-35  122.1  12.0   1   1   7.4e-39   3.6e-35  121.6  12.0     1   239    19   234    19   236 0.88 ScpA/B protein
Rad21_Rec8           PF04824.11    55 sp|Q5HP55|SCPA_STAEQ -            243     0.041   13.0   0.0   1   1   1.7e-05     0.083   12.0   0.0    21    52   206   237   201   240 0.87 Conserved region of Rad21 / Rec8 like protein
DUF387               PF04079.11   159 sp|Q5HP56|SCPB_STAEQ -            180   2.8e-42  143.7   0.4   1   1   6.8e-46   3.4e-42  143.5   0.4     1   158     5   156     5   157 0.96 Putative transcriptional regulators (Ypuh-like)
DUF410               PF04190.8    260 sp|Q5HP56|SCPB_STAEQ -            180    0.0073   15.8   0.1   1   1   3.9e-06     0.019   14.5   0.0    89   150   111   174   103   175 0.85 Protein of unknown function (DUF410)
ydhR                 PF08803.6     97 sp|Q5HP56|SCPB_STAEQ -            180     0.015   15.3   0.1   1   1   4.1e-06      0.02   14.9   0.1     9    95    14   100     6   102 0.84 Putative mono-oxygenase ydhR
SecA_DEAD            PF07517.9    266 sp|Q5HQX6|SECA1_STAEQ -            844  3.2e-110  367.6   7.5   1   1  2.9e-113  6.2e-110  366.6   7.5     4   266     7   388     4   388 0.98 SecA DEAD-like domain
SecA_SW              PF07516.8    214 sp|Q5HQX6|SECA1_STAEQ -            844   1.4e-63  214.5  10.9   2   2   6.6e-67   1.4e-63  214.5  10.9     1   212   574   781   574   783 0.97 SecA Wing and Scaffold domain
SecA_PP_bind         PF01043.15   114 sp|Q5HQX6|SECA1_STAEQ -            844   1.8e-41  141.0   1.7   1   1   8.5e-45   1.8e-41  141.0   1.7     2   114   233   344   232   344 0.98 SecA preprotein cross-linking domain
SEC-C                PF02810.10    21 sp|Q5HQX6|SECA1_STAEQ -            844     5e-11   41.8  10.3   1   1   3.6e-14   7.6e-11   41.3  10.3     1    19   825   843   825   844 0.97 SEC-C motif
DEAD                 PF00270.24   169 sp|Q5HQX6|SECA1_STAEQ -            844     1e-06   28.3   0.1   1   2   2.4e-09   5.1e-06   26.0   0.0    18   132   103   219    87   232 0.80 DEAD/DEAH box helicase
Helicase_C           PF00271.26    78 sp|Q5HQX6|SECA1_STAEQ -            844    0.0008   19.2   0.3   1   1   1.3e-06    0.0028   17.4   0.3     2    78   454   536   453   536 0.83 Helicase conserved C-terminal domain
D5_N                 PF08706.6    150 sp|Q5HQX6|SECA1_STAEQ -            844    0.0041   17.2   1.4   2   2   1.3e-05     0.027   14.5   0.1    52   109   601   667   547   716 0.82 D5 N terminal like
SecA_DEAD            PF07517.9    266 sp|Q5HKR6|SECA2_STAEQ -            796   3.9e-94  314.8   0.7   1   3   1.6e-97   3.9e-94  314.8   0.7     9   265    10   385     3   386 0.97 SecA DEAD-like domain
SecA_SW              PF07516.8    214 sp|Q5HKR6|SECA2_STAEQ -            796   1.6e-34  119.5  16.9   1   1   6.5e-38   1.6e-34  119.5  16.9     4   211   579   780   576   783 0.88 SecA Wing and Scaffold domain
SecA_PP_bind         PF01043.15   114 sp|Q5HKR6|SECA2_STAEQ -            796     5e-30  104.1   0.1   1   2     2e-33     5e-30  104.1   0.1     4   114   233   342   230   342 0.98 SecA preprotein cross-linking domain
DEAD                 PF00270.24   169 sp|Q5HKR6|SECA2_STAEQ -            796   4.3e-08   32.8   0.0   1   2   8.2e-11     2e-07   30.6   0.0    14   132    92   217    80   237 0.78 DEAD/DEAH box helicase
Helicase_C           PF00271.26    78 sp|Q5HKR6|SECA2_STAEQ -            796     0.014   15.2   0.0   1   1   1.8e-05     0.046   13.5   0.0    34    78   482   534   443   534 0.88 Helicase conserved C-terminal domain
SecE                 PF00584.15    57 sp|Q5HRL7|SECE_STAEQ -             60   3.9e-18   64.7   2.8   1   1   2.8e-22   4.1e-18   64.6   2.8     4    56     6    58     3    59 0.94 SecE/Sec61-gamma subunits of protein translocation complex
SecG                 PF03840.9     74 sp|Q5HQU8|SECG_STAEQ -             77   8.1e-25   86.3   6.1   1   1   1.2e-28   8.7e-25   86.2   6.1     1    72     2    75     2    77 0.97 Preprotein translocase SecG subunit
SecY                 PF00344.15   346 sp|Q5HM19|SECY_STAEQ -            430  1.2e-109  366.4  30.1   1   1  2.2e-113  1.6e-109  366.0  30.1     1   346    69   413    69   413 0.93 SecY translocase
PEN-2                PF10251.4     94 sp|Q5HM19|SECY_STAEQ -            430       2.8    8.2   6.4   2   2   6.7e-05       0.5   10.6   0.1    39    87   290   339   265   342 0.73 Presenilin enhancer-2 subunit of gamma secretase
DUF552               PF04472.7     73 sp|Q5HQ03|SEPF_STAEQ -            197   6.3e-29   99.7   0.1   1   1   3.4e-32   1.3e-28   98.7   0.1     2    72   111   181   110   182 0.98 Protein of unknown function (DUF552)
Ndc1_Nup             PF09531.5    602 sp|Q5HQ03|SEPF_STAEQ -            197      0.37    9.1   5.0   1   1   0.00011      0.42    8.9   5.0   367   467    25   127     9   162 0.61 Nucleoporin protein Ndc1-Nup
Sigma70_r3           PF04539.11    78 sp|Q5HNY7|SIGA_STAEQ -            368   3.5e-32  110.1   6.2   2   3   2.8e-34   4.2e-31  106.6   1.6     1    78   214   291   214   291 0.99 Sigma-70 region 3
Sigma70_r4           PF04545.11    50 sp|Q5HNY7|SIGA_STAEQ -            368   4.5e-25   86.7   5.5   2   3   0.00015      0.23   10.8   0.0    24    44   237   257   235   259 0.92 Sigma-70, region 4
Sigma70_r4           PF04545.11    50 sp|Q5HNY7|SIGA_STAEQ -            368   4.5e-25   86.7   5.5   3   3     6e-24   8.9e-21   72.9   1.8     1    50   303   356   303   356 0.98 Sigma-70, region 4
Sigma70_r2           PF04542.9     71 sp|Q5HNY7|SIGA_STAEQ -            368   1.3e-23   82.3   0.1   1   1   1.6e-26   2.4e-23   81.5   0.1     1    71   135   205   135   205 0.98 Sigma-70 region 2
Sigma70_r1_2         PF00140.15    37 sp|Q5HNY7|SIGA_STAEQ -            368   4.8e-20   70.9   0.4   1   1   7.8e-23   1.2e-19   69.7   0.4     1    37    96   132    96   132 0.97 Sigma-70 factor, region 1.2
Sigma70_r1_1         PF03979.9     82 sp|Q5HNY7|SIGA_STAEQ -            368   1.1e-18   66.9   5.4   1   2   7.4e-21   1.1e-17   63.7   3.9     3    77    16    89    14    94 0.88 Sigma-70 factor, region 1.1
Exonuc_VII_L         PF02601.10   319 sp|Q5HNY7|SIGA_STAEQ -            368     0.026   13.7   0.2   2   2   5.3e-05     0.079   12.1   0.0   102   167   255   319   248   363 0.72 Exonuclease VII, large subunit
DUF3196              PF11428.3    286 sp|Q5HNY7|SIGA_STAEQ -            368      0.03   13.6   1.3   1   1   3.4e-05     0.051   12.8   1.3    14    67    30    83    19    91 0.81 Protein of unknown function (DUF3196)
tify                 PF06200.9     36 sp|Q5HNY7|SIGA_STAEQ -            368     0.081   12.1   0.1   1   1   0.00011      0.16   11.2   0.1    21    35   244   258   243   259 0.91 tify domain
Sod_Fe_C             PF02777.13   106 sp|Q5HNZ5|SODM_STAEQ -            199   3.6e-45  152.1   1.6   1   1   8.9e-49   6.6e-45  151.3   1.6     3   106    94   195    92   195 0.97 Iron/manganese superoxide dismutases, C-terminal domain
Sod_Fe_N             PF00081.17    82 sp|Q5HNZ5|SODM_STAEQ -            199   4.7e-36  122.8   1.1   1   1   1.3e-39   9.5e-36  121.9   1.1     2    82     3    89     2    89 0.98 Iron/manganese superoxide dismutases, alpha-hairpin domain
SpoVG                PF04026.7     84 sp|Q5HRQ7|SP5G_STAEQ -            102   3.7e-38  129.4   0.1   1   1   2.9e-42   4.3e-38  129.2   0.1     1    83     1    83     1    84 0.98 SpoVG
SprT-like            PF10263.4    157 sp|Q5HMF3|SPRTL_STAEQ -            151   5.4e-28   97.6   1.0   1   1   1.2e-31   6.1e-28   97.4   1.0     2   155     7   146     6   148 0.95 SprT-like family
Zn-ribbon_8          PF09723.5     42 sp|Q5HMF3|SPRTL_STAEQ -            151    0.0017   18.2   0.3   1   1   6.4e-07    0.0032   17.3   0.3     4    34   113   142   111   147 0.94 Zinc ribbon domain
DUF3133              PF11331.3     46 sp|Q5HMF3|SPRTL_STAEQ -            151     0.016   14.7   3.6   2   2   3.7e-06     0.018   14.5   1.0    24    43   127   146   122   148 0.83 Protein of unknown function (DUF3133)
ArsC                 PF03960.10   110 sp|Q5HQH3|SPX_STAEQ  -            131   2.9e-39  133.5   0.1   1   1   2.3e-42   3.4e-39  133.3   0.1     1   110     5   113     5   113 0.99 ArsC family
Glutaredoxin         PF00462.19    60 sp|Q5HQH3|SPX_STAEQ  -            131   1.6e-09   37.6   0.0   1   1   3.6e-12   5.4e-09   35.9   0.0     1    45     2    46     2    56 0.93 Glutaredoxin
GST_N_3              PF13417.1     75 sp|Q5HQH3|SPX_STAEQ  -            131   0.00082   19.5   0.0   1   1   8.3e-07    0.0012   18.9   0.0     1    29     4    32     4    53 0.87 Glutathione S-transferase, N-terminal domain
Thioredoxin_2        PF13098.1    112 sp|Q5HQH3|SPX_STAEQ  -            131    0.0042   17.2   0.0   1   1   3.7e-06    0.0054   16.9   0.0     9    80     2    69     1    93 0.82 Thioredoxin-like domain
DUF1223              PF06764.6    202 sp|Q5HQH3|SPX_STAEQ  -            131    0.0082   15.9   0.1   1   1   8.1e-06     0.012   15.4   0.1     2    23     2    23     1    40 0.87 Protein of unknown function (DUF1223)
DUF836               PF05768.9     81 sp|Q5HQH3|SPX_STAEQ  -            131      0.01   16.0   0.1   1   1   1.2e-05     0.018   15.3   0.1     2    37     2    33     1   114 0.75 Glutaredoxin-like domain (DUF836)
TilS_C               PF11734.3     74 sp|Q5HQH3|SPX_STAEQ  -            131     0.043   13.0   0.0   1   1   6.5e-05     0.097   11.9   0.0    21    38    14    31     8    34 0.92 TilS substrate C-terminal domain
Ish1                 PF10281.4     38 sp|Q5HQH3|SPX_STAEQ  -            131     0.077   13.0   0.1   1   1    0.0001      0.15   12.1   0.1     9    35    16    47    15    47 0.91 Putative stress-responsive nuclear envelope protein
DUF2184              PF09950.4    249 sp|Q5HQH3|SPX_STAEQ  -            131      0.12   11.4   0.0   1   1   9.5e-05      0.14   11.1   0.0   163   219    29    78    11    91 0.84 Uncharacterized protein conserved in bacteria (DUF2184)
SmpB                 PF01668.13    68 sp|Q5HQU5|SSRP_STAEQ -            156   9.9e-32  108.5   0.1   1   1   1.1e-35   1.6e-31  107.8   0.1     2    68    11    77    10    77 0.97 SmpB protein
ATP-grasp_2          PF08442.5    202 sp|Q5HPU5|SUCC_STAEQ -            388   1.3e-83  279.3   2.5   1   1   7.6e-87   2.3e-83  278.5   2.5     1   201     2   202     2   203 0.99 ATP-grasp domain
Ligase_CoA           PF00549.14   153 sp|Q5HPU5|SUCC_STAEQ -            388   8.7e-25   87.1   2.2   1   1     6e-28   1.8e-24   86.0   2.2     1   151   262   380   262   382 0.96 CoA-ligase
ATP-grasp_5          PF13549.1    222 sp|Q5HPU5|SUCC_STAEQ -            388     2e-09   37.0   1.9   1   1   3.9e-12   1.1e-08   34.5   1.9    11   221     4   217     2   218 0.77 ATP-grasp domain
GARS_A               PF01071.14   194 sp|Q5HPU5|SUCC_STAEQ -            388     0.004   16.7   0.3   1   1   2.9e-06    0.0087   15.6   0.3     7    75     9    81     5   121 0.86 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain
ATP-grasp_4          PF13535.1    184 sp|Q5HPU5|SUCC_STAEQ -            388     0.057   13.1   0.1   1   1   3.2e-05     0.095   12.4   0.1     9   113     9   129     6   153 0.77 ATP-grasp domain
CoA_binding          PF02629.14    96 sp|Q5HPU4|SUCD_STAEQ -            302   1.8e-28   98.8   2.2   1   2   4.9e-32   1.8e-28   98.8   2.2     1    96     6    99     6    99 0.98 CoA binding domain
Ligase_CoA           PF00549.14   153 sp|Q5HPU4|SUCD_STAEQ -            302   8.6e-19   67.6   1.3   1   1   4.2e-22   1.6e-18   66.7   1.3     1   147   151   266   151   271 0.94 CoA-ligase
Succ_CoA_lig         PF13607.1    138 sp|Q5HPU4|SUCD_STAEQ -            302   7.2e-08   32.1   0.0   1   1   3.2e-11   1.2e-07   31.4   0.0     1   105   145   250   145   289 0.80 Succinyl-CoA ligase like flavodoxin domain
CoA_binding_2        PF13380.1    116 sp|Q5HPU4|SUCD_STAEQ -            302   2.7e-06   27.5   2.4   1   3     8e-09     3e-05   24.1   0.3    21   114    26   128    10   130 0.89 CoA binding domain
tRNA-synt_2c         PF01411.14   552 sp|Q5HNT2|SYA_STAEQ  -            876  1.7e-207  690.1   3.7   1   2  5.6e-211  1.7e-207  690.1   3.7     1   551     8   556     8   557 0.99 tRNA synthetases class II (A)
tRNA_SAD             PF07973.9     44 sp|Q5HNT2|SYA_STAEQ  -            876   6.3e-18   64.3   0.2   1   1   7.5e-21   2.2e-17   62.6   0.2     1    44   654   697   654   697 0.98 Threonyl and Alanyl tRNA synthetase second additional domain
DHHA1                PF02272.14    68 sp|Q5HNT2|SYA_STAEQ  -            876   2.3e-17   62.4   0.2   2   2   4.7e-20   1.4e-16   59.9   0.1     2    67   802   870   801   871 0.95 DHHA1 domain
NolX                 PF05819.6    624 sp|Q5HNT2|SYA_STAEQ  -            876     0.039   12.3   0.1   1   1   2.1e-05     0.063   11.6   0.1   518   600   497   579   490   586 0.91 NolX protein
SieB                 PF14163.1    151 sp|Q5HNT2|SYA_STAEQ  -            876      0.17   11.4   1.2   1   1   0.00015      0.46   10.0   1.2    59   104   718   762   703   787 0.83 Superinfection exclusion protein B
tRNA-synt_1e         PF01406.14   301 sp|Q5HRM3|SYC_STAEQ  -            466  7.1e-132  439.0   0.2   1   1  9.2e-135  1.4e-131  438.1   0.2     2   299    15   311    14   313 0.98 tRNA synthetases class I (C) catalytic domain
DALR_2               PF09190.6     63 sp|Q5HRM3|SYC_STAEQ  -            466   3.5e-16   59.1   0.1   1   1   7.1e-19     1e-15   57.6   0.1     1    60   351   413   351   417 0.91 DALR domain
tRNA-synt_1g         PF09334.6    391 sp|Q5HRM3|SYC_STAEQ  -            466   1.5e-15   56.7   0.4   1   2   2.7e-08     4e-05   22.4   0.1    12   119    34   140    25   148 0.83 tRNA synthetases class I (M)
tRNA-synt_1g         PF09334.6    391 sp|Q5HRM3|SYC_STAEQ  -            466   1.5e-15   56.7   0.4   2   2   2.7e-11     4e-08   32.3   0.0   313   356   251   294   232   308 0.87 tRNA synthetases class I (M)
tRNA-synt_1          PF00133.17   601 sp|Q5HRM3|SYC_STAEQ  -            466   5.9e-11   41.0   0.5   1   3   0.00033      0.49    8.3   0.0    28   131    26   127    11   144 0.74 tRNA synthetases class I (I, L, M and V)
tRNA-synt_1          PF00133.17   601 sp|Q5HRM3|SYC_STAEQ  -            466   5.9e-11   41.0   0.5   2   3   9.5e-11   1.4e-07   29.9   0.0   516   592   221   295   211   304 0.82 tRNA synthetases class I (I, L, M and V)
tRNA-synt_1f         PF01921.13   360 sp|Q5HRM3|SYC_STAEQ  -            466   1.9e-10   39.9   0.6   1   2   6.8e-06      0.01   14.5   0.1    31   124    30   130    10   156 0.73 tRNA synthetases class I (K)
tRNA-synt_1f         PF01921.13   360 sp|Q5HRM3|SYC_STAEQ  -            466   1.9e-10   39.9   0.6   2   2   1.1e-08   1.6e-05   23.7   0.0   274   341   258   323   204   353 0.73 tRNA synthetases class I (K)
tRNA-synt_1d         PF00750.14   354 sp|Q5HRM3|SYC_STAEQ  -            466   4.6e-06   25.6   0.1   1   3   2.7e-05      0.04   12.7   0.0    21    68    22    69     3    99 0.79 tRNA synthetases class I (R)
tRNA-synt_1d         PF00750.14   354 sp|Q5HRM3|SYC_STAEQ  -            466   4.6e-06   25.6   0.1   2   3   0.00036      0.53    9.0   0.1   150   204    92   148    72   158 0.71 tRNA synthetases class I (R)
Med30                PF11315.3    150 sp|Q5HRM3|SYC_STAEQ  -            466     0.011   15.8   2.1   2   2   2.2e-05     0.032   14.3   0.3    44   118   383   455   370   464 0.88 Mediator complex subunit 30
MCPsignal            PF00015.16   213 sp|Q5HRM3|SYC_STAEQ  -            466     0.095   12.2   0.0   1   1   0.00014      0.21   11.1   0.0   114   190   292   367   273   390 0.77 Methyl-accepting chemotaxis protein (MCP) signalling domain
UVR                  PF02151.14    36 sp|Q5HRM3|SYC_STAEQ  -            466      0.31   10.6   7.1   1   1   0.00052      0.77    9.3   7.1     4    32   421   449   418   450 0.94 UvrB/uvrC motif
tRNA-synt_2          PF00152.15   335 sp|Q5HNS2|SYD_STAEQ  -            588  2.4e-136  453.9   0.1   1   1    1e-139    3e-136  453.6   0.1     1   334   123   561   123   562 0.99 tRNA synthetases class II (D, K and N)
GAD                  PF02938.9     95 sp|Q5HNS2|SYD_STAEQ  -            588   2.7e-27   94.7   0.1   1   1   2.4e-30   7.1e-27   93.4   0.1     1    95   314   408   314   408 0.99 GAD domain
tRNA_anti-codon      PF01336.20    75 sp|Q5HNS2|SYD_STAEQ  -            588   2.9e-18   65.4   1.8   1   1   2.6e-21   7.7e-18   64.1   1.8     1    75    20   105    20   105 0.95 OB-fold nucleic acid binding domain
tRNA-synt_2b         PF00587.20   173 sp|Q5HNS2|SYD_STAEQ  -            588   0.00021   20.9   0.1   2   2   1.9e-06    0.0057   16.2   0.0    85   143   214   270   204   339 0.84 tRNA synthetase class II core domain (G, H, P, S and T)
tRNA-synt_2d         PF01409.15   247 sp|Q5HNS2|SYD_STAEQ  -            588    0.0048   16.1   1.4   1   2   9.7e-05      0.29   10.3   0.1   104   157   214   269   203   277 0.83 tRNA synthetases class II core domain (F)
tRNA-synt_1c         PF00749.16   314 sp|Q5HRM5|SYE_STAEQ  -            484  2.2e-126  420.7   0.0   1   1  5.6e-130  2.8e-126  420.4   0.0     2   314     5   323     4   323 0.99 tRNA synthetases class I (E and Q), catalytic domain
tRNA-synt_1f         PF01921.13   360 sp|Q5HRM5|SYE_STAEQ  -            484    0.0019   16.9   0.0   2   2   3.8e-05      0.19   10.3   0.0   241   332   215   306   206   341 0.80 tRNA synthetases class I (K)
DUF2624              PF11116.3     86 sp|Q5HRM5|SYE_STAEQ  -            484     0.066   13.7   0.1   1   1   6.6e-05      0.33   11.5   0.0    31    68   402   441   383   447 0.80 Protein of unknown function (DUF2624)
tRNA-synt_2d         PF01409.15   247 sp|Q5HQ36|SYFA_STAEQ -            352  5.5e-109  363.1   0.0   1   1  3.2e-112  6.7e-109  362.8   0.0     2   247    95   343    94   343 0.98 tRNA synthetases class II core domain (F)
Phe_tRNA-synt_N      PF02912.13    73 sp|Q5HQ36|SYFA_STAEQ -            352   7.6e-26   89.6   5.5   1   1   6.4e-29   1.3e-25   88.8   5.5     2    72    20    90    19    91 0.98 Aminoacyl tRNA synthetase class II, N-terminal domain
DUF458               PF04308.7    144 sp|Q5HQ36|SYFA_STAEQ -            352     0.028   14.1   0.2   1   1   3.3e-05      0.07   12.8   0.1    58   125    60   129    53   131 0.89 Protein of unknown function (DUF458)
Kinetocho_Slk19      PF12709.2     87 sp|Q5HQ36|SYFA_STAEQ -            352     0.089   12.8   4.2   1   1   0.00011      0.22   11.5   4.2    33    85    29    83    25    85 0.89 Central kinetochore-associated
DUF515               PF04415.7    416 sp|Q5HQ36|SYFA_STAEQ -            352      0.12   10.5   4.1   1   1   7.7e-05      0.16   10.1   4.1    85   187     9   102     3   138 0.82 Protein of unknown function (DUF515)
B3_4                 PF03483.12   174 sp|Q5HQ35|SYFB_STAEQ -            800   7.1e-62  207.9   0.0   2   2   6.1e-65   2.3e-61  206.2   0.0     2   173   221   392   220   393 0.98 B3/4 domain
FDX-ACB              PF03147.9     94 sp|Q5HQ35|SYFB_STAEQ -            800   3.3e-27   94.4   0.1   2   2   6.6e-30   2.5e-26   91.6   0.0     1    94   708   800   708   800 0.98 Ferredoxin-fold anticodon binding domain
tRNA_bind            PF01588.15    95 sp|Q5HQ35|SYFB_STAEQ -            800   2.5e-24   84.9   0.2   1   1   1.2e-27   4.5e-24   84.1   0.2     1    95    45   152    45   152 0.89 Putative tRNA binding domain
B5                   PF03484.10    70 sp|Q5HQ35|SYFB_STAEQ -            800   1.7e-20   72.5   1.9   1   1   1.4e-23     5e-20   71.0   0.8     3    70   412   478   410   478 0.97 tRNA synthetase B5 domain
tRNA-synt_2b         PF00587.20   173 sp|Q5HNY2|SYG_STAEQ  -            463   1.2e-49  168.2   0.5   1   1   3.1e-53   2.3e-49  167.2   0.5     1   171    41   285    41   286 0.94 tRNA synthetase class II core domain (G, H, P, S and T)
HGTP_anticodon       PF03129.15    94 sp|Q5HNY2|SYG_STAEQ  -            463     1e-23   83.0   0.1   2   2   7.3e-27   5.4e-23   80.7   0.0     1    93   372   459   372   460 0.96 Anticodon binding domain
tRNA-synt_His        PF13393.1    311 sp|Q5HNS1|SYH_STAEQ  -            424   1.1e-46  159.3   0.0   1   1     6e-50   1.8e-46  158.6   0.0     1   311     7   313     7   313 0.85 Histidyl-tRNA synthetase
tRNA-synt_2b         PF00587.20   173 sp|Q5HNS1|SYH_STAEQ  -            424   2.2e-29  102.2   0.3   1   1   1.2e-32   3.7e-29  101.5   0.3     2   164    19   177    18   185 0.94 tRNA synthetase class II core domain (G, H, P, S and T)
HGTP_anticodon       PF03129.15    94 sp|Q5HNS1|SYH_STAEQ  -            424   4.3e-19   68.2   1.1   1   1   4.2e-22   1.2e-18   66.7   1.1     2    93   332   420   331   421 0.96 Anticodon binding domain
tRNA-synt_2d         PF01409.15   247 sp|Q5HNS1|SYH_STAEQ  -            424    0.0013   17.9   0.1   1   2   5.7e-06     0.017   14.3   0.0    64   157    60   157     5   165 0.65 tRNA synthetases class II core domain (F)
HGTP_anticodon2      PF12745.2    273 sp|Q5HNS1|SYH_STAEQ  -            424     0.027   13.6   0.4   1   1   1.4e-05     0.043   12.9   0.4    21   104   344   420   332   423 0.87 Anticodon binding domain of tRNAs
tRNA-synt_1          PF00133.17   601 sp|Q5HPZ9|SYI_STAEQ  -            916  5.9e-229  761.0   1.1   1   1  3.9e-232  7.2e-229  760.7   1.1     1   601    26   634    26   634 0.98 tRNA synthetases class I (I, L, M and V)
Anticodon_1          PF08264.8    153 sp|Q5HPZ9|SYI_STAEQ  -            916   2.7e-31  108.3   1.5   1   1   3.1e-34   5.8e-31  107.3   1.5     1   153   678   831   678   831 0.91 Anticodon-binding domain of tRNA
tRNA-synt_1g         PF09334.6    391 sp|Q5HPZ9|SYI_STAEQ  -            916   3.3e-26   91.8   4.4   1   3   1.2e-19   2.3e-16   59.4   0.0     8   136    57   199    53   220 0.85 tRNA synthetases class I (M)
tRNA-synt_1g         PF09334.6    391 sp|Q5HPZ9|SYI_STAEQ  -            916   3.3e-26   91.8   4.4   2   3   0.00034      0.62    8.6   0.0   173   238   401   464   369   474 0.78 tRNA synthetases class I (M)
tRNA-synt_1g         PF09334.6    391 sp|Q5HPZ9|SYI_STAEQ  -            916   3.3e-26   91.8   4.4   3   3   1.4e-08   2.5e-05   23.1   0.0   312   374   579   641   566   660 0.73 tRNA synthetases class I (M)
zf-FPG_IleRS         PF06827.9     30 sp|Q5HPZ9|SYI_STAEQ  -            916   7.7e-12   44.5   2.6   1   1   8.3e-15   1.5e-11   43.6   2.6     1    30   882   911   882   911 0.98 Zinc finger found in FPG and IleRS
tRNA-synt_1e         PF01406.14   301 sp|Q5HPZ9|SYI_STAEQ  -            916   1.4e-10   40.8   0.0   1   2     7e-05      0.13   11.3   0.0    21   172    61   231    51   237 0.73 tRNA synthetases class I (C) catalytic domain
tRNA-synt_1e         PF01406.14   301 sp|Q5HPZ9|SYI_STAEQ  -            916   1.4e-10   40.8   0.0   2   2   1.3e-09   2.5e-06   26.8   0.0   222   299   563   641   544   643 0.86 tRNA synthetases class I (C) catalytic domain
