#                                                                            --- full sequence --- -------------- this domain -------------   hmm coord   ali coord   env coord
# target name        accession   tlen query name           accession   qlen   E-value  score  bias   #  of  c-Evalue  i-Evalue  score  bias  from    to  from    to  from    to  acc description of target
#------------------- ---------- ----- -------------------- ---------- ----- --------- ------ ----- --- --- --------- --------- ------ ----- ----- ----- ----- ----- ----- ----- ---- ---------------------
NMO                  PF03060.10   330 sp|O05413|2NPD_BACSU -            347  3.4e-115  384.7   0.0   1   1  1.8e-118  3.8e-115  384.5   0.0     3   330     4   343     1   343 0.95 Nitronate monooxygenase
IMPDH                PF00478.20   352 sp|O05413|2NPD_BACSU -            347   2.4e-08   33.2   0.2   1   2   6.7e-05      0.14   11.0   0.0    31   129     5   173     1   182 0.77 IMP dehydrogenase / GMP reductase domain
IMPDH                PF00478.20   352 sp|O05413|2NPD_BACSU -            347   2.4e-08   33.2   0.2   2   2   1.4e-07    0.0003   19.7   0.5   205   255   199   249   188   259 0.88 IMP dehydrogenase / GMP reductase domain
NanE                 PF04131.9    192 sp|O05413|2NPD_BACSU -            347   1.5e-05   24.0   0.0   1   1   1.5e-08   3.2e-05   22.9   0.0    81   176   133   237    97   246 0.84 Putative N-acetylmannosamine-6-phosphate epimerase
His_biosynth         PF00977.16   229 sp|O05413|2NPD_BACSU -            347   0.00056   19.2   0.2   1   2   1.5e-06    0.0031   16.8   0.3   183   224   197   238   192   243 0.90 Histidine biosynthesis protein
FMN_dh               PF01070.13   357 sp|O05413|2NPD_BACSU -            347    0.0011   17.9   0.8   2   2   8.5e-07    0.0018   17.1   0.3   234   314   152   239   121   269 0.84 FMN-dependent dehydrogenase
DUF561               PF04481.7    243 sp|O05413|2NPD_BACSU -            347     0.012   14.5   0.1   1   1   9.6e-06      0.02   13.8   0.1   175   217   194   237   149   255 0.79 Protein of unknown function (DUF561)
TMP-TENI             PF02581.12   180 sp|O05413|2NPD_BACSU -            347     0.062   12.4   0.9   1   1   7.4e-05      0.16   11.0   0.9   129   179   185   236   128   237 0.69 Thiamine monophosphate synthase/TENI
HhH-GPD              PF00730.20   108 sp|P37878|3MGA_BACSU -            303   8.1e-15   55.0   0.0   1   1   2.7e-18   1.3e-14   54.3   0.0     4   106   138   287   135   289 0.97 HhH-GPD superfamily base excision DNA repair protein
OGG_N                PF07934.7    117 sp|P37878|3MGA_BACSU -            303   4.4e-13   49.2   0.0   1   1   1.4e-16   7.2e-13   48.5   0.0    31   117    43   134    11   134 0.84 8-oxoguanine DNA glycosylase, N-terminal domain
AlkA_N               PF06029.6    116 sp|P37878|3MGA_BACSU -            303     3e-05   24.0   0.0   1   1   1.1e-08   5.5e-05   23.2   0.0    10   114    18   127    10   129 0.87 AlkA N-terminal domain
Pur_DNA_glyco        PF02245.11   184 sp|P94378|3MGH_BACSU -            196   4.9e-63  211.5   0.0   1   1   3.7e-67   5.5e-63  211.4   0.0     3   184    11   193     9   193 0.98 Methylpurine-DNA glycosylase (MPG)
Tautomerase          PF01361.16    60 sp|P70994|4OT_BACSU  -             62   1.3e-23   82.3   0.2   1   1   4.8e-27   1.4e-23   82.2   0.2     1    59     2    60     2    61 0.98 Tautomerase enzyme
Tautomerase_2        PF14552.1     82 sp|P70994|4OT_BACSU  -             62   3.3e-08   33.4   0.1   1   1   1.2e-11   3.6e-08   33.3   0.1    31    79     3    51     1    54 0.94 Tautomerase enzyme
DUF1904              PF08921.6    108 sp|P70994|4OT_BACSU  -             62     0.001   19.0   0.1   1   1   3.7e-07    0.0011   18.9   0.1    56   107     2    56     1    57 0.88 Domain of unknown function (DUF1904)
Linker_histone       PF00538.14    77 sp|P70994|4OT_BACSU  -             62     0.038   14.0   0.1   1   1   1.3e-05      0.04   14.0   0.1     6    37    18    49    13    60 0.85 linker histone H1 and H5 family
GAD                  PF02938.9     95 sp|P70994|4OT_BACSU  -             62     0.047   13.8   0.0   1   1   1.7e-05     0.049   13.7   0.0    46    85     4    44     1    53 0.84 GAD domain
NT5C                 PF06941.7    191 sp|P68522|53DR_BACSU -            172   3.4e-35  121.2   2.4   1   1   5.3e-39   3.9e-35  121.0   2.4     3   184     4   170     2   172 0.93 5' nucleotidase, deoxy (Pyrimidine), cytosolic type C protein (NT5C)
Miro                 PF08477.8    119 sp|P68522|53DR_BACSU -            172     0.084   13.3   0.0   1   1   2.3e-05      0.17   12.4   0.0    57   117    67   121    32   122 0.81 Miro-like protein
6PGD                 PF00393.14   291 sp|P12013|6PGDH_BACSU -            468  3.8e-130  433.3   0.0   1   1  3.1e-133  4.6e-130  433.0   0.0     1   291   177   467   177   467 0.99 6-phosphogluconate dehydrogenase, C-terminal domain
NAD_binding_2        PF03446.10   163 sp|P12013|6PGDH_BACSU -            468   8.4e-52  175.2   0.0   1   1   7.8e-55   1.2e-51  174.8   0.0     2   163     3   173     2   173 0.96 NAD binding domain of 6-phosphogluconate dehydrogenase
3HCDH_N              PF02737.13   180 sp|P12013|6PGDH_BACSU -            468   2.5e-05   24.0   0.0   1   1   3.1e-08   4.5e-05   23.1   0.0     2    44     5    47     4    71 0.88 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain
NAD_Gly3P_dh_N       PF01210.18   157 sp|P12013|6PGDH_BACSU -            468   8.9e-05   22.2   0.0   1   1   1.9e-07   0.00028   20.6   0.0     1   120     4   117     4   141 0.74 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus
ApbA                 PF02558.11   151 sp|P12013|6PGDH_BACSU -            468     0.002   17.6   0.0   1   1   2.5e-06    0.0037   16.7   0.0     1    98     5    97     5   114 0.73 Ketopantoate reductase PanE/ApbA
F420_oxidored        PF03807.12    96 sp|P12013|6PGDH_BACSU -            468     0.004   17.5   0.0   1   1     6e-06    0.0089   16.4   0.0     2    47     5    46     4    99 0.67 NADP oxidoreductase coenzyme F420-dependent
Shikimate_DH         PF01488.15   135 sp|P12013|6PGDH_BACSU -            468    0.0082   16.2   0.0   1   1   1.2e-05     0.018   15.1   0.0    15    84     5    75     3   103 0.79 Shikimate / quinate 5-dehydrogenase
2-Hacid_dh_C         PF02826.14   178 sp|P12013|6PGDH_BACSU -            468     0.012   14.7   0.1   1   2   8.4e-05      0.13   11.4   0.0    38    73     4    39     3    63 0.78 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain
IlvN                 PF07991.7    165 sp|P12013|6PGDH_BACSU -            468     0.025   13.9   0.1   1   2   0.00015      0.22   10.9   0.0     6    38     4    36     2   110 0.72 Acetohydroxy acid isomeroreductase, catalytic domain
PGK                  PF00162.14   384 sp|P12013|6PGDH_BACSU -            468       0.1   11.1   0.0   1   1   0.00011      0.17   10.4   0.0   175   222    54   101    34   105 0.86 Phosphoglycerate kinase
6PGD                 PF00393.14   291 sp|P80859|6PGD_BACSU -            469  7.2e-143  475.0   0.0   1   1  5.9e-146  9.7e-143  474.6   0.0     1   291   178   468   178   468 0.99 6-phosphogluconate dehydrogenase, C-terminal domain
NAD_binding_2        PF03446.10   163 sp|P80859|6PGD_BACSU -            469   4.4e-56  189.2   0.1   1   1   4.8e-59   7.9e-56  188.3   0.1     1   162     3   173     3   174 0.96 NAD binding domain of 6-phosphogluconate dehydrogenase
F420_oxidored        PF03807.12    96 sp|P80859|6PGD_BACSU -            469   5.2e-05   23.5   0.1   1   1   1.1e-07   0.00018   21.8   0.1     1    92     5    99     5   103 0.80 NADP oxidoreductase coenzyme F420-dependent
2-Hacid_dh_C         PF02826.14   178 sp|P80859|6PGD_BACSU -            469    0.0025   16.9   0.1   1   1   3.2e-06    0.0052   15.9   0.1    35   124     2    98     1   137 0.68 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain
3HCDH_N              PF02737.13   180 sp|P80859|6PGD_BACSU -            469    0.0054   16.4   0.1   1   1   5.8e-06    0.0096   15.5   0.1     1    44     5    48     5    84 0.84 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain
Shikimate_DH         PF01488.15   135 sp|P80859|6PGD_BACSU -            469      0.01   15.9   0.1   1   1   1.4e-05     0.023   14.7   0.1    11    67     2    58     1    81 0.83 Shikimate / quinate 5-dehydrogenase
ApbA                 PF02558.11   151 sp|P80859|6PGD_BACSU -            469     0.011   15.1   0.0   1   1   1.3e-05     0.021   14.2   0.0     1    97     6    97     6   113 0.77 Ketopantoate reductase PanE/ApbA
IlvN                 PF07991.7    165 sp|P80859|6PGD_BACSU -            469     0.021   14.1   0.0   1   1   3.5e-05     0.058   12.7   0.0     3    50     2    50     1    98 0.77 Acetohydroxy acid isomeroreductase, catalytic domain
NAD_binding_11       PF14833.1    122 sp|P80859|6PGD_BACSU -            469     0.042   13.9   0.0   1   1   0.00012       0.2   11.6   0.0     1    42   176   218   176   230 0.91 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase
Lactonase            PF10282.4    345 sp|O34499|6PGL_BACSU -            349    5e-132  440.1   0.7   1   1  2.3e-135  5.6e-132  440.0   0.7     2   345     6   345     5   345 0.99 Lactonase, 7-bladed beta-propeller
DUF1900              PF08954.6    136 sp|O34499|6PGL_BACSU -            349     0.024   14.1   0.1   2   2   0.00017      0.41   10.1   0.0    17    56   251   290   239   322 0.79 Domain of unknown function (DUF1900)
AA_permease          PF00324.16   478 sp|O06005|AAPA_BACSU -            462  3.6e-111  371.8  44.5   1   1  5.4e-115    4e-111  371.6  44.5     1   472    24   458    24   462 0.97 Amino acid permease
AA_permease_2        PF13520.1    426 sp|O06005|AAPA_BACSU -            462   1.8e-44  151.9  51.0   1   1   3.2e-48   2.4e-44  151.5  51.0     8   419    27   446    23   451 0.86 Amino acid permease
Aminotran_1_2        PF00155.16   363 sp|P53001|AAT1_BACSU -            393   3.3e-82  276.3   0.0   1   1   2.1e-85   3.8e-82  276.1   0.0     2   363    31   385    30   385 0.98 Aminotransferase class I and II
DegT_DnrJ_EryC1      PF01041.12   363 sp|P53001|AAT1_BACSU -            393   1.1e-12   47.7   0.0   1   1     1e-15   1.9e-12   46.9   0.0    49   146    96   202    75   203 0.85 DegT/DnrJ/EryC1/StrS aminotransferase family
Beta_elim_lyase      PF01212.16   290 sp|P53001|AAT1_BACSU -            393   1.7e-06   27.4   0.0   1   1   1.5e-09   2.8e-06   26.7   0.0    11   164    48   202    41   204 0.84 Beta-eliminating lyase
Aminotran_5          PF00266.14   371 sp|P53001|AAT1_BACSU -            393     6e-05   21.9   0.0   1   2   1.7e-07   0.00031   19.6   0.0    56   175    86   202    43   205 0.75 Aminotransferase class-V
Cys_Met_Meta_PP      PF01053.15   386 sp|P53001|AAT1_BACSU -            393     0.003   15.9   0.0   1   1   2.4e-06    0.0045   15.3   0.0   119   178   143   203    48   207 0.76 Cys/Met metabolism PLP-dependent enzyme
OKR_DC_1             PF01276.15   417 sp|P53001|AAT1_BACSU -            393     0.019   13.5   0.0   1   1   1.4e-05     0.026   13.0   0.0    64   154    65   163    49   190 0.79 Orn/Lys/Arg decarboxylase, major domain
Aminotran_3          PF00202.16   339 sp|P53001|AAT1_BACSU -            393     0.056   12.2   0.0   1   1   4.5e-05     0.084   11.7   0.0   159   219   146   204    93   216 0.73 Aminotransferase class-III
PfkB                 PF00294.19   301 sp|P53001|AAT1_BACSU -            393     0.097   11.7   0.0   2   2   0.00029      0.54    9.3   0.0   143   213   285   349   252   359 0.72 pfkB family carbohydrate kinase
Aminotran_1_2        PF00155.16   363 sp|P39643|AAT2_BACSU -            399   6.1e-79  265.6   0.0   1   1   1.4e-82   6.9e-79  265.4   0.0     2   363    33   384    32   384 0.95 Aminotransferase class I and II
Alliinase_C          PF04864.8    363 sp|P39643|AAT2_BACSU -            399   1.4e-05   23.9   0.0   2   2   1.2e-06    0.0062   15.2   0.0   313   362   336   387   292   388 0.79 Allinase
Cys_Met_Meta_PP      PF01053.15   386 sp|P39643|AAT2_BACSU -            399     0.062   11.5   0.0   1   1   1.8e-05     0.089   11.0   0.0   127   181   154   210    89   221 0.66 Cys/Met metabolism PLP-dependent enzyme
Aminotran_1_2        PF00155.16   363 sp|O07587|AAT3_BACSU -            393   2.3e-52  178.1   0.0   1   1     8e-56     3e-52  177.7   0.0     3   358    39   380    37   383 0.93 Aminotransferase class I and II
Aminotran_5          PF00266.14   371 sp|O07587|AAT3_BACSU -            393   4.4e-07   28.9   0.0   1   1   1.8e-10   6.5e-07   28.4   0.0    44   161    75   190    64   201 0.85 Aminotransferase class-V
DegT_DnrJ_EryC1      PF01041.12   363 sp|O07587|AAT3_BACSU -            393   0.00013   21.1   0.0   1   1   5.2e-08   0.00019   20.5   0.0    16   118    73   173    58   175 0.83 DegT/DnrJ/EryC1/StrS aminotransferase family
Cys_Met_Meta_PP      PF01053.15   386 sp|O07587|AAT3_BACSU -            393    0.0029   15.9   0.0   1   1   1.1e-06    0.0042   15.4   0.0    73   157   100   185    46   232 0.84 Cys/Met metabolism PLP-dependent enzyme
ACCA                 PF03255.9    145 sp|O34847|ACCA_BACSU -            325   4.4e-67  224.1   1.3   1   2   9.6e-71   4.8e-67  224.0   0.1     3   145     5   147     3   147 0.99 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit
Carboxyl_trans       PF01039.17   493 sp|O34847|ACCA_BACSU -            325   2.4e-18   65.7   0.0   1   1   5.5e-22   2.7e-18   65.6   0.0   265   429    63   252    23   310 0.81 Carboxyl transferase domain
MdcE                 PF06833.6    234 sp|O34847|ACCA_BACSU -            325   2.8e-06   26.6   0.0   1   1   7.2e-10   3.6e-06   26.3   0.0    11   207    89   284    73   311 0.74 Malonate decarboxylase gamma subunit (MdcE)
Carboxyl_trans       PF01039.17   493 sp|C0SP93|ACCD_BACSU -            290   8.3e-20   70.5   1.3   2   2   9.6e-23   1.8e-19   69.5   1.3    10   181    62   243    59   271 0.86 Carboxyl transferase domain
RNA_POL_M_15KD       PF02150.11    35 sp|C0SP93|ACCD_BACSU -            290   0.00015   21.3   3.8   1   1   1.3e-07   0.00024   20.7   3.8     4    32    32    60    29    63 0.89 RNA polymerases M/15 Kd subunit
DUF2387              PF09526.5     71 sp|C0SP93|ACCD_BACSU -            290   0.00038   20.3   1.0   1   1   4.4e-07   0.00081   19.2   1.0    10    49    31    67    30    81 0.84 Probable metal-binding protein (DUF2387)
zf-ribbon_3          PF13248.1     26 sp|C0SP93|ACCD_BACSU -            290     0.082   12.1   0.2   1   1   8.8e-05      0.16   11.1   0.2     3    22    30    54    28    54 0.80 zinc-ribbon domain
DZR                  PF12773.2     50 sp|C0SP93|ACCD_BACSU -            290      0.13   12.0   0.7   1   1   0.00014      0.26   11.1   0.7    13    38    30    57    18    65 0.57 Double zinc ribbon
PRP21_like_P         PF12230.3    229 sp|C0SP93|ACCD_BACSU -            290      0.18   11.2   1.4   1   1   0.00015      0.28   10.6   1.4   148   191     8    52     5    74 0.84 Pre-mRNA splicing factor PRP21 like protein
zinc-ribbons_6       PF07191.7     70 sp|C0SP93|ACCD_BACSU -            290      0.19   11.5   1.5   1   1   0.00017      0.31   10.8   1.5     3    31    31    62    29    66 0.83 zinc-ribbons
Acyl-CoA_dh_1        PF00441.19   150 sp|P45867|ACDA_BACSU -            379     7e-53  178.7   4.4   1   1   3.4e-56     1e-52  178.2   4.4     1   148   229   376   229   378 0.99 Acyl-CoA dehydrogenase, C-terminal domain
Acyl-CoA_dh_N        PF02771.11   113 sp|P45867|ACDA_BACSU -            379   1.8e-38  131.5   0.1   1   1   1.6e-41   4.6e-38  130.2   0.1     1   113     6   118     6   118 0.98 Acyl-CoA dehydrogenase, N-terminal domain