tRNA-synt_1_2        PF13603.1    185 sp|Q5HPZ9|SYI_STAEQ  -            916   1.3e-05   24.6   0.1   2   2   4.8e-08   8.9e-05   21.8   0.0     7   139   205   348   203   377 0.72 Leucyl-tRNA synthetase, Domain 2
tRNA-synt_1f         PF01921.13   360 sp|Q5HPZ9|SYI_STAEQ  -            916   0.00066   18.4   0.0   1   1   9.2e-07    0.0017   17.0   0.0   263   340   574   652   551   675 0.83 tRNA synthetases class I (K)
Av_adeno_fibre       PF06536.6     97 sp|Q5HPZ9|SYI_STAEQ  -            916     0.085   12.5   0.0   1   1   0.00012      0.23   11.1   0.0    10    35   823   848   818   864 0.82 Avian adenovirus fibre
tRNA-synt_2          PF00152.15   335 sp|Q5HRN7|SYK_STAEQ  -            495   8.2e-98  327.2   4.1   1   1  3.5e-101     1e-97  326.9   4.1     2   334   155   493   154   494 0.93 tRNA synthetases class II (D, K and N)
tRNA_anti-codon      PF01336.20    75 sp|Q5HRN7|SYK_STAEQ  -            495     3e-13   49.4   0.4   1   1   1.9e-16   5.7e-13   48.5   0.4     1    75    61   138    61   138 0.94 OB-fold nucleic acid binding domain
tRNA-synt_2d         PF01409.15   247 sp|Q5HRN7|SYK_STAEQ  -            495   2.1e-06   27.0   1.9   1   2     7e-07    0.0021   17.3   0.1   104   163   246   306   244   310 0.80 tRNA synthetases class II core domain (F)
tRNA-synt_2b         PF00587.20   173 sp|Q5HRN7|SYK_STAEQ  -            495   2.1e-05   24.1   1.6   1   2   2.6e-05     0.077   12.5   0.1     2    28   179   204   178   206 0.91 tRNA synthetase class II core domain (G, H, P, S and T)
tRNA-synt_2b         PF00587.20   173 sp|Q5HRN7|SYK_STAEQ  -            495   2.1e-05   24.1   1.6   2   2   0.00014       0.4   10.2   0.2    85   136   246   295   245   356 0.76 tRNA synthetase class II core domain (G, H, P, S and T)
Methyltransf_23      PF13489.1    161 sp|Q5HRN7|SYK_STAEQ  -            495    0.0021   17.7   0.0   1   1   1.9e-06    0.0055   16.4   0.0    71   118   156   203    22   233 0.81 Methyltransferase domain
tRNA-synt_1          PF00133.17   601 sp|Q5HNF1|SYL_STAEQ  -            804   5.7e-73  245.9   4.6   1   2   6.4e-52   1.4e-48  165.3   5.8     2   353    12   407    11   413 0.90 tRNA synthetases class I (I, L, M and V)
tRNA-synt_1          PF00133.17   601 sp|Q5HNF1|SYL_STAEQ  -            804   5.7e-73  245.9   4.6   2   2   5.3e-24   1.1e-20   73.1   0.0   414   588   412   603   406   616 0.73 tRNA synthetases class I (I, L, M and V)
tRNA-synt_1_2        PF13603.1    185 sp|Q5HNF1|SYL_STAEQ  -            804   1.3e-68  229.9   0.0   1   1   1.1e-71   2.4e-68  229.0   0.0     1   184   219   398   219   399 0.96 Leucyl-tRNA synthetase, Domain 2
tRNA-synt_1g         PF09334.6    391 sp|Q5HNF1|SYL_STAEQ  -            804   1.3e-27   96.4   3.2   1   3   2.1e-23   4.4e-20   71.6   0.0     8   135    40   170    37   243 0.93 tRNA synthetases class I (M)
tRNA-synt_1g         PF09334.6    391 sp|Q5HNF1|SYL_STAEQ  -            804   1.3e-27   96.4   3.2   3   3   2.2e-08   4.7e-05   22.2   0.0   312   367   560   616   505   622 0.84 tRNA synthetases class I (M)
Anticodon_1          PF08264.8    153 sp|Q5HNF1|SYL_STAEQ  -            804   2.9e-22   79.0   0.1   1   1   5.1e-25   1.1e-21   77.2   0.1     8   149   657   766   652   770 0.86 Anticodon-binding domain of tRNA
tRNA-synt_1e         PF01406.14   301 sp|Q5HNF1|SYL_STAEQ  -            804   5.1e-05   22.5   0.0   2   2   3.4e-05     0.072   12.1   0.0   245   279   567   602   553   624 0.78 tRNA synthetases class I (C) catalytic domain
tRNA-synt_1f         PF01921.13   360 sp|Q5HNF1|SYL_STAEQ  -            804   0.00051   18.8   0.0   2   2   1.4e-06    0.0029   16.3   0.0   265   309   557   603   551   613 0.82 tRNA synthetases class I (K)
tRNA-synt_1d         PF00750.14   354 sp|Q5HNF1|SYL_STAEQ  -            804     0.028   13.2   0.0   2   2   0.00012      0.25   10.1   0.0   275   304   564   592   527   603 0.78 tRNA synthetases class I (R)
tRNA-synt_1g         PF09334.6    391 sp|Q5HRR5|SYM_STAEQ  -            656  1.2e-131  439.0   0.0   1   1  9.7e-135  1.8e-131  438.4   0.0     1   391     6   372     6   372 0.98 tRNA synthetases class I (M)
tRNA-synt_1          PF00133.17   601 sp|Q5HRR5|SYM_STAEQ  -            656   8.3e-32  109.9   1.9   1   3   2.5e-17   4.7e-14   51.3   0.9    22   171     3   133     1   147 0.84 tRNA synthetases class I (I, L, M and V)
tRNA-synt_1          PF00133.17   601 sp|Q5HRR5|SYM_STAEQ  -            656   8.3e-32  109.9   1.9   3   3   6.2e-17   1.1e-13   50.0   0.0   483   591   232   338   228   347 0.88 tRNA synthetases class I (I, L, M and V)
tRNA_bind            PF01588.15    95 sp|Q5HRR5|SYM_STAEQ  -            656   2.5e-25   88.1   0.5   1   1   2.7e-28     5e-25   87.1   0.5     2    94   563   653   562   654 0.97 Putative tRNA binding domain
tRNA-synt_1e         PF01406.14   301 sp|Q5HRR5|SYM_STAEQ  -            656   9.8e-15   54.4   1.2   1   2   1.2e-13   2.2e-10   40.1   0.2    21   140    17   136     2   151 0.84 tRNA synthetases class I (C) catalytic domain
tRNA-synt_1e         PF01406.14   301 sp|Q5HRR5|SYM_STAEQ  -            656   9.8e-15   54.4   1.2   2   2   3.3e-05     0.062   12.4   0.0   239   282   294   337   285   340 0.88 tRNA synthetases class I (C) catalytic domain
Anticodon_1          PF08264.8    153 sp|Q5HRR5|SYM_STAEQ  -            656     3e-08   33.5   0.7   2   2   1.6e-11     3e-08   33.5   0.7     5   138   398   542   394   584 0.69 Anticodon-binding domain of tRNA
tRNA-synt_1d         PF00750.14   354 sp|Q5HRR5|SYM_STAEQ  -            656   5.6e-07   28.7   0.1   1   2   2.5e-07   0.00045   19.1   0.1    31    87    15    71    13   120 0.78 tRNA synthetases class I (R)
tRNA-synt_1f         PF01921.13   360 sp|Q5HRR5|SYM_STAEQ  -            656   6.6e-06   25.0   0.0   1   2   0.00018      0.33    9.5   0.0    31    70    13    52     2    84 0.87 tRNA synthetases class I (K)
tRNA-synt_1f         PF01921.13   360 sp|Q5HRR5|SYM_STAEQ  -            656   6.6e-06   25.0   0.0   2   2   1.5e-05     0.027   13.1   0.0   270   314   297   340   283   350 0.84 tRNA synthetases class I (K)
tRNA-synt_1c         PF00749.16   314 sp|Q5HRR5|SYM_STAEQ  -            656      0.13   10.8   1.2   1   2   0.00046      0.85    8.2   1.4    10    95    15   119    13   124 0.78 tRNA synthetases class I (E and Q), catalytic domain
tRNA-synt_2          PF00152.15   335 sp|Q5HP89|SYN_STAEQ  -            430   1.3e-84  283.8   0.1   1   1   5.8e-88   1.7e-84  283.4   0.1     3   332   111   423   109   426 0.93 tRNA synthetases class II (D, K and N)
tRNA_anti-codon      PF01336.20    75 sp|Q5HP89|SYN_STAEQ  -            430   4.7e-16   58.4   0.3   1   1   3.5e-19     1e-15   57.2   0.3     1    75    16    95    16    95 0.96 OB-fold nucleic acid binding domain
tRNA-synt_2b         PF00587.20   173 sp|Q5HP89|SYN_STAEQ  -            430   4.3e-05   23.1   0.4   1   1   2.8e-05     0.082   12.4   0.4    84   151   196   262   132   274 0.50 tRNA synthetase class II core domain (G, H, P, S and T)
DUF3206              PF11472.3    128 sp|Q5HP89|SYN_STAEQ  -            430     0.045   13.5   0.1   1   2   0.00016      0.48   10.1   0.0    53    85    36    68    33    82 0.87 Protein of unknown function (DUF3206)
tRNA-synt_2b         PF00587.20   173 sp|Q5HPS8|SYP_STAEQ  -            567   2.9e-39  134.4   0.0   1   1   1.6e-42   4.7e-39  133.7   0.0     2   167    50   213    49   219 0.96 tRNA synthetase class II core domain (G, H, P, S and T)
tRNA_edit            PF04073.10   123 sp|Q5HPS8|SYP_STAEQ  -            567   7.2e-28   96.9   0.0   1   1     4e-31   1.2e-27   96.1   0.0     1   123   257   375   257   375 0.96 Aminoacyl-tRNA editing domain
HGTP_anticodon       PF03129.15    94 sp|Q5HPS8|SYP_STAEQ  -            567   3.4e-15   55.7   0.4   1   1   3.5e-18     1e-14   54.1   0.4     3    94   473   562   471   562 0.94 Anticodon binding domain
Pol_alpha_B_N        PF08418.5    253 sp|Q5HPS8|SYP_STAEQ  -            567     0.026   14.0   0.2   1   1   2.1e-05     0.064   12.7   0.0   171   225   450   504   444   511 0.92 DNA polymerase alpha subunit B N-terminal
SplA                 PF11132.3     75 sp|Q5HPS8|SYP_STAEQ  -            567       1.5    8.5   4.4   2   2   0.00021      0.62    9.8   0.1    15    40   222   246   215   257 0.79 Transcriptional regulator protein (SplA)
tRNA-synt_1d         PF00750.14   354 sp|Q5HRD1|SYR_STAEQ  -            553     3e-74  249.9   2.7   1   1     6e-77   8.9e-74  248.4   2.7     2   319   102   413   101   445 0.90 tRNA synthetases class I (R)
DALR_1               PF05746.10   119 sp|Q5HRD1|SYR_STAEQ  -            553   9.7e-38  128.7   2.6   2   2   2.8e-40   4.1e-37  126.7   1.5     2   119   436   553   435   553 0.98 DALR anticodon binding domain
Arg_tRNA_synt_N      PF03485.11    85 sp|Q5HRD1|SYR_STAEQ  -            553   1.7e-26   92.6   0.6   1   1   5.9e-29   8.7e-26   90.2   0.6     2    85    10    93     8    93 0.96 Arginyl tRNA synthetase N terminal domain
tRNA-synt_1g         PF09334.6    391 sp|Q5HRD1|SYR_STAEQ  -            553   3.1e-09   35.9   5.1   2   4    0.0002      0.29    9.7   0.2    68   125   238   295   165   308 0.91 tRNA synthetases class I (M)
tRNA-synt_1g         PF09334.6    391 sp|Q5HRD1|SYR_STAEQ  -            553   3.1e-09   35.9   5.1   4   4     8e-08   0.00012   20.8   0.0   324   362   377   415   362   430 0.79 tRNA synthetases class I (M)
tRNA-synt_1          PF00133.17   601 sp|Q5HRD1|SYR_STAEQ  -            553   3.1e-08   32.1   0.2   1   2   4.8e-05     0.071   11.0   0.0    33   103   131   204   108   285 0.71 tRNA synthetases class I (I, L, M and V)
tRNA-synt_1          PF00133.17   601 sp|Q5HRD1|SYR_STAEQ  -            553   3.1e-08   32.1   0.2   2   2   2.4e-07   0.00035   18.7   0.0   554   593   373   412   363   419 0.85 tRNA synthetases class I (I, L, M and V)
tRNA-synt_1e         PF01406.14   301 sp|Q5HRD1|SYR_STAEQ  -            553   7.5e-08   31.8   6.6   1   2   3.1e-08   4.6e-05   22.6   0.3    21   135   134   296   115   328 0.87 tRNA synthetases class I (C) catalytic domain
tRNA-synt_1e         PF01406.14   301 sp|Q5HRD1|SYR_STAEQ  -            553   7.5e-08   31.8   6.6   2   2   3.3e-05     0.049   12.7   0.1   250   296   377   423   361   428 0.87 tRNA synthetases class I (C) catalytic domain
tRNA-synt_1f         PF01921.13   360 sp|Q5HRD1|SYR_STAEQ  -            553   9.7e-07   27.7   0.2   3   3   5.6e-07   0.00083   18.1   0.0   278   329   375   427   363   457 0.81 tRNA synthetases class I (K)
tRNA-synt_1c         PF00749.16   314 sp|Q5HRD1|SYR_STAEQ  -            553    0.0022   16.7   0.9   1   3    0.0002       0.3    9.7   0.0     9    24   131   146   128   156 0.87 tRNA synthetases class I (E and Q), catalytic domain
eRF1_2               PF03464.10   133 sp|Q5HRD1|SYR_STAEQ  -            553     0.012   15.9   0.0   1   1     2e-05     0.029   14.6   0.0    20    85    23    89    13   100 0.85 eRF1 domain 2
tRNA-synt_2b         PF00587.20   173 sp|Q5HK07|SYS_STAEQ  -            428   8.9e-37  126.3   0.0   1   1   2.5e-39   2.1e-36  125.1   0.0     1   173   173   344   173   344 0.98 tRNA synthetase class II core domain (G, H, P, S and T)
Seryl_tRNA_N         PF02403.17   108 sp|Q5HK07|SYS_STAEQ  -            428   3.5e-34  117.0  12.9   1   1   8.1e-37   6.6e-34  116.1  12.9     1   107     1   107     1   108 0.99 Seryl-tRNA synthetase N-terminal domain
DUF342               PF03961.8    451 sp|Q5HK07|SYS_STAEQ  -            428    0.0056   15.1   5.3   1   1   9.8e-06    0.0081   14.6   5.3   319   407    14    99    10   120 0.90 Protein of unknown function (DUF342)
V_ATPase_I           PF01496.14   759 sp|Q5HK07|SYS_STAEQ  -            428     0.011   13.6   2.9   1   1   1.9e-05     0.016   13.1   2.9    25   110    26   110    19   158 0.84 V-type ATPase 116kDa subunit family
DUF1465              PF07323.7    156 sp|Q5HK07|SYS_STAEQ  -            428     0.035   13.6   1.8   1   1     8e-05     0.066   12.7   1.8    85   152    12    79     6    83 0.88 Protein of unknown function (DUF1465)
HAUS-augmin3         PF14932.1    256 sp|Q5HK07|SYS_STAEQ  -            428      0.06   12.5   1.1   1   1   0.00014      0.11   11.6   1.1    75   146    29    99    23   106 0.89 HAUS augmin-like complex subunit 3
DUF4047              PF13256.1    125 sp|Q5HK07|SYS_STAEQ  -            428     0.071   13.0   3.1   1   1    0.0002      0.16   11.9   3.1    13    99    12    95     7   100 0.77 Domain of unknown function (DUF4047)
DUF948               PF06103.6     90 sp|Q5HK07|SYS_STAEQ  -            428     0.091   12.6   1.6   1   1   0.00027      0.22   11.4   1.6    35    89    31    88    24   104 0.89 Bacterial protein of unknown function (DUF948)
DUF2203              PF09969.4    120 sp|Q5HK07|SYS_STAEQ  -            428     0.091   12.9   2.6   1   1   0.00029      0.24   11.6   2.6    19    80    28    90    24   100 0.65 Uncharacterized conserved protein (DUF2203)
Mnd1                 PF03962.10   188 sp|Q5HK07|SYS_STAEQ  -            428     0.091   12.4   4.7   1   1   0.00019      0.16   11.6   3.7    66   130    33    94    14   101 0.89 Mnd1 family
TMPIT                PF07851.8    330 sp|Q5HK07|SYS_STAEQ  -            428      0.23   10.4   2.4   1   1    0.0004      0.33    9.9   2.4     9    91    27   104    19   111 0.80 TMPIT-like protein
APG6                 PF04111.7    315 sp|Q5HK07|SYS_STAEQ  -            428      0.29   10.1   4.3   1   1   0.00066      0.54    9.2   4.3    36   122    15    97     5   112 0.65 Autophagy protein Apg6
Metal_resist         PF13801.1    125 sp|Q5HK07|SYS_STAEQ  -            428      0.35   10.8   2.2   1   1   0.00065      0.54   10.2   1.1    54   103    34    83    29    86 0.93 Heavy-metal resistance
tRNA-synt_2b         PF00587.20   173 sp|Q5HNM1|SYT_STAEQ  -            645   1.7e-46  157.9   1.1   1   1   1.4e-49   4.1e-46  156.7   1.1     1   172   273   443   273   444 0.96 tRNA synthetase class II core domain (G, H, P, S and T)
HGTP_anticodon       PF03129.15    94 sp|Q5HNM1|SYT_STAEQ  -            645   4.8e-24   84.1   2.6   1   1   1.6e-27   4.8e-24   84.1   2.6     1    89   547   633   547   638 0.95 Anticodon binding domain
tRNA_SAD             PF07973.9     44 sp|Q5HNM1|SYT_STAEQ  -            645   1.2e-16   60.3   0.0   1   1     9e-20   2.7e-16   59.1   0.0     1    44   169   218   169   218 0.99 Threonyl and Alanyl tRNA synthetase second additional domain
TGS                  PF02824.16    60 sp|Q5HNM1|SYT_STAEQ  -            645   2.3e-15   56.1   0.0   1   1   1.9e-18   5.5e-15   54.9   0.0     1    60     4    63     4    63 0.97 TGS domain
tRNA-synt_His        PF13393.1    311 sp|Q5HNM1|SYT_STAEQ  -            645    0.0019   17.3   0.0   1   1   1.1e-06    0.0031   16.6   0.0     5   104   266   370   262   378 0.84 Histidyl-tRNA synthetase
tRNA-synt_1          PF00133.17   601 sp|Q5HNN9|SYV_STAEQ  -            876  2.1e-216  719.6   5.8   1   1  6.7e-218  6.6e-215  714.6   5.8     2   600    16   559    15   560 0.98 tRNA synthetases class I (I, L, M and V)
Anticodon_1          PF08264.8    153 sp|Q5HNN9|SYV_STAEQ  -            876   2.7e-42  144.0   0.3   1   1   5.4e-45   5.4e-42  143.1   0.3     1   149   604   748   604   752 0.87 Anticodon-binding domain of tRNA
tRNA-synt_1g         PF09334.6    391 sp|Q5HNN9|SYV_STAEQ  -            876   2.3e-30  105.5   1.7   1   2   3.3e-14   3.2e-11   42.5   0.0     5   135    41   189    37   238 0.75 tRNA synthetases class I (M)
tRNA-synt_1g         PF09334.6    391 sp|Q5HNN9|SYV_STAEQ  -            876   2.3e-30  105.5   1.7   2   2     2e-19     2e-16   59.6   0.9   172   376   347   569   292   579 0.75 tRNA synthetases class I (M)
Val_tRNA-synt_C      PF10458.4     66 sp|Q5HNN9|SYV_STAEQ  -            876   4.5e-23   81.1   8.3   1   1   1.1e-25   1.1e-22   79.8   8.3     1    66   810   875   810   875 0.99 Valyl tRNA synthetase tRNA binding arm
tRNA-synt_1_2        PF13603.1    185 sp|Q5HNN9|SYV_STAEQ  -            876   1.4e-11   44.0   0.0   2   2   1.7e-11   1.7e-08   33.9   0.0    86   148   242   304   240   338 0.83 Leucyl-tRNA synthetase, Domain 2
tRNA-synt_1e         PF01406.14   301 sp|Q5HNN9|SYV_STAEQ  -            876   3.8e-08   32.8   0.0   1   2   0.00037      0.37    9.8   0.0    11    51    38    78    27   112 0.87 tRNA synthetases class I (C) catalytic domain
tRNA-synt_1e         PF01406.14   301 sp|Q5HNN9|SYV_STAEQ  -            876   3.8e-08   32.8   0.0   2   2   2.2e-07   0.00022   20.4   0.0   217   298   483   566   476   569 0.71 tRNA synthetases class I (C) catalytic domain
tRNA-synt_1d         PF00750.14   354 sp|Q5HNN9|SYV_STAEQ  -            876   0.00058   18.7   1.9   1   2   4.3e-06    0.0042   15.9   0.0    16    61    33    76    21    85 0.83 tRNA synthetases class I (R)
tRNA-synt_1f         PF01921.13   360 sp|Q5HNN9|SYV_STAEQ  -            876     0.014   14.1   0.0   1   1   6.2e-05     0.061   11.9   0.0   274   312   512   550   499   571 0.84 tRNA synthetases class I (K)
OmpH                 PF03938.9    158 sp|Q5HNN9|SYV_STAEQ  -            876     0.049   13.5   1.4   1   1   8.7e-05     0.086   12.7   1.4    48   101   811   869   701   876 0.72 Outer membrane protein (OmpH-like)
IncA                 PF04156.9    191 sp|Q5HNN9|SYV_STAEQ  -            876     0.067   12.7   1.7   1   1   0.00012      0.12   11.9   1.7    83   150   808   875   791   876 0.87 IncA protein
End3                 PF12761.2    195 sp|Q5HNN9|SYV_STAEQ  -            876      0.09   12.4   5.1   1   1   0.00022      0.22   11.1   5.1    93   146   810   863   806   874 0.89 Actin cytoskeleton-regulatory complex protein END3
FemAB                PF02388.11   406 sp|Q5HNN9|SYV_STAEQ  -            876       0.1   11.2   1.8   1   1   0.00017      0.17   10.5   1.8   238   289   809   863   792   875 0.85 FemAB family
CCDC-167             PF15188.1     85 sp|Q5HNN9|SYV_STAEQ  -            876       0.3   11.0   3.4   1   1   0.00076      0.75    9.7   3.4     4    48   812   856   809   869 0.86 Coiled-coil domain-containing protein 167
tRNA-synt_1b         PF00579.20   292 sp|Q5HQH4|SYW_STAEQ  -            329   8.7e-80  267.9   0.0   1   1   7.7e-84   1.1e-79  267.5   0.0     7   291     3   281     1   282 0.97 tRNA synthetases class I (W and Y)
tRNA-synt_1b         PF00579.20   292 sp|Q5HNH6|SYY_STAEQ  -            421   1.2e-84  283.9   0.0   1   1   3.2e-88   1.6e-84  283.5   0.0     3   292    30   325    28   325 0.98 tRNA synthetases class I (W and Y)
S4                   PF01479.20    48 sp|Q5HNH6|SYY_STAEQ  -            421   5.4e-08   32.1   0.0   1   1   2.4e-11   1.2e-07   31.0   0.0    10    48   362   400   357   400 0.95 S4 domain
SIP1                 PF04938.7    233 sp|Q5HNH6|SYY_STAEQ  -            421    0.0089   15.4   0.0   1   1   2.8e-06     0.014   14.7   0.0    19   140   200   345   192   374 0.70 Survival motor neuron (SMN) interacting protein 1 (SIP1)
ABC_tran             PF00005.22   137 sp|Q5HR97|TAGH_STAEQ -            264   2.9e-17   63.2   0.1   1   1   3.8e-20   6.3e-17   62.1   0.1     1   136    40   171    40   172 0.86 ABC transporter
AAA_29               PF13555.1     62 sp|Q5HR97|TAGH_STAEQ -            264     0.012   15.1   0.1   1   1   1.4e-05     0.023   14.2   0.1    19    39    47    66    35    70 0.79 P-loop containing region of AAA domain
ArgK                 PF03308.11   267 sp|Q5HR97|TAGH_STAEQ -            264     0.019   13.7   0.2   1   1     2e-05     0.033   12.9   0.2    17    66    38    93    27   102 0.69 ArgK protein
DUF258               PF03193.11   161 sp|Q5HR97|TAGH_STAEQ -            264     0.032   13.4   0.1   1   1   4.1e-05     0.068   12.3   0.1    35    69    49    84    20    93 0.81 Protein of unknown function, DUF258
AAA_17               PF13207.1    121 sp|Q5HR97|TAGH_STAEQ -            264     0.046   14.5   3.1   1   1   2.1e-05     0.034   14.9   0.7     1    19    52    70    52   257 0.88 AAA domain
AAA_33               PF13671.1    143 sp|Q5HR97|TAGH_STAEQ -            264     0.094   12.5   0.5   1   1   0.00016      0.27   11.0   0.2     1    18    52    69    52    84 0.89 AAA domain
NB-ARC               PF00931.17   287 sp|Q5HR97|TAGH_STAEQ -            264       0.1   11.4   0.6   1   2   0.00012       0.2   10.4   0.1    16    39    47    70    31    79 0.83 NB-ARC domain
AAA_23               PF13476.1    202 sp|Q5HR97|TAGH_STAEQ -            264      0.13   12.5   7.3   1   1   0.00013      0.22   11.8   5.9    20   189    51   251    31   260 0.45 AAA domain
zinc_ribbon_2        PF13240.1     23 sp|Q5HLN7|TCAA_STAEQ -            462   2.1e-06   27.0   4.5   1   1   7.7e-09   4.3e-06   26.0   4.5     2    20     4    22     3    25 0.95 zinc-ribbon domain
zf-ribbon_3          PF13248.1     26 sp|Q5HLN7|TCAA_STAEQ -            462   2.5e-06   26.4   1.4   1   1   7.8e-09   4.3e-06   25.7   1.4     4    24     3    23     1    25 0.91 zinc-ribbon domain
DZR                  PF12773.2     50 sp|Q5HLN7|TCAA_STAEQ -            462   0.00028   20.6   3.7   1   1   9.4e-07   0.00052   19.7   3.7     1    25     4    28     3    42 0.82 Double zinc ribbon
UPF0547              PF10571.4     26 sp|Q5HLN7|TCAA_STAEQ -            462   0.00092   18.8   4.5   1   1   3.4e-06    0.0019   17.8   4.5     2    21     3    22     3    23 0.97 Uncharacterised protein family UPF0547
DUF912               PF06024.7    101 sp|Q5HLN7|TCAA_STAEQ -            462    0.0033   17.4   0.5   1   1   5.9e-06    0.0033   17.4   0.5    35    93    20    79     9    96 0.80 Nucleopolyhedrovirus protein of unknown function (DUF912)
Prok-RING_1          PF14446.1     55 sp|Q5HLN7|TCAA_STAEQ -            462    0.0094   15.6   2.3   1   1     3e-05     0.016   14.8   2.3     7    28     3    22     1    24 0.93 Prokaryotic RING finger family 1
YebO                 PF13974.1     80 sp|Q5HLN7|TCAA_STAEQ -            462     0.012   15.3   1.0   1   1   2.2e-05     0.012   15.3   1.0     5    78    59   135    56   137 0.74 YebO-like protein
DUF4446              PF14584.1    152 sp|Q5HLN7|TCAA_STAEQ -            462     0.055   13.2   0.4   1   1    0.0001     0.055   13.2   0.4     3    63    53   116    51   141 0.77 Protein of unknown function (DUF4446)
DUF3899              PF13038.1     92 sp|Q5HLN7|TCAA_STAEQ -            462     0.083   13.0   2.7   1   1   0.00021      0.12   12.5   0.2    40    91    23    72    21    73 0.75 Domain of unknown function (DUF3899)
DUF2839              PF10999.3     68 sp|Q5HLN7|TCAA_STAEQ -            462      0.12   12.3   0.1   1   1   0.00073       0.4   10.7   0.1    27    61    38    71    23    78 0.67 Protein of unknown function (DUF2839)
Spt4                 PF06093.8     77 sp|Q5HLN7|TCAA_STAEQ -            462      0.26   11.2   5.6   1   1    0.0016      0.89    9.4   3.7     4    43     4    40     1    43 0.80 Spt4/RpoE2 zinc finger
zf-LITAF-like        PF10601.4     73 sp|Q5HLN7|TCAA_STAEQ -            462      0.33   10.8   5.8   1   1   0.00086      0.47   10.3   3.3    47    72     4    29     2    30 0.90 LITAF-like zinc ribbon domain
FtsH_ext             PF06480.10   110 sp|Q5HLN7|TCAA_STAEQ -            462      0.39   10.8   9.8   1   1   5.3e-05     0.029   14.5   1.7     2    93    60   184    56   212 0.79 FtsH Extracellular
DUF2116              PF09889.4     59 sp|Q5HLN7|TCAA_STAEQ -            462      0.95    9.3  10.1   1   2   0.00045      0.25   11.1   3.9     6    39     4    36     2    38 0.92 Uncharacterized protein containing a Zn-ribbon (DUF2116)
zf-C4_Topoisom       PF01396.14    39 sp|Q5HLN7|TCAA_STAEQ -            462       1.3    8.5   9.7   2   2   0.00086      0.47    9.9   2.0     3    18    17    32    15    34 0.91 Topoisomerase DNA binding C4 zinc finger
zf-ISL3              PF14690.1     47 sp|Q5HLN7|TCAA_STAEQ -            462       3.3    7.7  13.2   2   2   0.00075      0.41   10.7   0.5     3    26    16    36    14    52 0.76 zinc-finger of transposase IS204/IS1001/IS1096/IS1165
TelA                 PF05816.6    333 sp|Q5HPD6|TELL_STAEQ -            376  1.3e-123  411.9  37.1   1   1    3e-127  1.5e-123  411.7  37.1     2   333    43   375    42   375 0.99 Toxic anion resistance protein (TelA)
DUF3452              PF11934.3    139 sp|Q5HPD6|TELL_STAEQ -            376    0.0053   16.0   2.8   1   2   1.1e-06    0.0053   16.0   2.8    11    78   108   174    98   212 0.81 Domain of unknown function (DUF3452)
Atx10homo_assoc      PF09759.4    102 sp|Q5HPD6|TELL_STAEQ -            376     0.016   14.9   1.2   2   2   3.2e-06     0.016   14.9   1.2    36    98   290   352   268   355 0.92 Spinocerebellar ataxia type 10 protein domain
TENA_THI-4           PF03070.11   210 sp|Q5HMC7|TENA_STAEQ -            229   2.8e-39  135.0   1.9   1   1   2.2e-43   3.2e-39  134.8   1.9     2   208     9   216     8   218 0.98 TENA/THI-4/PQQC family
TGT                  PF01702.13   238 sp|Q5HNR2|TGT_STAEQ  -            379  1.9e-105  351.4   0.0   1   1  1.6e-109  2.4e-105  351.0   0.0     1   237   130   366   130   367 0.99 Queuine tRNA-ribosyltransferase
TMP-TENI             PF02581.12   180 sp|Q5HMD0|THIE_STAEQ -            212   1.9e-56  190.0   0.1   1   1   7.1e-60   2.1e-56  189.8   0.1     1   180     9   194     9   194 0.98 Thiamine monophosphate synthase/TENI
DUF561               PF04481.7    243 sp|Q5HMD0|THIE_STAEQ -            212    0.0024   16.8   0.5   2   2     3e-05     0.088   11.7   0.0   187   230   164   207   153   211 0.93 Protein of unknown function (DUF561)
QRPTase_C            PF01729.14   169 sp|Q5HMD0|THIE_STAEQ -            212    0.0069   15.9   0.7   2   2   3.3e-05     0.096   12.1   0.1   122   165   158   201   143   205 0.85 Quinolinate phosphoribosyl transferase, C-terminal domain
NanE                 PF04131.9    192 sp|Q5HMD0|THIE_STAEQ -            212     0.022   13.7   0.0   1   1   1.1e-05     0.034   13.1   0.0    79   184    96   202    70   208 0.68 Putative N-acetylmannosamine-6-phosphate epimerase
SinI                 PF08671.5     30 sp|Q5HMD0|THIE_STAEQ -            212     0.022   14.1   0.0   1   1   2.2e-05     0.066   12.6   0.0     8    24    27    43    25    43 0.91 Anti-repressor SinI
ThiG                 PF05690.9    247 sp|Q5HLB4|THIG_STAEQ -            255  2.2e-100  334.8   0.1   1   1  1.3e-103  2.5e-100  334.6   0.1     1   247     3   248     3   248 0.98 Thiazole biosynthesis protein ThiG
His_biosynth         PF00977.16   229 sp|Q5HLB4|THIG_STAEQ -            255   1.9e-05   24.0   0.1   2   2   6.7e-08   0.00012   21.3   0.0   153   223   138   208   130   223 0.67 Histidine biosynthesis protein
NanE                 PF04131.9    192 sp|Q5HLB4|THIG_STAEQ -            255     0.004   16.1   0.7   2   2   1.5e-05     0.027   13.4   0.0   134   180   166   212   153   222 0.85 Putative N-acetylmannosamine-6-phosphate epimerase
FMN_dh               PF01070.13   357 sp|Q5HLB4|THIG_STAEQ -            255    0.0082   15.0   0.0   1   1   7.2e-06     0.013   14.3   0.0   275   308   173   204   155   212 0.80 FMN-dependent dehydrogenase
Dus                  PF01207.12   310 sp|Q5HLB4|THIG_STAEQ -            255     0.011   14.5   0.6   2   2   9.9e-06     0.018   13.8   0.0   175   224   168   218   136   241 0.83 Dihydrouridine synthase (Dus)
IMPDH                PF00478.20   352 sp|Q5HLB4|THIG_STAEQ -            255     0.035   12.9   0.1   1   1   2.8e-05     0.053   12.4   0.1   207   246   172   211   160   223 0.87 IMP dehydrogenase / GMP reductase domain
DUF561               PF04481.7    243 sp|Q5HLB4|THIG_STAEQ -            255     0.036   13.0   0.2   1   1   5.1e-05     0.095   11.6   0.2   179   230   170   221   125   228 0.86 Protein of unknown function (DUF561)
IGPS                 PF00218.16   254 sp|Q5HLB4|THIG_STAEQ -            255      0.14   11.2   0.0   1   1   0.00012      0.23   10.4   0.0   198   251   164   218   161   221 0.85 Indole-3-glycerol phosphate synthase
ThiI                 PF02568.9    197 sp|Q5HNJ0|THII_STAEQ -            407   7.3e-62  208.3   0.4   2   2   4.7e-65   1.7e-61  207.1   0.1     2   196   176   370   175   371 0.98 Thiamine biosynthesis protein (ThiI)
THUMP                PF02926.12   144 sp|Q5HNJ0|THII_STAEQ -            407   1.6e-19   70.2   1.2   1   2   4.2e-23   1.6e-19   70.2   1.2    18   141    44   162    39   163 0.94 THUMP domain
QueC                 PF06508.8    210 sp|Q5HNJ0|THII_STAEQ -            407     2e-06   27.2   0.2   2   2     1e-07   0.00038   19.7   0.1     2   185   180   342   179   353 0.74 Queuosine biosynthesis protein QueC
ATP_bind_3           PF01171.15   182 sp|Q5HNJ0|THII_STAEQ -            407     0.041   13.3   0.3   2   2   7.9e-05      0.29   10.5   0.1   124   158   296   330   179   336 0.81 PP-loop family
HK                   PF02110.10   246 sp|Q5HMC9|THIM_STAEQ -            262     4e-79  265.2   0.5   1   1   1.3e-82     5e-79  264.9   0.5     1   244     4   249     4   250 0.96 Hydroxyethylthiazole kinase family
Carb_kinase          PF01256.12   242 sp|Q5HMC9|THIM_STAEQ -            262   1.2e-07   31.2   0.1   1   1   3.9e-11   1.4e-07   31.0   0.1    92   227    80   228    14   246 0.72 Carbohydrate kinase
Phos_pyr_kin         PF08543.7    246 sp|Q5HMC9|THIM_STAEQ -            262   1.6e-05   24.2   0.2   1   1   6.3e-09   2.3e-05   23.6   0.2    66   216    60   205    41   232 0.79 Phosphomethylpyrimidine kinase
Thioredoxin          PF00085.15   104 sp|Q5HQ29|THIO_STAEQ -            104   8.2e-32  108.9   0.0   1   1   7.3e-35     9e-32  108.8   0.0     2   104     3   103     2   103 0.97 Thioredoxin
Thioredoxin_2        PF13098.1    112 sp|Q5HQ29|THIO_STAEQ -            104   5.5e-10   39.4   0.0   1   1   3.9e-12   4.8e-09   36.3   0.0     7   112    19   100    13   100 0.90 Thioredoxin-like domain
Thioredoxin_8        PF13905.1     95 sp|Q5HQ29|THIO_STAEQ -            104     1e-08   35.1   0.0   1   2   8.1e-09     1e-05   25.5   0.0     5    46    21    60    17    64 0.86 Thioredoxin-like
Thioredoxin_3        PF13192.1     76 sp|Q5HQ29|THIO_STAEQ -            104   1.3e-05   24.9   0.0   1   1   1.3e-08   1.6e-05   24.6   0.0     9    55    28    77    19   101 0.80 Thioredoxin domain
Thioredoxin_9        PF14595.1    129 sp|Q5HQ29|THIO_STAEQ -            104   2.7e-05   23.7   0.0   1   1   2.4e-08     3e-05   23.6   0.0    37   107    13    81     4   102 0.77 Thioredoxin
Redoxin              PF08534.5    146 sp|Q5HQ29|THIO_STAEQ -            104    0.0013   18.3   0.0   1   2   2.4e-06     0.003   17.0   0.0    26    58    15    46     4    71 0.80 Redoxin
AhpC-TSA             PF00578.16   124 sp|Q5HQ29|THIO_STAEQ -            104    0.0019   17.8   0.0   1   1   2.2e-06    0.0027   17.3   0.0    25    78    18    68     4    94 0.79 AhpC/TSA family
KaiB                 PF07689.7     82 sp|Q5HQ29|THIO_STAEQ -            104    0.0025   17.2   0.0   1   1   2.6e-06    0.0032   16.9   0.0    30    75    50    96    33   102 0.74 KaiB domain
Thioredoxin_7        PF13899.1     82 sp|Q5HQ29|THIO_STAEQ -            104    0.0027   17.6   0.0   1   1   3.5e-06    0.0043   17.0   0.0    21    80    21    78    18    80 0.81 Thioredoxin-like
HyaE                 PF07449.6    107 sp|Q5HQ29|THIO_STAEQ -            104    0.0052   16.6   0.0   1   1   5.5e-06    0.0067   16.3   0.0    48   102    37    91    31    96 0.88 Hydrogenase-1 expression protein HyaE
DUF836               PF05768.9     81 sp|Q5HQ29|THIO_STAEQ -            104     0.015   15.5   0.0   1   1   1.5e-05     0.019   15.2   0.0    10    52    29    74    24   102 0.86 Glutaredoxin-like domain (DUF836)
DSBA                 PF01323.15   193 sp|Q5HQ29|THIO_STAEQ -            104     0.074   12.6   0.0   2   2    0.0006      0.74    9.3   0.0   150   192    54   100    39   101 0.85 DSBA-like thioredoxin domain
Thiolase_N           PF00108.18   264 sp|Q5HS07|THLA_STAEQ -            394  1.5e-112  374.8   0.3   1   2    4e-116  1.5e-112  374.8   0.3     1   264     1   263     1   263 0.99 Thiolase, N-terminal domain
Thiolase_C           PF02803.13   123 sp|Q5HS07|THLA_STAEQ -            394   6.4e-45  151.5   1.0   2   2   1.7e-47   6.3e-44  148.3   0.7     2   122   271   390   270   391 0.97 Thiolase, C-terminal domain
ketoacyl-synt        PF00109.21   254 sp|Q5HS07|THLA_STAEQ -            394   3.6e-07   29.9   0.1   1   1   3.6e-10   1.3e-06   28.0   0.1   153   217    62   129     3   141 0.71 Beta-ketoacyl synthase, N-terminal domain
Trigger_N            PF05697.8    145 sp|Q5HNM8|TIG_STAEQ  -            433   5.4e-46  155.9   4.5   1   3   1.5e-49   5.4e-46  155.9   4.5     1   143     1   144     1   146 0.99 Bacterial trigger factor protein (TF)
Trigger_C            PF05698.9    162 sp|Q5HNM8|TIG_STAEQ  -            433   2.6e-44  150.9  18.7   3   3     7e-48   2.6e-44  150.9  18.7     2   160   265   420   264   422 0.98 Bacterial trigger factor protein (TF) C-terminus
FKBP_C               PF00254.23    94 sp|Q5HNM8|TIG_STAEQ  -            433   4.9e-17   61.7   1.8   4   4   1.3e-20   4.9e-17   61.7   1.8     4    90   159   236   156   245 0.89 FKBP-type peptidyl-prolyl cis-trans isomerase
SurA_N               PF09312.6    118 sp|Q5HNM8|TIG_STAEQ  -            433      0.47   10.3  13.0   3   3   8.3e-05      0.31   10.9   5.8    15    98   310   405   305   421 0.66 SurA N-terminal domain
ATP_bind_3           PF01171.15   182 sp|Q5HRP5|TILS_STAEQ -            432   1.1e-55  187.9   2.7   1   1   7.3e-59   1.8e-55  187.2   2.7     1   181    13   195    13   196 0.98 PP-loop family
TilS_C               PF11734.3     74 sp|Q5HRP5|TILS_STAEQ -            432   4.7e-10   38.5   0.0   1   1   3.5e-13   8.6e-10   37.7   0.0     1    62   358   420   358   427 0.93 TilS substrate C-terminal domain
PAPS_reduct          PF01507.14   174 sp|Q5HRP5|TILS_STAEQ -            432    0.0026   17.5   0.4   1   1   7.6e-06     0.019   14.8   0.4     2   156    14   178    13   180 0.57 Phosphoadenosine phosphosulfate reductase family
Asn_synthase         PF00733.16   255 sp|Q5HRP5|TILS_STAEQ -            432    0.0043   16.5   0.1   1   3   4.3e-05      0.11   12.0   0.0    17    94    11    90     7   136 0.78 Asparagine synthase
QueC                 PF06508.8    210 sp|Q5HRP5|TILS_STAEQ -            432     0.012   14.9   0.5   1   3   9.1e-05      0.22   10.7   0.1     2    81    14    92    13   116 0.67 Queuosine biosynthesis protein QueC
DUF2392              PF10288.4    107 sp|Q5HRP5|TILS_STAEQ -            432     0.036   14.4   1.3   1   1   2.9e-05     0.073   13.4   0.3    19    67   139   187   125   211 0.70 Protein of unknown function (DUF2392)
Transketolase_N      PF00456.16   333 sp|Q5HPJ9|TKT_STAEQ  -            662  4.1e-139  463.0   0.0   1   1  2.3e-142  5.6e-139  462.6   0.0     2   333     6   337     5   337 0.99 Transketolase, thiamine diphosphate binding domain
Transket_pyr         PF02779.19   178 sp|Q5HPJ9|TKT_STAEQ  -            662   2.6e-40  137.7   0.0   1   1   1.9e-43   4.6e-40  136.9   0.0     7   176   357   523   353   524 0.95 Transketolase, pyrimidine binding domain
DXP_synthase_N       PF13292.1    270 sp|Q5HPJ9|TKT_STAEQ  -            662     2e-07   30.2   0.4   2   2   1.2e-08   2.9e-05   23.1   0.3   144   270   122   245   122   245 0.74 1-deoxy-D-xylulose-5-phosphate synthase
Transketolase_C      PF02780.15   124 sp|Q5HPJ9|TKT_STAEQ  -            662   3.4e-06   26.9   0.0   1   1   3.1e-09   7.7e-06   25.8   0.0     8   124   548   655   540   655 0.87 Transketolase, C-terminal domain
TPP_enzyme_C         PF02775.16   153 sp|Q5HPJ9|TKT_STAEQ  -            662    0.0021   17.6   0.0   1   1   1.2e-05     0.029   13.9   0.0    24   153   111   243    90   243 0.75 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain
Nsp1_C               PF05064.8    117 sp|Q5HPJ9|TKT_STAEQ  -            662     0.026   14.1   0.4   2   2   6.8e-05      0.17   11.5   0.0    36    74   195   236   162   241 0.76 Nsp1-like C-terminal region
Topoisom_bac         PF01131.15   403 sp|Q5HPU2|TOP1_STAEQ -            689  4.6e-134  447.2  10.3   1   1  4.9e-137  6.1e-134  446.8  10.3     3   402   129   545   127   546 0.90 DNA topoisomerase
zf-C4_Topoisom       PF01396.14    39 sp|Q5HPU2|TOP1_STAEQ -            689   5.3e-33  112.2  21.9   1   3   6.5e-19     8e-16   57.2   1.3     2    37   575   610   574   612 0.94 Topoisomerase DNA binding C4 zinc finger
zf-C4_Topoisom       PF01396.14    39 sp|Q5HPU2|TOP1_STAEQ -            689   5.3e-33  112.2  21.9   2   3   5.3e-18   6.6e-15   54.3   2.5     2    38   615   653   614   654 0.96 Topoisomerase DNA binding C4 zinc finger
zf-C4_Topoisom       PF01396.14    39 sp|Q5HPU2|TOP1_STAEQ -            689   5.3e-33  112.2  21.9   3   3   0.00013      0.16   11.5   3.3     2    36   656   687   655   689 0.87 Topoisomerase DNA binding C4 zinc finger
Toprim               PF01751.17   100 sp|Q5HPU2|TOP1_STAEQ -            689   2.9e-24   84.9   0.1   1   1   7.1e-27   8.8e-24   83.3   0.1     2   100     5   113     4   113 0.96 Toprim domain
Toprim_4             PF13662.1     81 sp|Q5HPU2|TOP1_STAEQ -            689   4.5e-05   23.3   0.0   1   1   2.4e-07   0.00029   20.7   0.0     3    70     5   100     3   110 0.73 Toprim domain
RNA_POL_M_15KD       PF02150.11    35 sp|Q5HPU2|TOP1_STAEQ -            689     0.011   15.3   3.5   3   3   9.1e-06     0.011   15.3   3.5     4    32   658   687   657   689 0.91 RNA polymerases M/15 Kd subunit
Toprim_2             PF13155.1     96 sp|Q5HPU2|TOP1_STAEQ -            689     0.018   15.3   0.8   1   1   4.9e-05      0.06   13.6   0.1    34    83    63   110    40   121 0.63 Toprim-like
DUF2387              PF09526.5     71 sp|Q5HPU2|TOP1_STAEQ -            689      0.02   14.8   7.3   1   2   0.00057       0.7    9.8   0.2     8    30   614   636   612   649 0.79 Probable metal-binding protein (DUF2387)
Cys_rich_CPXG        PF14255.1     52 sp|Q5HPU2|TOP1_STAEQ -            689      0.52   10.1   0.0   1   1   0.00042      0.52   10.1   0.0    25    38   575   588   565   593 0.87 Cysteine-rich CPXCG
Topoisom_bac         PF01131.15   403 sp|Q5HLZ4|TOP3_STAEQ -            711  9.7e-106  353.9  13.1   1   1  5.9e-109  9.7e-106  353.9  13.1     3   403   152   570   150   570 0.91 DNA topoisomerase
Toprim               PF01751.17   100 sp|Q5HLZ4|TOP3_STAEQ -            711   4.3e-15   55.5   0.1   1   2   2.6e-18   4.3e-15   55.5   0.1     2    99     4   133     3   134 0.95 Toprim domain
zf-C4_Topoisom       PF01396.14    39 sp|Q5HLZ4|TOP3_STAEQ -            711    0.0003   20.2   5.0   1   2   1.8e-07    0.0003   20.2   5.0     3    38   599   633   597   634 0.94 Topoisomerase DNA binding C4 zinc finger
Toprim_4             PF13662.1     81 sp|Q5HLZ4|TOP3_STAEQ -            711     0.022   14.7   0.0   1   1   2.8e-05     0.047   13.7   0.0    45    72    87   121    40   129 0.74 Toprim domain
DUF2387              PF09526.5     71 sp|Q5HLZ4|TOP3_STAEQ -            711       1.3    9.0  10.2   2   2   4.8e-05      0.08   12.8   2.3     9    57   637   685   632   698 0.72 Probable metal-binding protein (DUF2387)
TIM                  PF00121.13   244 sp|Q5HQV2|TPIS_STAEQ -            253   3.7e-93  311.0   0.5   1   1   5.6e-97   4.2e-93  310.9   0.5     1   243     4   248     4   249 0.97 Triosephosphate isomerase
Redoxin              PF08534.5    146 sp|Q5HNJ2|TPX_STAEQ  -            164   1.8e-22   79.4   0.0   1   1     3e-26   2.2e-22   79.1   0.0     2   145    20   157    19   158 0.87 Redoxin
AhpC-TSA             PF00578.16   124 sp|Q5HNJ2|TPX_STAEQ  -            164   6.9e-17   61.2   0.0   1   1   1.3e-20   9.5e-17   60.8   0.0     2   124    21   142    20   142 0.93 AhpC/TSA family
ABM                  PF03992.11    78 sp|Q5HNA3|TRAP_STAEQ -            167    0.0011   19.0   0.0   1   1   1.1e-07    0.0017   18.3   0.0     9    73    73   135    66   139 0.92 Antibiotic biosynthesis monooxygenase
Methyltransf_4       PF02390.12   197 sp|Q5HNG2|TRMB_STAEQ -            215   4.6e-51  172.6   0.5   1   1   3.1e-54   5.7e-51  172.3   0.5     8   193    26   207    15   211 0.92 Putative methyltransferase
Methyltransf_31      PF13847.1    152 sp|Q5HNG2|TRMB_STAEQ -            215   0.00038   20.0   0.1   1   1   2.3e-07   0.00043   19.9   0.1     3    68    37   101    35   200 0.90 Methyltransferase domain
DUF938               PF06080.7    204 sp|Q5HNG2|TRMB_STAEQ -            215   0.00038   20.0   0.0   1   1   2.9e-07   0.00054   19.5   0.0    21    79    33    91    27   109 0.90 Protein of unknown function (DUF938)
Terminase_6          PF03237.10   384 sp|Q5HNG2|TRMB_STAEQ -            215     0.029   13.1   0.1   1   2   3.2e-05     0.059   12.1   0.0   267   333    22    93    11   107 0.76 Terminase-like family
MTS                  PF05175.9    170 sp|Q5HNG2|TRMB_STAEQ -            215     0.049   12.9   0.0   1   1   3.8e-05      0.07   12.5   0.0    34   136    40   148    27   160 0.77 Methyltransferase small domain
Methyltransf_26      PF13659.1    117 sp|Q5HNG2|TRMB_STAEQ -            215     0.085   12.8   0.0   1   1   5.9e-05      0.11   12.5   0.0     4   109    41   146    38   154 0.83 Methyltransferase domain
PCMT                 PF01135.14   210 sp|Q5HNG2|TRMB_STAEQ -            215     0.094   12.2   0.0   1   1   7.8e-05      0.14   11.6   0.0    66   132    31    95    24   101 0.78 Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT)
Methyltransf_12      PF08242.7     99 sp|Q5HNG2|TRMB_STAEQ -            215      0.13   12.7   0.0   1   1   0.00013      0.24   11.8   0.0     2    57    43    98    42   130 0.83 Methyltransferase domain
tRNA_m1G_MT          PF01746.16   186 sp|Q5HPV1|TRMD_STAEQ -            245   1.2e-61  207.5   0.0   1   1   9.7e-66   1.4e-61  207.3   0.0     2   186    23   219    22   219 0.98 tRNA (Guanine-1)-methyltransferase
GIDA                 PF01134.17   392 sp|Q5HPU1|TRMFO_STAEQ -            435  5.1e-115  384.4   0.0   1   1  6.7e-118  6.6e-115  384.0   0.0     1   390     4   365     4   367 0.99 Glucose inhibited division protein A
DAO                  PF01266.19   358 sp|Q5HPU1|TRMFO_STAEQ -            435   1.8e-07   30.4   0.0   1   2   3.1e-09     3e-06   26.3   0.0     2    35     5    38     4    65 0.87 FAD dependent oxidoreductase
NAD_binding_8        PF13450.1     68 sp|Q5HPU1|TRMFO_STAEQ -            435   3.4e-06   26.9   0.1   1   1   1.8e-08   1.7e-05   24.7   0.1     1    29     7    35     7    36 0.96 NAD(P)-binding Rossmann-like domain
Pyr_redox_2          PF07992.9    201 sp|Q5HPU1|TRMFO_STAEQ -            435   2.4e-05   24.3   0.1   1   1   6.5e-08   6.4e-05   22.9   0.1     1   120     4   137     4   172 0.63 Pyridine nucleotide-disulphide oxidoreductase
3HCDH_N              PF02737.13   180 sp|Q5HPU1|TRMFO_STAEQ -            435   0.00011   21.8   0.0   1   1     2e-07    0.0002   21.1   0.0     1    36     4    39     4    81 0.80 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain
Pyr_redox            PF00070.22    80 sp|Q5HPU1|TRMFO_STAEQ -            435   0.00017   21.9   0.0   1   1   7.8e-07   0.00077   19.8   0.0     2    32     5    35     4    59 0.92 Pyridine nucleotide-disulphide oxidoreductase
FAD_binding_2        PF00890.19   417 sp|Q5HPU1|TRMFO_STAEQ -            435   0.00027   19.9   0.7   1   1   4.3e-07   0.00042   19.2   0.0     4    35     7    38     4    45 0.89 FAD binding domain
Thi4                 PF01946.12   230 sp|Q5HPU1|TRMFO_STAEQ -            435   0.00094   18.3   0.0   1   1     2e-06     0.002   17.3   0.0    18    49     3    34     1    75 0.93 Thi4 family
FAD_binding_3        PF01494.14   356 sp|Q5HPU1|TRMFO_STAEQ -            435   0.00096   18.2   0.0   1   1   1.6e-06    0.0016   17.6   0.0     3    34     4    35     2    45 0.90 FAD binding domain
Pyr_redox_3          PF13738.1    203 sp|Q5HPU1|TRMFO_STAEQ -            435    0.0013   18.8   0.0   1   2   1.3e-05     0.013   15.5   0.0     2    95     7   112     6   182 0.65 Pyridine nucleotide-disulphide oxidoreductase
HI0933_like          PF03486.9    409 sp|Q5HPU1|TRMFO_STAEQ -            435    0.0016   17.0   0.7   1   3   4.5e-05     0.045   12.2   0.1     2    31     4    33     3    38 0.93 HI0933-like protein
Lycopene_cycl        PF05834.7    374 sp|Q5HPU1|TRMFO_STAEQ -            435    0.0029   16.5   0.0   1   1   3.9e-06    0.0039   16.1   0.0     3    97     6   109     4   142 0.67 Lycopene cyclase protein
FAD_oxidored         PF12831.2    428 sp|Q5HPU1|TRMFO_STAEQ -            435    0.0034   16.5   0.1   1   1   5.2e-06    0.0051   15.9   0.1     2    33     5    36     4   124 0.74 FAD dependent oxidoreductase
Shikimate_DH         PF01488.15   135 sp|Q5HPU1|TRMFO_STAEQ -            435     0.062   13.4   0.6   1   2    0.0005      0.49   10.4   0.1    13    38     3    28     1    38 0.89 Shikimate / quinate 5-dehydrogenase
ThiF                 PF00899.16   136 sp|Q5HPU1|TRMFO_STAEQ -            435     0.075   12.8   0.0   1   1   0.00017      0.16   11.7   0.0     3    27     3    27     1    36 0.90 ThiF family
SpoU_methylase       PF00588.14   142 sp|Q5HRM1|TRMHL_STAEQ -            249   8.3e-42  142.4   0.2   2   2   1.4e-44     7e-41  139.4   0.0     2   142    96   236    95   236 0.98 SpoU rRNA Methylase family
SpoU_sub_bind        PF08032.7     76 sp|Q5HRM1|TRMHL_STAEQ -            249   1.6e-19   69.8   1.1   1   2   2.5e-21   1.3e-17   63.7   0.6     2    76     6    79     5    79 0.97 RNA 2'-O ribose methyltransferase substrate binding