Acyl-CoA_dh_2        PF08028.6    134 sp|P45867|ACDA_BACSU -            379   4.7e-26   91.6   1.4   1   1     2e-29     6e-26   91.2   0.6     2   133   245   366   244   367 0.97 Acyl-CoA dehydrogenase, C-terminal domain
Acyl-CoA_dh_M        PF02770.14    52 sp|P45867|ACDA_BACSU -            379   1.9e-21   75.3   0.3   1   1   6.3e-25   1.9e-21   75.3   0.3     1    52   122   173   122   173 0.99 Acyl-CoA dehydrogenase, middle domain
Amidohydro_3         PF07969.6    404 sp|P45867|ACDA_BACSU -            379   4.3e-05   22.9   0.0   1   1   2.6e-08   7.7e-05   22.0   0.0   104   211    10   121     5   142 0.89 Amidohydrolase family
Acyl-CoA_dh_1        PF00441.19   150 sp|P45857|ACDB_BACSU -            379   1.7e-56  190.4   3.9   1   1   7.2e-60   2.7e-56  189.8   3.9     1   149   227   375   227   376 0.99 Acyl-CoA dehydrogenase, C-terminal domain
Acyl-CoA_dh_N        PF02771.11   113 sp|P45857|ACDB_BACSU -            379   1.1e-36  125.8   0.4   1   1   8.3e-40   3.1e-36  124.3   0.0     1   113     4   116     4   116 0.95 Acyl-CoA dehydrogenase, N-terminal domain
Acyl-CoA_dh_2        PF08028.6    134 sp|P45857|ACDB_BACSU -            379   9.5e-28   97.1   4.6   1   1   3.9e-31   1.4e-27   96.5   4.6     1   133   242   364   242   365 0.98 Acyl-CoA dehydrogenase, C-terminal domain
Acyl-CoA_dh_M        PF02770.14    52 sp|P45857|ACDB_BACSU -            379   1.3e-18   66.2   1.1   1   1   4.8e-22   1.8e-18   65.7   0.1     1    51   120   170   120   171 0.97 Acyl-CoA dehydrogenase, middle domain
Acyl-CoA_dh_1        PF00441.19   150 sp|O34421|ACDC_BACSU -            380   4.9e-55  185.7   3.9   1   1   2.4e-58   7.2e-55  185.2   3.9     2   150   231   379   230   379 0.99 Acyl-CoA dehydrogenase, C-terminal domain
Acyl-CoA_dh_N        PF02771.11   113 sp|O34421|ACDC_BACSU -            380   3.4e-36  124.2   0.1   1   1   3.1e-39   9.3e-36  122.8   0.1     1   112     6   117     6   118 0.98 Acyl-CoA dehydrogenase, N-terminal domain
Acyl-CoA_dh_2        PF08028.6    134 sp|O34421|ACDC_BACSU -            380   2.7e-26   92.4   1.7   1   1   1.8e-29   5.4e-26   91.4   1.7     2   126   246   360   245   367 0.96 Acyl-CoA dehydrogenase, C-terminal domain
Acyl-CoA_dh_M        PF02770.14    52 sp|O34421|ACDC_BACSU -            380   5.2e-19   67.5   0.6   1   1   3.7e-22   1.1e-18   66.4   0.6     1    52   122   173   122   173 0.98 Acyl-CoA dehydrogenase, middle domain
HpaB_N               PF11794.3    264 sp|O34421|ACDC_BACSU -            380   0.00029   20.3   0.0   1   1   1.6e-07   0.00048   19.6   0.0   174   223   149   198   143   224 0.88 4-hydroxyphenylacetate 3-hydroxylase N terminal
Acetate_kinase       PF00871.12   388 sp|P37877|ACKA_BACSU -            395  5.6e-180  597.9   0.1   1   1  4.3e-184  6.3e-180  597.7   0.1     1   388     3   388     3   388 0.99 Acetokinase family
2-oxoacid_dh         PF00198.18   231 sp|O31550|ACOC_BACSU -            398   2.2e-80  269.2   1.2   2   2   4.4e-83     6e-80  267.8   0.2     2   230   169   397   168   398 0.98 2-oxoacid dehydrogenases acyltransferase (catalytic domain)
Biotin_lipoyl        PF00364.17    74 sp|O31550|ACOC_BACSU -            398     4e-18   64.8   5.4   1   1   7.4e-21     1e-17   63.5   5.4     2    74     4    76     3    76 0.97 Biotin-requiring enzyme
E3_binding           PF02817.12    39 sp|O31550|ACOC_BACSU -            398   9.6e-17   60.3   0.9   1   1   1.4e-19   1.9e-16   59.3   0.9     1    38   115   152   115   153 0.96 e3 binding domain
HlyD_3               PF13437.1    105 sp|O31550|ACOC_BACSU -            398   1.2e-05   25.5   0.7   1   2   0.00015       0.2   12.0   0.1     4    39    13    49    12    50 0.85 HlyD family secretion protein
HlyD_3               PF13437.1    105 sp|O31550|ACOC_BACSU -            398   1.2e-05   25.5   0.7   2   2   6.6e-05     0.088   13.1   0.1     2    44    48    91    47   133 0.68 HlyD family secretion protein
Biotin_lipoyl_2      PF13533.1     50 sp|O31550|ACOC_BACSU -            398   6.4e-05   22.5   0.1   1   2     2e-05     0.027   14.1   0.0    11    40    17    46    13    52 0.89 Biotin-lipoyl like
PYNP_C               PF07831.8     75 sp|O31550|ACOC_BACSU -            398    0.0021   17.4   0.1   1   2   7.8e-05       0.1   12.0   0.1    37    59    23    45    21    55 0.85 Pyrimidine nucleoside phosphorylase C-terminal domain
RnfC_N               PF13375.1    101 sp|O31550|ACOC_BACSU -            398     0.003   17.2   0.1   1   1   1.1e-05     0.015   14.9   0.1    34    83    14    62     3    81 0.83 RnfC Barrel sandwich hybrid domain
GCV_H                PF01597.14   122 sp|O31550|ACOC_BACSU -            398    0.0034   17.0   1.1   1   1   5.8e-06    0.0078   15.8   1.1    34    75    19    60     3    68 0.86 Glycine cleavage H-protein
HlyD_2               PF12700.2    328 sp|O31550|ACOC_BACSU -            398    0.0081   15.3   5.3   2   2   5.3e-05     0.071   12.2   2.0    21   125    45   165    42   215 0.63 HlyD family secretion protein
DUF2118              PF09891.4    150 sp|O31550|ACOC_BACSU -            398     0.076   12.7   0.0   1   1   0.00015       0.2   11.3   0.0    96   135    24    62    11    78 0.83 Uncharacterized protein conserved in archaea (DUF2118)
Aconitase            PF00330.15   465 sp|P09339|ACON_BACSU -            909  1.1e-143  479.1   0.0   1   1  2.9e-147  1.4e-143  478.7   0.0     6   465    69   577    64   577 0.94 Aconitase family (aconitate hydratase)
Aconitase_C          PF00694.14   131 sp|P09339|ACON_BACSU -            909   3.3e-44  150.1   0.0   1   1   1.4e-47   6.7e-44  149.1   0.0     2   130   706   834   705   835 0.99 Aconitase C-terminal domain
IGR                  PF09597.5     57 sp|P09339|ACON_BACSU -            909     0.043   13.7   0.0   1   1   3.2e-05      0.16   11.9   0.0     5    49    53    96    49    99 0.86 IGR protein motif
ACPS                 PF01648.15   115 sp|P96618|ACPS_BACSU -            121   3.5e-22   78.3   0.1   1   1   2.7e-26     4e-22   78.1   0.1     1   114     4   113     4   114 0.95 4'-phosphopantetheinyl transferase superfamily
AMP-binding          PF00501.23   417 sp|P39062|ACSA_BACSU -            572   1.6e-97  326.5   0.0   1   1  2.5e-101   1.8e-97  326.3   0.0     2   416    50   462    49   463 0.85 AMP-binding enzyme
AMP-binding_C        PF13193.1     73 sp|P39062|ACSA_BACSU -            572   1.4e-19   70.8   0.2   1   1   4.4e-23   3.3e-19   69.6   0.2     1    73   471   549   471   549 0.95 AMP-binding enzyme C-terminal domain
Acetyltransf_1       PF00583.19    83 sp|P39065|ACUA_BACSU -            210   0.00011   22.2   0.0   1   1   6.2e-08   0.00018   21.4   0.0     2    48    67   118    66   129 0.89 Acetyltransferase (GNAT) family
Acetyltransf_7       PF13508.1     79 sp|P39065|ACUA_BACSU -            210   0.00037   20.5   0.1   1   1   4.5e-07    0.0013   18.7   0.1     3    63    61   133    59   208 0.81 Acetyltransferase (GNAT) domain
Acetyltransf_10      PF13673.1    117 sp|P39065|ACUA_BACSU -            210    0.0055   16.8   0.0   1   1   4.1e-06     0.012   15.7   0.0    37    91    54   123    35   147 0.75 Acetyltransferase (GNAT) domain
Acetyltransf_9       PF13527.1    127 sp|P39065|ACUA_BACSU -            210     0.068   13.0   0.0   1   2   7.8e-05      0.23   11.3   0.0    20    98    41   121    28   136 0.71 Acetyltransferase (GNAT) domain
PPP5                 PF08321.7     95 sp|P39065|ACUA_BACSU -            210      0.13   12.3   0.0   1   1   8.4e-05      0.25   11.3   0.0    27    64    92   129    86   134 0.91 PPP5 TPR repeat region
Hist_deacetyl        PF00850.14   311 sp|P39067|ACUC_BACSU -            387   3.2e-74  250.0   0.1   1   1   2.7e-78     4e-74  249.6   0.1     4   306    12   315     9   319 0.90 Histone deacetylase domain
Acylphosphatase      PF00708.13    91 sp|O35031|ACYP_BACSU -             91   5.4e-30  103.3   0.1   1   1   1.2e-33   5.9e-30  103.2   0.1     1    90     1    88     1    89 0.97 Acylphosphatase
LuxE                 PF04443.7    366 sp|O35031|ACYP_BACSU -             91     0.051   12.2   0.0   1   1   1.1e-05     0.053   12.1   0.0   272   332    19    78     7    90 0.79 Acyl-protein synthetase, LuxE
Cas_Csa4             PF09703.5    362 sp|O35031|ACYP_BACSU -             91     0.052   12.5   0.0   1   1   1.1e-05     0.055   12.4   0.0    31    56     8    33     3    84 0.70 CRISPR-associated protein (Cas_Csa4)
DNA_binding_1        PF01035.15    85 sp|P19220|ADAB_BACSU -            179   8.1e-28   95.9   0.0   1   1   1.5e-31   1.1e-27   95.5   0.0     1    82    89   170    89   173 0.97 6-O-methylguanine DNA methyltransferase, DNA binding domain
Methyltransf_1N      PF02870.10    77 sp|P19220|ADAB_BACSU -            179   4.3e-19   68.8   0.0   1   1   7.9e-23   5.8e-19   68.4   0.0     1    77     7    86     7    86 0.98 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain
UvrD-helicase        PF00580.16   315 sp|P23478|ADDA_BACSU -           1232    3e-113  378.2   3.8   1   3  3.1e-115  5.7e-112  374.0   0.2     1   314    11   461    11   462 0.99 UvrD/REP helicase N-terminal domain
UvrD_C               PF13361.1    351 sp|P23478|ADDA_BACSU -           1232   3.7e-91  306.1   0.6   2   2   5.5e-94     1e-90  304.7   0.1     1   350   472   884   472   885 0.96 UvrD-like helicase C-terminal domain
PDDEXK_1             PF12705.2    257 sp|P23478|ADDA_BACSU -           1232   6.9e-11   42.0   2.8   1   1   4.4e-14   8.1e-11   41.7   0.2    32   194  1053  1225  1043  1230 0.78 PD-(D/E)XK nuclease superfamily
UvrD_C_2             PF13538.1    104 sp|P23478|ADDA_BACSU -           1232   1.1e-09   38.3   0.1   1   2   2.1e-07   0.00039   20.5   0.0    33    87   766   818   734   824 0.64 UvrD-like helicase C-terminal domain
UvrD_C_2             PF13538.1    104 sp|P23478|ADDA_BACSU -           1232   1.1e-09   38.3   0.1   2   2   1.5e-05     0.028   14.5   0.1    85   104   862   881   848   881 0.81 UvrD-like helicase C-terminal domain
AAA_19               PF13245.1     76 sp|P23478|ADDA_BACSU -           1232   3.8e-07   29.7   0.1   1   1   7.6e-10   1.4e-06   27.9   0.1     8    74    21   111    16   113 0.75 Part of AAA domain
DEAD                 PF00270.24   169 sp|P23478|ADDA_BACSU -           1232   2.5e-05   23.8   0.0   1   1   3.4e-08   6.2e-05   22.5   0.0     3    80    14    90    12   118 0.77 DEAD/DEAH box helicase
AAA_12               PF13087.1    200 sp|P23478|ADDA_BACSU -           1232   3.5e-05   23.2   0.1   2   2   6.2e-06     0.011   15.0   0.0   144   200   788   885   763   885 0.61 AAA domain
PDDEXK_1             PF12705.2    257 sp|P23477|ADDB_BACSU -           1166     3e-52  177.5   1.3   3   3   6.6e-55   2.4e-51  174.5   0.0     2   257   790  1131   789  1131 0.94 PD-(D/E)XK nuclease superfamily
UvrD_C               PF13361.1    351 sp|P23477|ADDB_BACSU -           1166   5.5e-09   35.9   2.6   1   2   2.4e-12   8.8e-09   35.2   0.6    43   223   307   511   288   566 0.71 UvrD-like helicase C-terminal domain
AAA_19               PF13245.1     76 sp|P23477|ADDB_BACSU -           1166      0.15   11.8   0.0   1   1   0.00013      0.48   10.2   0.0    16    49     7    39     4    44 0.88 Part of AAA domain
Adenine_deam_C       PF13382.1    171 sp|P39761|ADEC_BACSU -            577   4.7e-63  211.3   0.0   1   1   3.5e-66   8.6e-63  210.5   0.0     1   170   403   572   403   573 0.98 Adenine deaminase C-terminal domain
Amidohydro_1         PF01979.15   333 sp|P39761|ADEC_BACSU -            577   1.9e-41  142.8   0.4   1   1   3.5e-44   8.7e-41  140.6   0.4     1   332    66   331    66   332 0.96 Amidohydrolase family
Amidohydro_4         PF13147.1    304 sp|P39761|ADEC_BACSU -            577   7.4e-17   62.2   1.1   1   1   3.7e-19   9.1e-16   58.6   1.1     1   304    61   329    61   329 0.78 Amidohydrolase
Amidohydro_5         PF13594.1     68 sp|P39761|ADEC_BACSU -            577   1.3e-14   53.7   6.1   2   2   1.7e-17   4.3e-14   52.0   2.7     1    68    41   100    41   100 0.87 Amidohydrolase
Urease_alpha         PF00449.15   121 sp|P39761|ADEC_BACSU -            577    0.0091   16.1   0.6   1   1   9.2e-06     0.023   14.8   0.6    60   107    13    62     4    72 0.79 Urease alpha-subunit, N-terminal domain
HTH_30               PF13556.1     59 sp|P71073|ADER_BACSU -            422   1.6e-16   59.6   0.1   1   1   8.7e-20   4.3e-16   58.2   0.1     2    58   360   416   359   417 0.96 PucR C-terminal helix-turn-helix domain
CodY                 PF06018.9    177 sp|P71073|ADER_BACSU -            422   9.9e-09   34.7   1.4   1   3   4.2e-12   2.1e-08   33.6   0.0    24   168    29   170    22   176 0.91 CodY GAF-like domain
HTH_8                PF02954.14    42 sp|P71073|ADER_BACSU -            422     0.014   14.9   0.0   1   1   5.8e-06     0.029   13.9   0.0    20    41   372   393   361   394 0.88 Bacterial regulatory protein, Fis family
ADH_N                PF08240.7    109 sp|C0SPA5|ADHA_BACSU -            349   1.9e-27   95.1   2.9   1   1   2.9e-30   3.6e-27   94.2   2.9     1   108    31   146    31   147 0.93 Alcohol dehydrogenase GroES-like domain
ADH_zinc_N           PF00107.21   130 sp|C0SPA5|ADHA_BACSU -            349   3.6e-27   94.4   0.1   1   1   5.1e-30   6.3e-27   93.6   0.1     1   129   188   310   188   311 0.98 Zinc-binding dehydrogenase
2-Hacid_dh_C         PF02826.14   178 sp|C0SPA5|ADHA_BACSU -            349   1.6e-05   24.1   0.0   1   1   2.3e-08   2.9e-05   23.2   0.0    36    80   178   222   170   259 0.75 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain
Shikimate_DH         PF01488.15   135 sp|C0SPA5|ADHA_BACSU -            349     5e-05   23.4   0.0   1   1   9.1e-08   0.00011   22.2   0.0    12    88   178   253   170   283 0.86 Shikimate / quinate 5-dehydrogenase
AlaDh_PNT_C          PF01262.16   168 sp|C0SPA5|ADHA_BACSU -            349    0.0001   21.9   0.0   1   1   1.8e-07   0.00022   20.8   0.0    18    67   175   225   166   246 0.89 Alanine dehydrogenase/PNT, C-terminal domain
NAD_binding_2        PF03446.10   163 sp|C0SPA5|ADHA_BACSU -            349   0.00094   19.0   0.1   1   1   1.6e-06     0.002   17.9   0.1     2    77   179   260   178   277 0.86 NAD binding domain of 6-phosphogluconate dehydrogenase
NAD_binding_10       PF13460.1    183 sp|C0SPA5|ADHA_BACSU -            349    0.0048   16.9   0.1   1   1   6.8e-06    0.0084   16.1   0.1     1    72   181   252   181   323 0.85 NADH(P)-binding
NAD_binding_7        PF13241.1    103 sp|C0SPA5|ADHA_BACSU -            349     0.009   16.2   0.0   1   1   1.4e-05     0.017   15.3   0.0     7    58   178   237   176   270 0.75 Putative NAD(P)-binding
ELFV_dehydrog        PF00208.16   244 sp|C0SPA5|ADHA_BACSU -            349     0.021   14.4   0.0   1   1   2.7e-05     0.033   13.7   0.0    32    63   178   209   166   226 0.90 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase
ApbA                 PF02558.11   151 sp|C0SPA5|ADHA_BACSU -            349      0.04   13.3   0.0   1   1   5.4e-05     0.067   12.6   0.0     1    77   181   250   181   263 0.72 Ketopantoate reductase PanE/ApbA
3HCDH_N              PF02737.13   180 sp|C0SPA5|ADHA_BACSU -            349     0.063   12.9   0.1   1   1   5.1e-05     0.063   12.9   0.1     1    56   180   235   180   262 0.72 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain
ADH_N                PF08240.7    109 sp|O06012|ADHB_BACSU -            378     7e-29   99.7   1.6   1   1   3.8e-32   9.3e-29   99.3   0.3     2   104    26   139    25   145 0.91 Alcohol dehydrogenase GroES-like domain