DUF3368              PF11848.3     48 sp|Q5HRM1|TRMHL_STAEQ -            249      0.12   11.9   0.1   2   2   9.9e-05      0.49    9.9   0.0    20    36   156   172   151   179 0.83 Domain of unknown function (DUF3368)
Trp_syntA            PF00290.15   259 sp|Q5HPG9|TRPA_STAEQ -            243   7.2e-69  231.1   0.7   1   1   3.9e-72   8.3e-69  230.9   0.7    10   242     3   228     1   242 0.93 Tryptophan synthase alpha chain
BtpA                 PF03437.10   254 sp|Q5HPG9|TRPA_STAEQ -            243   6.5e-05   22.2   0.2   1   1   6.2e-08   0.00013   21.2   0.2   179   232   164   219   114   234 0.75 BtpA family
PcrB                 PF01884.12   231 sp|Q5HPG9|TRPA_STAEQ -            243   8.9e-05   21.8   0.2   1   1   8.6e-08   0.00018   20.8   0.2   167   225   171   228   154   234 0.83 PcrB family
His_biosynth         PF00977.16   229 sp|Q5HPG9|TRPA_STAEQ -            243   0.00061   19.1   0.1   1   1   5.1e-07    0.0011   18.3   0.1    59   110   172   222   146   235 0.84 Histidine biosynthesis protein
Dus                  PF01207.12   310 sp|Q5HPG9|TRPA_STAEQ -            243     0.019   13.7   0.0   1   1   1.3e-05     0.027   13.3   0.0   150   217   152   218   104   224 0.74 Dihydrouridine synthase (Dus)
DUF561               PF04481.7    243 sp|Q5HPG9|TRPA_STAEQ -            243     0.029   13.3   0.9   2   2   8.3e-05      0.18   10.7   0.3   181   238   181   241   152   243 0.86 Protein of unknown function (DUF561)
DUF1732              PF08340.6     87 sp|Q5HPG9|TRPA_STAEQ -            243     0.054   13.3   0.0   1   1   5.9e-05      0.13   12.1   0.0    37    61    55    79    44    90 0.83 Domain of unknown function (DUF1732)
PALP                 PF00291.20   306 sp|Q5HPH0|TRPB_STAEQ -            402   4.5e-40  137.7   0.1   1   1   3.6e-44   5.3e-40  137.5   0.1     4   306    57   381    54   381 0.77 Pyridoxal-phosphate dependent enzyme
IGPS                 PF00218.16   254 sp|Q5HPH2|TRPC_STAEQ -            262   1.3e-77  260.3   1.0   1   1   4.8e-81   1.4e-77  260.1   1.0     1   252     4   251     4   253 0.96 Indole-3-glycerol phosphate synthase
QRPTase_C            PF01729.14   169 sp|Q5HPH2|TRPC_STAEQ -            262   0.00022   20.8   0.1   1   1   1.6e-07   0.00047   19.7   0.1    76   161   152   243   137   247 0.82 Quinolinate phosphoribosyl transferase, C-terminal domain
NanE                 PF04131.9    192 sp|Q5HPH2|TRPC_STAEQ -            262    0.0026   16.7   0.0   2   2   2.5e-06    0.0075   15.2   0.0    96   184   161   248   112   254 0.74 Putative N-acetylmannosamine-6-phosphate epimerase
Trp_syntA            PF00290.15   259 sp|Q5HPH2|TRPC_STAEQ -            262     0.024   13.1   0.0   3   3   9.5e-05      0.28    9.6   0.0   205   232   215   243   180   256 0.83 Tryptophan synthase alpha chain
His_biosynth         PF00977.16   229 sp|Q5HPH2|TRPC_STAEQ -            262      0.08   12.2   0.0   2   2   0.00014      0.41    9.8   0.0   189   225   206   242   159   246 0.86 Histidine biosynthesis protein
Glycos_transf_3      PF00591.16   253 sp|Q5HPH3|TRPD_STAEQ -            331   6.1e-77  258.4   2.9   1   1   5.3e-81   7.9e-77  258.0   2.9     7   252    76   322    71   323 0.97 Glycosyl transferase family, a/b domain
PRAI                 PF00697.17   197 sp|Q5HPH1|TRPF_STAEQ -            207   3.4e-34  118.1   0.1   1   1   2.6e-38   3.9e-34  117.9   0.1     1   196     3   201     3   202 0.85 N-(5'phosphoribosyl)anthranilate (PRA) isomerase
PseudoU_synth_1      PF01416.15   105 sp|Q5HM30|TRUA_STAEQ -            267   4.1e-34  117.1   0.1   1   2   1.4e-12   6.7e-09   36.1   0.3     3   105     7   103     5   103 0.93 tRNA pseudouridine synthase
PseudoU_synth_1      PF01416.15   105 sp|Q5HM30|TRUA_STAEQ -            267   4.1e-34  117.1   0.1   2   2     6e-26     3e-22   79.0   0.0     1   102   142   241   142   244 0.94 tRNA pseudouridine synthase
DUF2344              PF10105.4    187 sp|Q5HM30|TRUA_STAEQ -            267     0.045   13.2   0.0   1   1   1.3e-05     0.064   12.7   0.0    55   142    52   138    20   173 0.78 Uncharacterized protein conserved in bacteria (DUF2344)
Phage_lysozyme       PF00959.14   110 sp|Q5HM30|TRUA_STAEQ -            267     0.053   13.8   0.0   2   2   0.00011      0.52   10.6   0.0     6    83   147   224   145   227 0.93 Phage lysozyme
TruB_N               PF01509.13   149 sp|Q5HPS0|TRUB_STAEQ -            305   2.9e-56  189.7   0.6   1   1   2.9e-60   4.2e-56  189.2   0.6     1   149    24   179    24   179 0.93 TruB family pseudouridylate synthase (N terminal domain)
Pyr_redox_2          PF07992.9    201 sp|Q5HQW4|TRXB_STAEQ -            310   1.5e-29  103.3   1.7   1   1   2.1e-32   1.8e-29  103.0   1.7     1   198     7   280     7   283 0.91 Pyridine nucleotide-disulphide oxidoreductase
Pyr_redox            PF00070.22    80 sp|Q5HQW4|TRXB_STAEQ -            310   1.3e-20   73.5   0.7   1   2   0.00036      0.31   11.4   0.1     2    31     8    37     7    45 0.95 Pyridine nucleotide-disulphide oxidoreductase
Pyr_redox            PF00070.22    80 sp|Q5HQW4|TRXB_STAEQ -            310   1.3e-20   73.5   0.7   2   2   2.6e-19   2.2e-16   59.9   0.1     1    78   146   219   146   224 0.91 Pyridine nucleotide-disulphide oxidoreductase
Pyr_redox_3          PF13738.1    203 sp|Q5HQW4|TRXB_STAEQ -            310   1.6e-20   74.0   0.4   1   3     1e-08   8.8e-06   25.9   0.3     1    40     9    46     9    55 0.88 Pyridine nucleotide-disulphide oxidoreductase
Pyr_redox_3          PF13738.1    203 sp|Q5HQW4|TRXB_STAEQ -            310   1.6e-20   74.0   0.4   2   3   2.4e-13   2.1e-10   41.0   0.0    75   200    54   177    44   180 0.87 Pyridine nucleotide-disulphide oxidoreductase
FAD_oxidored         PF12831.2    428 sp|Q5HQW4|TRXB_STAEQ -            310   1.7e-10   40.6   0.6   1   3   1.3e-10   1.1e-07   31.2   0.0     1    40     7    45     7    94 0.84 FAD dependent oxidoreductase
DAO                  PF01266.19   358 sp|Q5HQW4|TRXB_STAEQ -            310   5.1e-10   38.8   0.3   1   2   7.6e-09   6.6e-06   25.2   0.1     1    36     7    42     7    46 0.94 FAD dependent oxidoreductase
DAO                  PF01266.19   358 sp|Q5HQW4|TRXB_STAEQ -            310   5.1e-10   38.8   0.3   2   2   9.7e-05     0.085   11.7   0.0   152   272    66   180    57   300 0.70 FAD dependent oxidoreductase
FAD_binding_2        PF00890.19   417 sp|Q5HQW4|TRXB_STAEQ -            310   2.6e-09   36.4   0.1   1   3     5e-09   4.4e-06   25.8   0.0     1    39     7    44     7    84 0.93 FAD binding domain
GIDA                 PF01134.17   392 sp|Q5HQW4|TRXB_STAEQ -            310   7.3e-08   31.6   1.2   1   3   3.3e-08   2.9e-05   23.1   0.0     1    30     7    44     7    73 0.82 Glucose inhibited division protein A
Thi4                 PF01946.12   230 sp|Q5HQW4|TRXB_STAEQ -            310   2.1e-07   30.2   0.1   1   1   7.4e-10   6.5e-07   28.6   0.1    16    54     4    41     1    46 0.88 Thi4 family
NAD_binding_8        PF13450.1     68 sp|Q5HQW4|TRXB_STAEQ -            310   1.1e-06   28.6   0.0   1   1   5.8e-09   5.1e-06   26.4   0.0     1    52    10    64    10    78 0.78 NAD(P)-binding Rossmann-like domain
HI0933_like          PF03486.9    409 sp|Q5HQW4|TRXB_STAEQ -            310     2e-06   26.5   3.1   1   2   4.9e-08   4.3e-05   22.1   0.7     1    32     6    37     6    43 0.92 HI0933-like protein
Lycopene_cycl        PF05834.7    374 sp|Q5HQW4|TRXB_STAEQ -            310   8.6e-06   24.9   0.1   1   2   2.7e-05     0.024   13.5   0.2     1    33     7    37     7    47 0.89 Lycopene cyclase protein
Lycopene_cycl        PF05834.7    374 sp|Q5HQW4|TRXB_STAEQ -            310   8.6e-06   24.9   0.1   2   2   0.00057      0.49    9.2   0.0    79   152    53   125    41   134 0.81 Lycopene cyclase protein
K_oxygenase          PF13434.1    341 sp|Q5HQW4|TRXB_STAEQ -            310   0.00016   20.7   0.3   2   3   0.00098      0.86    8.4   0.0   143   228    99   180    65   184 0.61 L-lysine 6-monooxygenase (NADPH-requiring)
FAD_binding_3        PF01494.14   356 sp|Q5HQW4|TRXB_STAEQ -            310   0.00018   20.6   0.4   1   2   1.2e-06     0.001   18.2   0.1     2    32     6    36     5    42 0.94 FAD binding domain
NAD_binding_7        PF13241.1    103 sp|Q5HQW4|TRXB_STAEQ -            310   0.00036   20.7   0.7   2   2   1.5e-05     0.013   15.7   0.2     5    62   142   196   141   303 0.80 Putative NAD(P)-binding
Shikimate_DH         PF01488.15   135 sp|Q5HQW4|TRXB_STAEQ -            310    0.0018   18.3   0.1   2   2   0.00099      0.86    9.6   0.0    10    74   142   208   138   238 0.78 Shikimate / quinate 5-dehydrogenase
NAD_binding_9        PF13454.1    156 sp|Q5HQW4|TRXB_STAEQ -            310     0.021   14.6   0.6   1   2   0.00088      0.77    9.5   0.1     1    45     9    47     9    72 0.81 FAD-NAD(P)-binding
FMO-like             PF00743.14   532 sp|Q5HQW4|TRXB_STAEQ -            310      0.07   11.3   0.0   2   2   0.00031      0.27    9.3   0.0   160   215   121   176    88   195 0.82 Flavin-binding monooxygenase-like
Peptidase_M22        PF00814.20   268 sp|Q5HMG7|TSAD_STAEQ -            340  6.7e-103  343.8   0.3   1   1  1.6e-106  7.8e-103  343.6   0.3     1   267    27   310    27   311 0.98 Glycoprotease family
CmcH_NodU            PF02543.10   360 sp|Q5HMG7|TSAD_STAEQ -            340    0.0064   15.6   0.0   1   1   1.9e-06    0.0095   15.1   0.0   117   210   222   314   192   328 0.68 Carbamoyltransferase
dTMP_synthase        PF02593.9    218 sp|Q5HMG7|TSAD_STAEQ -            340     0.087   12.1   0.0   1   1   3.1e-05      0.15   11.3   0.0    64   112   251   300   232   307 0.89 Thymidylate synthase
Thymidylat_synt      PF00303.14   269 sp|Q5HMP6|TYSY_STAEQ -            318  1.8e-117  391.1   3.1   1   1    2e-121    3e-117  390.4   3.1     1   269     6   318     6   318 0.99 Thymidylate synthase
MGDG_synth           PF06925.6    169 sp|Q5HQE7|UGTP_STAEQ -            391   2.9e-42  144.4   4.2   1   1   2.3e-45   3.7e-42  144.0   2.8     1   169    19   179    19   179 0.95 Monogalactosyldiacylglycerol (MGDG) synthase
Glyco_tran_28_C      PF04101.11   167 sp|Q5HQE7|UGTP_STAEQ -            391   1.7e-09   37.5   0.0   1   1   2.2e-12   3.6e-09   36.4   0.0    28   154   215   348   179   361 0.74 Glycosyltransferase family 28 C-terminal domain
Glycos_transf_1      PF00534.15   172 sp|Q5HQE7|UGTP_STAEQ -            391   5.7e-08   32.3   0.0   1   1   7.5e-11   1.2e-07   31.2   0.0     3   166   191   346   189   351 0.86 Glycosyl transferases group 1
Glyco_trans_1_3      PF13528.1    318 sp|Q5HQE7|UGTP_STAEQ -            391   4.9e-06   25.9   0.0   1   1   5.4e-09   8.9e-06   25.1   0.0     1   302     6   324     6   337 0.76 Glycosyl transferase family 1
Epimerase_2          PF02350.14   346 sp|Q5HQE7|UGTP_STAEQ -            391   0.00029   19.7   0.0   1   1   4.6e-07   0.00075   18.3   0.0   118   270   143   285   138   302 0.81 UDP-N-acetylglucosamine 2-epimerase
Glyco_trans_1_4      PF13692.1    135 sp|Q5HQE7|UGTP_STAEQ -            391    0.0015   18.6   0.0   1   1   1.8e-06     0.003   17.7   0.0     7   104   208   302   202   338 0.65 Glycosyl transferases group 1
LpxB                 PF02684.10   373 sp|Q5HQE7|UGTP_STAEQ -            391     0.034   12.7   0.0   1   1   3.4e-05     0.056   12.0   0.0   151   283   165   297   159   300 0.80 Lipid-A-disaccharide synthetase
MoCF_biosynth        PF00994.19   144 sp|Q5HQE7|UGTP_STAEQ -            391      0.13   11.6   0.0   1   1   0.00022      0.36   10.2   0.0    56   106     5    54     1    69 0.87 Probable molybdopterin binding domain
UDG                  PF03167.14   152 sp|Q5HRG5|UNG_STAEQ  -            216   1.1e-28   99.6   0.0   1   1     1e-32   1.5e-28   99.1   0.0     5   152    48   204    45   204 0.96 Uracil DNA glycosylase superfamily
YflT                 PF11181.3    103 sp|Q5HRX5|UP355_STAEQ -            135   9.4e-07   28.9   1.8   1   2   6.3e-11   9.4e-07   28.9   1.8     2   102     3   100     2   101 0.90 Heat induced stress protein YflT
BacA                 PF02673.13   259 sp|Q5HR54|UPPP_STAEQ -            290   2.8e-76  256.1  11.9   1   1   2.2e-80   3.2e-76  255.9  11.9     2   258     9   276     8   277 0.95 Bacitracin resistance protein BacA
UPRTase              PF14681.1    207 sp|Q5HMB1|UPP_STAEQ  -            209     7e-78  260.5   0.0   1   1   1.1e-81     8e-78  260.3   0.0     1   207     6   208     6   208 0.98 Uracil phosphoribosyltransferase
Pribosyltran         PF00156.22   125 sp|Q5HMB1|UPP_STAEQ  -            209   2.8e-12   46.4   0.2   1   1   5.5e-16   4.1e-12   45.9   0.2    15   125    61   161    34   161 0.92 Phosphoribosyl transferase domain
Amidohydro_1         PF01979.15   333 sp|Q5HLW1|URE1_STAEQ -            571   1.9e-62  211.8   9.0   1   1     8e-66   2.4e-62  211.5   9.0     1   333   129   440   129   440 0.96 Amidohydrolase family
Urease_alpha         PF00449.15   121 sp|Q5HLW1|URE1_STAEQ -            571   3.3e-50  169.2   3.2   1   1   2.8e-53   8.4e-50  167.9   3.2     2   121     4   123     3   123 0.97 Urease alpha-subunit, N-terminal domain
Amidohydro_5         PF13594.1     68 sp|Q5HLW1|URE1_STAEQ -            571     3e-07   30.1   9.0   1   1   7.8e-10   2.3e-06   27.3   9.0     1    67    90   157    90   217 0.79 Amidohydrolase
Amidohydro_4         PF13147.1    304 sp|Q5HLW1|URE1_STAEQ -            571   2.4e-05   24.5   3.9   1   2   9.8e-08   0.00029   20.9   4.1     2   132   125   281   124   365 0.85 Amidohydrolase
Amidohydro_3         PF07969.6    404 sp|Q5HLW1|URE1_STAEQ -            571   0.00036   19.8   8.3   2   3   7.4e-06     0.022   13.9   2.5   365   404   382   438   199   438 0.60 Amidohydrolase family
Urease_beta          PF00699.15   100 sp|Q5HLW2|URE2_STAEQ -            133   7.6e-47  157.2   0.1   1   1   1.9e-50   9.6e-47  156.9   0.1     1    99     2   100     2   101 0.99 Urease beta subunit
PapD_N               PF00345.15   122 sp|Q5HLW2|URE2_STAEQ -            133     0.006   16.3   0.1   1   2   3.7e-06     0.018   14.7   0.0     2    71     6    82     5    90 0.72 Pili and flagellar-assembly chaperone, PapD N-terminal domain
THUMP                PF02926.12   144 sp|Q5HLW2|URE2_STAEQ -            133     0.076   12.9   0.6   1   2   6.2e-05      0.31   10.9   0.3   109   132     4    27     3    38 0.91 THUMP domain
Urease_gamma         PF00547.13    99 sp|Q5HLW3|URE3_STAEQ -            100   9.3e-48  160.3   0.5   1   1   6.9e-52     1e-47  160.1   0.5     1    99     1    99     1    99 1.00 Urease, gamma subunit
UreD                 PF01774.12   209 sp|Q5HLV7|URED_STAEQ -            278   2.3e-50  170.9   0.0   1   1   1.9e-54   2.8e-50  170.7   0.0     2   208    48   255    47   256 0.95 UreD urease accessory protein
UreE_N               PF02814.10    65 sp|Q5HLW0|UREE_STAEQ -            150   1.9e-17   62.5   0.0   1   1     6e-21     3e-17   61.8   0.0     4    65    12    71     6    71 0.87 UreE urease accessory protein, N-terminal domain
UreE_C               PF05194.7     87 sp|Q5HLW0|UREE_STAEQ -            150   1.9e-16   59.9   0.1   1   1   6.9e-20   3.4e-16   59.1   0.1     2    78    78   149    77   150 0.89 UreE urease accessory protein, C-terminal domain
PET122               PF05476.6    267 sp|Q5HLW0|UREE_STAEQ -            150     0.025   13.8   0.0   1   1   5.1e-06     0.025   13.8   0.0    70   109    75   114    22   140 0.87 PET122
UreF                 PF01730.11   146 sp|Q5HLV9|UREF_STAEQ -            229   3.1e-32  111.7   0.0   1   1   7.5e-36   3.7e-32  111.4   0.0     2   143    37   186    36   189 0.98 UreF
Lipase_3             PF01764.20   141 sp|Q5HLV9|UREF_STAEQ -            229     0.048   13.2   0.0   1   1   1.4e-05     0.067   12.7   0.0    30   103    94   176    64   202 0.80 Lipase (class 3)
MNE1                 PF13762.1    145 sp|Q5HLV9|UREF_STAEQ -            229     0.075   13.1   2.1   2   2   1.6e-05     0.078   13.0   0.6   102   142   121   161   118   164 0.94 Mitochondrial splicing apparatus component
cobW                 PF02492.14   178 sp|Q5HLV8|UREG_STAEQ -            204   5.2e-40  136.7   0.0   1   1   6.9e-43     6e-40  136.5   0.0     3   175     7   175     5   178 0.94 CobW/HypB/UreG, nucleotide-binding domain
NTPase_1             PF03266.10   168 sp|Q5HLV8|UREG_STAEQ -            204   0.00073   19.2   0.5   1   1   1.8e-06    0.0016   18.1   0.5     1    39     6    42     6    53 0.81 NTPase
Zeta_toxin           PF06414.7    201 sp|Q5HLV8|UREG_STAEQ -            204    0.0013   17.8   0.1   1   1   2.2e-06    0.0019   17.3   0.1    15    52     3    41     1    49 0.82 Zeta toxin
AAA_17               PF13207.1    121 sp|Q5HLV8|UREG_STAEQ -            204    0.0039   17.9   0.3   1   1   7.9e-06    0.0069   17.1   0.2     1    35     6    44     6   131 0.62 AAA domain
AAA_18               PF13238.1    129 sp|Q5HLV8|UREG_STAEQ -            204    0.0069   16.6   0.5   1   1   1.2e-05      0.01   16.1   0.5     1    34     7    46     7   124 0.81 AAA domain
ArgK                 PF03308.11   267 sp|Q5HLV8|UREG_STAEQ -            204    0.0084   14.9   0.9   1   2   0.00014      0.12   11.1   0.2    30    63     5    37     2    44 0.84 ArgK protein
KAP_NTPase           PF07693.9    325 sp|Q5HLV8|UREG_STAEQ -            204    0.0087   15.0   0.0   1   1     1e-05    0.0087   15.0   0.0    18    66     2    93     1   184 0.83 KAP family P-loop domain
AAA_19               PF13245.1     76 sp|Q5HLV8|UREG_STAEQ -            204     0.034   13.9   0.0   1   1    0.0001     0.091   12.5   0.1    15    36     9    33     2    54 0.73 Part of AAA domain
GTP_EFTU             PF00009.22   188 sp|Q5HLV8|UREG_STAEQ -            204     0.037   13.4   0.1   1   2   0.00043      0.37   10.1   0.0     3    32     4    33     2   102 0.86 Elongation factor Tu GTP binding domain
MMR_HSR1             PF01926.18   116 sp|Q5HLV8|UREG_STAEQ -            204      0.06   13.3   0.1   1   1   9.3e-05     0.081   12.8   0.1     1    83     6    98     6   169 0.69 50S ribosome-binding GTPase
MobB                 PF03205.9    140 sp|Q5HLV8|UREG_STAEQ -            204     0.061   13.0   0.4   1   1   0.00016      0.14   11.8   0.4     4    27     8    31     5    45 0.82 Molybdopterin guanine dinucleotide synthesis protein B
AAA_16               PF13191.1    185 sp|Q5HLV8|UREG_STAEQ -            204     0.077   12.9   0.0   1   1   0.00015      0.13   12.2   0.0    30    63    10    44     7    64 0.87 AAA ATPase domain
Arch_ATPase          PF01637.13   234 sp|Q5HLV8|UREG_STAEQ -            204      0.08   12.6   0.1   1   1   0.00013      0.12   12.1   0.1    25    59     9    43     4   100 0.81 Archaeal ATPase
RNA_helicase         PF00910.17   107 sp|Q5HLV8|UREG_STAEQ -            204     0.091   12.9   0.0   1   1   0.00018      0.16   12.1   0.0     3    38     9    45     7    74 0.84 RNA helicase
ABC_tran             PF00005.22   137 sp|Q5HLV8|UREG_STAEQ -            204     0.096   12.9   0.0   1   1   0.00017      0.15   12.3   0.0    13    67     6    59     2   118 0.74 ABC transporter
AAA_33               PF13671.1    143 sp|Q5HLV8|UREG_STAEQ -            204      0.11   12.4   0.0   1   1   0.00021      0.19   11.6   0.0     6    31    11    40     7    63 0.80 AAA domain
Miro                 PF08477.8    119 sp|Q5HLV8|UREG_STAEQ -            204      0.15   12.5   0.5   1   1   0.00036      0.31   11.5   0.4     1    41     6    44     6   147 0.83 Miro-like protein
PRK                  PF00485.13   194 sp|Q5HNT9|URK_STAEQ  -            207   6.5e-47  159.6   0.2   1   1   1.7e-49   7.5e-47  159.4   0.2     1   193     6   191     6   192 0.95 Phosphoribulokinase / Uridine kinase family
AAA_18               PF13238.1    129 sp|Q5HNT9|URK_STAEQ  -            207   2.2e-10   40.9   0.2   1   1   8.4e-13   3.8e-10   40.1   0.2     1   123     7   156     7   162 0.74 AAA domain
AAA_17               PF13207.1    121 sp|Q5HNT9|URK_STAEQ  -            207   1.1e-08   35.8   0.3   1   1   5.2e-11   2.4e-08   34.8   0.3     1   120     6   154     6   155 0.68 AAA domain
CoaE                 PF01121.15   180 sp|Q5HNT9|URK_STAEQ  -            207   8.7e-05   21.9   1.1   1   2   5.7e-05     0.026   13.9   0.1     2    22     6    26     5    47 0.83 Dephospho-CoA kinase
CbiA                 PF01656.18   195 sp|Q5HNT9|URK_STAEQ  -            207   0.00016   21.1   0.0   1   1   5.2e-07   0.00023   20.6   0.0     4   120     9   129     6   185 0.77 CobQ/CobB/MinD/ParA nucleotide binding domain
ABC_tran             PF00005.22   137 sp|Q5HNT9|URK_STAEQ  -            207   0.00018   21.7   0.2   1   1   5.1e-07   0.00023   21.4   0.2     9    68     2    61     1   160 0.77 ABC transporter
AAA_26               PF13500.1    199 sp|Q5HNT9|URK_STAEQ  -            207   0.00093   18.8   0.0   1   1   2.8e-06    0.0012   18.4   0.0     9   132    12   136     4   173 0.76 AAA domain
MobB                 PF03205.9    140 sp|Q5HNT9|URK_STAEQ  -            207     0.001   18.7   0.6   1   3   0.00012     0.056   13.1   0.0     2    31     6    33     5    49 0.85 Molybdopterin guanine dinucleotide synthesis protein B
cobW                 PF02492.14   178 sp|Q5HNT9|URK_STAEQ  -            207    0.0011   18.4   0.0   1   1   3.5e-06    0.0016   17.9   0.0     2    47     6    48     5   138 0.76 CobW/HypB/UreG, nucleotide-binding domain
Thymidylate_kin      PF02223.12   186 sp|Q5HNT9|URK_STAEQ  -            207    0.0013   18.1   0.6   1   2   0.00054      0.24   10.7   0.1     2    24    10    32     9    39 0.85 Thymidylate kinase
T2SE                 PF00437.15   272 sp|Q5HNT9|URK_STAEQ  -            207    0.0014   17.6   3.5   1   2   5.6e-06    0.0025   16.7   0.5   129   155     5    31     1    40 0.82 Type II/IV secretion system protein
AAA_16               PF13191.1    185 sp|Q5HNT9|URK_STAEQ  -            207    0.0015   18.5   0.0   1   1   5.9e-06    0.0026   17.7   0.0    26    64     6    45     2    64 0.75 AAA ATPase domain
ArgK                 PF03308.11   267 sp|Q5HNT9|URK_STAEQ  -            207    0.0017   17.2   0.0   1   1   6.5e-06    0.0029   16.4   0.0    28    66     3    39     1    45 0.92 ArgK protein
FtsK_SpoIIIE         PF01580.13   205 sp|Q5HNT9|URK_STAEQ  -            207    0.0018   17.8   1.2   1   1   8.9e-06     0.004   16.6   0.1    43    77     9    39     4    49 0.85 FtsK/SpoIIIE family
AAA_28               PF13521.1    163 sp|Q5HNT9|URK_STAEQ  -            207    0.0064   16.4   0.0   1   1   2.7e-05     0.012   15.5   0.0     3    67     8    76     6    93 0.71 AAA domain
Zeta_toxin           PF06414.7    201 sp|Q5HNT9|URK_STAEQ  -            207    0.0064   15.6   0.0   1   1   3.1e-05     0.014   14.4   0.0    18    53     6    41     2    97 0.87 Zeta toxin
AAA_19               PF13245.1     76 sp|Q5HNT9|URK_STAEQ  -            207    0.0071   16.0   0.2   1   1   3.3e-05     0.015   15.0   0.2    15    49     9    37     3    40 0.84 Part of AAA domain
RNA_helicase         PF00910.17   107 sp|Q5HNT9|URK_STAEQ  -            207    0.0078   16.3   0.0   1   1   4.2e-05     0.019   15.1   0.0     3    38     9    44     7    57 0.83 RNA helicase
AAA_33               PF13671.1    143 sp|Q5HNT9|URK_STAEQ  -            207    0.0087   15.9   0.4   1   1   3.5e-05     0.016   15.0   0.4     5    38    10    46     6   167 0.80 AAA domain
AAA_21               PF13304.1    303 sp|Q5HNT9|URK_STAEQ  -            207    0.0096   15.9   0.0   1   1   2.6e-05     0.012   15.6   0.0     2    94     7   119     6   163 0.84 AAA domain
AAA_29               PF13555.1     62 sp|Q5HNT9|URK_STAEQ  -            207     0.012   15.1   0.5   1   1   5.3e-05     0.024   14.1   0.5    27    45     8    26     1    36 0.81 P-loop containing region of AAA domain
APS_kinase           PF01583.15   157 sp|Q5HNT9|URK_STAEQ  -            207     0.017   14.7   0.1   1   1   8.8e-05     0.039   13.5   0.0     3    35     5    35     3    57 0.79 Adenylylsulphate kinase
NTPase_1             PF03266.10   168 sp|Q5HNT9|URK_STAEQ  -            207     0.019   14.6   0.4   1   1   7.1e-05     0.032   13.9   0.2     2    29     7    34     6   125 0.86 NTPase
DUF2075              PF09848.4    352 sp|Q5HNT9|URK_STAEQ  -            207     0.033   13.1   0.2   1   1   0.00016     0.071   12.0   0.1     3    55     6    58     4   109 0.72 Uncharacterized conserved protein (DUF2075)
NB-ARC               PF00931.17   287 sp|Q5HNT9|URK_STAEQ  -            207     0.037   12.8   1.2   1   1   0.00012     0.056   12.3   1.2    18    42     3    27     1    33 0.89 NB-ARC domain
UPF0079              PF02367.12   123 sp|Q5HNT9|URK_STAEQ  -            207     0.038   13.6   0.2   1   1    0.0004      0.18   11.4   0.1    14    41     3    31     1    41 0.86 Uncharacterised P-loop hydrolase UPF0079
ATP-synt_ab          PF00006.20   215 sp|Q5HNT9|URK_STAEQ  -            207     0.042   13.3   0.0   1   1   0.00012     0.053   13.0   0.0    18    63     7   160     2   193 0.88 ATP synthase alpha/beta family, nucleotide-binding domain
AAA_10               PF12846.2    304 sp|Q5HNT9|URK_STAEQ  -            207     0.042   13.2   0.6   1   1   0.00017     0.076   12.4   0.5     6    36     9    39     5   182 0.87 AAA-like domain
MMR_HSR1             PF01926.18   116 sp|Q5HNT9|URK_STAEQ  -            207     0.069   13.1   0.1   1   1    0.0003      0.13   12.1   0.1     2    37     7    96     6   183 0.69 50S ribosome-binding GTPase
AAA_30               PF13604.1    196 sp|Q5HNT9|URK_STAEQ  -            207     0.095   12.2   0.1   1   1   0.00048      0.22   11.1   0.1    18    53     4    37     1    46 0.81 AAA domain
DUF258               PF03193.11   161 sp|Q5HNT9|URK_STAEQ  -            207      0.11   11.6   0.0   1   1    0.0003      0.14   11.3   0.0    36    60     5    29     1    97 0.87 Protein of unknown function, DUF258
AAA_23               PF13476.1    202 sp|Q5HNT9|URK_STAEQ  -            207      0.12   12.7   1.3   1   1   0.00043      0.19   12.0   1.3    21    73     6    56     3   199 0.63 AAA domain
AAA_22               PF13401.1    131 sp|Q5HNT9|URK_STAEQ  -            207      0.13   12.3   0.4   1   1   0.00048      0.22   11.6   0.3     4    30     4    30     1   134 0.79 AAA domain
UDPGP                PF01704.13   420 sp|Q5HM59|URTF_STAEQ -            395   5.3e-39  133.9   1.2   1   1   2.7e-42   7.9e-39  133.3   1.0    46   345    83   376    39   382 0.84 UTP--glucose-1-phosphate uridylyltransferase
NTP_transf_3         PF12804.2    160 sp|Q5HM59|URTF_STAEQ -            395    0.0019   18.2   0.0   1   1   9.9e-07    0.0029   17.6   0.0     2    38    97   135    96   215 0.85 MobA-like NTP transferase domain
DUF4301              PF14134.1    513 sp|Q5HM59|URTF_STAEQ -            395    0.0053   15.3   0.7   2   2   1.8e-06    0.0053   15.3   0.7   220   298   154   241   145   261 0.80 Domain of unknown function (DUF4301)
Aminotran_4          PF01063.14   231 sp|Q5HM59|URTF_STAEQ -            395     0.067   12.6   0.0   1   1   3.8e-05      0.11   11.9   0.0    51   144   100   205    70   213 0.75 Aminotransferase class IV
DUF763               PF05559.6    319 sp|Q5HM59|URTF_STAEQ -            395      0.12   11.3   0.5   1   1   7.1e-05      0.21   10.5   0.5   237   308    11    82     2    89 0.81 Protein of unknown function (DUF763)
ABC_tran             PF00005.22   137 sp|Q5HQW9|UVRA_STAEQ -            944     1e-20   74.4   0.3   1   3   0.00013     0.059   13.6   0.0     1    28    16    43    16   142 0.92 ABC transporter
ABC_tran             PF00005.22   137 sp|Q5HQW9|UVRA_STAEQ -            944     1e-20   74.4   0.3   2   3   3.2e-05     0.014   15.6   0.0    80   136   458   516   380   517 0.76 ABC transporter
ABC_tran             PF00005.22   137 sp|Q5HQW9|UVRA_STAEQ -            944     1e-20   74.4   0.3   3   3   2.7e-12   1.2e-09   38.5   0.2     1   136   622   858   622   859 0.75 ABC transporter
SMC_N                PF02463.14   220 sp|Q5HQW9|UVRA_STAEQ -            944   3.6e-13   49.2   2.8   2   3   1.8e-05    0.0082   15.3   0.0   105   211   173   560   126   566 0.80 RecF/RecN/SMC N terminal domain
SMC_N                PF02463.14   220 sp|Q5HQW9|UVRA_STAEQ -            944   3.6e-13   49.2   2.8   3   3   3.9e-07   0.00017   20.8   0.8     4   210   611   901   610   907 0.80 RecF/RecN/SMC N terminal domain
AAA_23               PF13476.1    202 sp|Q5HQW9|UVRA_STAEQ -            944   1.4e-07   32.0   5.1   1   3    0.0002     0.089   13.1   0.0     2    35     6    42     5    48 0.85 AAA domain
AAA_23               PF13476.1    202 sp|Q5HQW9|UVRA_STAEQ -            944   1.4e-07   32.0   5.1   3   3   8.9e-06     0.004   17.5   0.3     1    54   611   675   611   839 0.65 AAA domain
AAA_21               PF13304.1    303 sp|Q5HQW9|UVRA_STAEQ -            944   3.8e-07   30.3  11.3   1   3   5.6e-05     0.025   14.5   0.4   169   294   440   543   413   549 0.73 AAA domain
AAA_21               PF13304.1    303 sp|Q5HQW9|UVRA_STAEQ -            944   3.8e-07   30.3  11.3   3   3   3.1e-05     0.014   15.3   0.0   236   293   827   884   778   894 0.83 AAA domain
AAA_29               PF13555.1     62 sp|Q5HQW9|UVRA_STAEQ -            944   7.7e-07   28.5   0.4   1   2   0.00033      0.15   11.6   0.0    13    39    17    42    13    49 0.78 P-loop containing region of AAA domain
AAA_29               PF13555.1     62 sp|Q5HQW9|UVRA_STAEQ -            944   7.7e-07   28.5   0.4   2   2   4.7e-05     0.021   14.3   0.1    18    41   628   650   620   665 0.74 P-loop containing region of AAA domain
AAA_16               PF13191.1    185 sp|Q5HQW9|UVRA_STAEQ -            944   9.4e-07   28.9   0.1   2   2   3.4e-06    0.0015   18.5   0.0    26    62   634   673   622   695 0.80 AAA ATPase domain
DUF258               PF03193.11   161 sp|Q5HQW9|UVRA_STAEQ -            944   3.4e-06   26.3   0.3   1   2    0.0015      0.66    9.1   0.0    25    52    15    43     3    63 0.77 Protein of unknown function, DUF258
DUF258               PF03193.11   161 sp|Q5HQW9|UVRA_STAEQ -            944   3.4e-06   26.3   0.3   2   2   2.8e-05     0.013   14.7   0.1    36    59   633   656   601   671 0.70 Protein of unknown function, DUF258
AAA_14               PF13173.1    128 sp|Q5HQW9|UVRA_STAEQ -            944   1.8e-05   24.6   0.1   2   2   0.00044       0.2   11.5   0.0     5    41   635   675   632   722 0.76 AAA domain
DnaJ_CXXCXGXG        PF00684.14    66 sp|Q5HQW9|UVRA_STAEQ -            944   2.5e-05   24.2   3.8   3   3   3.9e-05     0.018   15.1   0.2    16    52   736   769   726   774 0.85 DnaJ central domain
AAA_33               PF13671.1    143 sp|Q5HQW9|UVRA_STAEQ -            944   2.5e-05   24.1   0.0   1   2   0.00069      0.31   10.9   0.0     1    17    28    44    28    98 0.85 AAA domain
AAA_33               PF13671.1    143 sp|Q5HQW9|UVRA_STAEQ -            944   2.5e-05   24.1   0.0   2   2    0.0021      0.95    9.3   0.0     1    27   634   660   634   723 0.80 AAA domain
AAA_22               PF13401.1    131 sp|Q5HQW9|UVRA_STAEQ -            944   2.7e-05   24.3   0.4   2   2   0.00049      0.22   11.6   0.0     7    33   635   661   632   689 0.84 AAA domain
AAA_10               PF12846.2    304 sp|Q5HQW9|UVRA_STAEQ -            944   3.1e-05   23.5   0.1   2   2   1.8e-05    0.0079   15.6   0.0     3    29   634   660   632   727 0.86 AAA-like domain
AAA_17               PF13207.1    121 sp|Q5HQW9|UVRA_STAEQ -            944   0.00027   21.7   2.7   2   2    0.0016      0.73   10.6   0.0     3    19   636   652   634   771 0.84 AAA domain
APS_kinase           PF01583.15   157 sp|Q5HQW9|UVRA_STAEQ -            944   0.00071   19.2   0.1   1   2    0.0022      0.99    9.0   0.0     4    21    28    45    25    59 0.84 Adenylylsulphate kinase
Arch_ATPase          PF01637.13   234 sp|Q5HQW9|UVRA_STAEQ -            944     0.002   17.8   0.0   2   2   0.00051      0.23   11.1   0.0    22    67   634   679   627   720 0.78 Archaeal ATPase
BCA_ABC_TP_C         PF12399.3     23 sp|Q5HQW9|UVRA_STAEQ -            944    0.0021   17.6   0.1   2   2   8.4e-05     0.038   13.6   0.2     2    14   913   925   912   926 0.90 Branched-chain amino acid ATP-binding cassette transporter
DUF2075              PF09848.4    352 sp|Q5HQW9|UVRA_STAEQ -            944    0.0037   16.2   0.2   2   2   0.00042      0.19   10.6   0.1     2    26   633   659   632   679 0.77 Uncharacterized conserved protein (DUF2075)
MMR_HSR1             PF01926.18   116 sp|Q5HQW9|UVRA_STAEQ -            944    0.0039   17.1   2.2   2   2   0.00044       0.2   11.6   0.1     3    33   636   670   634   696 0.75 50S ribosome-binding GTPase
Zeta_toxin           PF06414.7    201 sp|Q5HQW9|UVRA_STAEQ -            944    0.0047   16.0   0.0   1   2     0.002      0.91    8.5   0.0    14    37    24    47    12    62 0.80 Zeta toxin
NACHT                PF05729.7    166 sp|Q5HQW9|UVRA_STAEQ -            944    0.0048   16.5   0.0   2   2   0.00054      0.24   11.0   0.0     3    32   635   664   633   671 0.87 NACHT domain
Miro                 PF08477.8    119 sp|Q5HQW9|UVRA_STAEQ -            944    0.0079   16.6   0.9   2   2     0.002       0.9   10.0   0.1     3    31   636   664   635   691 0.74 Miro-like protein
Viral_helicase1      PF01443.13   234 sp|Q5HQW9|UVRA_STAEQ -            944    0.0099   15.4   0.1   2   2    0.0005      0.23   10.9   0.1     1    22   635   656   635   678 0.82 Viral (Superfamily 1) RNA helicase
cobW                 PF02492.14   178 sp|Q5HQW9|UVRA_STAEQ -            944     0.011   15.2   0.4   2   2    0.0005      0.22   10.9   0.1     2    22   634   654   633   676 0.82 CobW/HypB/UreG, nucleotide-binding domain
AAA_15               PF13175.1    415 sp|Q5HQW9|UVRA_STAEQ -            944     0.017   14.1   9.8   3   3   0.00079      0.35    9.8   0.0   365   406   839   884   769   893 0.81 AAA ATPase domain
MobB                 PF03205.9    140 sp|Q5HQW9|UVRA_STAEQ -            944     0.041   13.5   1.9   2   2    0.0013      0.59    9.8   0.2     4    30   636   662   633   671 0.87 Molybdopterin guanine dinucleotide synthesis protein B
UvrB                 PF12344.3     44 sp|Q5HQX0|UVRB_STAEQ -            661   3.1e-25   87.4   4.3   1   1     1e-27   9.4e-25   85.8   4.3     1    44   553   596   553   596 0.98 Ultra-violet resistance protein B
Helicase_C           PF00271.26    78 sp|Q5HQX0|UVRB_STAEQ -            661   7.6e-18   64.1   1.0   1   2   8.9e-20   8.3e-17   60.8   0.1     2    77   466   546   465   547 0.97 Helicase conserved C-terminal domain
ResIII               PF04851.10   184 sp|Q5HQX0|UVRB_STAEQ -            661   1.6e-13   50.8   5.1   1   2   6.3e-16   5.9e-13   49.0   0.0     2   111    13   120    12   148 0.85 Type III restriction enzyme, res subunit
UVR                  PF02151.14    36 sp|Q5HQX0|UVRB_STAEQ -            661   1.2e-08   34.2   6.2   1   1   1.3e-11   1.2e-08   34.2   6.2     2    35   626   659   625   660 0.94 UvrB/uvrC motif
DEAD                 PF00270.24   169 sp|Q5HQX0|UVRB_STAEQ -            661   9.8e-06   25.1   0.1   1   2   4.2e-07   0.00039   19.9   0.0     4    76    19    89    17   129 0.80 DEAD/DEAH box helicase
Kinesin              PF00225.18   335 sp|Q5HQX0|UVRB_STAEQ -            661    0.0012   17.6   0.1   1   2   1.3e-06    0.0012   17.6   0.1    52   137    16    99     2   104 0.63 Kinesin motor domain
AAA_30               PF13604.1    196 sp|Q5HQX0|UVRB_STAEQ -            661     0.006   16.1   0.6   1   2   5.4e-05      0.05   13.1   0.0     5    65    18    78    16    96 0.81 AAA domain
AAA                  PF00004.24   132 sp|Q5HQX0|UVRB_STAEQ -            661    0.0061   16.7   0.0   1   1   0.00015      0.13   12.4   0.0     3    46    39    79    38   148 0.77 ATPase family associated with various cellular activities (AAA)
DUF106               PF01956.11   168 sp|Q5HQX0|UVRB_STAEQ -            661     0.034   13.6   6.2   1   2   0.00044      0.41   10.1   0.0    29    85   243   302   240   391 0.83 Integral membrane protein DUF106
DUF87                PF01935.12   229 sp|Q5HQX0|UVRB_STAEQ -            661     0.066   13.0   0.2   1   2   7.2e-05     0.066   13.0   0.2    23    47    34    58    24    67 0.87 Domain of unknown function DUF87
AAA_25               PF13481.1    194 sp|Q5HQX0|UVRB_STAEQ -            661     0.098   12.0   0.1   1   1   0.00039      0.36   10.1   0.0    17    57    18    58     6    77 0.82 AAA domain
DUF853               PF05872.7    504 sp|Q5HQX0|UVRB_STAEQ -            661      0.35    9.1   5.4   1   2   7.3e-05     0.068   11.5   0.2    11    44    24    57    14    70 0.80 Bacterial protein of unknown function (DUF853)
TrwB_AAD_bind        PF10412.4    386 sp|Q5HQX0|UVRB_STAEQ -            661       2.4    6.6   8.0   1   2   0.00011       0.1   11.1   0.2    13    40    32    59    21    81 0.82 Type IV secretion-system coupling protein DNA-binding domain
DUF607               PF04678.8    180 sp|Q5HQX0|UVRB_STAEQ -            661       4.1    7.2   8.5   1   1   0.00079      0.73    9.7   3.0    21    88   571   640   543   655 0.75 Protein of unknown function, DUF607
UvrC_HhH_N           PF08459.6    155 sp|Q5HQ28|UVRC_STAEQ -            594   2.5e-55  186.2   0.0   1   1   2.3e-58   4.9e-55  185.3   0.0     6   155   377   526   372   526 0.96 UvrC Helix-hairpin-helix N-terminal
GIY-YIG              PF01541.19    80 sp|Q5HQ28|UVRC_STAEQ -            594   2.3e-11   43.8   2.1   1   2   3.2e-14   6.8e-11   42.3   0.1     2    80    19    93    18    93 0.89 GIY-YIG catalytic domain
UVR                  PF02151.14    36 sp|Q5HQ28|UVRC_STAEQ -            594   7.1e-10   38.0   0.5   2   2   3.4e-13   7.1e-10   38.0   0.5     3    35   201   233   199   234 0.92 UvrB/uvrC motif
HHH_2                PF12826.2     64 sp|Q5HQ28|UVRC_STAEQ -            594    0.0093   15.8   0.1   1   1   1.9e-05      0.04   13.8   0.0     8    57   545   593   544   594 0.86 Helix-hairpin-helix motif
5_3_exonuc           PF01367.15   101 sp|Q5HQ28|UVRC_STAEQ -            594     0.035   14.3   0.1   1   1   1.7e-05     0.035   14.3   0.1    23    68   545   591   542   594 0.88 5'-3' exonuclease, C-terminal SAM fold
FG-GAP_2             PF14312.1     49 sp|Q5HQ28|UVRC_STAEQ -            594      0.11   12.5   0.0   1   1   9.6e-05       0.2   11.6   0.0     2    23   235   256   234   257 0.94 FG-GAP repeat
DUF1104              PF06518.6     93 sp|Q5HQ28|UVRC_STAEQ -            594      0.42   10.7   4.6   1   1   0.00034      0.72   10.0   1.5    21    86   181   244   173   249 0.77 Protein of unknown function (DUF1104)
AMP-binding          PF00501.23   417 sp|Q5HRH4|VRAA_STAEQ -            453   1.5e-51  175.1   0.0   1   1   5.3e-55     2e-51  174.7   0.0     4   416    11   356     8   357 0.84 AMP-binding enzyme
AMP-binding_C        PF13193.1     73 sp|Q5HRH4|VRAA_STAEQ -            453   0.00037   21.3   0.0   1   1   2.1e-07   0.00077   20.3   0.0     2    73   366   438   365   438 0.84 AMP-binding enzyme C-terminal domain
AMP-binding_C_2      PF14535.1     96 sp|Q5HRH4|VRAA_STAEQ -            453     0.036   14.0   0.1   1   1   2.3e-05     0.084   12.9   0.1     1    25   358   382   358   447 0.90 AMP-binding enzyme C-terminal domain
RNA_pol_Rpb1_4       PF05000.12   108 sp|Q5HRH4|VRAA_STAEQ -            453      0.26   11.0   3.4   1   3   0.00021      0.79    9.4   0.2    37    77   222   261   195   284 0.75 RNA polymerase Rpb1, domain 4
Thiolase_N           PF00108.18   264 sp|Q5HRH3|VRAB_STAEQ -            382   2.5e-58  197.1   0.0   1   1   7.2e-62   3.6e-58  196.6   0.0     1   263     1   251     1   252 0.93 Thiolase, N-terminal domain
Thiolase_C           PF02803.13   123 sp|Q5HRH3|VRAB_STAEQ -            382   1.7e-32  111.4   0.2   1   1   6.2e-36     3e-32  110.6   0.2     7   123   265   378   260   378 0.93 Thiolase, C-terminal domain
ketoacyl-synt        PF00109.21   254 sp|Q5HRH3|VRAB_STAEQ -            382   0.00063   19.3   0.0   1   1   2.5e-07    0.0012   18.3   0.0   163   206    73   116    62   122 0.91 Beta-ketoacyl synthase, N-terminal domain
LAGLIDADG_WhiA       PF14527.1     93 sp|Q5HQW1|WHIA_STAEQ -            314   5.9e-37  125.4   2.9   2   2   1.9e-38   4.7e-35  119.3   0.1     2    93   124   216   123   216 0.99 WhiA LAGLIDADG-like domain
HTH_WhiA             PF02650.9     85 sp|Q5HQW1|WHIA_STAEQ -            314   1.8e-35  121.2   0.6   1   1   2.4e-38   5.9e-35  119.5   0.6     1    84   219   303   219   304 0.98 WhiA C-terminal HTH domain
WhiA_N               PF10298.4     86 sp|Q5HQW1|WHIA_STAEQ -            314   1.1e-33  114.9   3.9   1   1   9.6e-37   2.4e-33  113.8   3.9     2    86    19   103    18   103 0.97 WhiA N-terminal LAGLIDADG-like domain
Sec8_exocyst         PF04048.9    142 sp|Q5HQW1|WHIA_STAEQ -            314    0.0033   17.0   2.3   2   3   3.5e-05     0.085   12.4   0.2    86   141   207   262   188   263 0.91 Sec8 exocyst complex component specific domain
Sigma70_r4           PF04545.11    50 sp|Q5HQW1|WHIA_STAEQ -            314     0.024   13.9   0.1   1   1   2.1e-05     0.053   12.8   0.1     2    29   253   281   252   284 0.94 Sigma-70, region 4
LAGLIDADG_3          PF14528.1     77 sp|Q5HQW1|WHIA_STAEQ -            314     0.079   13.2   2.3   2   2   0.00011      0.28   11.4   0.2     1    77   124   198   124   198 0.80 LAGLIDADG-like domain
Phage_integrase      PF00589.17   173 sp|Q5HPU0|XERC_STAEQ -            296     1e-45  155.4   0.0   1   1   5.2e-49   1.9e-45  154.6   0.0     2   172   109   279   108   280 0.96 Phage integrase family
Phage_int_SAM_1      PF02899.12    84 sp|Q5HPU0|XERC_STAEQ -            296   1.4e-15   57.1   5.1   1   2   1.1e-18     4e-15   55.7   3.9     3    81     7    84     4    87 0.95 Phage integrase, N-terminal SAM-like domain
Phage_int_SAM_4      PF13495.1     85 sp|Q5HPU0|XERC_STAEQ -            296   7.4e-08   32.6   6.1   1   2     7e-11   2.6e-07   30.8   4.6     8    81    11    86     4    90 0.87 Phage integrase, N-terminal SAM-like domain
Peptidase_C30        PF05409.8    293 sp|Q5HPU0|XERC_STAEQ -            296      0.12   11.3   0.1   1   2   0.00012      0.46    9.5   0.1   130   190     7    69     1    95 0.77 Coronavirus  endopeptidase C30
Phage_integrase      PF00589.17   173 sp|Q5HP53|XERD_STAEQ -            295   4.7e-51  172.8   1.0   1   1   1.8e-54   5.3e-51  172.7   0.3     2   172   110   282   109   283 0.97 Phage integrase family
Phage_int_SAM_1      PF02899.12    84 sp|Q5HP53|XERD_STAEQ -            295   1.5e-22   79.5   0.2   1   2   3.3e-25   9.9e-22   76.9   0.0     1    84     5    88     5    88 0.99 Phage integrase, N-terminal SAM-like domain
Phage_int_SAM_4      PF13495.1     85 sp|Q5HP53|XERD_STAEQ -            295   1.1e-05   25.6   0.7   1   2   1.5e-08   4.3e-05   23.7   0.1     2    83     5    89     4    91 0.90 Phage integrase, N-terminal SAM-like domain
Integrase_1          PF12835.2    187 sp|Q5HP53|XERD_STAEQ -            295      0.03   14.1   0.3   1   1   4.6e-05      0.14   11.9   0.3    36   153   136   254   122   278 0.65 Integrase
Pribosyltran         PF00156.22   125 sp|Q5HRX4|XPT_STAEQ  -            192   3.3e-12   46.2   0.1   1   1   6.5e-16   4.8e-12   45.6   0.1     5   125    30   154    26   154 0.90 Phosphoribosyl transferase domain
FGGY_N               PF00370.16   245 sp|Q5HL88|XYLB_STAEQ -            496   2.3e-71  239.9   0.0   1   1   8.7e-75   4.3e-71  239.0   0.0     1   245     5   244     5   244 0.98 FGGY family of carbohydrate kinases, N-terminal domain
FGGY_C               PF02782.11   198 sp|Q5HL88|XYLB_STAEQ -            496   4.9e-39  133.9   0.0   1   2   2.3e-42   1.1e-38  132.8   0.1     1   197   253   439   253   440 0.88 FGGY family of carbohydrate kinases, C-terminal domain
BcrAD_BadFG          PF01869.15   271 sp|Q5HL88|XYLB_STAEQ -            496     0.029   13.6   0.1   1   2   0.00015      0.73    9.0   0.0     1    73     7    85     7   113 0.66 BadF/BadG/BcrA/BcrD ATPase family
DUF2309              PF10070.4    788 sp|Q5HRV7|Y085_STAEQ -            855  9.4e-275  913.6   1.3   1   1  1.4e-278  1.1e-274  913.4   1.3     2   788    10   841     9   841 0.95 Uncharacterized protein conserved in bacteria (DUF2309)
DUF1533              PF07550.6     65 sp|Q5HRV7|Y085_STAEQ -            855      0.14   12.2   2.6   1   2   8.5e-05      0.63   10.0   1.2    14    53   119   158    94   161 0.92 Protein of unknown function (DUF1533)
Disulph_isomer       PF06491.6    136 sp|Q5HPA7|Y1006_STAEQ -            145   5.7e-57  191.3   0.1   1   1   8.7e-61   6.4e-57  191.1   0.1     1   136     7   144     7   144 0.97 Disulphide isomerase
LytR_C               PF13399.1     90 sp|Q5HPA7|Y1006_STAEQ -            145    0.0014   18.9   0.4   1   1   3.5e-07    0.0026   18.1   0.3    15    87     9    87     5    90 0.73 LytR cell envelope-related transcriptional attenuator
DUF1273              PF06908.6    177 sp|Q5HP96|Y1017_STAEQ -            188   2.1e-69  232.7   6.6   1   1   1.6e-73   2.3e-69  232.5   6.6     1   176     1   177     1   178 0.99 Protein of unknown function (DUF1273)
UPF0302              PF08864.5    106 sp|Q5HP81|Y1032_STAEQ -            187   3.8e-34  116.6   6.1   1   2   7.7e-38   3.8e-34  116.6   6.1     2   106     9   112     8   112 0.98 UPF0302 domain
IDEAL                PF08858.5     37 sp|Q5HP81|Y1032_STAEQ -            187   3.9e-11   42.2   0.4   1   1   1.8e-14     9e-11   41.0   0.4     2    37   137   172   136   172 0.97 IDEAL domain