ADH_N_assoc          PF13823.1     23 sp|O06012|ADHB_BACSU -            378     1e-12   47.4   2.3   1   1   8.2e-16     2e-12   46.4   2.3     1    23     1    23     1    23 0.99 Alcohol dehydrogenase GroES-associated
ADH_zinc_N           PF00107.21   130 sp|O06012|ADHB_BACSU -            378   3.1e-11   42.9   0.5   1   2   5.9e-12   1.5e-08   34.2   0.1     1    77   189   265   189   280 0.86 Zinc-binding dehydrogenase
Methyltransf_18      PF12847.2    112 sp|O06012|ADHB_BACSU -            378     0.016   15.7   0.0   1   1   1.2e-05     0.029   14.9   0.0     1    80   178   266   178   299 0.57 Methyltransferase domain
Methyltransf_25      PF13649.1    101 sp|O06012|ADHB_BACSU -            378       0.1   12.9   0.0   1   1   7.6e-05      0.19   12.1   0.0     4    45   185   224   182   266 0.81 Methyltransferase domain
RNA12                PF10443.4    431 sp|O06012|ADHB_BACSU -            378      0.19   10.1   0.0   1   1   0.00011      0.28    9.6   0.0   215   287   202   276   195   291 0.77 RNA12 protein
NUDIX                PF00293.23   135 sp|P54570|ADPP_BACSU -            185   1.2e-21   76.7   0.8   1   1   1.4e-25     2e-21   76.0   0.8     3   127    44   165    42   174 0.92 NUDIX domain
MR_MLE_C             PF13378.1    111 sp|O34508|AEEP_BACSU -            366   1.8e-23   82.5   0.0   1   1   1.1e-26   4.1e-23   81.4   0.0     1   110   244   354   244   355 0.88 Enolase C-terminal domain-like
MR_MLE_N             PF02746.11   117 sp|O34508|AEEP_BACSU -            366   9.7e-22   77.1   0.3   1   2   1.2e-24   4.6e-21   74.9   0.1     3   117     7   124     4   124 0.90 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain
MR_MLE               PF01188.16    67 sp|O34508|AEEP_BACSU -            366   1.1e-17   64.2   0.1   1   1   6.2e-21   2.3e-17   63.2   0.1     1    67   174   244   174   244 0.94 Mandelate racemase / muconate lactonizing enzyme, C-terminal domain
MAAL_C               PF07476.6    249 sp|O34508|AEEP_BACSU -            366    0.0033   16.4   0.1   1   1   1.8e-06    0.0065   15.4   0.1   136   215   235   313   204   320 0.84 Methylaspartate ammonia-lyase C-terminus
Glyco_hydro_4C       PF11975.3    232 sp|O34645|AGAL_BACSU -            432   5.5e-78  261.9   1.1   1   1     2e-81   7.4e-78  261.5   1.1     1   232   188   404   188   404 0.97 Family 4 glycosyl hydrolase C-terminal domain
Glyco_hydro_4        PF02056.11   183 sp|O34645|AGAL_BACSU -            432   1.1e-76  256.1   0.0   1   1   4.8e-80   1.8e-76  255.5   0.0     1   183     3   185     3   185 0.98 Family 4 glycosyl hydrolase
HemX                 PF04375.9    372 sp|O34645|AGAL_BACSU -            432     0.063   11.8   0.1   1   1   2.7e-05     0.099   11.2   0.1   267   300   365   399   362   406 0.89 HemX
AhpC-TSA             PF00578.16   124 sp|P80239|AHPC_BACSU -            187   1.3e-33  115.3   0.0   1   1   4.3e-37   1.6e-33  115.0   0.0     1   122     4   132     4   134 0.96 AhpC/TSA family
Redoxin              PF08534.5    146 sp|P80239|AHPC_BACSU -            187   5.5e-12   45.4   0.0   1   1   1.8e-15   6.5e-12   45.2   0.0    15   136    18   140     4   152 0.85 Redoxin
1-cysPrx_C           PF10417.4     40 sp|P80239|AHPC_BACSU -            187   6.1e-05   22.5   0.1   1   1   3.2e-08   0.00012   21.6   0.1     1    31   154   182   154   186 0.89 C-terminal domain of 1-Cys peroxiredoxin
SCO1-SenC            PF02630.9    174 sp|P80239|AHPC_BACSU -            187    0.0076   15.8   0.0   1   1   3.9e-06     0.015   14.9   0.0    33    93     9    72     3    93 0.80 SCO1/SenC
AA_kinase            PF00696.23   242 sp|Q04795|AK1_BACSU  -            404   2.4e-44  151.6   3.2   1   2   1.2e-47   4.4e-44  150.8   1.9     1   242     2   235     2   235 0.91 Amino acid kinase family
ACT_7                PF13840.1     65 sp|Q04795|AK1_BACSU  -            404     2e-22   78.4   0.9   2   2   3.8e-23   1.4e-19   69.3   0.2     4    65   337   398   335   398 0.97 ACT domain
ACT                  PF01842.20    66 sp|Q04795|AK1_BACSU  -            404   0.00018   20.8   1.1   2   3   7.8e-05      0.29   10.6   0.1    16    46   288   313   287   326 0.78 ACT domain
AA_kinase            PF00696.23   242 sp|P08495|AK2_BACSU  -            408   2.6e-51  174.5   1.6   1   1   8.7e-55   2.6e-51  174.5   1.6     2   241     3   229     2   230 0.92 Amino acid kinase family
ACT                  PF01842.20    66 sp|P08495|AK2_BACSU  -            408   1.3e-17   62.9   2.8   1   2   1.8e-11   5.3e-08   32.1   0.1    13    64   275   326   267   328 0.95 ACT domain
ACT                  PF01842.20    66 sp|P08495|AK2_BACSU  -            408   1.3e-17   62.9   2.8   2   2   7.2e-11   2.1e-07   30.2   0.1     2    65   343   399   342   400 0.93 ACT domain
ACT_7                PF13840.1     65 sp|P08495|AK2_BACSU  -            408   3.1e-15   55.4   6.7   2   2   7.7e-18   2.3e-14   52.6   1.0     1    65   333   397   333   397 0.97 ACT domain
PfkB                 PF00294.19   301 sp|P08495|AK2_BACSU  -            408    0.0016   17.6   0.1   1   1   1.4e-06    0.0041   16.2   0.1    66   150   277   362   259   378 0.85 pfkB family carbohydrate kinase
SRP14                PF02290.10    93 sp|P08495|AK2_BACSU  -            408    0.0081   16.0   0.2   2   2     5e-05      0.15   12.0   0.0    51    80   364   393   350   401 0.87 Signal recognition particle 14kD protein
AA_kinase            PF00696.23   242 sp|P94417|AK3_BACSU  -            454   4.9e-40  137.5   0.0   1   1   2.3e-43   8.7e-40  136.7   0.0     3   242     2   276     1   276 0.86 Amino acid kinase family
ACT_7                PF13840.1     65 sp|P94417|AK3_BACSU  -            454   2.8e-07   29.9   0.1   1   1   1.7e-10   6.2e-07   28.8   0.1     3    64   381   444   379   445 0.94 ACT domain
ACT                  PF01842.20    66 sp|P94417|AK3_BACSU  -            454   3.4e-06   26.4   0.0   1   1   3.3e-09   1.2e-05   24.6   0.0    11    61   398   443   394   448 0.81 ACT domain
DUF724               PF05266.9    190 sp|P94417|AK3_BACSU  -            454     0.053   13.1   0.1   2   2   5.2e-05      0.19   11.3   0.1    75   188   325   435   318   437 0.77 Protein of unknown function (DUF724)
ABC_tran             PF00005.22   137 sp|P71009|ALBC_BACSU -            239   2.7e-21   76.3   0.0   1   1   3.1e-24   3.5e-21   75.9   0.0     1   136    20   166    20   167 0.92 ABC transporter
AAA_21               PF13304.1    303 sp|P71009|ALBC_BACSU -            239   1.5e-09   38.2   4.9   1   1   4.4e-09     5e-06   26.6   4.9     4   297    35   196    32   202 0.65 AAA domain
MMR_HSR1             PF01926.18   116 sp|P71009|ALBC_BACSU -            239    0.0051   16.7   0.0   1   1   7.1e-06    0.0081   16.1   0.0     3    39    34    81    32   150 0.69 50S ribosome-binding GTPase
DUF258               PF03193.11   161 sp|P71009|ALBC_BACSU -            239    0.0056   15.8   0.0   1   1   7.8e-06    0.0089   15.2   0.0    23    59    17    54     6   104 0.84 Protein of unknown function, DUF258
cobW                 PF02492.14   178 sp|P71009|ALBC_BACSU -            239     0.023   14.1   0.2   1   1     3e-05     0.034   13.5   0.2     2    22    32    52    31    72 0.85 CobW/HypB/UreG, nucleotide-binding domain
AAA_29               PF13555.1     62 sp|P71009|ALBC_BACSU -            239     0.025   14.0   0.0   1   1   4.6e-05     0.053   13.0   0.0    21    43    28    50    11    54 0.79 P-loop containing region of AAA domain
FeoB_N               PF02421.13   156 sp|P71009|ALBC_BACSU -            239     0.027   13.7   0.1   1   1   4.8e-05     0.055   12.7   0.1     5    41    35    72    31    85 0.74 Ferrous iron transport protein B
ArgK                 PF03308.11   267 sp|P71009|ALBC_BACSU -            239     0.063   12.0   0.0   1   1   7.9e-05      0.09   11.5   0.0    16    52    17    53     7    70 0.84 ArgK protein
AAA_13               PF13166.1    712 sp|P71009|ALBC_BACSU -            239     0.078   11.4   0.0   1   1   8.6e-05     0.099   11.0   0.0    23    60    37    73    30   139 0.75 AAA domain
AAA_23               PF13476.1    202 sp|P71009|ALBC_BACSU -            239     0.081   13.2   0.5   1   1   0.00014      0.16   12.3   0.2    13    40    23    51    17    63 0.79 AAA domain
DLIC                 PF05783.6    472 sp|P71009|ALBC_BACSU -            239      0.13   10.8   0.0   1   1   0.00017      0.19   10.3   0.0    22    55    27    60    16    67 0.88 Dynein light intermediate chain (DLIC)
SRP54                PF00448.17   196 sp|P71009|ALBC_BACSU -            239      0.15   11.5   0.2   1   1    0.0002      0.23   10.8   0.2     3    23    32    52    30    84 0.84 SRP54-type protein, GTPase domain
Peptidase_M16        PF00675.15   149 sp|P71006|ALBF_BACSU -            426   7.4e-13   48.5   0.0   1   2   7.3e-16   3.6e-12   46.2   0.0    31   128    62   155    38   165 0.91 Insulinase (Peptidase family M16)
Peptidase_M16_C      PF05193.16   184 sp|P71006|ALBF_BACSU -            426    0.0033   17.1   0.0   1   1   3.5e-06     0.018   14.7   0.0     2   151   182   329   181   346 0.66 Peptidase M16 inactive domain
DUF4467              PF14729.1     94 sp|P71006|ALBF_BACSU -            426     0.013   15.8   0.1   1   1   6.3e-06     0.031   14.5   0.1    24    71   298   345   292   355 0.84 Domain of unknown function with cystatin-like fold (DUF4467)
AAL_decarboxy        PF03306.8    221 sp|Q04777|ALDC_BACSU -            255   3.3e-89  297.6   0.0   1   1   2.6e-93   3.8e-89  297.5   0.0     1   219    22   240    22   242 0.99 Alpha-acetolactate decarboxylase
Aldedh               PF00171.17   462 sp|P42236|ALDH1_BACSU -            488  5.4e-172  572.2   4.8   1   1  8.3e-176  6.1e-172  572.1   4.8     1   462    18   484    18   484 0.98 Aldehyde dehydrogenase family
LuxC                 PF05893.9    400 sp|P42236|ALDH1_BACSU -            488    0.0022   16.7   0.0   1   1   5.6e-07    0.0041   15.8   0.0    78   258   136   312   126   350 0.84 Acyl-CoA reductase (LuxC)
Aldedh               PF00171.17   462 sp|P39616|ALDH2_BACSU -            456   3.7e-96  322.2   0.0   1   1  9.1e-100   4.5e-96  321.9   0.0    35   462     8   428     2   428 0.94 Aldehyde dehydrogenase family
NUMOD3               PF07460.6     37 sp|P39616|ALDH2_BACSU -            456     0.037   13.9   0.0   1   1   1.5e-05     0.075   12.9   0.0     4    31   259   290   257   296 0.85 NUMOD3 motif (2 copies)
LuxC                 PF05893.9    400 sp|P39616|ALDH2_BACSU -            456     0.082   11.6   0.0   1   1   2.4e-05      0.12   11.0   0.0    88   259   104   264    96   306 0.78 Acyl-CoA reductase (LuxC)
Aldedh               PF00171.17   462 sp|P46329|ALDH3_BACSU -            445   8.2e-99  331.0   0.1   1   1  3.1e-102   9.2e-99  330.8   0.1    26   460     4   437     1   439 0.95 Aldehyde dehydrogenase family
LuxC                 PF05893.9    400 sp|P46329|ALDH3_BACSU -            445   3.8e-07   29.1   2.1   2   2   8.2e-10   2.4e-06   26.5   0.0    78   363    98   387    73   402 0.74 Acyl-CoA reductase (LuxC)
RelB_N               PF12910.2     46 sp|P46329|ALDH3_BACSU -            445     0.025   13.9   0.1   1   1   3.7e-05      0.11   11.8   0.1    10    31    32    55    25    60 0.86 Antitoxin of toxin-antitoxin stability system N-terminal
HXXSHH               PF07586.6    302 sp|P46329|ALDH3_BACSU -            445      0.14   11.0   2.6   1   1   7.4e-05      0.22   10.4   2.6   161   224    10    72     2    88 0.73 Protein of unknown function (DUF1552)
Aldedh               PF00171.17   462 sp|O34660|ALDH4_BACSU -            495  3.4e-193  642.1   0.1   1   1    1e-196  3.8e-193  642.0   0.1     2   462    29   489    28   489 0.99 Aldehyde dehydrogenase family
LuxC                 PF05893.9    400 sp|O34660|ALDH4_BACSU -            495   5.6e-05   22.0   0.0   1   1   2.4e-08   8.8e-05   21.3   0.0    82   285   151   349   144   370 0.75 Acyl-CoA reductase (LuxC)
YCII                 PF03795.9     95 sp|O34660|ALDH4_BACSU -            495     0.024   14.8   0.0   1   2   3.8e-05      0.14   12.3   0.0    15    77     6    68     2    70 0.89 YCII-related domain
PYNP_C               PF07831.8     75 sp|O34660|ALDH4_BACSU -            495     0.031   13.7   0.7   1   1   3.7e-05      0.14   11.6   0.0    46    72    44    70    43    72 0.93 Pyrimidine nucleoside phosphorylase C-terminal domain
Aldedh               PF00171.17   462 sp|O06478|ALDH5_BACSU -            485  1.2e-157  525.0   0.0   1   1  8.9e-162  1.3e-157  524.8   0.0     1   462    16   474    16   474 0.98 Aldehyde dehydrogenase family
Aldedh               PF00171.17   462 sp|P94358|ALDY_BACSU -            485  4.4e-152  506.6   0.3   1   1  6.7e-156    5e-152  506.4   0.3     1   462    15   474    15   474 0.99 Aldehyde dehydrogenase family
Gly_rich_SFCGS       PF14272.1    115 sp|P94358|ALDY_BACSU -            485     0.049   13.5   0.0   2   2     4e-05       0.3   10.9   0.1     9    60   184   236   179   245 0.90 Glycine-rich SFCGS
F_bP_aldolase        PF01116.15   287 sp|P13243|ALF_BACSU  -            285  3.6e-108  361.0   0.4   1   1  5.5e-112    4e-108  360.8   0.4     2   287     3   285     2   285 0.98 Fructose-bisphosphate aldolase class-II
Aldolase             PF01081.14   196 sp|P50846|ALKH_BACSU -            196   7.4e-83  276.5   0.1   1   1   2.8e-86   8.3e-83  276.3   0.1     1   196     6   196     6   196 0.99 KDPG and KHG aldolase
PrpR_N               PF06506.6    176 sp|P50846|ALKH_BACSU -            196    0.0016   17.8   0.2   1   2   5.3e-05      0.16   11.3   0.3    75   143    11    78     4    80 0.75 Propionate catabolism activator
NMO                  PF03060.10   330 sp|P50846|ALKH_BACSU -            196     0.011   14.9   0.8   1   1   1.8e-05     0.054   12.6   0.8    97   167    22    95     1   195 0.64 Nitronate monooxygenase
Amidohydro_4         PF13147.1    304 sp|O32137|ALLB_BACSU -            446   9.6e-28   97.9   0.4   1   1   4.9e-31   1.5e-27   97.3   0.4     2   304    47   386    47   386 0.86 Amidohydrolase
Amidohydro_1         PF01979.15   333 sp|O32137|ALLB_BACSU -            446   4.4e-22   79.1   0.0   1   1     2e-25     6e-22   78.7   0.0     1   333    51   389    51   389 0.81 Amidohydrolase family
Amidohydro_5         PF13594.1     68 sp|O32137|ALLB_BACSU -            446   5.3e-16   58.1   0.3   1   1     6e-19   1.8e-15   56.5   0.3     1    67    23    88    23    89 0.88 Amidohydrolase
Amidohydro_3         PF07969.6    404 sp|O32137|ALLB_BACSU -            446   1.5e-07   31.0   0.4   3   3   8.3e-08   0.00025   20.4   0.0   366   404   350   387   289   387 0.88 Amidohydrolase family
Urease_alpha         PF00449.15   121 sp|O32137|ALLB_BACSU -            446     0.018   15.1   1.4   1   1   1.1e-05     0.034   14.2   1.4    65    99     2    36     1    51 0.89 Urease alpha-subunit, N-terminal domain
Peptidase_M20        PF01546.23   189 sp|O32149|ALLC_BACSU -            412   7.2e-27   94.1   0.1   1   1   1.9e-30   9.2e-27   93.7   0.1     2   188    81   408    80   409 0.92 Peptidase family M20/M25/M40
M20_dimer            PF07687.9    112 sp|O32149|ALLC_BACSU -            412    0.0017   18.0   0.0   1   1   6.6e-07    0.0033   17.1   0.0    29   105   241   310   171   316 0.81 Peptidase dimerisation domain
Peptidase_M28        PF04389.12   179 sp|O32149|ALLC_BACSU -            412     0.033   13.9   0.0   1   1   1.1e-05     0.052   13.2   0.0     1    62    77   131    77   194 0.86 Peptidase family M28
Transp_cyt_pur       PF02133.10   440 sp|P94575|ALLP_BACSU -            490  7.8e-158  525.6  36.1   1   1  6.1e-162  9.1e-158  525.4  36.1     1   440    20   456    20   456 0.99 Permease for cytosine/purines, uracil, thiamine, allantoin