Disulph_isomer       PF06491.6    136 sp|Q5HP38|Y1075_STAEQ -            145     5e-62  207.7   0.1   1   1   3.8e-66   5.6e-62  207.5   0.1     1   136     8   142     8   142 1.00 Disulphide isomerase
Cons_hypoth698       PF03601.9    305 sp|Q5HRT2|Y111_STAEQ -            331   9.3e-84  280.6  32.1   1   1   7.4e-88   1.1e-83  280.4  32.1     1   304    11   310    11   311 0.99 Conserved hypothetical protein 698
YdfA_immunity        PF12127.3    318 sp|Q5HNX4|Y1140_STAEQ -            329  3.9e-163  541.8  15.1   1   1  9.5e-167  4.7e-163  541.5  15.1     2   316     5   319     4   322 0.99 SigmaW regulon antibacterial
Seryl_tRNA_N         PF02403.17   108 sp|Q5HNX4|Y1140_STAEQ -            329   0.00069   19.6   3.4   1   1   2.8e-07    0.0014   18.6   3.4     8    97   192   281   189   287 0.90 Seryl-tRNA synthetase N-terminal domain
FtsH_ext             PF06480.10   110 sp|Q5HNX4|Y1140_STAEQ -            329     0.069   13.3   0.0   1   1   3.2e-05      0.16   12.1   0.0     2    56     7   108     6   249 0.73 FtsH Extracellular
YbaB_DNA_bd          PF02575.11    93 sp|Q5HRS8|Y115_STAEQ -            105   9.1e-36  121.6  10.6   1   1   5.9e-39   1.1e-35  121.3  10.6     1    93    11   103    11   103 0.99 YbaB/EbfC DNA-binding family
YajC                 PF02699.10    83 sp|Q5HRS8|Y115_STAEQ -            105    0.0037   16.9   4.3   1   1   2.9e-06    0.0054   16.3   4.3    20    69    10    60     7    72 0.92 Preprotein translocase subunit
DUF4533              PF15047.1    225 sp|Q5HRS8|Y115_STAEQ -            105     0.017   14.5   2.0   1   1   1.1e-05     0.021   14.2   2.0    52   124     6    86     4    93 0.68 Protein of unknown function (DUF4533)
Semialdhyde_dhC      PF02774.13   184 sp|Q5HRS8|Y115_STAEQ -            105      0.03   14.1   0.6   1   1   1.8e-05     0.033   14.0   0.6    61   127     9    69     2    98 0.61 Semialdehyde dehydrogenase, dimerisation domain
DUF3782              PF12644.2     64 sp|Q5HRS8|Y115_STAEQ -            105     0.032   14.0   0.1   1   1   2.7e-05     0.051   13.3   0.1     1    37    12    75    12    93 0.90 Protein of unknown function (DUF3782)
DUF4510              PF14971.1    163 sp|Q5HRS8|Y115_STAEQ -            105     0.042   14.0   3.0   1   1   2.6e-05     0.048   13.8   3.0    22    80     2    57     1   103 0.84 Domain of unknown function (DUF4510)
LamB_YcsF            PF03746.11   242 sp|Q5HNU6|Y1168_STAEQ -            252  3.2e-107  357.1   0.7   1   1  2.4e-111  3.6e-107  356.9   0.7     1   241     4   244     4   245 0.99 LamB/YcsF family
DUF1292              PF06949.6     76 sp|Q5HNT5|Y1179_STAEQ -            102   1.4e-15   57.3   7.7   2   2   9.7e-20   1.4e-15   57.3   7.7     1    76    24   102    24   102 0.94 Protein of unknown function (DUF1292)
DUF965               PF06135.7     79 sp|Q5HNT3|Y1181_STAEQ -             86   1.8e-37  127.2   0.3   1   1   5.4e-41     2e-37  127.0   0.3     1    79     4    82     4    82 0.99 Bacterial protein of unknown function (DUF965)
DDE_Tnp_ISAZ013      PF07592.6    311 sp|Q5HNT3|Y1181_STAEQ -             86     0.019   13.6   0.0   1   1   5.3e-06      0.02   13.6   0.0    27    80    24    77    11    86 0.79 Rhodopirellula transposase DDE domain
Ribonuc_L-PSP        PF01042.16   121 sp|Q5HNT3|Y1181_STAEQ -             86     0.056   13.2   0.0   1   1   1.7e-05     0.064   13.0   0.0    32    70     6    43     2    70 0.76 Endoribonuclease L-PSP
CHASE3               PF05227.8    138 sp|Q5HNT3|Y1181_STAEQ -             86     0.061   13.0   0.0   1   1   2.1e-05     0.077   12.6   0.0    30    52    43    65    18    71 0.84 CHASE3 domain
ACT                  PF01842.20    66 sp|Q5HNQ8|Y1207_STAEQ -            151   3.1e-05   23.3   0.2   1   1   1.3e-08   6.3e-05   22.3   0.2     2    44    74   114    73   138 0.80 ACT domain
ACT_4                PF13291.1     80 sp|Q5HNQ8|Y1207_STAEQ -            151   6.6e-05   23.1   3.4   1   1   2.2e-08   0.00011   22.5   3.4     8    78    74   144    69   145 0.90 ACT domain
HTH_7                PF02796.10    45 sp|Q5HNQ8|Y1207_STAEQ -            151     0.074   12.9   0.3   1   1   4.3e-05      0.21   11.4   0.1    26    41    41    56    37    59 0.84 Helix-turn-helix domain of resolvase
GIY-YIG              PF01541.19    80 sp|Q5HRR7|Y126_STAEQ -             82   6.2e-12   45.7   4.4   1   1   4.8e-16     7e-12   45.5   4.4     1    78     3    75     3    77 0.93 GIY-YIG catalytic domain
Lactamase_B_3        PF13483.1    163 sp|Q5HNJ8|Y1270_STAEQ -            229   3.1e-23   82.2   0.2   1   1   8.1e-27     4e-23   81.9   0.2     1   163     2   195     2   195 0.80 Beta-lactamase superfamily domain
Lactamase_B          PF00753.22   194 sp|Q5HNJ8|Y1270_STAEQ -            229     8e-18   64.7   3.6   1   1   2.1e-21   1.1e-17   64.3   3.6     6   156     8   155     4   189 0.90 Metallo-beta-lactamase superfamily
Lactamase_B_2        PF12706.2    194 sp|Q5HNJ8|Y1270_STAEQ -            229   3.4e-16   59.3   1.4   1   1   8.8e-20   4.3e-16   59.0   1.4     4   193    21   195    18   196 0.67 Beta-lactamase superfamily domain
Peptidase_M24        PF00557.19   207 sp|Q5HNJ7|Y1271_STAEQ -            351   1.3e-62  211.0   0.8   1   1   2.4e-66   1.8e-62  210.6   0.8     3   207   139   340   138   340 0.96 Metallopeptidase family M24
Creatinase_N         PF01321.13   132 sp|Q5HNJ7|Y1271_STAEQ -            351   8.3e-20   71.6   0.0   1   1   2.5e-23   1.8e-19   70.5   0.0     2   132     4   130     3   130 0.96 Creatinase/Prolidase N-terminal domain
Usp                  PF00582.21   140 sp|Q5HNJ5|Y1273_STAEQ -            166   7.5e-31  107.1   0.1   1   1   5.9e-35   8.8e-31  106.9   0.1     2   140     4   143     3   143 0.98 Universal stress protein family
DUF948               PF06103.6     90 sp|Q5HNH0|Y1299_STAEQ -            163   2.8e-32  110.4   1.1   1   2   5.1e-35   2.8e-32  110.4   1.1     1    89     7    95     7    96 0.99 Bacterial protein of unknown function (DUF948)
MCPsignal            PF00015.16   213 sp|Q5HNH0|Y1299_STAEQ -            163    0.0001   21.9   1.3   1   1   2.5e-07   0.00014   21.5   1.3   106   187    45   127    22   151 0.70 Methyl-accepting chemotaxis protein (MCP) signalling domain
Laminin_II           PF06009.7    138 sp|Q5HNH0|Y1299_STAEQ -            163    0.0001   22.0   2.8   1   2   2.5e-07   0.00014   21.6   1.3     2    91    31   118    30   131 0.88 Laminin Domain II
Reo_sigmaC           PF04582.7    326 sp|Q5HNH0|Y1299_STAEQ -            163   0.00075   18.7   0.6   1   1   1.7e-06   0.00093   18.4   0.6    29   151    33   117    14   135 0.51 Reovirus sigma C capsid protein
Baculo_PEP_C         PF04513.7    140 sp|Q5HNH0|Y1299_STAEQ -            163     0.001   18.8   2.4   1   1   2.8e-06    0.0015   18.3   2.4    36   126    37   111     7   130 0.55 Baculovirus polyhedron envelope protein, PEP, C terminus
IncA                 PF04156.9    191 sp|Q5HNH0|Y1299_STAEQ -            163    0.0027   17.3   0.0   1   1   6.1e-06    0.0033   17.0   0.0    39   116     6    81     3   131 0.83 IncA protein
Tweety               PF04906.8    406 sp|Q5HNH0|Y1299_STAEQ -            163    0.0037   15.7   1.6   1   1   8.4e-06    0.0046   15.4   1.6    66   166    12   112     7   134 0.77 Tweety
COG2                 PF06148.6    133 sp|Q5HNH0|Y1299_STAEQ -            163    0.0093   15.8   0.8   1   2   0.00086      0.47   10.3   0.1    59   109    29    79    27    84 0.89 COG (conserved oligomeric Golgi) complex component, COG2
DUF2365              PF10157.4    149 sp|Q5HNH0|Y1299_STAEQ -            163     0.011   15.6   0.6   1   1   2.6e-05     0.014   15.2   0.6    52   110    47   103    27   130 0.77 Uncharacterized conserved protein (DUF2365)
BLOC1_2              PF10046.4     99 sp|Q5HNH0|Y1299_STAEQ -            163     0.019   15.0   0.3   1   1   0.00024      0.13   12.4   0.1     4    76    36   105    32   120 0.59 Biogenesis of lysosome-related organelles complex-1 subunit 2
ISG65-75             PF11727.3    286 sp|Q5HNH0|Y1299_STAEQ -            163     0.022   13.8   1.0   1   1   5.6e-05     0.031   13.3   1.0    50   126    49   132    15   161 0.66 Invariant surface glycoprotein
Laminin_I            PF06008.9    264 sp|Q5HNH0|Y1299_STAEQ -            163     0.024   13.9   0.3   1   1   5.8e-05     0.032   13.5   0.3    44   121    38   116    27   131 0.81 Laminin Domain I
DUF2067              PF09840.4    190 sp|Q5HNH0|Y1299_STAEQ -            163     0.034   13.6   0.7   2   2   0.00093      0.51    9.8   0.1    39    87   107   158    83   163 0.75 Uncharacterized protein conserved in archaea (DUF2067)
Phage_GPO            PF05929.6    276 sp|Q5HNH0|Y1299_STAEQ -            163     0.035   13.3   0.2   1   1   7.1e-05     0.039   13.2   0.2   171   249    54   130    27   151 0.77 Phage capsid scaffolding protein (GPO) serine peptidase
COG6                 PF06419.6    618 sp|Q5HNH0|Y1299_STAEQ -            163     0.035   12.2   0.4   2   2   0.00036       0.2    9.7   0.2    37    92    73   128    63   134 0.86 Conserved oligomeric complex COG6
Focal_AT             PF03623.8    139 sp|Q5HNH0|Y1299_STAEQ -            163     0.037   13.4   0.4   1   1   8.9e-05     0.049   13.1   0.4    13    69    53   111    29   134 0.82 Focal adhesion targeting region
DASH_Dad2            PF08654.5    103 sp|Q5HNH0|Y1299_STAEQ -            163     0.048   13.6   1.4   1   1   0.00026      0.14   12.1   1.3    14    66    57   109    48   160 0.88 DASH complex subunit Dad2
DUF1664              PF07889.7    126 sp|Q5HNH0|Y1299_STAEQ -            163      0.05   13.4   1.8   1   1   0.00052      0.29   10.9   1.4    48   112    37   104    32   134 0.49 Protein of unknown function (DUF1664)
DUF4446              PF14584.1    152 sp|Q5HNH0|Y1299_STAEQ -            163     0.055   13.3   0.5   1   1   0.00029      0.16   11.8   0.1     6    76    10    79     2    92 0.58 Protein of unknown function (DUF4446)
Syntaxin             PF00804.20   103 sp|Q5HNH0|Y1299_STAEQ -            163     0.079   13.1   0.6   1   1   0.00027      0.15   12.2   0.6    12    83    55   142    29   150 0.61 Syntaxin
Orbi_NS3             PF01616.11   195 sp|Q5HNH0|Y1299_STAEQ -            163       0.1   11.5   0.0   1   1   0.00032      0.18   10.7   0.0    99   162    13    76     3    80 0.85 Orbivirus NS3
HsbA                 PF12296.3    124 sp|Q5HNH0|Y1299_STAEQ -            163      0.13   12.1   3.5   2   2     0.001      0.56   10.0   1.5     3    48    76   119    74   123 0.89 Hydrophobic surface binding protein A
DUF1444              PF07285.6    265 sp|Q5HNG6|Y1303_STAEQ -            284  1.6e-123  411.2   5.0   1   1  1.3e-127  1.9e-123  411.0   5.0     1   265     1   265     1   265 0.99 Protein of unknown function (DUF1444)
DUF964               PF06133.6    108 sp|Q5HN91|Y1381_STAEQ -            114   7.9e-35  119.1  20.5   1   1   4.1e-38   8.8e-35  118.9  20.5     1   107     4   110     4   111 0.99 Protein of unknown function (DUF964)
DUF3818              PF12825.2    341 sp|Q5HN91|Y1381_STAEQ -            114     0.023   13.4   5.4   1   1   1.2e-05     0.026   13.2   5.4   163   256    16   113     7   114 0.74 Domain of unknown function in PX-proteins (DUF3818)
PFEMP                PF03011.10   150 sp|Q5HN91|Y1381_STAEQ -            114     0.037   14.3   8.4   1   1   2.3e-05     0.048   14.0   8.4    51   130    19   106    16   112 0.78 PFEMP DBL domain
Rapamycin_bind       PF08771.6    100 sp|Q5HN91|Y1381_STAEQ -            114     0.083   12.9   5.3   1   1   0.00013      0.27   11.3   5.3    61    99    64   102     8   103 0.67 Rapamycin binding domain
AbiH                 PF14253.1    270 sp|Q5HN91|Y1381_STAEQ -            114      0.31   10.6   7.4   1   1   0.00019       0.4   10.2   7.4   144   239     8   105     4   106 0.64 Bacteriophage abortive infection AbiH
DUF445               PF04286.7    367 sp|Q5HN90|Y1382_STAEQ -            376   5.6e-81  272.8   9.2   1   1   4.7e-84   6.3e-81  272.7   9.2     1   366    12   375    12   376 0.97 Protein of unknown function (DUF445)
EcsC                 PF12787.2    249 sp|Q5HN90|Y1382_STAEQ -            376    0.0029   17.0   0.2   2   2   2.1e-06    0.0029   17.0   0.2     3   120   255   371   253   374 0.83 EcsC protein family
Colicin_Pyocin       PF01320.13    85 sp|Q5HN90|Y1382_STAEQ -            376     0.071   12.9   1.1   1   1   0.00021      0.29   11.0   0.3    12    56   182   236   175   260 0.74 Colicin immunity protein / pyocin immunity protein
HTH_26               PF13443.1     63 sp|Q5HN90|Y1382_STAEQ -            376     0.079   13.1   0.9   1   2   0.00074      0.99    9.6   0.1    22    60    83   123    60   125 0.79 Cro/C1-type HTH DNA-binding domain
HTH_19               PF12844.2     64 sp|Q5HN90|Y1382_STAEQ -            376      0.41   10.7   4.2   1   3   0.00049      0.66   10.0   0.1    26    60    85   122    54   125 0.73 Helix-turn-helix domain
BACK                 PF07707.10   103 sp|Q5HN90|Y1382_STAEQ -            376      0.57   10.0   5.6   1   1   0.00061      0.82    9.5   2.7    13    81   234   302   228   334 0.68 BTB And C-terminal Kelch
RNase_HII            PF01351.13   198 sp|Q5HN90|Y1382_STAEQ -            376       1.1    8.9   5.3   1   2   0.00017      0.23   11.0   0.7    41   101    49   109    48   133 0.83 Ribonuclease HII
DUF402               PF04167.8     72 sp|Q5HN67|Y1405_STAEQ -            180   1.1e-22   79.5   2.2   1   2   1.5e-26   1.1e-22   79.5   2.2     5    72    62   127    60   127 0.97 Protein of unknown function (DUF402)
DUF624               PF04854.9     77 sp|Q5HN67|Y1405_STAEQ -            180      0.16   11.8   0.2   1   1   4.7e-05      0.35   10.7   0.2    31    58   150   176   148   178 0.92 Protein of unknown function, DUF624
DJ-1_PfpI            PF01965.19   147 sp|Q5HN59|Y1413_STAEQ -            172   5.8e-40  136.1   0.1   1   1   2.3e-43   6.9e-40  135.8   0.1     2   147    32   171    31   171 0.97 DJ-1/PfpI family
DUF4066              PF13278.1    166 sp|Q5HN59|Y1413_STAEQ -            172   8.7e-14   51.1   0.0   1   1   3.6e-17   1.1e-13   50.8   0.0     2   151     9   153     8   154 0.93 Putative amidotransferase
GATase               PF00117.23   192 sp|Q5HN59|Y1413_STAEQ -            172   0.00028   20.4   0.0   1   1   1.1e-07   0.00033   20.1   0.0    15    86    23   112    12   152 0.74 Glutamine amidotransferase class-I
GATase_3             PF07685.9    158 sp|Q5HN59|Y1413_STAEQ -            172     0.038   13.5   0.0   1   1   1.9e-05     0.057   13.0   0.0     2    59    59   115    58   166 0.73 CobB/CobQ-like glutamine amidotransferase domain
B12-binding          PF02310.14   121 sp|Q5HN59|Y1413_STAEQ -            172     0.075   12.9   0.1   1   1   5.4e-05      0.16   11.8   0.0     5    41     6    49     2    77 0.74 B12 binding domain
DUF1128              PF06569.6     71 sp|Q5HN54|Y1418_STAEQ -             71   4.7e-30  103.1   0.4   1   1   3.5e-34   5.1e-30  103.0   0.4     1    71     1    67     1    67 0.96 Protein of unknown function (DUF1128)
DUF939               PF06081.6    141 sp|Q5HN45|Y1427_STAEQ -            328   1.1e-36  125.7  14.3   1   1   6.3e-40   1.9e-36  125.0  14.3     2   141     9   149     8   149 0.98 Bacterial protein of unknown function (DUF939)
FUSC                 PF04632.7    650 sp|Q5HN45|Y1427_STAEQ -            328   1.3e-09   37.1   4.7   1   1   1.7e-12   4.9e-09   35.1   4.8     6   186    15   193    12   214 0.78 Fusaric acid resistance protein family
FUSC_2               PF13515.1    128 sp|Q5HN45|Y1427_STAEQ -            328   3.4e-08   33.4  10.9   1   1   3.4e-11     1e-07   31.9  10.9    13   125    34   142    18   145 0.72 Fusaric acid resistance protein-like
ALMT                 PF11744.3    406 sp|Q5HN45|Y1427_STAEQ -            328   0.00028   19.6   7.8   1   1   3.7e-07    0.0011   17.7   7.8    23   241    23   212    12   315 0.73 Aluminium activated malate transporter
tRNA_U5-meth_tr      PF05958.6    352 sp|Q5HN37|Y1435_STAEQ -            456   6.8e-21   74.3   6.0   1   1   2.1e-22   1.5e-19   69.8   6.0     2   351    90   452    89   453 0.74 tRNA (Uracil-5-)-methyltransferase
Methyltransf_31      PF13847.1    152 sp|Q5HN37|Y1435_STAEQ -            456   1.3e-10   41.0   0.0   1   1   5.1e-13   3.8e-10   39.5   0.0     3    66   307   368   305   443 0.91 Methyltransferase domain
Methyltransf_26      PF13659.1    117 sp|Q5HN37|Y1435_STAEQ -            456   1.5e-08   34.6   0.0   1   1   3.4e-11   2.5e-08   33.9   0.0     4    79   311   386   308   430 0.90 Methyltransferase domain
Met_10               PF02475.11   200 sp|Q5HN37|Y1435_STAEQ -            456   6.1e-06   25.9   0.1   1   1   2.3e-08   1.7e-05   24.5   0.1    49   165   253   368   212   408 0.69 Met-10+ like-protein
Methyltransf_18      PF12847.2    112 sp|Q5HN37|Y1435_STAEQ -            456   1.6e-05   25.4   0.0   1   1   4.4e-08   3.3e-05   24.4   0.0     5    77   310   384   306   412 0.80 Methyltransferase domain
MTS                  PF05175.9    170 sp|Q5HN37|Y1435_STAEQ -            456     4e-05   23.0   0.0   1   1   1.2e-07   8.7e-05   21.9   0.0    32    85   306   359   290   397 0.79 Methyltransferase small domain
PrmA                 PF06325.8    295 sp|Q5HN37|Y1435_STAEQ -            456   0.00014   21.1   0.0   1   1   4.2e-07   0.00031   19.9   0.0   149   214   294   360   289   376 0.81 Ribosomal protein L11 methyltransferase (PrmA)
Methyltransf_15      PF09445.5    164 sp|Q5HN37|Y1435_STAEQ -            456   0.00017   21.1   0.2   1   1   1.3e-06   0.00093   18.7   0.0     2    83   309   390   308   398 0.94 RNA cap guanine-N2 methyltransferase
Cons_hypoth95        PF03602.10   183 sp|Q5HN37|Y1435_STAEQ -            456   0.00033   20.1   0.0   1   1   1.1e-06   0.00081   18.8   0.0    41   151   306   409   292   430 0.75 Conserved hypothetical protein 95
N6_N4_Mtase          PF01555.13   231 sp|Q5HN37|Y1435_STAEQ -            456    0.0014   18.1   0.2   1   1   7.2e-06    0.0054   16.2   0.0   192   230   308   346   206   347 0.80 DNA methylase
Methyltransf_11      PF08241.7     95 sp|Q5HN37|Y1435_STAEQ -            456    0.0016   18.9   0.0   1   1   5.7e-06    0.0042   17.5   0.0     4    54   315   367   312   373 0.92 Methyltransferase domain
UPF0020              PF01170.13   180 sp|Q5HN37|Y1435_STAEQ -            456    0.0021   17.6   0.0   1   1   5.9e-06    0.0044   16.6   0.0    19   115   298   386   285   387 0.81 Putative RNA methylase family UPF0020
Methyltransf_4       PF02390.12   197 sp|Q5HN37|Y1435_STAEQ -            456    0.0032   16.5   0.0   1   1   7.5e-06    0.0056   15.7   0.0    11    87   291   373   280   385 0.81 Putative methyltransferase
Methyltransf_12      PF08242.7     99 sp|Q5HN37|Y1435_STAEQ -            456    0.0079   16.6   0.1   2   2   0.00042      0.31   11.5   0.0     1    57   312   366   312   375 0.85 Methyltransferase domain
PCMT                 PF01135.14   210 sp|Q5HN37|Y1435_STAEQ -            456     0.015   14.8   0.2   1   1   8.5e-05     0.063   12.8   0.1    39   131   273   362   243   368 0.85 Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT)
TRAM                 PF01938.15    61 sp|Q5HN37|Y1435_STAEQ -            456     0.016   15.0   0.4   1   1   4.3e-05     0.032   14.0   0.4    12    61    14    60     7    60 0.91 TRAM domain
DltD_C               PF04914.7    130 sp|Q5HN37|Y1435_STAEQ -            456     0.037   13.8   0.8   1   1   0.00014      0.11   12.4   0.3    30    96   217   283   198   290 0.92 DltD C-terminal region
PDGF                 PF00341.12    82 sp|Q5HN37|Y1435_STAEQ -            456      0.08   13.0   0.0   1   1   0.00035      0.26   11.4   0.0    15    38    63    86    55   116 0.79 PDGF/VEGF domain
RasGEF_N             PF00618.15   104 sp|Q5HN37|Y1435_STAEQ -            456     0.099   12.7   1.2   1   1   0.00037      0.27   11.3   0.3     6    61   192   251   187   302 0.73 RasGEF N-terminal motif
Methyltransf_25      PF13649.1    101 sp|Q5HN37|Y1435_STAEQ -            456      0.14   12.5   0.0   1   1   0.00066      0.49   10.7   0.0     1    61   311   367   311   409 0.84 Methyltransferase domain
DUF2179              PF10035.4     55 sp|Q5HN24|Y1448_STAEQ -            208   6.6e-13   48.0   0.0   1   1   2.4e-16   1.8e-12   46.6   0.0     1    55   117   169   117   169 0.99 Uncharacterized protein conserved in bacteria (DUF2179)
YrvL                 PF14184.1    134 sp|Q5HN24|Y1448_STAEQ -            208      0.62    9.8   8.8   1   1   0.00012      0.92    9.3   8.8     9    62    11    65     8    87 0.69 Regulatory protein YrvL
Lactonase            PF10282.4    345 sp|Q5HN15|Y1457_STAEQ -            342  2.1e-107  359.1   0.2   1   1  3.2e-111  2.4e-107  359.0   0.2     2   344     4   341     3   342 0.97 Lactonase, 7-bladed beta-propeller
bPH_5                PF10882.3    100 sp|Q5HM57|Y1772_STAEQ -             86   0.00024   20.8   1.8   1   1   7.1e-08     0.001   18.7   1.8     6    74     8    81     3    86 0.88 Bacterial PH domain
2-Hacid_dh_C         PF02826.14   178 sp|Q5HLU4|Y1888_STAEQ -            317   3.1e-59  199.1   0.0   1   1   2.4e-62   5.2e-59  198.3   0.0     1   178   108   285   108   285 0.98 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain
2-Hacid_dh           PF00389.25   133 sp|Q5HLU4|Y1888_STAEQ -            317   2.5e-32  111.1   0.1   1   1   1.3e-35   2.8e-32  110.9   0.1     2   133     5   317     4   317 0.98 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain
IlvN                 PF07991.7    165 sp|Q5HLU4|Y1888_STAEQ -            317    0.0018   17.6   0.1   2   2   4.6e-06    0.0097   15.2   0.0     3    67   144   206   142   241 0.86 Acetohydroxy acid isomeroreductase, catalytic domain
F420_oxidored        PF03807.12    96 sp|Q5HLU4|Y1888_STAEQ -            317     0.003   17.9   0.0   1   1   4.4e-06    0.0092   16.3   0.0     1    65   147   203   147   212 0.79 NADP oxidoreductase coenzyme F420-dependent
NAD_binding_2        PF03446.10   163 sp|Q5HLU4|Y1888_STAEQ -            317    0.0038   17.0   0.1   2   2   6.8e-06     0.014   15.2   0.0     2   113   146   254   145   262 0.82 NAD binding domain of 6-phosphogluconate dehydrogenase
AdoHcyase_NAD        PF00670.16   162 sp|Q5HLU4|Y1888_STAEQ -            317    0.0084   15.9   1.8   2   2   0.00012      0.25   11.1   0.2    21   111   143   236   139   267 0.77 S-adenosyl-L-homocysteine hydrolase, NAD binding domain
Epimerase            PF01370.16   236 sp|Q5HRJ9|Y194_STAEQ -            318   8.7e-22   77.7   0.0   1   1   4.3e-25   1.1e-21   77.4   0.0     1   228     4   234     4   242 0.87 NAD dependent epimerase/dehydratase family
RmlD_sub_bind        PF04321.12   287 sp|Q5HRJ9|Y194_STAEQ -            318   3.8e-09   35.8   0.0   1   1   1.7e-12   4.2e-09   35.7   0.0     2   138     3   155     1   243 0.88 RmlD substrate binding domain
Polysacc_synt_2      PF02719.10   294 sp|Q5HRJ9|Y194_STAEQ -            318   5.8e-08   31.9   0.0   1   1   8.9e-11   2.2e-07   30.0   0.0     1   153     4   157     4   173 0.76 Polysaccharide biosynthesis protein
3Beta_HSD            PF01073.14   280 sp|Q5HRJ9|Y194_STAEQ -            318   6.1e-05   21.8   0.0   1   2     8e-08    0.0002   20.1   0.0     1   112     5   114     5   129 0.88 3-beta hydroxysteroid dehydrogenase/isomerase family
NAD_binding_4        PF07993.7    249 sp|Q5HRJ9|Y194_STAEQ -            318    0.0018   17.2   0.1   2   2   1.6e-06     0.004   16.1   0.0    87   249    68   222    55   222 0.80 Male sterility protein
adh_short            PF00106.20   167 sp|Q5HRJ9|Y194_STAEQ -            318     0.005   16.7   0.0   1   1   4.2e-06      0.01   15.7   0.0     2    90     3    78     2   120 0.68 short chain dehydrogenase
adh_short            PF00106.20   167 sp|Q5HLD8|Y2049_STAEQ -            230   2.3e-35  121.9   1.1   1   1   4.7e-38   2.9e-35  121.6   1.1     1   166     7   170     7   171 0.96 short chain dehydrogenase
adh_short_C2         PF13561.1    241 sp|Q5HLD8|Y2049_STAEQ -            230   1.9e-26   93.3   1.4   1   1   4.2e-29   2.6e-26   92.8   1.4     5   191    15   195    13   226 0.89 Enoyl-(Acyl carrier protein) reductase
KR                   PF08659.5    181 sp|Q5HLD8|Y2049_STAEQ -            230   6.5e-17   61.7   1.0   1   1   1.5e-19   9.1e-17   61.3   1.0     3   176     9   183     8   187 0.88 KR domain
Epimerase            PF01370.16   236 sp|Q5HLD8|Y2049_STAEQ -            230   4.8e-14   52.3   1.0   1   1   1.6e-16   9.8e-14   51.3   0.4     2   162    10   177     9   198 0.81 NAD dependent epimerase/dehydratase family
NAD_binding_10       PF13460.1    183 sp|Q5HLD8|Y2049_STAEQ -            230   2.7e-10   40.5   0.8   1   1   7.5e-13   4.6e-10   39.7   0.8     2   166    10   199     9   216 0.69 NADH(P)-binding
Polysacc_synt_2      PF02719.10   294 sp|Q5HLD8|Y2049_STAEQ -            230   1.9e-08   33.5   2.5   1   1   4.2e-11   2.6e-08   33.1   2.5     2   163    10   177     9   185 0.71 Polysaccharide biosynthesis protein
Shikimate_DH         PF01488.15   135 sp|Q5HLD8|Y2049_STAEQ -            230   6.7e-06   26.2   1.6   1   1   2.3e-08   1.4e-05   25.1   1.0    10   117     4   115     1   130 0.74 Shikimate / quinate 5-dehydrogenase
3Beta_HSD            PF01073.14   280 sp|Q5HLD8|Y2049_STAEQ -            230   9.1e-06   24.5   0.7   1   1     2e-08   1.3e-05   24.1   0.7     1   104    10   123    10   166 0.77 3-beta hydroxysteroid dehydrogenase/isomerase family
DFP                  PF04127.10   185 sp|Q5HLD8|Y2049_STAEQ -            230   2.7e-05   23.8   2.4   1   2   3.1e-07   0.00019   21.0   1.0    20    91     8    89     6   107 0.74 DNA / pantothenate metabolism flavoprotein
F420_oxidored        PF03807.12    96 sp|Q5HLD8|Y2049_STAEQ -            230   5.2e-05   23.5   1.3   1   1   1.7e-07   0.00011   22.5   0.3     3    59     9    63     7    96 0.78 NADP oxidoreductase coenzyme F420-dependent
TrkA_N               PF02254.13   116 sp|Q5HLD8|Y2049_STAEQ -            230    0.0003   20.7   0.3   1   1   1.1e-06   0.00067   19.6   0.3     8    64    17    79     9    98 0.75 TrkA-N domain
DUF1776              PF08643.5    299 sp|Q5HLD8|Y2049_STAEQ -            230    0.0017   17.5   0.1   1   1   3.5e-06    0.0022   17.2   0.1   105   202    92   186     7   213 0.91 Fungal family of unknown function (DUF1776)
Eno-Rase_NADH_b      PF12242.3     78 sp|Q5HLD8|Y2049_STAEQ -            230    0.0034   17.1   0.2   1   1   1.7e-05      0.01   15.5   0.2    40    75     7    41     2    44 0.82 NAD(P)H binding domain of trans-2-enoyl-CoA reductase
Semialdhyde_dh       PF01118.19   121 sp|Q5HLD8|Y2049_STAEQ -            230    0.0038   17.5   1.6   1   2    0.0005      0.31   11.3   0.6     3    95     9   109     7   117 0.69 Semialdehyde dehydrogenase, NAD binding domain
Glyco_transf_9       PF01075.12   247 sp|Q5HLD8|Y2049_STAEQ -            230    0.0044   16.2   0.0   1   1   1.1e-05    0.0069   15.6   0.0   128   179    21    72    20    86 0.86 Glycosyltransferase family 9 (heptosyltransferase)
NAD_Gly3P_dh_N       PF01210.18   157 sp|Q5HLD8|Y2049_STAEQ -            230    0.0052   16.5   0.9   1   1   1.4e-05    0.0086   15.8   0.6    10    85    18    93     7   143 0.75 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus
THF_DHG_CYH_C        PF02882.14   161 sp|Q5HLD8|Y2049_STAEQ -            230    0.0057   15.7   8.5   1   3   3.5e-05     0.021   13.8   1.0    33    79     3    49     1    76 0.85 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain
Asp23                PF03780.8    108 sp|Q5HLD8|Y2049_STAEQ -            230    0.0061   16.8   0.1   1   1   9.8e-06    0.0061   16.8   0.1    16   102   141   227   136   228 0.91 Asp23 family
ApbA                 PF02558.11   151 sp|Q5HLD8|Y2049_STAEQ -            230    0.0076   15.7   0.1   1   1     3e-05     0.019   14.4   0.1     8    70    17    83    10    88 0.67 Ketopantoate reductase PanE/ApbA
NmrA                 PF05368.8    233 sp|Q5HLD8|Y2049_STAEQ -            230     0.013   14.7   0.8   1   1   2.2e-05     0.013   14.7   0.8     2    65    10    74     9    95 0.90 NmrA-like family
ADH_zinc_N           PF00107.21   130 sp|Q5HLD8|Y2049_STAEQ -            230     0.036   13.5   0.1   1   1   0.00018      0.11   12.0   0.1     2    70    18    91    17    99 0.80 Zinc-binding dehydrogenase
Glyco_tran_WecB      PF03808.8    172 sp|Q5HLD8|Y2049_STAEQ -            230     0.039   13.3   0.1   1   2    0.0008      0.49    9.7   0.0    37    72    19    54     2   124 0.82 Glycosyl transferase WecB/TagA/CpsF family
3HCDH_N              PF02737.13   180 sp|Q5HLD8|Y2049_STAEQ -            230     0.053   13.1   1.3   1   1   0.00014     0.084   12.5   0.5     6    66    13    73     7    89 0.77 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain
CoA_binding_2        PF13380.1    116 sp|Q5HLD8|Y2049_STAEQ -            230     0.066   13.3   0.6   1   2   0.00095      0.59   10.3   0.1     4    66    10    66     7   104 0.76 CoA binding domain
Nitroreductase       PF00881.19   165 sp|Q5HLA1|Y2086_STAEQ -            220     2e-32  112.2   0.0   1   1   1.7e-36   2.5e-32  111.9   0.0     2   165    13   198    12   198 0.94 Nitroreductase family
DUF423               PF04241.10    89 sp|Q5HRG3|Y230_STAEQ -            122   1.1e-30  105.3   4.0   1   1   1.2e-34   1.7e-30  104.7   4.0     2    89    18   104    17   104 0.98 Protein of unknown function (DUF423)
YceI                 PF04264.8    164 sp|Q5HKN0|Y2314_STAEQ -            171     6e-29  101.1   5.7   1   1   4.6e-33   6.8e-29  100.9   5.7     2   163     4   167     3   168 0.93 YceI-like domain
DUF3650              PF12368.3     28 sp|Q5HKM8|Y2316_STAEQ -            320   2.6e-14   52.3   3.4   1   1     2e-17   7.3e-14   50.9   3.4     1    28   284   311   284   311 0.97 Protein of unknown function (DUF3650)
Rhodanese            PF00581.15   113 sp|Q5HKM8|Y2316_STAEQ -            320   2.2e-13   50.5   0.0   1   1   1.1e-16   4.1e-13   49.6   0.0     1   110   114   208   114   211 0.84 Rhodanese-like domain
BLUF                 PF04940.7     93 sp|Q5HKM8|Y2316_STAEQ -            320       0.1   12.3   0.0   1   1   6.8e-05      0.25   11.0   0.0    27    90    25    87    12    89 0.84 Sensors of blue-light using FAD
Rep_fac-A_C          PF08646.5    146 sp|Q5HKM8|Y2316_STAEQ -            320      0.11   12.1   2.7   2   2   0.00017      0.63    9.7   1.3    18    75   255   314   249   318 0.75 Replication factor-A C terminal domain
Chlor_dismutase      PF06778.7    193 sp|Q5HRF8|Y235_STAEQ -            249   1.3e-76  256.6   0.3   1   1     2e-80   1.5e-76  256.4   0.3     1   193    31   235    31   235 0.98 Chlorite dismutase
MGAT2                PF05060.9    356 sp|Q5HRF8|Y235_STAEQ -            249     0.043   12.7   0.0   1   1   7.3e-06     0.054   12.3   0.0   182   280   121   217    83   234 0.74 N-acetylglucosaminyltransferase II (MGAT2)
DUF1450              PF07293.6     78 sp|Q5HRF2|Y241_STAEQ -            113   2.4e-06   27.4   0.0   1   1   4.9e-10   3.6e-06   26.8   0.0    21    74    21    74     5    76 0.85 Protein of unknown function (DUF1450)
DUF3987              PF13148.1    378 sp|Q5HRF2|Y241_STAEQ -            113       0.2   10.1   7.7   1   1   3.6e-05      0.26    9.7   7.7    47   120    41   112    38   113 0.82 Protein of unknown function (DUF3987)
DUF576               PF04507.7    257 sp|Q5HKC6|Y2422_STAEQ -            261    6e-132  438.2  15.2   1   1  9.1e-136  6.7e-132  438.0  15.2     1   257     1   257     1   257 1.00 Protein of unknown function, DUF576
HR1                  PF02185.11    70 sp|Q5HKC6|Y2422_STAEQ -            261      0.11   12.2   1.6   1   2   5.7e-05      0.42   10.3   0.1     7    32    27    52    26    65 0.84 Hr1 repeat
DUF576               PF04507.7    257 sp|Q5HKC5|Y2423_STAEQ -            259  4.3e-132  438.7  19.3   1   1  9.8e-136  4.8e-132  438.5  19.3     1   256     1   256     1   257 1.00 Protein of unknown function, DUF576
Integrase_Zn         PF02022.14    40 sp|Q5HKC5|Y2423_STAEQ -            259      0.11   11.9   0.0   1   1   4.1e-05       0.2   11.1   0.0     6    26   192   212   187   216 0.85 Integrase Zinc binding domain
DUF3519              PF12033.3    105 sp|Q5HKC5|Y2423_STAEQ -            259      0.91    9.7   7.8   1   2   0.00011      0.55   10.4   0.2    29    71    37    79    21    83 0.85 Protein of unknown function (DUF3519)
DUF576               PF04507.7    257 sp|Q5HKA6|Y2443_STAEQ -            253  8.5e-123  408.2  14.0   1   1  6.4e-127  9.6e-123  408.1  14.0     1   257     1   249     1   249 0.99 Protein of unknown function, DUF576
DUF576               PF04507.7    257 sp|Q5HKA4|Y2445_STAEQ -            261  3.2e-130  432.5  18.6   1   1  2.4e-134  3.6e-130  432.4  18.6     1   257     1   257     1   257 1.00 Protein of unknown function, DUF576
DUF576               PF04507.7    257 sp|Q5HKA2|Y2447_STAEQ -            253  7.2e-119  395.4  21.7   1   1  1.1e-122  8.1e-119  395.2  21.7     1   257     1   249     1   249 0.99 Protein of unknown function, DUF576
DUF3519              PF12033.3    105 sp|Q5HKA2|Y2447_STAEQ -            253     0.061   13.5  12.0   1   2     2e-05      0.15   12.2   0.7    30    97    30    98    24   100 0.84 Protein of unknown function (DUF3519)
DUF576               PF04507.7    257 sp|Q5HK99|Y2451_STAEQ -            260  8.1e-127  421.4  18.0   1   1  6.1e-131  9.1e-127  421.2  18.0     1   256     1   256     1   257 1.00 Protein of unknown function, DUF576
DUF576               PF04507.7    257 sp|Q5HK97|Y2453_STAEQ -            259  3.2e-127  422.7  14.6   1   1  2.4e-131  3.6e-127  422.6  14.6     1   257     1   257     1   257 1.00 Protein of unknown function, DUF576
DUF576               PF04507.7    257 sp|Q5HK85|Y2465_STAEQ -            259  3.4e-130  432.5  17.8   1   1  2.6e-134  3.8e-130  432.3  17.8     1   257     1   257     1   257 1.00 Protein of unknown function, DUF576
DUF111               PF01969.12   382 sp|Q5HRE0|Y253_STAEQ -            395  5.2e-146  486.3   0.0   1   1    4e-150  5.9e-146  486.1   0.0     1   381     5   377     5   378 0.99 Protein of unknown function DUF111
Transcrip_reg        PF01709.15   234 sp|Q5HR71|Y322_STAEQ -            238   2.3e-85  285.4   2.0   1   1   3.4e-89   2.5e-85  285.3   2.0     1   234     3   236     3   236 0.98 Transcriptional regulator
YscJ_FliF            PF01514.12   207 sp|Q5HR71|Y322_STAEQ -            238    0.0016   17.6   0.2   1   1   3.5e-07    0.0026   16.9   0.2    37   110   141   214   137   228 0.87 Secretory protein of YscJ/FliF family
DUF188               PF02639.9    130 sp|Q5HR57|Y336_STAEQ -            149   2.5e-39  133.6   0.0   1   1   1.9e-43   2.8e-39  133.5   0.0     2   129    18   147    17   148 0.96 Uncharacterized BCR, YaiI/YqxD family COG1671
DAGK_cat             PF00781.19   130 sp|Q5HR05|Y390_STAEQ -            307   6.5e-20   70.8   0.0   1   1   1.9e-23   9.6e-20   70.3   0.0     2   124     8   132     7   139 0.75 Diacylglycerol kinase catalytic domain
NAD_kinase           PF01513.16   285 sp|Q5HR05|Y390_STAEQ -            307    0.0018   17.1   0.0   1   2   1.7e-06    0.0085   14.8   0.0    64   118    53   114    21   181 0.78 ATP-NAD kinase
DUF2573              PF10835.3     82 sp|Q5HR05|Y390_STAEQ -            307      0.12   12.4   0.0   1   1   5.2e-05      0.26   11.3   0.0    40    73    28    61    25    66 0.93 Protein of unknown function (DUF2573)
Ribosomal_S30AE      PF02482.14    97 sp|Q5HQX7|Y419_STAEQ -            189   5.3e-28   97.3   1.9   1   1     6e-32   8.9e-28   96.5   1.9     2    96     4    98     3   100 0.91 Sigma 54 modulation protein / S30EA ribosomal protein
ATP_bind_2           PF03668.10   284 sp|Q5HQW3|Y433_STAEQ -            302  1.3e-105  352.5   0.1   1   1    1e-108  1.5e-105  352.3   0.1     2   280    12   294    11   298 0.95 P-loop ATPase protein family
AAA_18               PF13238.1    129 sp|Q5HQW3|Y433_STAEQ -            302   9.4e-05   22.7   1.5   1   1   3.4e-07    0.0005   20.3   0.5     2    99    15   169    14   176 0.67 AAA domain
AAA_17               PF13207.1    121 sp|Q5HQW3|Y433_STAEQ -            302     0.004   17.9   1.1   1   2   4.6e-05     0.069   13.9   0.1     3   100    15   103    13   201 0.68 AAA domain
SKI                  PF01202.17   158 sp|Q5HQW3|Y433_STAEQ -            302     0.013   15.4   0.7   1   1   1.9e-05     0.029   14.2   0.7    88   155    96   165    81   168 0.75 Shikimate kinase
AAA_22               PF13401.1    131 sp|Q5HQW3|Y433_STAEQ -            302     0.013   15.6   0.5   1   1   4.2e-05     0.062   13.4   0.5     3    27    10    34     6   159 0.73 AAA domain
AAA_16               PF13191.1    185 sp|Q5HQW3|Y433_STAEQ -            302      0.02   14.8   0.1   1   1   3.2e-05     0.048   13.6   0.1    22    44     9    31     5    35 0.90 AAA ATPase domain
ABC_tran             PF00005.22   137 sp|Q5HQW3|Y433_STAEQ -            302     0.054   13.7   0.6   1   2   0.00027       0.4   10.9   0.1     9    31     9    31     4    34 0.87 ABC transporter
AAA_33               PF13671.1    143 sp|Q5HQW3|Y433_STAEQ -            302       0.1   12.4   0.1   1   1   0.00043      0.63    9.9   0.1     1    28    13    39    13   173 0.63 AAA domain
ArgK                 PF03308.11   267 sp|Q5HQW3|Y433_STAEQ -            302      0.13   11.0   0.2   1   2   0.00036      0.54    8.9   0.0    24    49     6    31     1    35 0.88 ArgK protein
Epimerase            PF01370.16   236 sp|Q5HQV8|Y438_STAEQ -            299   1.2e-19   70.6   0.0   1   1   2.3e-22   3.1e-19   69.3   0.0     2   235     5   223     4   224 0.88 NAD dependent epimerase/dehydratase family
DUF1731              PF08338.6     48 sp|Q5HQV8|Y438_STAEQ -            299   4.2e-16   58.1   0.0   1   1     6e-19   8.1e-16   57.2   0.0     1    47   250   296   250   297 0.97 Domain of unknown function (DUF1731)
NAD_binding_10       PF13460.1    183 sp|Q5HQV8|Y438_STAEQ -            299   1.3e-08   35.0   0.0   1   1   1.4e-11   1.9e-08   34.5   0.0     2    79     5    78     5   124 0.78 NADH(P)-binding
NAD_binding_4        PF07993.7    249 sp|Q5HQV8|Y438_STAEQ -            299   3.2e-07   29.5   0.1   1   2   3.5e-07   0.00047   19.1   0.1     1    35     6    38     6    45 0.87 Male sterility protein
NAD_binding_4        PF07993.7    249 sp|Q5HQV8|Y438_STAEQ -            299   3.2e-07   29.5   0.1   2   2   0.00058      0.78    8.6   0.0    77   137    49   116    42   198 0.82 Male sterility protein
adh_short            PF00106.20   167 sp|Q5HQV8|Y438_STAEQ -            299   0.00014   21.8   0.0   1   2   1.2e-05     0.016   15.1   0.0     2    36     3    36     2    52 0.78 short chain dehydrogenase
KR                   PF08659.5    181 sp|Q5HQV8|Y438_STAEQ -            299   0.00019   21.1   0.0   1   2   4.4e-07   0.00059   19.5   0.0     3    67     4    67     3    83 0.83 KR domain
RmlD_sub_bind        PF04321.12   287 sp|Q5HQV8|Y438_STAEQ -            299   0.00062   18.7   0.0   1   1   7.8e-07     0.001   17.9   0.0     2    65     3    73     1   104 0.69 RmlD substrate binding domain
Polysacc_synt_2      PF02719.10   294 sp|Q5HQV8|Y438_STAEQ -            299    0.0048   15.8   0.4   1   2   3.7e-05     0.051   12.4   0.2     2    34     5    37     4   119 0.80 Polysaccharide biosynthesis protein
NmrA                 PF05368.8    233 sp|Q5HQV8|Y438_STAEQ -            299    0.0066   15.7   0.0   1   1   8.9e-06     0.012   14.8   0.0     2    36     5    39     4    46 0.90 NmrA-like family
NAD_binding_7        PF13241.1    103 sp|Q5HQV8|Y438_STAEQ -            299     0.011   16.0   0.0   1   1   1.2e-05     0.017   15.3   0.0     9    82     3    80     1    94 0.78 Putative NAD(P)-binding
3Beta_HSD            PF01073.14   280 sp|Q5HQV8|Y438_STAEQ -            299     0.023   13.4   0.0   1   1   2.7e-05     0.036   12.7   0.0     1    99     5    94     5   114 0.69 3-beta hydroxysteroid dehydrogenase/isomerase family
CsbD                 PF05532.7     53 sp|Q5HQQ4|Y494_STAEQ -             63   1.4e-14   53.4  13.0   1   1   3.8e-18   1.4e-14   53.4  13.0     3    53     2    52     1    52 0.97 CsbD-like
YtxH                 PF12732.2     74 sp|Q5HQQ4|Y494_STAEQ -             63    0.0023   18.2   4.5   1   1   7.2e-07    0.0027   18.0   4.5    31    74     2    56     1    56 0.90 YtxH-like protein
LEA_4                PF02987.11    44 sp|Q5HQQ4|Y494_STAEQ -             63    0.0037   17.0   7.5   1   2   0.00025      0.91    9.4   0.3    25    44     1    20     1    20 0.94 Late embryogenesis abundant protein
LEA_4                PF02987.11    44 sp|Q5HQQ4|Y494_STAEQ -             63    0.0037   17.0   7.5   2   2   8.4e-05      0.31   10.9   2.1     2    22    33    53    32    59 0.78 Late embryogenesis abundant protein
ATP-synt_B           PF00430.13   132 sp|Q5HQQ4|Y494_STAEQ -             63     0.022   14.5   1.3   1   1   8.1e-06      0.03   14.1   1.3    56   104     2    54     1    60 0.75 ATP synthase B/B' CF(0)
UPF0051              PF01458.12   230 sp|Q5HQP8|Y500_STAEQ -            465     4e-71  239.1   0.9   1   1   3.8e-75   5.7e-71  238.6   0.9     2   230   207   436   206   436 0.99 Uncharacterized protein family (UPF0051)
DUF1450              PF07293.6     78 sp|Q5HQM3|Y525_STAEQ -             81   4.1e-41  138.8   1.3   1   1   6.4e-45   4.7e-41  138.6   1.3     1    77     1    77     1    78 0.99 Protein of unknown function (DUF1450)
PADR1                PF08063.7     55 sp|Q5HQM3|Y525_STAEQ -             81     0.014   14.7   0.7   2   2   3.4e-06     0.025   13.9   0.3     7    25    30    48    26    54 0.87 PADR1 (NUC008) domain
Pyr_redox_2          PF07992.9    201 sp|Q5HQM1|Y527_STAEQ -            402   2.3e-14   53.7   0.4   1   1   1.8e-17   3.9e-14   53.0   0.4     1   198     7   305     7   308 0.78 Pyridine nucleotide-disulphide oxidoreductase
Pyr_redox            PF00070.22    80 sp|Q5HQM1|Y527_STAEQ -            402   7.9e-10   39.0   1.2   2   2   2.7e-10   5.7e-07   29.8   0.0     1    73   160   244   160   253 0.85 Pyridine nucleotide-disulphide oxidoreductase
DAO                  PF01266.19   358 sp|Q5HQM1|Y527_STAEQ -            402     1e-08   34.5   0.1   1   3   0.00011      0.23   10.3   0.0     1    39     7    49     7    53 0.90 FAD dependent oxidoreductase
DAO                  PF01266.19   358 sp|Q5HQM1|Y527_STAEQ -            402     1e-08   34.5   0.1   2   3     3e-05     0.064   12.1   0.0   136   205    50   115    47   134 0.91 FAD dependent oxidoreductase
DAO                  PF01266.19   358 sp|Q5HQM1|Y527_STAEQ -            402     1e-08   34.5   0.1   3   3   0.00022      0.47    9.3   0.0   148   214   213   278   209   334 0.86 FAD dependent oxidoreductase
Pyr_redox_3          PF13738.1    203 sp|Q5HQM1|Y527_STAEQ -            402   2.1e-06   27.9   1.5   2   3   2.8e-05     0.059   13.4   0.2    79   189    58   180    41   197 0.78 Pyridine nucleotide-disulphide oxidoreductase
NAD_binding_9        PF13454.1    156 sp|Q5HQM1|Y527_STAEQ -            402   6.7e-05   22.7   0.1   1   3   0.00015      0.32   10.7   0.0     2    48    10    55     9    62 0.88 FAD-NAD(P)-binding
NAD_binding_7        PF13241.1    103 sp|Q5HQM1|Y527_STAEQ -            402     0.032   14.4   0.3   1   1   3.4e-05     0.073   13.3   0.3     6    70     4    85     1   141 0.65 Putative NAD(P)-binding
FAA_hydrolase        PF01557.13   218 sp|Q5HQJ3|Y556_STAEQ -            301   1.2e-56  191.6   0.0   1   1   2.2e-60   1.6e-56  191.1   0.0     1   216    94   297    94   299 0.93 Fumarylacetoacetate (FAA) hydrolase family
KH_2                 PF07650.12    78 sp|Q5HQJ3|Y556_STAEQ -            301     0.022   14.2   0.1   1   2   1.6e-05      0.12   11.9   0.0    24    47   137   160   115   162 0.77 KH domain
DUF1516              PF07457.6    110 sp|Q5HQJ2|Y557_STAEQ -            133   1.2e-37  128.3  11.1   1   1   7.6e-41   1.4e-37  128.1  11.1     1   110     1   118     1   118 0.98 Protein of unknown function (DUF1516)
DUF4401              PF14351.1    326 sp|Q5HQJ2|Y557_STAEQ -            133    0.0013   17.8   7.6   1   1   8.2e-07    0.0015   17.5   7.6   143   254     3   118     1   123 0.73 Domain of unknown function (DUF4401)
DUF1129              PF06570.6    206 sp|Q5HQJ2|Y557_STAEQ -            133    0.0048   16.2   5.4   1   1   2.6e-06    0.0048   16.2   5.4    78   166    31   120    16   128 0.76 Protein of unknown function (DUF1129)
SirB                 PF04247.7    123 sp|Q5HQJ2|Y557_STAEQ -            133     0.011   15.5  10.4   1   1   8.5e-06     0.016   14.9  10.4     6   117     2   119     1   122 0.82 Invasion gene expression up-regulator, SirB
Glucos_trans_II      PF14264.1    319 sp|Q5HQJ2|Y557_STAEQ -            133     0.032   13.2   7.8   1   1     2e-05     0.037   13.0   7.8   171   291     4   119     1   129 0.68 Glucosyl transferase GtrII
DUF373               PF04123.8    344 sp|Q5HQJ2|Y557_STAEQ -            133     0.076   12.0   6.0   1   1   4.9e-05      0.09   11.7   6.0   232   340     5   114     1   119 0.72 Domain of unknown function (DUF373)
Ninjurin             PF04923.7    104 sp|Q5HQJ2|Y557_STAEQ -            133      0.21   11.3   3.7   2   2   0.00035      0.64    9.7   1.1    52   100    73   121    70   123 0.88 Ninjurin
7TMR-DISM_7TM        PF07695.6    205 sp|Q5HQJ2|Y557_STAEQ -            133      0.24   11.0  10.7   1   1   0.00026      0.49   10.0  10.7    73   180     6   124     1   132 0.54 7TM diverse intracellular signalling