Ala_racemase_N       PF01168.15   218 sp|P10725|ALR1_BACSU -            389     3e-60  203.4   0.2   1   1   5.1e-64   3.7e-60  203.1   0.2     1   218    14   230    14   230 0.96 Alanine racemase, N-terminal domain
Ala_racemase_C       PF00842.16   129 sp|P10725|ALR1_BACSU -            389   2.4e-42  143.3   0.0   1   1   5.1e-46   3.8e-42  142.7   0.0     1   128   245   369   245   370 0.96 Alanine racemase, C-terminal domain
Ala_racemase_N       PF01168.15   218 sp|P94494|ALR2_BACSU -            394   7.2e-58  195.6   0.1   1   1   1.3e-61   9.4e-58  195.3   0.1     1   218    12   235    12   235 0.96 Alanine racemase, N-terminal domain
Ala_racemase_C       PF00842.16   129 sp|P94494|ALR2_BACSU -            394   8.9e-44  148.0   0.7   1   1   1.9e-47   1.4e-43  147.3   0.4     1   129   250   379   250   379 0.96 Alanine racemase, C-terminal domain
Na_Ala_symp          PF01235.12   416 sp|Q45068|ALST_BACSU -            465  1.1e-175  584.1  32.8   1   1  9.5e-180  1.4e-175  583.8  32.8     2   415    44   448    41   449 0.98 Sodium:alanine symporter family
Peptidase_M20        PF01546.23   189 sp|P54983|AMHX_BACSU -            383   1.6e-25   89.7   1.4   1   1   2.8e-29   2.1e-25   89.3   1.4     2   188    69   368    68   369 0.90 Peptidase family M20/M25/M40
M20_dimer            PF07687.9    112 sp|P54983|AMHX_BACSU -            383   4.4e-12   45.7   0.7   1   1   1.3e-15     1e-11   44.5   0.7    12   109   177   267   168   270 0.92 Peptidase dimerisation domain
Peptidase_M17        PF00883.16   311 sp|O32106|AMPA_BACSU -            500  6.9e-127  422.6   4.6   1   1  1.3e-130  9.6e-127  422.1   4.6     2   310   179   486   178   487 0.99 Cytosol aminopeptidase family, catalytic domain
Peptidase_M17_N      PF02789.12   126 sp|O32106|AMPA_BACSU -            500   4.2e-26   91.1   0.3   1   2   1.7e-29   1.3e-25   89.6   0.1     1   125    15   142    15   143 0.96 Cytosol aminopeptidase family, N-terminal domain
Peptidase_M29        PF02073.10   398 sp|P39762|AMPS_BACSU -            410    2e-165  550.3   3.2   1   1  1.5e-169  2.3e-165  550.2   3.2     1   398     1   408     1   408 0.99 Thermophilic metalloprotease (M29)
BPD_transp_1         PF00528.17   185 sp|O34518|AMYC_BACSU -            276   1.8e-16   60.2  20.5   2   2   1.2e-20   1.8e-16   60.2  20.5     2   181    84   267    64   271 0.87 Binding-protein-dependent transport system inner membrane component
BPD_transp_1         PF00528.17   185 sp|O34706|AMYD_BACSU -            303   4.3e-21   75.2  12.6   2   2   5.8e-25   4.3e-21   75.2  12.6     2   173    94   294    93   300 0.80 Binding-protein-dependent transport system inner membrane component
CCSMST1              PF15013.1     77 sp|O34706|AMYD_BACSU -            303    0.0013   18.5   0.4   1   3   1.8e-07    0.0013   18.5   0.4    12    46     5    38     2    42 0.79 CCSMST1 family
Alpha-amylase        PF00128.19   316 sp|P00691|AMY_BACSU  -            659   2.2e-53  181.6   9.5   1   1     5e-57   2.5e-53  181.5   8.4     1   316    56   358    56   358 0.92 Alpha amylase, catalytic domain
hDGE_amylase         PF14701.1    423 sp|P00691|AMY_BACSU  -            659     0.014   14.3   1.3   1   1   4.1e-06      0.02   13.7   1.3     3   109    42   151    40   163 0.72 glucanotransferase domain of human glycogen debranching enzyme
SBP_bac_5            PF00496.17   374 sp|P42061|APPA_BACSU -            543   4.7e-93  312.0  10.1   1   1   3.1e-97   4.7e-93  312.0  10.1     3   365    89   455    87   465 0.94 Bacterial extracellular solute-binding proteins, family 5 Middle
BPD_transp_1         PF00528.17   185 sp|P42062|APPB_BACSU -            316     2e-45  154.5  10.5   2   2   1.4e-49     2e-45  154.5  10.5     2   184   115   315   114   316 0.99 Binding-protein-dependent transport system inner membrane component
BPD_transp_1         PF00528.17   185 sp|P42063|APPC_BACSU -            303   1.9e-30  105.7   8.5   2   2   5.2e-34   1.9e-30  105.7   8.5     1   182   117   300   117   303 0.98 Binding-protein-dependent transport system inner membrane component
OppC_N               PF12911.2     56 sp|P42063|APPC_BACSU -            303   2.1e-16   59.0   0.3   1   2   5.7e-20   2.1e-16   59.0   0.3     1    55    22    76    22    77 0.92 N-terminal TM domain of oligopeptide transport permease C
DUF2062              PF09835.4    154 sp|P42063|APPC_BACSU -            303      0.11   12.0   6.3   2   2   0.00011      0.42   10.2   1.0    72   131   219   284   208   288 0.81 Uncharacterized protein conserved in bacteria (DUF2062)
Phage_H_T_join       PF05521.6     95 sp|P42063|APPC_BACSU -            303      0.14   12.4   0.0   1   1   6.3e-05      0.23   11.7   0.0    21    58   172   210   163   215 0.89 Phage head-tail joining protein
ABC_tran             PF00005.22   137 sp|P42064|APPD_BACSU -            328   3.8e-30  104.9   0.1   1   1   4.6e-33   5.2e-30  104.5   0.1     2   136    25   183    24   184 0.91 ABC transporter
oligo_HPY            PF08352.7     64 sp|P42064|APPD_BACSU -            328   1.5e-21   76.4   0.0   1   1   2.3e-24   2.7e-21   75.6   0.0     1    64   235   299   235   299 0.99 Oligopeptide/dipeptide transporter, C-terminal region
AAA_21               PF13304.1    303 sp|P42064|APPD_BACSU -            328   2.9e-09   37.2   0.5   1   1     8e-11   9.1e-08   32.3   0.5   219   300   129   217    36   220 0.73 AAA domain
SMC_N                PF02463.14   220 sp|P42064|APPD_BACSU -            328   2.5e-05   23.6   0.8   1   1     4e-08   4.5e-05   22.7   0.8    25   212    35   230     5   237 0.73 RecF/RecN/SMC N terminal domain
AAA_10               PF12846.2    304 sp|P42064|APPD_BACSU -            328   3.8e-05   23.2   0.2   1   2   1.8e-05      0.02   14.3   0.2     4    91    37   141    34   171 0.68 AAA-like domain
AAA_15               PF13175.1    415 sp|P42064|APPD_BACSU -            328   6.6e-05   22.1   0.3   2   2   3.1e-07   0.00035   19.7   0.0   368   411   172   215   167   219 0.91 AAA ATPase domain
AAA_25               PF13481.1    194 sp|P42064|APPD_BACSU -            328   0.00061   19.2   0.1   1   2   4.9e-05     0.055   12.8   0.0    19    57    20    58     3    80 0.76 AAA domain
AAA_29               PF13555.1     62 sp|P42064|APPD_BACSU -            328    0.0048   16.3   0.2   1   1   8.1e-06    0.0093   15.4   0.2    13    37    25    48    23    55 0.86 P-loop containing region of AAA domain
ATP-synt_ab          PF00006.20   215 sp|P42064|APPD_BACSU -            328     0.058   12.8   0.1   1   1    0.0001      0.11   11.9   0.1    10    73    29   134    21   153 0.72 ATP synthase alpha/beta family, nucleotide-binding domain
DEAD                 PF00270.24   169 sp|P42064|APPD_BACSU -            328     0.064   12.7   0.7   1   1   0.00013      0.14   11.6   0.7    11   158    31   212    27   216 0.69 DEAD/DEAH box helicase
KaiC                 PF06745.8    227 sp|P42064|APPD_BACSU -            328      0.12   11.4   1.3   1   2   0.00069      0.78    8.8   0.1    16    37    31    52    21    59 0.87 KaiC
ABC_tran             PF00005.22   137 sp|P42065|APPF_BACSU -            329   1.3e-35  122.7   0.0   1   1   1.4e-38   1.8e-35  122.2   0.0     2   136    37   188    36   189 0.94 ABC transporter
oligo_HPY            PF08352.7     64 sp|P42065|APPF_BACSU -            329   4.3e-17   62.2   0.2   1   1     7e-20   8.6e-17   61.2   0.2     2    64   241   307   240   307 0.93 Oligopeptide/dipeptide transporter, C-terminal region
AAA_21               PF13304.1    303 sp|P42065|APPF_BACSU -            329   2.4e-08   34.3   0.8   2   2   1.4e-08   1.7e-05   24.9   0.1   233   302   157   224   148   225 0.94 AAA domain
SMC_N                PF02463.14   220 sp|P42065|APPF_BACSU -            329   0.00018   20.7   0.0   1   1   2.1e-07   0.00026   20.2   0.0    27   213    49   235    30   241 0.78 RecF/RecN/SMC N terminal domain
FtsK_SpoIIIE         PF01580.13   205 sp|P42065|APPF_BACSU -            329   0.00093   18.7   0.0   1   2   4.3e-06    0.0054   16.2   0.0     9    60    17    68    10    72 0.88 FtsK/SpoIIIE family
AAA_22               PF13401.1    131 sp|P42065|APPF_BACSU -            329     0.017   15.2   0.5   1   1   5.3e-05     0.065   13.3   0.5     9    36    51    74    44   225 0.70 AAA domain
DUF258               PF03193.11   161 sp|P42065|APPF_BACSU -            329     0.027   13.6   0.1   1   1   3.9e-05     0.048   12.8   0.1    15    51    25    62    13    98 0.81 Protein of unknown function, DUF258
ATP-synt_ab          PF00006.20   215 sp|P42065|APPF_BACSU -            329      0.03   13.8   0.0   1   1   3.1e-05     0.038   13.4   0.0     4    39    34    70    32   215 0.81 ATP synthase alpha/beta family, nucleotide-binding domain
AAA_16               PF13191.1    185 sp|P42065|APPF_BACSU -            329     0.032   14.2   0.0   1   1   5.1e-05     0.064   13.2   0.0    23   128    45   194    34   214 0.60 AAA ATPase domain
AAA_29               PF13555.1     62 sp|P42065|APPF_BACSU -            329     0.043   13.3   0.1   1   1   6.8e-05     0.084   12.4   0.1    13    39    37    62    30    80 0.81 P-loop containing region of AAA domain
G-alpha              PF00503.15   389 sp|P42065|APPF_BACSU -            329     0.044   12.4   0.0   1   1   4.1e-05     0.051   12.2   0.0    61   103    49   101    39   221 0.73 G-protein alpha subunit
PRK                  PF00485.13   194 sp|P42065|APPF_BACSU -            329      0.13   11.8   0.0   1   1   0.00016      0.19   11.2   0.0     2    24    49    71    48   142 0.72 Phosphoribulokinase / Uridine kinase family
Peptidase_S8         PF00082.17   282 sp|O31788|APRX_BACSU -            442     2e-64  217.4   1.8   1   1   1.9e-68   2.9e-64  216.9   1.8     1   279   150   437   150   439 0.88 Subtilase family
Pribosyltran         PF00156.22   125 sp|O34443|APT_BACSU  -            170   6.3e-18   64.7   0.6   1   1     1e-21   7.6e-18   64.4   0.6    15   125    34   148    18   148 0.91 Phosphoribosyl transferase domain
UPRTase              PF14681.1    207 sp|O34443|APT_BACSU  -            170    0.0012   18.0   0.0   1   1   2.1e-07    0.0015   17.7   0.0   120   160   110   150    77   162 0.84 Uracil phosphoribosyltransferase
Arabinose_Isome      PF02610.10   359 sp|P94523|ARAA_BACSU -            496  1.7e-180  599.6   2.0   1   1  2.7e-184    2e-180  599.3   2.0     1   359     1   356     1   356 0.99 L-arabinose isomerase
Arabinose_Iso_C      PF11762.3    115 sp|P94523|ARAA_BACSU -            496   2.6e-52  175.2   0.0   1   1   7.6e-56   5.6e-52  174.1   0.0     1   115   358   472   358   472 0.99 L-arabinose isomerase C-terminal domain
FGGY_C               PF02782.11   198 sp|P94524|ARAB_BACSU -            560     4e-42  144.0   0.1   1   1     8e-46   5.9e-42  143.5   0.1     2   198   288   486   287   486 0.92 FGGY family of carbohydrate kinases, C-terminal domain
FGGY_N               PF00370.16   245 sp|P94524|ARAB_BACSU -            560   6.3e-18   64.9   0.0   1   1   2.1e-21   1.6e-17   63.6   0.0     1   241     3   274     3   278 0.88 FGGY family of carbohydrate kinases, N-terminal domain
Aldolase_II          PF00596.16   184 sp|P94525|ARAD_BACSU -            229   3.5e-47  160.3   0.1   1   1   2.9e-51   4.3e-47  160.1   0.1     2   183     8   194     7   195 0.91 Class II Aldolase and Adducin N-terminal domain
Sugar_tr             PF00083.19   451 sp|P96710|ARAE_BACSU -            464  1.4e-111  373.3  39.2   1   1  6.7e-115  1.7e-111  373.0  39.2     5   451    30   462    26   462 0.95 Sugar (and other) transporter
MFS_1                PF07690.11   352 sp|P96710|ARAE_BACSU -            464     1e-39  136.2  48.5   1   2   9.1e-30   2.3e-26   92.3  22.1     3   257    32   312    30   315 0.84 Major Facilitator Superfamily
MFS_1                PF07690.11   352 sp|P96710|ARAE_BACSU -            464     1e-39  136.2  48.5   2   2   1.6e-17     4e-14   52.0  20.7    34   187   302   460   298   464 0.86 Major Facilitator Superfamily
MFS_2                PF13347.1    428 sp|P96710|ARAE_BACSU -            464   5.2e-11   41.5  36.0   1   3   3.3e-09   8.1e-06   24.4   3.4   242   343    42   141    28   143 0.85 MFS/sugar transport protein
MFS_2                PF13347.1    428 sp|P96710|ARAE_BACSU -            464   5.2e-11   41.5  36.0   2   3   3.3e-09     8e-06   24.4  15.6   138   343   147   388   141   392 0.76 MFS/sugar transport protein
MFS_3                PF05977.8    524 sp|P96710|ARAE_BACSU -            464   4.7e-06   25.0  23.2   1   2   2.8e-08   6.8e-05   21.1   6.4   251   360    57   166    50   199 0.86 Transmembrane secretion effector
MFS_3                PF05977.8    524 sp|P96710|ARAE_BACSU -            464   4.7e-06   25.0  23.2   2   2   8.4e-05      0.21    9.6   8.9    59   191   315   452   309   461 0.75 Transmembrane secretion effector
TRI12                PF06609.8    599 sp|P96710|ARAE_BACSU -            464   6.3e-05   21.3   5.1   1   1   2.6e-08   6.3e-05   21.3   5.1    86   229    68   220    50   234 0.74 Fungal trichothecene efflux pump (TRI12)
SBP_bac_1            PF01547.20   315 sp|P94528|ARAN_BACSU -            433   1.5e-47  162.8   3.2   1   1   3.1e-51   1.5e-47  162.8   3.2     4   312    45   335    42   339 0.93 Bacterial extracellular solute-binding protein
SBP_bac_8            PF13416.1    281 sp|P94528|ARAN_BACSU -            433   1.7e-28  100.1   2.2   1   1   4.3e-32   2.1e-28   99.8   2.2     1   279    51   366    51   368 0.80 Bacterial extracellular solute-binding protein
SBP_bac_6            PF13343.1    242 sp|P94528|ARAN_BACSU -            433     0.011   15.0   0.2   1   2   6.6e-05      0.32   10.2   0.1    39    77   127   175    91   245 0.73 Bacterial extracellular solute-binding protein
BPD_transp_1         PF00528.17   185 sp|P94529|ARAP_BACSU -            313   2.9e-17   62.7  13.8   2   2     2e-21   2.9e-17   62.7  13.8     3   175   107   301   102   308 0.84 Binding-protein-dependent transport system inner membrane component
BPD_transp_1         PF00528.17   185 sp|P94530|ARAQ_BACSU -            281   1.1e-18   67.3  15.8   2   2   7.7e-23   1.1e-18   67.3  15.8     3   181    97   272    95   276 0.88 Binding-protein-dependent transport system inner membrane component
AA_permease_2        PF13520.1    426 sp|O32204|ARCD_BACSU -            469   2.7e-59  200.8  50.3   1   1   1.2e-62   3.7e-59  200.3  50.3     2   405     8   437     8   459 0.86 Amino acid permease
AA_permease          PF00324.16   478 sp|O32204|ARCD_BACSU -            469   5.1e-25   87.7  44.8   1   1   3.9e-28   1.2e-24   86.5  45.1     5   407    15   417    12   460 0.81 Amino acid permease
Spore_permease       PF03845.8    320 sp|O32204|ARCD_BACSU -            469   0.00023   19.9  12.3   2   3   7.8e-08   0.00023   19.9  12.3   107   252   139   294    94   374 0.79 Spore germination protein
AA_kinase            PF00696.23   242 sp|P68729|ARGB_BACSU -            258   2.4e-39  135.3   0.7   1   1   1.8e-43   2.7e-39  135.1   0.7     1   242     3   234     3   234 0.94 Amino acid kinase family
Semialdhyde_dh       PF01118.19   121 sp|P23715|ARGC_BACSU -            345   3.3e-34  117.7   0.0   1   1   1.2e-37   5.9e-34  116.9   0.0     1   121     2   141     2   141 0.98 Semialdehyde dehydrogenase, NAD binding domain
Semialdhyde_dhC      PF02774.13   184 sp|P23715|ARGC_BACSU -            345   6.8e-34  117.3   0.0   1   1   1.9e-37   9.5e-34  116.8   0.0     1   184   158   316   158   316 0.98 Semialdehyde dehydrogenase, dimerisation domain
GFO_IDH_MocA         PF01408.17   120 sp|P23715|ARGC_BACSU -            345     0.024   15.1   0.0   1   1   1.6e-05      0.08   13.4   0.0     1    90     1    95     1    96 0.69 Oxidoreductase family, NAD-binding Rossmann fold
Aminotran_3          PF00202.16   339 sp|P36839|ARGD_BACSU -            385  3.7e-117  390.9   2.1   1   1  6.1e-121  4.5e-117  390.6   2.1     2   337    15   327    14   329 0.99 Aminotransferase class-III
Aminotran_1_2        PF00155.16   363 sp|P36839|ARGD_BACSU -            385   0.00049   19.1   0.0   2   2   3.7e-07    0.0028   16.6   0.0   165   299   186   315   153   373 0.81 Aminotransferase class I and II
Arginase             PF00491.16   278 sp|P39138|ARGI_BACSU -            296   3.1e-84  282.5   0.1   1   1   2.5e-88   3.7e-84  282.3   0.1     2   277     4   291     3   292 0.92 Arginase family
ArgJ                 PF01960.13   388 sp|P36843|ARGJ_BACSU -            406  2.6e-153  510.0   5.2   1   1  3.9e-157  2.9e-153  509.8   5.2     1   388    22   406    22   406 0.99 ArgJ family
Peptidase_M49        PF03571.10   551 sp|P36843|ARGJ_BACSU -            406      0.12   10.4   0.0   1   1   2.4e-05      0.18    9.8   0.0   304   368   278   345   276   352 0.88 Peptidase family M49
Arg_repressor        PF01316.16    70 sp|P17893|ARGR_BACSU -            149   1.8e-31  107.4   0.2   1   1   3.8e-35   2.8e-31  106.8   0.2     1    70     1    70     1    70 0.98 Arginine repressor, DNA binding domain
Arg_repressor_C      PF02863.13    70 sp|P17893|ARGR_BACSU -            149     1e-27   95.4   0.1   1   1   2.3e-31   1.7e-27   94.6   0.1     2    70    80   148    79   148 0.96 Arginine repressor, C-terminal domain
Lyase_1              PF00206.15   312 sp|O34858|ARLY_BACSU -            461   4.1e-72  243.0   0.0   1   1   1.6e-75   5.8e-72  242.5   0.0     1   312     7   301     7   301 0.98 Lyase
ASL_C2               PF14698.1     70 sp|O34858|ARLY_BACSU -            461   5.2e-27   93.7   0.0   1   1   3.6e-30   1.3e-26   92.3   0.0     1    69   364   432   364   433 0.98 Argininosuccinate lyase C-terminal
DUF1474              PF07342.6    100 sp|O34858|ARLY_BACSU -            461     0.074   13.2   0.1   1   1     5e-05      0.19   12.0   0.1    25    88    76   138    57   149 0.69 Protein of unknown function (DUF1474)
EPSP_synthase        PF00275.15   419 sp|P20691|AROA_BACSU -            428  1.4e-119  399.3   1.3   1   1    1e-123  1.5e-119  399.1   1.3     3   419     5   421     3   421 0.91 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase)
DHQ_synthase         PF01761.15   261 sp|P31102|AROB_BACSU -            362     1e-96  322.8   0.1   1   1  3.3e-100   1.2e-96  322.6   0.1     2   260    68   323    67   324 0.97 3-dehydroquinate synthase
Fe-ADH_2             PF13685.1    250 sp|P31102|AROB_BACSU -            362   4.1e-16   59.0   0.0   1   2   1.5e-18   5.7e-15   55.2   0.0     2   192    17   220    16   244 0.73 Iron-containing alcohol dehydrogenase
Fe-ADH               PF00465.14   366 sp|P31102|AROB_BACSU -            362   2.1e-11   43.0   0.0   1   1   3.4e-14   1.3e-10   40.5   0.0     4   283    15   277    13   318 0.73 Iron-containing alcohol dehydrogenase
Ovate                PF04844.8     60 sp|P31102|AROB_BACSU -            362    0.0076   16.0   0.0   1   1   4.9e-06     0.018   14.8   0.0     4    32   174   202   172   209 0.95 Transcriptional repressor, ovate
Chorismate_synt      PF01264.16   346 sp|P31104|AROC_BACSU -            390    9e-140  465.0   4.4   1   1  1.4e-143    1e-139  464.8   4.4     1   345     1   365     1   366 0.97 Chorismate synthase
P4Ha_N               PF08336.6    134 sp|P31104|AROC_BACSU -            390       0.1   12.3   0.1   1   1   3.3e-05      0.25   11.1   0.1    70   110    78   120    75   124 0.87 Prolyl 4-Hydroxylase alpha-subunit, N-terminal region
DHquinase_I          PF01487.10   224 sp|P35146|AROD_BACSU -            255   1.2e-69  234.4   0.1   1   1   1.8e-73   1.4e-69  234.2   0.1     2   223    20   246    19   247 0.99 Type I 3-dehydroquinase
RNA_pol_Rpb2_5       PF04567.12    48 sp|P35146|AROD_BACSU -            255      0.14   12.1   0.1   2   2   7.9e-05      0.59   10.1   0.0    16    33   131   151   127   191 0.79 RNA polymerase Rpb2, domain 5
Shikimate_dh_N       PF08501.6     83 sp|P54374|AROE_BACSU -            280   3.3e-32  110.3   0.0   1   1   4.6e-35   8.6e-32  109.0   0.0     1    83     7    89     7    89 0.99 Shikimate dehydrogenase substrate binding domain
Shikimate_DH         PF01488.15   135 sp|P54374|AROE_BACSU -            280     1e-19   70.9   0.0   1   1   9.4e-23   1.7e-19   70.2   0.0     9   108   117   219   110   240 0.88 Shikimate / quinate 5-dehydrogenase
Saccharop_dh         PF03435.13   386 sp|P54374|AROE_BACSU -            280   0.00012   21.2   0.0   1   1   8.9e-08   0.00017   20.7   0.0     2   123   124   244   123   247 0.82 Saccharopine dehydrogenase
OCD_Mu_crystall      PF02423.10   314 sp|P54374|AROE_BACSU -            280    0.0012   17.6   0.0   1   1   9.7e-07    0.0018   17.1   0.0   134   203   125   194   112   202 0.92 Ornithine cyclodeaminase/mu-crystallin family
F420_oxidored        PF03807.12    96 sp|P54374|AROE_BACSU -            280    0.0081   16.5   0.0   1   1   1.2e-05     0.022   15.1   0.0     4    77   125   200   122   221 0.80 NADP oxidoreductase coenzyme F420-dependent
DUF2338              PF10100.4    429 sp|P54374|AROE_BACSU -            280     0.044   12.1   0.0   1   1     3e-05     0.055   11.8   0.0     3    65   122   184   120   216 0.84 Uncharacterized protein conserved in bacteria (DUF2338)
Malic_M              PF03949.10   255 sp|P54374|AROE_BACSU -            280     0.062   12.8   0.0   1   1   5.9e-05      0.11   12.0   0.0    15    47   110   142   105   180 0.90 Malic enzyme, NAD binding domain
Stanniocalcin        PF03298.8    209 sp|P54374|AROE_BACSU -            280      0.16   10.9   0.0   1   1   0.00013      0.24   10.4   0.0    84   147    99   162    95   173 0.91 Stanniocalcin family
DAHP_synth_1         PF00793.15   272 sp|P39912|AROG_BACSU -            358   1.7e-82  276.1   0.0   1   1   9.1e-86   2.3e-82  275.7   0.0     9   271   111   355    94   356 0.96 DAHP synthetase I family
CM_2                 PF01817.16    81 sp|P39912|AROG_BACSU -            358   4.7e-22   77.8   0.5   1   1   1.9e-25   4.7e-22   77.8   0.5     1    80    10    88    10    89 0.98 Chorismate mutase type II
NeuB                 PF03102.9    241 sp|P39912|AROG_BACSU -            358   5.7e-08   32.1   0.0   1   1   4.3e-11   1.1e-07   31.3   0.0    43   231   156   352   128   357 0.80 NeuB family
Glu_syn_central      PF04898.9    288 sp|P39912|AROG_BACSU -            358     0.037   13.2   0.7   2   2   5.6e-05      0.14   11.4   0.1   134   184   230   280   171   319 0.80 Glutamate synthase central domain
GFO_IDH_MocA         PF01408.17   120 sp|P39912|AROG_BACSU -            358     0.066   13.7   0.2   2   2   0.00035      0.87   10.1   0.0    39   114   174   253   150   258 0.86 Oxidoreductase family, NAD-binding Rossmann fold
HOOK                 PF05622.7    713 sp|P39912|AROG_BACSU -            358     0.074   10.8   0.3   1   1   3.8e-05     0.094   10.5   0.3   186   223     4    41     1    89 0.83 HOOK protein
SKI                  PF01202.17   158 sp|P37944|AROK_BACSU -            186   1.2e-42  145.4   0.0   1   1   1.1e-45   1.4e-42  145.2   0.0     1   158    20   177    20   177 0.96 Shikimate kinase
AAA_18               PF13238.1    129 sp|P37944|AROK_BACSU -            186   2.1e-06   28.0   0.4   1   1   3.6e-09   4.4e-06   27.0   0.4     1    43    14    57    14   168 0.64 AAA domain
AAA_17               PF13207.1    121 sp|P37944|AROK_BACSU -            186   3.7e-06   27.7   0.6   1   1   1.4e-08   1.8e-05   25.5   0.6     2    62    14    67    13   183 0.58 AAA domain
AAA                  PF00004.24   132 sp|P37944|AROK_BACSU -            186     5e-05   23.5   0.0   1   2     4e-07   0.00049   20.2   0.0     1    31    14    44    14    86 0.70 ATPase family associated with various cellular activities (AAA)
AAA_14               PF13173.1    128 sp|P37944|AROK_BACSU -            186   0.00024   21.0   0.3   1   1   3.8e-07   0.00047   20.0   0.3     3    65    12    74    10    84 0.73 AAA domain
AAA_22               PF13401.1    131 sp|P37944|AROK_BACSU -            186     0.029   14.5   0.1   1   1   3.6e-05     0.044   13.9   0.1     5    31    12    38     5   159 0.84 AAA domain
PX                   PF00787.19   113 sp|P37944|AROK_BACSU -            186     0.032   14.0   0.0   1   1   4.3e-05     0.053   13.3   0.0    38    80    33    66    24   111 0.80 PX domain
Nnf1                 PF03980.9    109 sp|P37944|AROK_BACSU -            186      0.04   13.9   0.2   1   1   5.7e-05     0.071   13.1   0.2    17    71   116   170   102   177 0.84 Nnf1
GCR1_C               PF12550.3     81 sp|P37944|AROK_BACSU -            186     0.057   13.2   0.1   1   1   0.00012      0.14   12.0   0.0    41    77   136   172   115   176 0.86 Transcriptional activator of glycolytic enzymes
Amino_oxidase        PF01593.19   450 sp|P37944|AROK_BACSU -            186     0.063   12.3   0.0   1   1     6e-05     0.074   12.1   0.0   114   261    34   176     9   179 0.81 Flavin containing amine oxidoreductase
AAA_16               PF13191.1    185 sp|P37944|AROK_BACSU -            186     0.088   12.7   0.0   1   1   0.00013      0.16   11.9   0.0    24    60    11    44     3    67 0.85 AAA ATPase domain
AAA_33               PF13671.1    143 sp|P37944|AROK_BACSU -            186      0.16   11.8   0.0   1   1   0.00037      0.46   10.3   0.0     2    32    14    44    14   163 0.80 AAA domain
DHquinase_II         PF01220.14   140 sp|P54517|AROQ_BACSU -            148   9.5e-59  196.7   0.0   1   1   7.2e-63   1.1e-58  196.5   0.0     3   139     4   140     2   141 0.98 Dehydroquinase class II
SBF                  PF01758.11   187 sp|P45946|ARSB_BACSU -            346   5.7e-68  228.0  18.9   2   3   3.8e-72   5.7e-68  228.0  18.9     1   186    49   245    49   246 0.99 Sodium Bile acid symporter family
LMWPc                PF01451.16   138 sp|P45947|ARSC_BACSU -            139     1e-38  132.7   0.0   1   1   7.8e-43   1.2e-38  132.5   0.0     1   137     6   134     6   135 0.93 Low molecular weight phosphotyrosine protein phosphatase
ABC_tran             PF00005.22   137 sp|P54537|ARTM_BACSU -            240   8.8e-40  136.1   0.0   1   1     3e-42   1.2e-39  135.7   0.0     1   137    17   165    17   165 0.96 ABC transporter
AAA_21               PF13304.1    303 sp|P54537|ARTM_BACSU -            240   2.3e-17   63.9   0.0   1   2   9.8e-07   0.00038   20.5   0.2     3    23    31    51    29    83 0.73 AAA domain
AAA_21               PF13304.1    303 sp|P54537|ARTM_BACSU -            240   2.3e-17   63.9   0.0   2   2   5.2e-13     2e-10   41.0   0.0   220   298   120   195    88   198 0.83 AAA domain
SMC_N                PF02463.14   220 sp|P54537|ARTM_BACSU -            240   1.1e-10   41.0   0.6   1   1   1.2e-12   4.9e-10   39.0   0.6    23   205    26   202     2   214 0.73 RecF/RecN/SMC N terminal domain
AAA_15               PF13175.1    415 sp|P54537|ARTM_BACSU -            240   2.5e-05   23.5   0.2   2   2   2.2e-05    0.0084   15.1   0.0   371   411   154   195   131   199 0.87 AAA ATPase domain
AAA_16               PF13191.1    185 sp|P54537|ARTM_BACSU -            240   2.5e-05   24.3   0.1   1   1   1.9e-07   7.4e-05   22.8   0.1    21    59    24    61    10   210 0.65 AAA ATPase domain
AAA_10               PF12846.2    304 sp|P54537|ARTM_BACSU -            240   3.9e-05   23.2   0.1   1   2   6.8e-06    0.0026   17.2   0.0     4    37    30    63    28    72 0.87 AAA-like domain
AAA_13               PF13166.1    712 sp|P54537|ARTM_BACSU -            240   6.5e-05   21.6   0.0   2   2   1.1e-05    0.0044   15.5   0.0   527   580   154   205   142   234 0.85 AAA domain
T2SE                 PF00437.15   272 sp|P54537|ARTM_BACSU -            240   6.5e-05   21.9   0.3   1   1   3.4e-07   0.00013   20.9   0.1   115   187    14    83     3    99 0.86 Type II/IV secretion system protein
AAA_22               PF13401.1    131 sp|P54537|ARTM_BACSU -            240   8.3e-05   22.7   0.2   1   1   1.2e-06   0.00049   20.2   0.2     4   123    27   193    24   201 0.60 AAA domain
AAA_33               PF13671.1    143 sp|P54537|ARTM_BACSU -            240    0.0001   22.1   0.0   1   1   4.2e-07   0.00016   21.5   0.0     1    42    29    74    29   188 0.62 AAA domain
ABC_ATPase           PF09818.4    448 sp|P54537|ARTM_BACSU -            240   0.00012   20.8   1.7   2   2    0.0001     0.039   12.5   0.3   324   413   138   211   133   233 0.82 Predicted ATPase of the ABC class
MobB                 PF03205.9    140 sp|P54537|ARTM_BACSU -            240   0.00016   21.3   0.2   1   1   2.1e-06   0.00082   19.0   0.1     2    52    29    73    28    84 0.81 Molybdopterin guanine dinucleotide synthesis protein B
AAA_29               PF13555.1     62 sp|P54537|ARTM_BACSU -            240   0.00019   20.9   0.1   1   1   9.1e-07   0.00036   20.0   0.1    20    40    25    44    15    58 0.82 P-loop containing region of AAA domain
AAA_23               PF13476.1    202 sp|P54537|ARTM_BACSU -            240   0.00027   21.3   0.4   1   2   1.8e-05    0.0072   16.6   0.0    15    41    20    49     9    50 0.71 AAA domain
DUF258               PF03193.11   161 sp|P54537|ARTM_BACSU -            240   0.00028   20.0   0.6   1   1   1.3e-06   0.00049   19.3   0.2    15    61     6    53     1    81 0.78 Protein of unknown function, DUF258
SbcCD_C              PF13558.1     90 sp|P54537|ARTM_BACSU -            240   0.00075   19.3   0.1   1   1   2.4e-05    0.0093   15.8   0.1    32    89   136   180   127   181 0.77 Putative exonuclease SbcCD, C subunit
AAA_25               PF13481.1    194 sp|P54537|ARTM_BACSU -            240   0.00076   18.9   0.1   1   2   5.8e-05     0.023   14.1   0.0    26    50    20    44     4    66 0.88 AAA domain
AAA_17               PF13207.1    121 sp|P54537|ARTM_BACSU -            240     0.001   19.8   0.4   1   1   7.3e-06    0.0029   18.4   0.5     1    17    29    45    29   174 0.93 AAA domain
Arch_ATPase          PF01637.13   234 sp|P54537|ARTM_BACSU -            240    0.0053   16.4   0.4   1   1   7.4e-05     0.029   14.0   0.4     8   162    17   192    11   208 0.52 Archaeal ATPase
AAA_18               PF13238.1    129 sp|P54537|ARTM_BACSU -            240    0.0093   16.2   0.3   1   1   9.1e-05     0.036   14.3   0.3     1    42    30    88    30   216 0.75 AAA domain
IIGP                 PF05049.8    376 sp|P54537|ARTM_BACSU -            240    0.0097   14.7   0.1   1   1     5e-05      0.02   13.7   0.1    26    68    15    60     2    75 0.69 Interferon-inducible GTPase (IIGP)
Miro                 PF08477.8    119 sp|P54537|ARTM_BACSU -            240    0.0097   16.3   0.0   1   1   4.3e-05     0.017   15.6   0.0     2    44    30    71    29   116 0.67 Miro-like protein
FtsK_SpoIIIE         PF01580.13   205 sp|P54537|ARTM_BACSU -            240      0.01   15.3   0.4   1   1   5.7e-05     0.022   14.2   0.0    23    58    12    47     4    50 0.83 FtsK/SpoIIIE family
DEAD                 PF00270.24   169 sp|P54537|ARTM_BACSU -            240     0.013   14.9   0.0   1   1   6.1e-05     0.024   14.1   0.0     9    85    22   199    15   223 0.86 DEAD/DEAH box helicase
UPF0079              PF02367.12   123 sp|P54537|ARTM_BACSU -            240     0.016   14.8   0.0   1   1   7.2e-05     0.028   14.0   0.0     6    69    18    89    13   115 0.73 Uncharacterised P-loop hydrolase UPF0079