Thioredoxin_5        PF13743.1    176 sp|Q5HQG8|Y581_STAEQ -            265   4.7e-48  163.0   0.9   1   1   1.6e-51   8.1e-48  162.2   0.9     1   175    27   189    27   190 0.97 Thioredoxin
DSBA                 PF01323.15   193 sp|Q5HQG8|Y581_STAEQ -            265   0.00066   19.2   0.4   1   1   1.9e-06    0.0094   15.5   0.4    83   172    73   166    25   178 0.79 DSBA-like thioredoxin domain
Thioredoxin_4        PF13462.1    163 sp|Q5HQG8|Y581_STAEQ -            265     0.038   14.0   0.3   1   1   1.5e-05     0.072   13.0   0.3    81   143   100   167    19   194 0.55 Thioredoxin
2_5_RNA_ligase2      PF13563.1    153 sp|Q5HQE9|Y604_STAEQ -            169   3.8e-19   68.8   0.1   1   1   1.3e-22   4.9e-19   68.5   0.1     2   149    10   153     9   157 0.88 2'-5' RNA ligase superfamily
LigT_PEase           PF02834.11    87 sp|Q5HQE9|Y604_STAEQ -            169   7.1e-13   48.3   0.0   1   2   1.8e-12   6.7e-09   35.6   0.0     2    80     9    78     7    83 0.91 LigT like Phosphoesterase
LigT_PEase           PF02834.11    87 sp|Q5HQE9|Y604_STAEQ -            169   7.1e-13   48.3   0.0   2   2   0.00011      0.39   10.7   0.0     8    40    89   119    85   133 0.89 LigT like Phosphoesterase
CPDase               PF07823.6    196 sp|Q5HQE9|Y604_STAEQ -            169   0.00013   21.5   1.0   1   2   4.9e-05      0.18   11.2   0.5    18   105    12    96     1   102 0.67 Cyclic phosphodiesterase-like protein
CPDase               PF07823.6    196 sp|Q5HQE9|Y604_STAEQ -            169   0.00013   21.5   1.0   2   2   6.9e-05      0.25   10.7   0.0    24    72    90   147    83   159 0.73 Cyclic phosphodiesterase-like protein
DUF3770              PF12603.3    250 sp|Q5HQE9|Y604_STAEQ -            169    0.0035   16.5   0.7   1   1   1.3e-06    0.0049   16.0   0.7    17    76    30    91    14    98 0.85 Protein of unknown function (DUF3770)
DUF1447              PF07288.6     69 sp|Q5HQ79|Y677_STAEQ -             72   2.3e-27   94.5   6.5   1   1   6.9e-31   2.6e-27   94.4   6.5     1    67     3    69     3    71 0.93 Protein of unknown function (DUF1447)
Img2                 PF05046.9     87 sp|Q5HQ79|Y677_STAEQ -             72     0.023   14.9   0.4   1   1   9.3e-06     0.034   14.3   0.1    55    87    11    43     3    43 0.89 Mitochondrial large subunit ribosomal protein (Img2)
DUF2118              PF09891.4    150 sp|Q5HQ79|Y677_STAEQ -             72     0.034   13.8   0.8   1   1   1.2e-05     0.043   13.5   0.5     6    39    24    57    19    71 0.86 Uncharacterized protein conserved in archaea (DUF2118)
Iso_dh               PF00180.15   348 sp|Q5HQ79|Y677_STAEQ -             72     0.076   11.9   0.2   1   1     2e-05     0.075   11.9   0.2   119   159    10    50     2    64 0.77 Isocitrate/isopropylmalate dehydrogenase
UPF0223              PF05256.7     88 sp|Q5HQ72|Y684_STAEQ -             92   8.3e-37  125.1   3.8   1   1   6.5e-41   9.7e-37  124.9   3.8     1    84     1    84     1    88 0.97 Uncharacterised protein family (UPF0223)
DUF1054              PF06335.7    194 sp|Q5HQ63|Y693_STAEQ -            203   1.5e-76  256.4   3.4   1   1   2.3e-80   1.7e-76  256.2   3.4     1   194     6   202     6   202 0.99 Protein of unknown function (DUF1054)
P22_AR_C             PF10548.4     74 sp|Q5HQ63|Y693_STAEQ -            203     0.047   13.5   0.1   1   2   2.6e-05      0.19   11.6   0.0    24    66    21    65    20    69 0.85 P22AR C-terminal domain
DUF1507              PF07408.6     91 sp|Q5HQ56|Y701_STAEQ -             91   1.4e-41  140.1   0.8   1   1   1.9e-45   1.4e-41  140.0   0.8     6    90     6    90     1    91 0.95 Protein of unknown function (DUF1507)
DUF2680              PF10925.3     59 sp|Q5HQ56|Y701_STAEQ -             91    0.0025   17.6   0.1   1   1   6.3e-07    0.0047   16.7   0.1    12    54    45    86    42    89 0.91 Protein of unknown function (DUF2680)
DUF2129              PF09902.4     71 sp|Q5HQ45|Y712_STAEQ -             83   5.9e-26   90.0   6.8   1   1   4.5e-30   6.7e-26   89.8   6.8     1    71     6    76     6    76 0.99 Uncharacterized protein conserved in bacteria (DUF2129)
HIGH_NTase1          PF05636.6    388 sp|Q5HQ41|Y716_STAEQ -            377  4.5e-119  397.9   9.1   1   1  1.4e-122  5.1e-119  397.7   9.1     1   387     1   374     1   375 0.95 HIGH Nucleotidyl Transferase
DIT1_PvcA            PF05141.7    278 sp|Q5HQ41|Y716_STAEQ -            377    0.0052   16.1   0.2   1   2   3.6e-06     0.013   14.7   0.1   112   209   180   278   133   284 0.84 Pyoverdine/dityrosine biosynthesis protein
RasGAP               PF00616.14   197 sp|Q5HQ41|Y716_STAEQ -            377     0.021   14.4   0.6   1   1   5.7e-06     0.021   14.4   0.6    14    68   260   314   247   367 0.80 GTPase-activator protein for Ras-like GTPase
CTP_transf_2         PF01467.21   157 sp|Q5HQ41|Y716_STAEQ -            377     0.037   14.0   0.2   1   1     3e-05      0.11   12.5   0.1     5    58     9    62     6    69 0.86 Cytidylyltransferase
DUF2317              PF10079.4    542 sp|Q5HQ15|Y742_STAEQ -            537  2.4e-176  587.5  14.2   1   1  5.4e-180  2.7e-176  587.3  14.2     1   541     1   536     1   537 0.99 Uncharacterized protein conserved in bacteria (DUF2317)
DUF4168              PF13767.1     78 sp|Q5HQ15|Y742_STAEQ -            537      0.25   12.0   8.5   3   3   0.00014       0.7   10.5   2.7     7    77   419   502   413   503 0.71 Domain of unknown function (DUF4168)
Cu-oxidase_4         PF02578.10   234 sp|Q5HQ05|Y752_STAEQ -            263   3.8e-58  196.3   0.0   1   1   5.9e-62   4.4e-58  196.1   0.0     1   233    26   261    26   262 0.98 Multi-copper polyphenol oxidoreductase laccase
LAGLIDADG_3          PF14528.1     77 sp|Q5HQ05|Y752_STAEQ -            263      0.11   12.7   0.5   1   1   4.3e-05      0.32   11.2   0.5    27    70   174   217   168   246 0.86 LAGLIDADG-like domain
UPF0122              PF04297.9    101 sp|Q5HPV5|Y802_STAEQ -            110   2.9e-39  133.1   9.3   1   1   3.6e-42   3.5e-39  132.8   9.3     2    96     7   101     6   106 0.94 Putative helix-turn-helix protein, YlxM / p13 like
Sigma70_r4           PF04545.11    50 sp|Q5HPV5|Y802_STAEQ -            110   8.9e-06   24.9   0.0   1   1   1.8e-08   1.8e-05   23.9   0.0     5    37    23    55    21    61 0.95 Sigma-70, region 4
Sigma70_r4_2         PF08281.7     54 sp|Q5HPV5|Y802_STAEQ -            110   2.3e-05   23.7   0.0   1   1   4.6e-08   4.5e-05   22.8   0.0    11    49    23    61    21    62 0.93 Sigma-70, region 4
HTH_11               PF08279.7     55 sp|Q5HPV5|Y802_STAEQ -            110   0.00063   19.3   0.0   1   1   1.4e-06    0.0014   18.1   0.0     4    37    29    60    26    61 0.82 HTH domain
Sigma70_ECF          PF07638.6    185 sp|Q5HPV5|Y802_STAEQ -            110     0.003   17.2   0.0   1   1   4.9e-06    0.0049   16.5   0.0   130   172    16    59     3    72 0.83 ECF sigma factor
HTH_23               PF13384.1     50 sp|Q5HPV5|Y802_STAEQ -            110    0.0042   16.7   0.0   1   1   7.9e-06    0.0078   15.8   0.0    14    40    35    61    24    66 0.84 Homeodomain-like domain
Sipho_Gp157          PF05565.6    162 sp|Q5HPV5|Y802_STAEQ -            110    0.0059   16.1   0.9   1   1   7.8e-06    0.0077   15.8   0.9     7    86    27   105    21   109 0.83 Siphovirus Gp157
Terminase_5          PF06056.7     58 sp|Q5HPV5|Y802_STAEQ -            110     0.011   15.2   0.0   1   1   1.9e-05     0.019   14.5   0.0     8    32    33    57    28    64 0.88 Putative ATPase subunit of terminase (gpP-like)
HTH_38               PF13936.1     44 sp|Q5HPV5|Y802_STAEQ -            110     0.011   15.2   0.1   1   1   3.6e-05     0.036   13.6   0.0     5    43    23    61    20    62 0.94 Helix-turn-helix domain
CorA                 PF01544.13   292 sp|Q5HPV5|Y802_STAEQ -            110     0.028   13.4   4.0   1   1   3.1e-05     0.031   13.3   4.0    91   179    15   104     4   110 0.88 CorA-like Mg2+ transporter protein
HTH_Tnp_4            PF13613.1     53 sp|Q5HPV5|Y802_STAEQ -            110      0.03   13.8   0.4   1   1   7.3e-05     0.072   12.6   0.0     6    47    26    66    20    68 0.81 Helix-turn-helix of DDE superfamily endonuclease
HTH_10               PF04967.7     53 sp|Q5HPV5|Y802_STAEQ -            110     0.031   13.8   0.0   1   1   0.00013      0.13   11.9   0.0    23    46    38    61    35    64 0.92 HTH DNA binding domain
HTH_28               PF13518.1     52 sp|Q5HPV5|Y802_STAEQ -            110     0.046   13.7   0.0   1   1   0.00012      0.12   12.3   0.0     9    35    35    61    29    64 0.88 Helix-turn-helix domain
HTH_7                PF02796.10    45 sp|Q5HPV5|Y802_STAEQ -            110     0.062   13.1   0.0   1   1   0.00015      0.15   11.9   0.0    19    39    36    56    21    56 0.83 Helix-turn-helix domain of resolvase
DUF2481              PF10654.4    126 sp|Q5HPV5|Y802_STAEQ -            110      0.17   11.5   2.8   1   2   0.00032      0.32   10.6   0.9    82   125    40    87    11    88 0.72 Protein of unknown function (DUF2481)
DUF896               PF05979.7     65 sp|Q5HPK0|Y911_STAEQ -             78   9.5e-32  108.3   4.7   1   1   3.2e-35   1.2e-31  108.1   4.7     3    65     7    69     5    69 0.98 Bacterial protein of unknown function (DUF896)
HTH_25               PF13413.1     62 sp|Q5HPK0|Y911_STAEQ -             78     0.027   14.1   0.2   1   1   1.1e-05      0.04   13.5   0.2     7    29    19    41    13    53 0.88 Helix-turn-helix domain
HTH_3                PF01381.17    55 sp|Q5HPK0|Y911_STAEQ -             78     0.036   13.9   0.4   1   2   3.7e-05      0.14   12.0   0.2     2    32    15    45     5    56 0.82 Helix-turn-helix
Fungal_trans_2       PF11951.3    383 sp|Q5HPK0|Y911_STAEQ -             78     0.094   11.3   0.4   1   1   2.6e-05     0.097   11.2   0.4   198   249     8    59     6    76 0.86 Fungal specific transcription factor domain
UPF0154              PF03672.8     64 sp|Q5HPJ7|Y914_STAEQ -             75   6.4e-28   96.1  11.3   1   1   3.3e-31   8.2e-28   95.8  11.3     1    62     8    69     8    71 0.97 Uncharacterised protein family (UPF0154)
DUF4282              PF14110.1     90 sp|Q5HPJ7|Y914_STAEQ -             75      0.03   14.5   0.1   1   1   1.4e-05     0.035   14.2   0.1    19    45     4    55     2    68 0.78 Domain of unknown function (DUF4282)
SNARE_assoc          PF09335.6    123 sp|Q5HPJ7|Y914_STAEQ -             75     0.032   14.4   0.0   1   1   1.4e-05     0.036   14.2   0.0    16    67     3    68     1    73 0.76 SNARE associated Golgi protein
DUF2621              PF11084.3    141 sp|Q5HPJ7|Y914_STAEQ -             75     0.049   13.2   1.3   1   1   2.2e-05     0.055   13.1   1.3    10    39     6    35     1    69 0.74 Protein of unknown function (DUF2621)
Glycophorin_A        PF01102.13   122 sp|Q5HPJ7|Y914_STAEQ -             75     0.086   12.6   1.5   1   1   3.7e-05     0.092   12.5   1.5    65    96     6    38     4    73 0.78 Glycophorin A
DUF4064              PF13273.1    100 sp|Q5HPJ7|Y914_STAEQ -             75       8.3    6.5   9.2   1   1   0.00035      0.87    9.7   3.9    57    82     2    27     1    33 0.86 Protein of unknown function (DUF4064)
Fe-S_biosyn          PF01521.15   112 sp|Q5HPI8|Y923_STAEQ -             98    0.0031   17.4   0.2   1   1   2.7e-07     0.004   17.0   0.2     1    88     1    86     1    95 0.79 Iron-sulphur cluster biosynthesis
Tautomerase          PF01361.16    60 sp|Q5HPH8|Y934_STAEQ -             61     8e-23   79.8   0.4   1   1   1.7e-26   8.5e-23   79.7   0.4     1    59     2    60     2    61 0.98 Tautomerase enzyme
Tautomerase_2        PF14552.1     82 sp|Q5HPH8|Y934_STAEQ -             61   1.9e-05   24.6   0.0   1   1   4.1e-09     2e-05   24.4   0.0    31    80     3    52     1    54 0.94 Tautomerase enzyme
DUF1904              PF08921.6    108 sp|Q5HPH8|Y934_STAEQ -             61     0.076   13.0   0.0   1   1   1.7e-05     0.084   12.9   0.0    56   106     2    55     1    57 0.80 Domain of unknown function (DUF1904)
Peptidase_M20        PF01546.23   189 sp|Q5HPE4|Y968_STAEQ -            383   1.1e-30  106.5   0.4   1   1   1.8e-34   1.4e-30  106.2   0.4     1   189    63   379    63   379 0.91 Peptidase family M20/M25/M40
M20_dimer            PF07687.9    112 sp|Q5HPE4|Y968_STAEQ -            383   3.8e-06   26.6   0.2   1   2   2.2e-08   0.00016   21.3   0.1    13   107   184   273   172   275 0.85 Peptidase dimerisation domain
AAA_5                PF07728.9    139 sp|Q5HPD3|Y979_STAEQ -            263   2.5e-29  101.7   0.0   1   1   6.7e-32     4e-29  101.1   0.0     1   139    26   164    26   164 0.96 AAA domain (dynein-related subfamily)
AAA_3                PF07726.6    131 sp|Q5HPD3|Y979_STAEQ -            263   4.4e-12   45.7   0.0   1   1   1.5e-14   8.8e-12   44.7   0.0     2   130    27   165    26   166 0.87 ATPase family associated with various cellular activities (AAA)
CbbQ_C               PF08406.5     86 sp|Q5HPD3|Y979_STAEQ -            263   3.3e-06   27.0   0.4   1   1   8.8e-09   5.2e-06   26.3   0.4     4    80   180   258   178   263 0.83 CbbQ/NirQ/NorQ C-terminal
AAA                  PF00004.24   132 sp|Q5HPD3|Y979_STAEQ -            263   9.2e-06   25.8   0.1   1   1   3.6e-08   2.1e-05   24.6   0.0     1    70    27   107    27   169 0.83 ATPase family associated with various cellular activities (AAA)
Sigma54_activat      PF00158.21   168 sp|Q5HPD3|Y979_STAEQ -            263   9.4e-06   25.1   0.0   1   1   6.2e-08   3.7e-05   23.2   0.0     6   113     8   115     4   149 0.68 Sigma-54 interaction domain
AAA_14               PF13173.1    128 sp|Q5HPD3|Y979_STAEQ -            263   1.8e-05   24.6   0.0   1   1   7.9e-08   4.7e-05   23.2   0.0     2    96    24   131    23   157 0.71 AAA domain
RuvB_N               PF05496.7    234 sp|Q5HPD3|Y979_STAEQ -            263   5.2e-05   22.4   0.3   1   2     3e-05     0.018   14.0   0.0    41   108    15    86     2    88 0.68 Holliday junction DNA helicase ruvB N-terminus
AAA_2                PF07724.9    171 sp|Q5HPD3|Y979_STAEQ -            263   9.1e-05   22.4   1.2   1   1   3.3e-07    0.0002   21.3   0.1     5    82    26   109    23   118 0.67 AAA domain (Cdc48 subfamily)
T2SE                 PF00437.15   272 sp|Q5HPD3|Y979_STAEQ -            263   9.1e-05   21.4   0.1   1   2   5.6e-07   0.00033   19.6   0.0   124   153    20    49     3    62 0.81 Type II/IV secretion system protein
Mg_chelatase         PF01078.16   207 sp|Q5HPD3|Y979_STAEQ -            263   0.00089   18.4   0.2   1   1   1.1e-05    0.0065   15.6   0.2    23    48    25    50    21   163 0.90 Magnesium chelatase, subunit ChlI
AAA_6                PF12774.2    231 sp|Q5HPD3|Y979_STAEQ -            263   0.00092   18.8   0.0   2   2    0.0013      0.75    9.2   0.0   123   164   128   169   102   213 0.81 Hydrolytic ATP binding site of dynein motor region D1
AAA_17               PF13207.1    121 sp|Q5HPD3|Y979_STAEQ -            263    0.0013   19.5   0.0   1   1   4.1e-06    0.0024   18.6   0.0     2    45    27    75    26   259 0.83 AAA domain
IstB_IS21            PF01695.12   178 sp|Q5HPD3|Y979_STAEQ -            263     0.002   17.5   0.0   1   1   8.2e-06    0.0049   16.3   0.0    46    69    23    46     6    55 0.86 IstB-like ATP binding protein
Sigma54_activ_2      PF14532.1    138 sp|Q5HPD3|Y979_STAEQ -            263    0.0025   17.8   0.0   1   1   1.5e-05    0.0086   16.1   0.0    10    47    13    50     9   126 0.71 Sigma-54 interaction domain
AAA_PrkA             PF08298.6    358 sp|Q5HPD3|Y979_STAEQ -            263    0.0056   15.4   0.2   1   2   0.00065      0.39    9.3   0.0    80   114    17    50    10    66 0.78 PrkA AAA domain
DEAD                 PF00270.24   169 sp|Q5HPD3|Y979_STAEQ -            263     0.012   15.1   0.0   1   1   2.7e-05     0.016   14.7   0.0    14    69    24   201    11   248 0.65 DEAD/DEAH box helicase
AAA_29               PF13555.1     62 sp|Q5HPD3|Y979_STAEQ -            263     0.013   14.9   0.0   1   1   4.4e-05     0.026   14.0   0.0    15    47    17    48    12    58 0.75 P-loop containing region of AAA domain
ResIII               PF04851.10   184 sp|Q5HPD3|Y979_STAEQ -            263     0.014   15.2   0.0   1   1   5.2e-05     0.031   14.1   0.0    21    43    22    42     3    85 0.82 Type III restriction enzyme, res subunit
Zeta_toxin           PF06414.7    201 sp|Q5HPD3|Y979_STAEQ -            263     0.015   14.3   0.0   1   1   6.8e-05      0.04   12.9   0.0    14    42    22    53    10    64 0.74 Zeta toxin
ABC_tran             PF00005.22   137 sp|Q5HPD3|Y979_STAEQ -            263     0.019   15.2   0.2   1   1   0.00019      0.11   12.7   0.0     8    42    21    55    14   104 0.78 ABC transporter
AAA_16               PF13191.1    185 sp|Q5HPD3|Y979_STAEQ -            263     0.023   14.7   0.4   1   1   0.00025      0.15   12.0   0.0    25    46    25    46    12    72 0.84 AAA ATPase domain
AAA_18               PF13238.1    129 sp|Q5HPD3|Y979_STAEQ -            263     0.064   13.5   0.3   1   1   0.00011     0.064   13.5   0.3     1    21    27    47    27   138 0.68 AAA domain
UPF0079              PF02367.12   123 sp|Q5HPD3|Y979_STAEQ -            263     0.076   12.6   0.0   1   1   0.00028      0.17   11.5   0.0    13    39    22    48    12    59 0.82 Uncharacterised P-loop hydrolase UPF0079
AAA_22               PF13401.1    131 sp|Q5HPD3|Y979_STAEQ -            263      0.26   11.4   2.7   1   1    0.0005       0.3   11.2   0.2     6    26    26    46    21   127 0.80 AAA domain
DUF1250              PF06855.7     46 sp|Q5HPB6|Y997_STAEQ -             74   1.2e-16   59.8   3.7   2   2   8.4e-21   1.2e-16   59.8   3.7     1    45    24    68    24    69 0.98 Protein of unknown function (DUF1250)
DUF972               PF06156.8    107 sp|Q5HRR9|YABA_STAEQ -            115   7.1e-34  116.3   6.1   1   1     9e-37   7.9e-34  116.2   6.1     1   107     1   111     1   111 0.96 Protein of unknown function (DUF972)
DUF2570              PF10828.3    110 sp|Q5HRR9|YABA_STAEQ -            115    0.0053   16.3   0.5   1   1   7.3e-06    0.0063   16.0   0.5    49   109    28    85     8    86 0.85 Protein of unknown function (DUF2570)
Spc7                 PF08317.6    326 sp|Q5HRR9|YABA_STAEQ -            115      0.01   14.5   4.2   1   1   1.5e-05     0.013   14.2   4.2   152   211     4    63     3    76 0.88 Spc7 kinetochore protein
DUF1515              PF07439.6    112 sp|Q5HRR9|YABA_STAEQ -            115      0.02   14.7   0.6   1   1   4.3e-05     0.037   13.8   0.2    43    73     4    34     1    40 0.91 Protein of unknown function (DUF1515)
APG6                 PF04111.7    315 sp|Q5HRR9|YABA_STAEQ -            115     0.026   13.5   1.9   1   1   3.2e-05     0.028   13.4   1.9    59   126     3    67     1    99 0.62 Autophagy protein Apg6
DUF4142              PF13628.1    139 sp|Q5HRR9|YABA_STAEQ -            115      0.04   13.9   0.6   1   1   7.8e-05     0.068   13.1   0.6    96   134    26    64    14    66 0.88 Domain of unknown function (DUF4142)
Microtub_assoc       PF07989.6     75 sp|Q5HRR9|YABA_STAEQ -            115     0.054   13.3   5.6   2   2   0.00022      0.19   11.5   5.2    35    68    28    61    11    69 0.81 Microtubule associated
TSC22                PF01166.13    60 sp|Q5HRR9|YABA_STAEQ -            115     0.057   13.3   5.7   2   2   6.3e-05     0.055   13.4   3.7    18    46    26    54    17    65 0.91 TSC-22/dip/bun family
MotCF                PF09158.5    103 sp|Q5HRR9|YABA_STAEQ -            115     0.064   12.9   0.5   1   1    0.0001     0.091   12.4   0.5     1    31    20    47    20    70 0.79 Bacteriophage T4 MotA, C-terminal
GerPC                PF10737.4    176 sp|Q5HRR9|YABA_STAEQ -            115     0.067   12.9   2.8   2   2   0.00014      0.12   12.1   1.0    53   102    23    73    21    86 0.80 Spore germination protein GerPC
DUF904               PF06005.7     72 sp|Q5HRR9|YABA_STAEQ -            115      0.26   11.6   8.4   1   1   0.00054      0.47   10.7   8.4    18    57     8    54     4    84 0.57 Protein of unknown function (DUF904)
HALZ                 PF02183.13    45 sp|Q5HRR9|YABA_STAEQ -            115      0.37   10.5   6.8   2   2   0.00055      0.48   10.1   1.5    17    44    34    61    32    62 0.88 Homeobox associated leucine zipper
NYD-SP28_assoc       PF14775.1     60 sp|Q5HRR9|YABA_STAEQ -            115       1.1    8.9   6.2   1   1   0.00017      0.15   11.8   1.2    37    58    33    54    31    55 0.93 Sperm tail C-terminal domain
UPF0054              PF02130.12   145 sp|Q5HNX7|YBEY_STAEQ -            155   1.8e-45  153.8   0.5   1   1   2.6e-49     2e-45  153.6   0.5    17   145    19   151     4   151 0.93 Uncharacterized protein family UPF0054
Peptidase_M10        PF00413.19   154 sp|Q5HNX7|YBEY_STAEQ -            155      0.21   11.2   1.9   1   1   7.2e-05      0.54    9.9   1.8    40   126    25   135     9   143 0.65 Matrixin
60KD_IMP             PF02096.15   198 sp|Q5HLG6|YIDC1_STAEQ -            278   1.2e-43  149.1  10.9   1   1   1.2e-47   1.7e-43  148.5  10.9     2   197    53   249    52   250 0.91 60Kd inner membrane protein
60KD_IMP             PF02096.15   198 sp|Q5HMD1|YIDC2_STAEQ -            290   1.2e-49  168.7  14.7   1   2   3.1e-53   1.2e-49  168.7  14.7     1   197    54   251    54   252 0.90 60Kd inner membrane protein
GP41                 PF00517.12   204 sp|Q5HMD1|YIDC2_STAEQ -            290     0.022   14.3   1.4   1   2   1.5e-05     0.056   13.0   0.0   141   193    33    92    21   115 0.82 Retroviral envelope protein
DUF4446              PF14584.1    152 sp|Q5HMD1|YIDC2_STAEQ -            290         5    6.9   6.2   1   3   0.00023      0.87    9.4   0.6     7    74    57   124    54   134 0.76 Protein of unknown function (DUF4446)
Haemolytic           PF01809.13    68 sp|Q5HNB4|YIDD_STAEQ -             82   6.5e-33  112.1   0.3   1   1     5e-37   7.4e-33  111.9   0.3     1    68     1    68     1    68 0.99 Haemolytic domain
ADH_zinc_N           PF00107.21   130 sp|Q5HM44|ZDH1_STAEQ -            336   7.7e-13   48.1   0.0   1   1   3.8e-16   1.4e-12   47.2   0.0     1    92   160   249   160   277 0.90 Zinc-binding dehydrogenase
ADH_zinc_N_2         PF13602.1    127 sp|Q5HM44|ZDH1_STAEQ -            336   2.3e-09   38.1   0.0   2   2   2.5e-12   9.3e-09   36.2   0.0     1   127   192   333   192   333 0.79 Zinc-binding dehydrogenase
ADH_N                PF08240.7    109 sp|Q5HM44|ZDH1_STAEQ -            336     8e-09   35.2   0.0   1   1   5.2e-12   1.9e-08   34.0   0.0     2    61    31    87    30   111 0.91 Alcohol dehydrogenase GroES-like domain
TrkA_N               PF02254.13   116 sp|Q5HM44|ZDH1_STAEQ -            336      0.04   13.9   0.0   1   1   3.5e-05      0.13   12.2   0.0     2   109   154   261   153   266 0.82 TrkA-N domain