AAA_14               PF13173.1    128 sp|P54537|ARTM_BACSU -            240     0.017   14.9   0.1   1   1   0.00084      0.33   10.8   0.1     2    39    27    62    26   206 0.84 AAA domain
AAA_30               PF13604.1    196 sp|P54537|ARTM_BACSU -            240      0.02   14.5   0.0   1   1   0.00014     0.054   13.0   0.0    12    49    22    58    15    66 0.76 AAA domain
DUF87                PF01935.12   229 sp|P54537|ARTM_BACSU -            240     0.022   14.5   0.2   1   2    0.0009      0.35   10.6   0.1    26    54    30    56    28    63 0.80 Domain of unknown function DUF87
Mg_chelatase         PF01078.16   207 sp|P54537|ARTM_BACSU -            240     0.024   13.7   0.3   1   2   0.00077       0.3   10.2   0.0     6    48    11    53     6    99 0.77 Magnesium chelatase, subunit ChlI
NACHT                PF05729.7    166 sp|P54537|ARTM_BACSU -            240     0.038   13.6   0.0   1   1   0.00021     0.083   12.5   0.0     2    20    29    47    28    53 0.89 NACHT domain
ATP_bind_1           PF03029.12   238 sp|P54537|ARTM_BACSU -            240     0.039   13.4   0.7   1   2   0.00087      0.34   10.4   0.0     1    17    32    48    32    60 0.85 Conserved hypothetical ATP binding protein
ArgK                 PF03308.11   267 sp|P54537|ARTM_BACSU -            240     0.039   12.7   0.1   1   1   0.00018     0.071   11.8   0.1    15    57    13    55     2    70 0.83 ArgK protein
MMR_HSR1             PF01926.18   116 sp|P54537|ARTM_BACSU -            240     0.056   13.4   0.3   1   1   0.00021     0.084   12.8   0.3     2    21    30    54    29   194 0.74 50S ribosome-binding GTPase
Dynamin_N            PF00350.18   168 sp|P54537|ARTM_BACSU -            240     0.069   12.9   0.3   1   1   0.00027       0.1   12.3   0.3     1    47    30    74    30   194 0.65 Dynamin family
PRK                  PF00485.13   194 sp|P54537|ARTM_BACSU -            240     0.083   12.4   0.0   1   1   0.00037      0.15   11.6   0.0     1    29    29    56    29   116 0.56 Phosphoribulokinase / Uridine kinase family
AAA_19               PF13245.1     76 sp|P54537|ARTM_BACSU -            240      0.14   11.8   0.1   1   1     0.001       0.4   10.4   0.1     7    29    25    46    19    57 0.79 Part of AAA domain
SBP_bac_3            PF00497.15   225 sp|P54535|ARTP_BACSU -            255   5.5e-64  215.4   2.3   1   1     3e-67   6.3e-64  215.2   2.3     1   224    34   252    34   253 0.94 Bacterial extracellular solute-binding proteins, family 3
Phosphonate-bd       PF12974.2    243 sp|P54535|ARTP_BACSU -            255   2.7e-11   43.3   0.7   1   1   2.9e-13   6.1e-10   38.8   0.7    18   232    59   251    46   254 0.79 ABC transporter, phosphonate, periplasmic substrate-binding protein
NMT1                 PF09084.6    216 sp|P54535|ARTP_BACSU -            255     6e-11   42.3   1.2   1   2   0.00037      0.79    9.2   0.0   103   149    56    99    50   109 0.87 NMT1/THI5 like
NMT1                 PF09084.6    216 sp|P54535|ARTP_BACSU -            255     6e-11   42.3   1.2   2   2   1.5e-12   3.2e-09   36.6   0.9    17   173    66   211    66   236 0.76 NMT1/THI5 like
OpuAC                PF04069.7    257 sp|P54535|ARTP_BACSU -            255   0.00014   21.3   0.1   1   1   1.4e-07    0.0003   20.2   0.1    19   159    60   169    57   186 0.68 Substrate binding domain of ABC-type glycine betaine transport system
XkdN                 PF08890.6    136 sp|P54535|ARTP_BACSU -            255     0.001   18.8   0.6   1   1   1.4e-06     0.003   17.3   0.1    19    98   127   209   115   214 0.84 Phage XkdN-like protein
Methyltransf_31      PF13847.1    152 sp|P54535|ARTP_BACSU -            255    0.0093   15.5   0.1   1   1     1e-05     0.021   14.4   0.1    41    84    58   105    42   155 0.76 Methyltransferase domain
SBP_bac_5            PF00496.17   374 sp|P54535|ARTP_BACSU -            255     0.074   11.8   0.2   1   1     9e-05      0.19   10.5   0.1   259   289    42    78    26   110 0.65 Bacterial extracellular solute-binding proteins, family 5 Middle
BPD_transp_1         PF00528.17   185 sp|P54536|ARTQ_BACSU -            219   5.7e-23   81.3   9.4   1   1   3.9e-27   5.7e-23   81.3   9.4     1   184    33   216    31   217 0.96 Binding-protein-dependent transport system inner membrane component
Asn_synthase         PF00733.16   255 sp|P54420|ASNB_BACSU -            632   2.9e-81  272.7   0.0   1   1   2.1e-84   4.4e-81  272.1   0.0     1   255   240   544   240   544 0.99 Asparagine synthase
GATase_7             PF13537.1    125 sp|P54420|ASNB_BACSU -            632     2e-45  153.5   0.0   1   1   1.7e-48   3.6e-45  152.7   0.0     2   124    51   168    50   169 0.97 Glutamine amidotransferase domain
GATase_6             PF13522.1    133 sp|P54420|ASNB_BACSU -            632   3.1e-39  133.9   0.0   1   1   2.5e-42   5.3e-39  133.2   0.0     1   133    35   163    35   163 0.98 Glutamine amidotransferase domain
GATase_2             PF00310.16   361 sp|P54420|ASNB_BACSU -            632     1e-05   24.4   0.0   2   3   3.4e-05     0.071   11.7   0.0   216   265    63   102    59   110 0.81 Glutamine amidotransferases class-II
GATase_2             PF00310.16   361 sp|P54420|ASNB_BACSU -            632     1e-05   24.4   0.0   3   3   0.00013      0.28    9.8   0.0   310   360   112   163   102   164 0.78 Glutamine amidotransferases class-II
QueC                 PF06508.8    210 sp|P54420|ASNB_BACSU -            632   0.00073   18.8   0.0   1   1   8.6e-07    0.0018   17.5   0.0     5    55   262   312   260   324 0.92 Queuosine biosynthesis protein QueC
DUF3700              PF12481.3    228 sp|P54420|ASNB_BACSU -            632     0.014   14.6   0.0   1   1   1.5e-05     0.033   13.4   0.0    79   172    74   164    63   172 0.68 Aluminium induced protein
NAD_synthase         PF02540.12   242 sp|P54420|ASNB_BACSU -            632     0.019   13.8   0.0   1   1   2.1e-05     0.045   12.6   0.0     2    82   238   318   237   333 0.81 NAD synthase
Asn_synthase         PF00733.16   255 sp|P42113|ASNH_BACSU -            747   3.1e-52  177.6   0.0   1   1   2.2e-55   6.4e-52  176.5   0.0     2   255   252   531   251   531 0.94 Asparagine synthase
GATase_7             PF13537.1    125 sp|P42113|ASNH_BACSU -            747   1.6e-42  144.1   0.0   1   1   1.6e-45   4.8e-42  142.6   0.0     2   123    51   165    50   167 0.96 Glutamine amidotransferase domain
GATase_6             PF13522.1    133 sp|P42113|ASNH_BACSU -            747   1.9e-36  124.9   0.0   1   1     2e-39     6e-36  123.3   0.0     1   133    35   161    35   161 0.98 Glutamine amidotransferase domain
GATase_2             PF00310.16   361 sp|P42113|ASNH_BACSU -            747   1.3e-05   24.0   0.0   2   3     2e-05     0.061   12.0   0.0   215   246    62    99    15   112 0.78 Glutamine amidotransferases class-II
GATase_2             PF00310.16   361 sp|P42113|ASNH_BACSU -            747   1.3e-05   24.0   0.0   3   3   0.00013      0.39    9.3   0.0   316   360   116   161   106   162 0.82 Glutamine amidotransferases class-II
NAD_synthase         PF02540.12   242 sp|P42113|ASNH_BACSU -            747   0.00011   21.2   0.0   1   1   6.4e-08   0.00019   20.4   0.0     5    79   252   326   248   332 0.82 NAD synthase
Asn_synthase         PF00733.16   255 sp|O05272|ASNO_BACSU -            614     4e-71  239.5   0.0   1   1   2.2e-74   5.4e-71  239.0   0.0     2   255   242   529   241   529 0.93 Asparagine synthase
GATase_7             PF13537.1    125 sp|O05272|ASNO_BACSU -            614   1.1e-45  154.3   0.0   1   1   8.7e-49   2.1e-45  153.4   0.0     1   125    48   169    48   169 0.96 Glutamine amidotransferase domain
GATase_6             PF13522.1    133 sp|O05272|ASNO_BACSU -            614     3e-38  130.7   0.0   1   1     3e-41   7.4e-38  129.5   0.0     1   133    33   163    33   163 0.96 Glutamine amidotransferase domain
GATase_2             PF00310.16   361 sp|O05272|ASNO_BACSU -            614   2.2e-05   23.3   0.0   1   2     3e-05     0.073   11.7   0.0   216   264    61   101    58   110 0.80 Glutamine amidotransferases class-II
GATase_2             PF00310.16   361 sp|O05272|ASNO_BACSU -            614   2.2e-05   23.3   0.0   2   2   0.00012      0.29    9.7   0.0   307   357   109   160   100   164 0.80 Glutamine amidotransferases class-II
DUF3700              PF12481.3    228 sp|O05272|ASNO_BACSU -            614   0.00064   19.0   0.1   1   1   5.4e-07    0.0013   17.9   0.1   124   163   116   155    65   171 0.87 Aluminium induced protein
Lyase_1              PF00206.15   312 sp|P26899|ASPA_BACSU -            475  1.6e-119  398.7   1.3   1   1  2.7e-123    2e-119  398.4   1.3     1   312    16   345    16   345 0.99 Lyase
FumaraseC_C          PF10415.4     55 sp|P26899|ASPA_BACSU -            475   5.1e-21   74.4   0.1   1   1   2.1e-24   1.6e-20   72.9   0.1     2    55   412   465   411   465 0.98 Fumarase C C-terminus
Asparaginase         PF00710.15   313 sp|P26900|ASPG1_BACSU -            329   1.1e-91  307.0   0.0   1   1   1.6e-95   1.2e-91  306.8   0.0     1   307     3   310     3   316 0.97 Asparaginase
DUF2070              PF09843.4    179 sp|P26900|ASPG1_BACSU -            329     0.049   13.1   1.6   1   2   1.3e-05     0.099   12.1   0.2    73   116    45    92    24   107 0.81 Predicted membrane protein (DUF2070)
Asparaginase         PF00710.15   313 sp|O34482|ASPG2_BACSU -            375   1.5e-81  273.6   4.6   1   1   1.2e-85   1.8e-81  273.4   4.6     1   313    52   369    52   369 0.95 Asparaginase
AA_permease_2        PF13520.1    426 sp|O07002|ASPP_BACSU -            520   1.5e-47  162.1  55.0   1   2     3e-51   1.5e-47  162.1  55.0     2   405    12   419    11   442 0.83 Amino acid permease
AA_permease          PF00324.16   478 sp|O07002|ASPP_BACSU -            520   1.6e-27   96.0  54.2   1   1   9.3e-31   4.6e-27   94.5  53.6     1   458    15   442    15   475 0.82 Amino acid permease
Arginosuc_synth      PF00764.14   388 sp|O34347|ASSY_BACSU -            403  2.2e-187  622.8   0.0   1   1  8.5e-191  2.5e-187  622.6   0.0     1   387     8   392     8   393 1.00 Arginosuccinate synthase
tRNA_Me_trans        PF03054.11   356 sp|O34347|ASSY_BACSU -            403    0.0001   21.0   0.1   1   1   7.1e-08   0.00021   19.9   0.1     1    37     5    41     5    65 0.87 tRNA methyl transferase
QueC                 PF06508.8    210 sp|O34347|ASSY_BACSU -            403    0.0056   15.9   0.0   1   1   3.2e-06    0.0096   15.2   0.0     1    74     6    76     6   120 0.77 Queuosine biosynthesis protein QueC
ThiI                 PF02568.9    197 sp|O34347|ASSY_BACSU -            403     0.016   14.6   0.0   1   1   9.7e-06     0.029   13.8   0.0     2   115     3   117     2   136 0.63 Thiamine biosynthesis protein (ThiI)
Asn_synthase         PF00733.16   255 sp|O34347|ASSY_BACSU -            403     0.062   12.7   0.0   1   1   3.3e-05     0.098   12.1   0.0    16    87     3    71     1    92 0.83 Asparagine synthase
E1-E2_ATPase         PF00122.15   230 sp|O34431|ATCL_BACSU -            890   6.9e-73  244.4   4.7   1   1   5.1e-76   6.9e-73  244.4   4.7     2   230    83   316    82   316 0.99 E1-E2 ATPase
Cation_ATPase_C      PF00689.16   182 sp|O34431|ATCL_BACSU -            890   4.3e-53  179.5   3.3   1   1   3.2e-56   4.3e-53  179.5   3.3     1   175   715   880   715   886 0.95 Cation transporting ATPase, C-terminus
Hydrolase            PF00702.21   215 sp|O34431|ATCL_BACSU -            890   4.2e-38  131.9   0.0   1   1   8.8e-41   1.2e-37  130.4   0.0     3   215   322   645   320   645 0.70 haloacid dehalogenase-like hydrolase
Hydrolase_like2      PF13246.1     91 sp|O34431|ATCL_BACSU -            890   1.1e-20   73.4   0.0   1   1     2e-23   2.7e-20   72.1   0.0     1    91   384   471   384   471 0.88 Putative hydrolase of sodium-potassium ATPase alpha subunit
Cation_ATPase_N      PF00690.21    69 sp|O34431|ATCL_BACSU -            890   2.2e-20   71.8   0.1   1   1   4.5e-23     6e-20   70.4   0.1     2    69     4    71     3    71 0.97 Cation transporter/ATPase, N-terminus
HAD                  PF12710.2    192 sp|O34431|ATCL_BACSU -            890     5e-19   69.2   0.0   1   1   8.2e-22   1.1e-18   68.1   0.0     1   192   323   642   323   642 0.79 haloacid dehalogenase-like hydrolase
Hydrolase_3          PF08282.7    254 sp|O34431|ATCL_BACSU -            890   1.1e-05   25.2   2.1   1   2   0.00025      0.33   10.4   0.0    18    55   539   576   535   617 0.79 haloacid dehalogenase-like hydrolase
Hydrolase_3          PF08282.7    254 sp|O34431|ATCL_BACSU -            890   1.1e-05   25.2   2.1   2   2   2.3e-05     0.031   13.8   0.7   194   246   617   670   613   678 0.80 haloacid dehalogenase-like hydrolase
HAD_2                PF13419.1    176 sp|O34431|ATCL_BACSU -            890     0.022   15.0   0.0   1   1    0.0001      0.14   12.4   0.0    29   117   472   576   450   585 0.65 Haloacid dehalogenase-like hydrolase
DUF3325              PF11804.3    106 sp|O34431|ATCL_BACSU -            890     0.028   14.3   0.0   1   2   2.1e-05     0.028   14.3   0.0     7    56   728   778   723   814 0.82 Protein of unknown function (DUF3325)
Hydrolase_6          PF13344.1    101 sp|O34431|ATCL_BACSU -            890      0.12   12.3   0.0   1   1   0.00033      0.45   10.4   0.0    15    52   537   574   534   584 0.93 Haloacid dehalogenase-like hydrolase
ATP-synt_A           PF00119.15   215 sp|P37813|ATP6_BACSU -            244   4.9e-68  228.8  18.4   1   1   7.5e-72   5.6e-68  228.6  18.4     1   215    13   238    13   238 0.97 ATP synthase A chain
FtsX                 PF02687.16   121 sp|P37813|ATP6_BACSU -            244      0.42   10.3  20.8   3   3   1.5e-05      0.11   12.2   4.8    58   118   178   242   168   244 0.90 FtsX-like permease family
ATP-synt_ab          PF00006.20   215 sp|P37808|ATPA_BACSU -            502   3.3e-72  242.4   0.0   1   1   1.6e-75   4.7e-72  241.9   0.0     1   215   148   364   148   364 0.99 ATP synthase alpha/beta family, nucleotide-binding domain
ATP-synt_ab_C        PF00306.22   113 sp|P37808|ATPA_BACSU -            502   2.3e-23   82.8   0.4   2   2   3.9e-26   1.2e-22   80.5   0.2     1   104   376   471   376   479 0.88 ATP synthase alpha/beta chain, C terminal domain
ATP-synt_ab_N        PF02874.18    69 sp|P37808|ATPA_BACSU -            502   1.2e-21   76.6   5.3   1   1   4.2e-25   1.2e-21   76.6   3.3     2    69    25    92    24    92 0.99 ATP synthase alpha/beta family, beta-barrel domain
HAS-barrel           PF09378.5     91 sp|P37808|ATPA_BACSU -            502   9.6e-09   35.0   1.2   1   2   1.7e-11   5.2e-08   32.6   0.5     5    91    28    90    25    90 0.95 HAS barrel domain
Arginosuc_synth      PF00764.14   388 sp|P37808|ATPA_BACSU -            502     0.067   12.2   0.0   1   1   3.4e-05       0.1   11.6   0.0    10    57   176   223   173   257 0.92 Arginosuccinate synthase
ATP-synt_ab          PF00006.20   215 sp|P37809|ATPB_BACSU -            473   6.9e-67  225.0   0.0   1   1   1.1e-69   1.1e-66  224.4   0.0     1   215   137   351   137   351 0.98 ATP synthase alpha/beta family, nucleotide-binding domain
ATP-synt_ab_C        PF00306.22   113 sp|P37809|ATPB_BACSU -            473   1.4e-27   96.4   0.4   1   1   2.6e-30   2.6e-27   95.5   0.4     2   107   365   465   364   472 0.93 ATP synthase alpha/beta chain, C terminal domain
ATP-synt_ab_N        PF02874.18    69 sp|P37809|ATPB_BACSU -            473   1.8e-24   85.7   0.3   1   1   4.2e-27   4.2e-24   84.5   0.3     1    69     6    80     6    80 0.97 ATP synthase alpha/beta family, beta-barrel domain
DUF258               PF03193.11   161 sp|P37809|ATPB_BACSU -            473   5.2e-05   22.4   0.0   1   1   9.5e-08   9.4e-05   21.6   0.0    23    91   139   208   120   213 0.80 Protein of unknown function, DUF258
AAA                  PF00004.24   132 sp|P37809|ATPB_BACSU -            473    0.0013   18.8   0.1   1   2     6e-05     0.059   13.5   0.0     3    74   156   261   154   305 0.77 ATPase family associated with various cellular activities (AAA)
AAA_25               PF13481.1    194 sp|P37809|ATPB_BACSU -            473    0.0016   17.8   0.0   1   1   3.1e-06     0.003   16.9   0.0    12   100   132   221   114   271 0.63 AAA domain
AAA_16               PF13191.1    185 sp|P37809|ATPB_BACSU -            473     0.013   15.5   0.1   1   1   3.7e-05     0.036   14.0   0.0    29    58   156   187   149   212 0.81 AAA ATPase domain
NACHT                PF05729.7    166 sp|P37809|ATPB_BACSU -            473     0.015   14.9   0.0   1   1   3.6e-05     0.036   13.7   0.0     6    28   157   179   154   201 0.89 NACHT domain
AAA_22               PF13401.1    131 sp|P37809|ATPB_BACSU -            473     0.025   14.7   0.0   1   1   5.5e-05     0.054   13.6   0.0     9   100   156   258   150   274 0.72 AAA domain
ABC_tran             PF00005.22   137 sp|P37809|ATPB_BACSU -            473     0.029   14.6   0.1   1   1   6.5e-05     0.064   13.5   0.1    10    44   150   184   148   248 0.81 ABC transporter
Arch_ATPase          PF01637.13   234 sp|P37809|ATPB_BACSU -            473     0.035   13.8   0.0   1   1   7.1e-05      0.07   12.8   0.0    25    68   156   199   153   283 0.63 Archaeal ATPase
NB-ARC               PF00931.17   287 sp|P37809|ATPB_BACSU -            473     0.041   12.7   0.1   1   1   8.5e-05     0.084   11.7   0.1    22    63   154   194   143   211 0.76 NB-ARC domain
RNA_helicase         PF00910.17   107 sp|P37809|ATPB_BACSU -            473     0.049   13.8   0.0   1   1   0.00016      0.15   12.2   0.0     3    26   156   179   154   296 0.89 RNA helicase
KaiC                 PF06745.8    227 sp|P37809|ATPB_BACSU -            473      0.14   11.2   2.8   1   1   0.00013      0.13   11.3   0.7     2    71   136   206   135   214 0.86 KaiC
OSCP                 PF00213.13   172 sp|P37811|ATPD_BACSU -            181   6.4e-49  166.1   2.4   1   1   9.6e-53   7.1e-49  165.9   2.4     1   172     6   176     6   176 0.99 ATP synthase delta (OSCP) subunit
DUF4284              PF14112.1    122 sp|P37811|ATPD_BACSU -            181      0.12   12.8   0.1   1   1   2.4e-05      0.17   12.3   0.1    37   104    21    87    18   104 0.83 Domain of unknown function (DUF4284)
ATP-synt_DE_N        PF02823.11    80 sp|P37812|ATPE_BACSU -            132   1.8e-29  101.3   0.2   1   1   7.4e-33   2.2e-29  101.0   0.2     2    80     5    82     4    82 0.98 ATP synthase, Delta/Epsilon chain, beta-sandwich domain
ATP-synt_DE          PF00401.15    48 sp|P37812|ATPE_BACSU -            132   1.8e-14   53.2   9.2   1   1   1.1e-17   3.3e-14   52.4   9.2     2    46    87   131    86   132 0.96 ATP synthase, Delta/Epsilon chain, long alpha-helix domain
DUF2642              PF10842.3     66 sp|P37812|ATPE_BACSU -            132     0.059   12.8   0.0   1   1   4.7e-05      0.14   11.6   0.0    31    50    61    80    57    85 0.81 Protein of unknown function (DUF2642)
Fucose_iso_C         PF02952.12   142 sp|P37812|ATPE_BACSU -            132      0.12   11.9   0.0   1   1   5.2e-05      0.15   11.5   0.0    46    89    41    82    35   107 0.90 L-fucose isomerase, C-terminal domain
DUF2016              PF09436.5     73 sp|P37812|ATPE_BACSU -            132      0.12   11.9   0.0   1   1   6.5e-05      0.19   11.2   0.0     5    55    35    84    33    89 0.85 Domain of unknown function (DUF2016)
ATP-synt_B           PF00430.13   132 sp|P37814|ATPF_BACSU -            170   5.2e-33  113.6  23.1   1   1   3.9e-36   8.3e-33  113.0  23.1     3   132    18   147    17   147 0.98 ATP synthase B/B' CF(0)
Ycf1                 PF05758.7    929 sp|P37814|ATPF_BACSU -            170      0.23    9.1   6.4   1   1   0.00013      0.27    8.8   6.4   203   302    20   125    12   163 0.43 Ycf1
ATP-synt             PF00231.14   290 sp|P37810|ATPG_BACSU -            287  5.5e-109  364.0   3.3   1   1  8.2e-113  6.1e-109  363.8   3.3     1   290     2   286     2   286 0.99 ATP synthase
EIIA-man             PF03610.11   116 sp|P37810|ATPG_BACSU -            287     0.065   13.3   0.1   2   2   5.8e-05      0.43   10.6   0.0    40    87   168   214   149   240 0.81 PTS system fructose IIA component
ATP-synt_C           PF00137.16    66 sp|P37815|ATPL_BACSU -             70   1.8e-20   72.5  13.3   1   1   3.9e-24   1.9e-20   72.4  13.3     1    65     1    69     1    70 0.97 ATP synthase subunit C
DUF1634              PF07843.6    105 sp|P37815|ATPL_BACSU -             70      0.09   12.4   4.7   1   1   2.3e-05      0.12   12.0   4.7    12    81     6    69     1    70 0.69 Protein of unknown function (DUF1634)
SKG6                 PF08693.5     40 sp|P37815|ATPL_BACSU -             70      0.35   10.2  13.2   1   2     2e-05     0.098   11.9   2.9    13    34     4    25     3    27 0.94 Transmembrane alpha-helix domain
ATP_synt_I           PF03899.10   100 sp|P37816|ATPZ_BACSU -            127   1.8e-18   66.5   5.1   1   1   1.4e-22   2.1e-18   66.3   5.1     1   100    10   105    10   105 0.97 ATP synthase I chain
AzlC                 PF03591.9    143 sp|O07942|AZLC_BACSU -            254     2e-37  128.3  10.3   1   2   1.3e-41     2e-37  128.3  10.3     1   142    37   177    37   178 0.98 AzlC protein
AzlD                 PF05437.7     99 sp|O07923|AZLD_BACSU -            110   1.6e-26   92.1   6.2   1   1   1.2e-30   1.8e-26   91.9   6.2     2    98     9   105     8   106 0.98 Branched-chain amino acid transport protein (AzlD)
Flavodoxin_2         PF02525.12   199 sp|O35022|AZOR1_BACSU -            208   2.5e-44  151.1   0.1   1   1   5.7e-48   2.8e-44  151.0   0.1     2   197     3   203     2   205 0.91 Flavodoxin-like fold
FMN_red              PF03358.10   152 sp|O35022|AZOR1_BACSU -            208   2.8e-09   36.6   0.0   1   1   7.8e-13   3.8e-09   36.2   0.0    11   134    12   162     2   184 0.75 NADPH-dependent FMN reductase
Flavodoxin_4         PF12682.2    156 sp|O35022|AZOR1_BACSU -            208    0.0011   18.3   0.0   1   1   3.1e-07    0.0015   17.8   0.0    35   100    49   116    37   155 0.78 Flavodoxin
Flavodoxin_2         PF02525.12   199 sp|O32224|AZOR2_BACSU -            211   8.4e-45  152.7   0.0   1   1   1.3e-48   9.7e-45  152.5   0.0     2   197     3   206     2   208 0.89 Flavodoxin-like fold
FMN_red              PF03358.10   152 sp|O32224|AZOR2_BACSU -            211   8.5e-10   38.3   0.0   1   1   1.6e-13   1.2e-09   37.8   0.0     2   112     3   136     2   179 0.76 NADPH-dependent FMN reductase
FMN_red              PF03358.10   152 sp|O07529|AZR_BACSU  -            174     4e-34  117.3   0.0   1   1   1.1e-37   5.4e-34  116.8   0.0     1   148     1   137     1   141 0.95 NADPH-dependent FMN reductase
Flavodoxin_2         PF02525.12   199 sp|O07529|AZR_BACSU  -            174   9.3e-09   35.0   0.0   1   1   2.6e-12   1.3e-08   34.6   0.0     1   111     1    96     1   129 0.80 Flavodoxin-like fold
Flavodoxin_5         PF12724.2    143 sp|O07529|AZR_BACSU  -            174    0.0079   16.1   0.1   1   1   6.4e-06     0.032   14.2   0.1    25    86    45   107    12   170 0.81 Flavodoxin domain
adh_short            PF00106.20   167 sp|P39640|BACC_BACSU -            253     8e-34  116.9   1.6   1   1   7.5e-37     1e-33  116.6   1.6     1   166     6   170     6   171 0.91 short chain dehydrogenase
adh_short_C2         PF13561.1    241 sp|P39640|BACC_BACSU -            253   2.6e-27   96.1   0.1   1   1   2.3e-30   3.1e-27   95.8   0.1     6   241    15   251    12   251 0.88 Enoyl-(Acyl carrier protein) reductase
KR                   PF08659.5    181 sp|P39640|BACC_BACSU -            253   7.5e-11   42.0   0.3   1   1   7.6e-14     1e-10   41.5   0.3     2   123     7   122     6   157 0.83 KR domain
Epimerase            PF01370.16   236 sp|P39640|BACC_BACSU -            253   3.8e-05   23.2   0.4   1   1     4e-08   5.4e-05   22.7   0.4     1    78     8    93     8   141 0.73 NAD dependent epimerase/dehydratase family
Polysacc_synt_2      PF02719.10   294 sp|P39640|BACC_BACSU -            253    0.0031   16.4   0.5   1   1   4.1e-06    0.0056   15.6   0.5     1   117     8   124     8   129 0.70 Polysaccharide biosynthesis protein
Eno-Rase_NADH_b      PF12242.3     78 sp|P39640|BACC_BACSU -            253    0.0056   16.4   0.2   1   1   9.6e-06     0.013   15.2   0.2    40    73     6    38     3    43 0.82 NAD(P)H binding domain of trans-2-enoyl-CoA reductase
TrkA_N               PF02254.13   116 sp|P39640|BACC_BACSU -            253    0.0081   16.1   0.3   1   1   1.2e-05     0.016   15.2   0.3     5    58    13    70     8    97 0.84 TrkA-N domain
NAD_binding_7        PF13241.1    103 sp|P39640|BACC_BACSU -            253     0.017   15.4   0.2   1   1   2.5e-05     0.034   14.3   0.2     4    81     2    74     1   101 0.70 Putative NAD(P)-binding
Saccharop_dh         PF03435.13   386 sp|P39640|BACC_BACSU -            253     0.019   13.9   0.3   1   1     2e-05     0.027   13.4   0.3     7    73    15    86     8    98 0.81 Saccharopine dehydrogenase
CmcI                 PF04989.7    206 sp|P39640|BACC_BACSU -            253     0.019   14.2   0.1   1   1   2.3e-05     0.031   13.5   0.1    42   105    11    72     7    79 0.84 Cephalosporin hydroxylase
NAD_binding_10       PF13460.1    183 sp|P39640|BACC_BACSU -            253     0.021   14.8   0.5   1   1   2.8e-05     0.038   13.9   0.5     1    68     8    88     8   185 0.63 NADH(P)-binding
MFS_1                PF07690.11   352 sp|P39642|BACE_BACSU -            394   1.2e-16   60.3  34.0   1   1   1.7e-20   1.2e-16   60.3  34.0     2   351    12   347    11   348 0.78 Major Facilitator Superfamily
PRA1                 PF03208.14   154 sp|P39642|BACE_BACSU -            394    0.0037   16.6   4.8   3   3     5e-07    0.0037   16.6   4.8    45   148   277   386   274   392 0.70 PRA1 family protein
MFS_1                PF07690.11   352 sp|O31762|BBEX_BACSU -            402   2.5e-53  181.0  33.9   1   2   3.1e-43   5.1e-40  137.2  14.7     6   269    12   273     7   280 0.84 Major Facilitator Superfamily
MFS_1                PF07690.11   352 sp|O31762|BBEX_BACSU -            402   2.5e-53  181.0  33.9   2   2   2.7e-17   4.4e-14   51.9  10.1    60   183   276   397   273   401 0.90 Major Facilitator Superfamily
MFS_2                PF13347.1    428 sp|O31762|BBEX_BACSU -            402   2.5e-13   49.2  25.8   1   3   6.6e-11   1.1e-07   30.6   1.6   261   345    38   125    27   135 0.91 MFS/sugar transport protein
MFS_2                PF13347.1    428 sp|O31762|BBEX_BACSU -            402   2.5e-13   49.2  25.8   2   3   1.3e-09   2.2e-06   26.3  12.0   177   383   165   363   139   368 0.75 MFS/sugar transport protein
Sugar_tr             PF00083.19   451 sp|O31762|BBEX_BACSU -            402   9.9e-11   40.8  38.4   1   2   1.6e-12   2.7e-09   36.1  12.3    44   125    35   118    23   187 0.85 Sugar (and other) transporter
Sugar_tr             PF00083.19   451 sp|O31762|BBEX_BACSU -            402   9.9e-11   40.8  38.4   2   2   0.00031       0.5    8.8  18.2    14   190   214   387   213   396 0.82 Sugar (and other) transporter
MFS_3                PF05977.8    524 sp|O31762|BBEX_BACSU -            402   7.6e-09   34.2   9.0   1   2   9.8e-10   1.6e-06   26.5   1.3    39   197    31   191    17   229 0.77 Transmembrane secretion effector
MFS_3                PF05977.8    524 sp|O31762|BBEX_BACSU -            402   7.6e-09   34.2   9.0   2   2     2e-05     0.033   12.3   1.2    85   189   281   387   253   400 0.67 Transmembrane secretion effector
TRI12                PF06609.8    599 sp|O31762|BBEX_BACSU -            402   0.00027   19.2   8.4   1   2   1.7e-07   0.00027   19.2   8.4    78   214    37   180    23   227 0.67 Fungal trichothecene efflux pump (TRI12)
DUF4131              PF13567.1    176 sp|O31762|BBEX_BACSU -            402    0.0018   17.7   0.9   2   4   1.1e-06    0.0018   17.7   0.9     1    60   151   235   151   245 0.69 Domain of unknown function (DUF4131)
OATP                 PF03137.15   539 sp|O31762|BBEX_BACSU -            402    0.0043   15.1  19.2   1   4   0.00017      0.28    9.1   2.1     6    87     5    86     2    96 0.86 Organic Anion Transporter Polypeptide (OATP) family
OATP                 PF03137.15   539 sp|O31762|BBEX_BACSU -            402    0.0043   15.1  19.2   2   4   0.00025       0.4    8.6   0.2   139   204    93   160    87   169 0.79 Organic Anion Transporter Polypeptide (OATP) family
OATP                 PF03137.15   539 sp|O31762|BBEX_BACSU -            402    0.0043   15.1  19.2   3   4   0.00013      0.22    9.5   0.6   289   388   193   293   183   307 0.71 Organic Anion Transporter Polypeptide (OATP) family
UPF0233              PF06781.7     87 sp|O31762|BBEX_BACSU -            402      0.66    9.6   4.8   1   2   0.00035      0.57    9.8   0.1    16    56   194   237   183   255 0.71 Uncharacterised protein family (UPF0233)
Alpha-amylase        PF00128.19   316 sp|O06988|BBMA_BACSU -            588   2.3e-85  286.7   0.5   1   1   8.8e-89   4.4e-85  285.8   0.5     1   316   175   468   175   468 0.91 Alpha amylase, catalytic domain
Alpha-amylase_N      PF02903.9    120 sp|O06988|BBMA_BACSU -            588   9.3e-44  148.2   1.9   1   1   3.1e-47   1.5e-43  147.5   1.1     1   120     1   123     1   123 0.99 Alpha amylase, N-terminal ig-like domain
Glyco_hydro_66       PF13199.1    559 sp|O06988|BBMA_BACSU -            588     0.034   12.5   0.2   1   1   1.1e-05     0.054   11.8   0.2   173   266   228   328   223   349 0.73 Glycosyl hydrolase family 66
ABC_tran             PF00005.22   137 sp|O34697|BCEA_BACSU -            253   2.8e-31  108.6   0.1   1   1   8.9e-34   4.7e-31  107.9   0.1     1   136    23   171    23   172 0.97 ABC transporter
AAA_21               PF13304.1    303 sp|O34697|BCEA_BACSU -            253   3.1e-09   37.1   1.5   1   1   2.3e-09   1.2e-06   28.6   1.5     3   300    37   205    35   207 0.72 AAA domain
AAA_18               PF13238.1    129 sp|O34697|BCEA_BACSU -            253   2.5e-05   24.5   0.1   1   2   6.3e-06    0.0033   17.7   0.0     1    49    36    83    36   109 0.73 AAA domain
AAA_15               PF13175.1    415 sp|O34697|BCEA_BACSU -            253   2.9e-05   23.3   5.3   1   2   0.00055      0.29   10.1   3.3    25    86    29   130     4   150 0.65 AAA ATPase domain
AAA_15               PF13175.1    415 sp|O34697|BCEA_BACSU -            253   2.9e-05   23.3   5.3   2   2   5.4e-05     0.029   13.4   0.0   371   412   161   204   135   205 0.87 AAA ATPase domain
DUF258               PF03193.11   161 sp|O34697|BCEA_BACSU -            253   5.4e-05   22.4   1.2   1   1     2e-07   0.00011   21.4   1.2    19    68    16    66     4   132 0.84 Protein of unknown function, DUF258
AAA_10               PF12846.2    304 sp|O34697|BCEA_BACSU -            253   8.2e-05   22.1   1.0   1   2    0.0018      0.95    8.8   0.5     6    21    38    53    35    66 0.80 AAA-like domain
AAA_10               PF12846.2    304 sp|O34697|BCEA_BACSU -            253   8.2e-05   22.1   1.0   2   2   0.00064      0.34   10.3   0.0   220   263   161   204   151   207 0.92 AAA-like domain
AAA_16               PF13191.1    185 sp|O34697|BCEA_BACSU -            253    0.0001   22.3   0.1   1   1   4.5e-07   0.00024   21.1   0.1    23    81    32    93    17   203 0.64 AAA ATPase domain
AAA_25               PF13481.1    194 sp|O34697|BCEA_BACSU -            253   0.00015   21.2   0.0   1   2   5.2e-05     0.027   13.8   0.0    29    50    29    50    15    77 0.86 AAA domain
AAA_17               PF13207.1    121 sp|O34697|BCEA_BACSU -            253   0.00046   21.0   0.0   1   1   1.5e-06   0.00078   20.2   0.0     2    54    36    94    35   194 0.70 AAA domain
AAA_22               PF13401.1    131 sp|O34697|BCEA_BACSU -            253     0.001   19.1   0.2   1   1   2.7e-05     0.014   15.5   0.2     3    49    32    72    30   216 0.69 AAA domain
AAA_29               PF13555.1     62 sp|O34697|BCEA_BACSU -            253    0.0012   18.3   0.1   1   1   4.1e-06    0.0022   17.5   0.1    17    42    28    52    21    67 0.82 P-loop containing region of AAA domain
Arch_ATPase          PF01637.13   234 sp|O34697|BCEA_BACSU -            253    0.0016   18.1   0.3   1   1   5.7e-06     0.003   17.2   0.3     8    96    23   125    17   211 0.61 Archaeal ATPase
AAA_28               PF13521.1    163 sp|O34697|BCEA_BACSU -            253    0.0026   17.7   0.4   1   2   2.9e-05     0.016   15.2   0.3     2    27    36    66    35    87 0.67 AAA domain
cobW                 PF02492.14   178 sp|O34697|BCEA_BACSU -            253    0.0031   16.9   0.2   1   1   1.3e-05    0.0067   15.8   0.1     3    41    36    75    34    89 0.81 CobW/HypB/UreG, nucleotide-binding domain
SMC_N                PF02463.14   220 sp|O34697|BCEA_BACSU -            253    0.0033   16.6   1.9   1   1   4.2e-05     0.022   13.9   1.9    25   207    34   212    22   223 0.65 RecF/RecN/SMC N terminal domain
MMR_HSR1             PF01926.18   116 sp|O34697|BCEA_BACSU -            253      0.01   15.8   0.5   1   1   6.6e-05     0.035   14.0   0.5     2    29    36    61    35   226 0.75 50S ribosome-binding GTPase
FtsK_SpoIIIE         PF01580.13   205 sp|O34697|BCEA_BACSU -            253     0.012   15.0   0.0   1   2   0.00015      0.08   12.4   0.1    32    58    27    53     5    55 0.79 FtsK/SpoIIIE family
AAA_14               PF13173.1    128 sp|O34697|BCEA_BACSU -            253     0.016   15.1   0.1   1   1   6.1e-05     0.032   14.1   0.1     3    58    34    86    32   136 0.76 AAA domain
T2SE                 PF00437.15   272 sp|O34697|BCEA_BACSU -            253     0.029   13.2   0.2   1   1   9.7e-05     0.051   12.4   0.1   113   150    18    55     5    87 0.81 Type II/IV secretion system protein
AAA_30               PF13604.1    196 sp|O34697|BCEA_BACSU -            253     0.044   13.3   0.0   1   1   0.00049      0.26   10.8   0.0    16    43    31    58    25    82 0.76 AAA domain
PduV-EutP            PF10662.4    143 sp|O34697|BCEA_BACSU -            253     0.055   12.9   0.1   1   1   0.00021      0.11   11.9   0.1     5    36    37    68    34    79 0.82 Ethanolamine utilisation - propanediol utilisation
NB-ARC               PF00931.17   287 sp|O34697|BCEA_BACSU -            253     0.055   12.3   0.5   1   1   0.00022      0.11   11.2   0.2    17    39    31    53    16    64 0.76 NB-ARC domain
Miro                 PF08477.8    119 sp|O34697|BCEA_BACSU -            253      0.07   13.6   0.2   1   1   0.00039      0.21   12.1   0.0     2    36    36    69    36   114 0.67 Miro-like protein
AAA_33               PF13671.1    143 sp|O34697|BCEA_BACSU -            253     0.073   12.9   0.2   1   1   0.00021      0.11   12.3   0.2     3    33    37    71    35   202 0.76 AAA domain
NACHT                PF05729.7    166 sp|O34697|BCEA_BACSU -            253     0.085   12.5   0.1   1   1    0.0004      0.21   11.2   0.0     3    20    36    53    34    62 0.86 NACHT domain
Zeta_toxin           PF06414.7    201 sp|O34697|BCEA_BACSU -            253      0.11   11.5   0.0   1   1   0.00035      0.19   10.8   0.0    19    54    36    72    27    93 0.83 Zeta toxin
ATP_bind_1           PF03029.12   238 sp|O34697|BCEA_BACSU -            253      0.13   11.7   0.5   1   1   0.00054      0.29   10.6   0.1     1    24    38    61    38    74 0.85 Conserved hypothetical ATP binding protein
FtsX                 PF02687.16   121 sp|O34741|BCEB_BACSU -            646     6e-11   42.1  14.3   2   4   8.1e-15     6e-11   42.1  14.3     2   120    59   179    58   180 0.94 FtsX-like permease family
FtsX                 PF02687.16   121 sp|O34741|BCEB_BACSU -            646     6e-11   42.1  14.3   4   4   5.8e-06     0.043   13.5   7.4     3   104   524   634   522   642 0.70 FtsX-like permease family
PufQ                 PF05398.6     73 sp|O34741|BCEB_BACSU -            646       1.5    8.9   5.5   1   2   8.6e-05      0.64   10.0   1.9    12    42     9    40     1    62 0.82 PufQ cytochrome subunit
AhpC-TSA             PF00578.16   124 sp|Q796Y8|BCP_BACSU  -            157   9.1e-43  144.8   0.0   1   1     3e-46   1.1e-42  144.6   0.0     1   122     5   132     5   134 0.98 AhpC/TSA family
Redoxin              PF08534.5    146 sp|Q796Y8|BCP_BACSU  -            157   7.9e-24   83.8   0.0   1   1   2.4e-27     9e-24   83.6   0.0     2   135     5   139     4   151 0.86 Redoxin
Thioredoxin_8        PF13905.1     95 sp|Q796Y8|BCP_BACSU  -            157    0.0033   17.4   0.0   1   1   1.5e-06    0.0056   16.7   0.0     1    80    29   104    28   131 0.74 Thioredoxin-like
AhpC-TSA_2           PF13911.1    115 sp|Q796Y8|BCP_BACSU  -            157    0.0085   16.0   0.0   1   1   4.4e-06     0.016   15.1   0.0     7    83    57   140    51   154 0.70 AhpC/TSA antioxidant enzyme
PAP2                 PF01569.16   129 sp|P94571|BCRC_BACSU -            193     4e-19   68.5  10.9   2   2   1.1e-22     4e-19   68.5  10.9     4   125    55   164    35   168 0.87 PAP2 superfamily
PAP2_3               PF14378.1    191 sp|P94571|BCRC_BACSU -            193   4.1e-05   23.1   1.2   1   1   1.1e-08   4.1e-05   23.1   1.2   126   188    95   155    72   158 0.86 PAP2 superfamily
PAP2_C               PF14360.1     74 sp|P94571|BCRC_BACSU -            193     0.051   13.8   0.5   2   2   1.4e-05     0.051   13.8   0.5    10    68   101   155    96   163 0.69 PAP2 superfamily C-terminal
PgaD                 PF13994.1    138 sp|P94571|BCRC_BACSU -            193     0.098   12.1   1.5   1   1   7.1e-05      0.26   10.7   1.5    15    73    19    74     5    76 0.78 PgaD-like protein
Chal_sti_synt_N      PF00195.14   227 sp|P54157|BCSA_BACSU -            365   1.7e-20   73.2   0.0   1   2   6.1e-23   1.3e-19   70.3   0.0    16   223     2   203     1   207 0.84 Chalcone and stilbene synthases, N-terminal domain
Chal_sti_synt_C      PF02797.10   151 sp|P54157|BCSA_BACSU -            365   2.2e-19   69.8   0.1   1   1   1.6e-22   3.4e-19   69.2   0.1     2   145   221   357   220   360 0.88 Chalcone and stilbene synthases, C-terminal domain
FAE1_CUT1_RppA       PF08392.7    290 sp|P54157|BCSA_BACSU -            365   6.5e-14   51.6   0.0   1   1   4.4e-17   9.3e-14   51.1   0.0    95   268    94   268    59   284 0.87 FAE1/Type III polyketide synthase-like protein
ACP_syn_III_C        PF08541.5     90 sp|P54157|BCSA_BACSU -            365   3.1e-13   49.5   0.0   1   1   3.3e-16     7e-13   48.4   0.0     1    90   269   361   269   361 0.91 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal
ACP_syn_III          PF08545.5     80 sp|P54157|BCSA_BACSU -            365   2.6e-06   27.0   0.1   1   1   2.6e-09   5.4e-06   25.9   0.1     6    64   143   206   140   220 0.81 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III
DUF2100              PF09873.4    215 sp|P54157|BCSA_BACSU -            365     0.051   13.0   0.0   1   1   4.4e-05     0.093   12.1   0.0    62    96     8    43     6    52 0.88 Uncharacterized protein conserved in archaea (DUF2100)
Thioredoxin          PF00085.15   104 sp|P68569|BDBA_BACSU -            137     3e-15   55.7   0.6   1   1   4.1e-18   3.8e-15   55.4   0.6     6   103    35   133    31   134 0.92 Thioredoxin
Thioredoxin_2        PF13098.1    112 sp|P68569|BDBA_BACSU -            137   8.9e-13   48.4   0.6   1   1   1.7e-15   1.6e-12   47.6   0.6     4   111    45   130    40   131 0.88 Thioredoxin-like domain
Thioredoxin_8        PF13905.1     95 sp|P68569|BDBA_BACSU -            137   6.5e-05   22.9   1.8   1   1   2.1e-07   0.00019   21.4   0.7     2    72    47   115    45   131 0.78 Thioredoxin-like
Thioredoxin_3        PF13192.1     76 sp|P68569|BDBA_BACSU -            137   0.00017   21.3   0.1   1   1   2.5e-07   0.00023   20.8   0.1     3    55    51   108    49   131 0.80 Thioredoxin domain
Redoxin              PF08534.5    146 sp|P68569|BDBA_BACSU -            137   0.00047   19.7   0.0   1   1   6.5e-07    0.0006   19.3   0.0    27    93    45   112    24   117 0.75 Redoxin
DUF836               PF05768.9     81 sp|P68569|BDBA_BACSU -            137   0.00059   20.0   0.1   1   1     1e-06   0.00094   19.4   0.1     9    57    57   110    50   134 0.72 Glutaredoxin-like domain (DUF836)
TraF                 PF13728.1    215 sp|P68569|BDBA_BACSU -            137   0.00071   19.1   0.0   1   1     9e-07   0.00083   18.8   0.0   124   191    50   110    29   129 0.86 F plasmid transfer operon protein
Thioredoxin_9        PF14595.1    129 sp|P68569|BDBA_BACSU -            137   0.00075   19.0   0.1   1   1   1.1e-06   0.00098   18.6   0.1    29   107    37   112    27   127 0.83 Thioredoxin
AhpC-TSA             PF00578.16   124 sp|P68569|BDBA_BACSU -            137    0.0014   18.2   0.2   1   1   2.3e-06    0.0021   17.7   0.2    16    83    32   101    24   116 0.76 AhpC/TSA family
Thioredoxin_7        PF13899.1     82 sp|P68569|BDBA_BACSU -            137    0.0036   17.2   0.0   1   1   6.4e-06    0.0059   16.6   0.0    14    80    43   109    34   111 0.76 Thioredoxin-like
Thioredoxin_6        PF13848.1    184 sp|P68569|BDBA_BACSU -            137    0.0068   16.2   3.0   2   2   1.9e-05     0.017   14.9   1.6    15    74    71   134    62   137 0.72 Thioredoxin-like domain
FtsH_ext             PF06480.10   110 sp|P68569|BDBA_BACSU -            137     0.025   14.7   1.2   1   1   5.5e-05     0.051   13.7   1.2     1    56     5    74     4   130 0.66 FtsH Extracellular
SUR7                 PF06687.7    212 sp|P68569|BDBA_BACSU -            137     0.045   13.3   0.2   1   1   6.7e-05     0.062   12.8   0.2     4    44     5    44     3   101 0.78 SUR7/PalI family
DUF2847              PF11009.3    105 sp|P68569|BDBA_BACSU -            137     0.051   13.1   0.1   1   1   7.3e-05     0.068   12.7   0.1    16    90    43   114    32   128 0.87 Protein of unknown function (DUF2847)
Glutaredoxin         PF00462.19    60 sp|P68569|BDBA_BACSU -            137     0.074   13.0   0.4   1   1   0.00013      0.12   12.4   0.4     3    53    51   106    37   113 0.87 Glutaredoxin
tRNA_anti-like       PF12869.2    144 sp|P68569|BDBA_BACSU -            137     0.094   12.1   0.2   1   1   0.00015      0.14   11.6   0.2     4    67     1   111     1   114 0.80 tRNA_anti-like
DsbB                 PF02600.11   156 sp|P68571|BDBB_BACSU -            148   2.1e-27   95.8  12.2   1   1   4.8e-31   3.5e-27   95.0  12.2     4   153     6   132     1   135 0.94 Disulfide bond formation protein DsbB
DsbB                 PF02600.11   156 sp|O32217|BDBC_BACSU -            138   2.7e-30  105.2  12.9   1   1   7.3e-34   5.4e-30  104.2  12.9     2   154     2   132     1   133 0.94 Disulfide bond formation protein DsbB
GP41                 PF00517.12   204 sp|O32217|BDBC_BACSU -            138         2    7.9   5.3   2   2   3.6e-05      0.27   10.7   1.0   147   179   102   134    70   137 0.81 Retroviral envelope protein
Thioredoxin_4        PF13462.1    163 sp|O32218|BDBD_BACSU -            222   1.3e-38  132.6   0.2   1   1     1e-41   1.7e-38  132.2   0.2     4   163    48   217    45   217 0.91 Thioredoxin
Thioredoxin_2        PF13098.1    112 sp|O32218|BDBD_BACSU -            222   1.9e-08   34.4   0.7   1   1   2.5e-11   4.1e-08   33.3   0.7     8   105    60   208    53   215 0.63 Thioredoxin-like domain
DSBA                 PF01323.15   193 sp|O32218|BDBD_BACSU -            222   2.5e-07   30.4   1.3   1   2   0.00023      0.39   10.2   0.4     1    42    60   105    60   117 0.78 DSBA-like thioredoxin domain
DSBA                 PF01323.15   193 sp|O32218|BDBD_BACSU -            222   2.5e-07   30.4   1.3   2   2   1.4e-07   0.00023   20.8   0.0    74   191    93   214    88   216 0.73 DSBA-like thioredoxin domain
Tctex-1              PF03645.8    102 sp|O32218|BDBD_BACSU -            222   0.00054   19.7   0.4   1   1   1.8e-06    0.0029   17.4   0.0    20    85    66   129    55   137 0.88 Tctex-1 family
Thioredoxin_8        PF13905.1     95 sp|O32218|BDBD_BACSU -            222   0.00067   19.7   0.9   1   2   9.6e-05      0.16   12.1   0.1     3    48    59   107    57   144 0.75 Thioredoxin-like
Thioredoxin_3        PF13192.1     76 sp|O32218|BDBD_BACSU -            222    0.0018   18.0   0.4   2   2   4.1e-06    0.0068   16.2   0.2    26    60   167   202   155   216 0.77 Thioredoxin domain
Thioredoxin_5        PF13743.1    176 sp|O32218|BDBD_BACSU -            222     0.019   14.5   0.4   1   1   2.3e-05     0.037   13.5   0.4   105   160   148   204   127   212 0.82 Thioredoxin
Lipoprotein_17       PF04200.7     84 sp|O32218|BDBD_BACSU -            222      0.95    9.6   8.3   1   1   0.00046      0.75    9.9   5.4     3    51   157   205   155   220 0.69 Lipoprotein associated domain
ADH_N                PF08240.7    109 sp|O34788|BDHA_BACSU -            346     5e-28   97.0   0.1   1   1   4.5e-31   9.6e-28   96.1   0.1     1   109    24   139    24   139 0.94 Alcohol dehydrogenase GroES-like domain
ADH_zinc_N           PF00107.21   130 sp|O34788|BDHA_BACSU -            346   1.6e-25   89.1   0.2   1   1   1.1e-28   2.4e-25   88.5   0.2     1   128   179   304   179   306 0.97 Zinc-binding dehydrogenase
TrkA_N               PF02254.13   116 sp|O34788|BDHA_BACSU -            346   0.00069   19.6   0.1   1   1   5.4e-07    0.0011   18.8   0.1     2    53   173   223   172   232 0.81 TrkA-N domain
2-Hacid_dh_C         PF02826.14   178 sp|O34788|BDHA_BACSU -            346     0.014   14.5   0.0   1   1   1.3e-05     0.028   13.5   0.0    35    82   168   216   157   228 0.84 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain
F420_oxidored        PF03807.12    96 sp|O34788|BDHA_BACSU -            346      0.03   14.7   0.1   1   1   4.1e-05     0.087   13.2   0.1     2    60   172   227   171   269 0.85 NADP oxidoreductase coenzyme F420-dependent
ADH_N_assoc          PF13823.1     23 sp|O34788|BDHA_BACSU -            346     0.057   13.0   0.0   1   1   5.8e-05      0.12   12.0   0.0     1    21     1    21     1    23 0.97 Alcohol dehydrogenase GroES-associated
Shikimate_DH         PF01488.15   135 sp|O34788|BDHA_BACSU -            346      0.12   12.4   0.1   1   1   0.00012      0.25   11.4   0.0    10    86   166   247   159   269 0.68 Shikimate / quinate 5-dehydrogenase
Esterase             PF00756.15   251 sp|O32102|BESA_BACSU -            289   1.1e-19   70.8   0.0   1   1   7.6e-23   1.6e-19   70.3   0.0     5   214    33   245    28   265 0.78 Putative esterase
Peptidase_S9         PF00326.16   213 sp|O32102|BESA_BACSU -            289   8.6e-07   28.3   0.0   1   2   2.8e-09   5.9e-06   25.6   0.0    58   102   149   193   143   215 0.89 Prolyl oligopeptidase family
LCAT                 PF02450.10   389 sp|O32102|BESA_BACSU -            289    0.0013   17.7   0.0   1   1   8.6e-07    0.0018   17.3   0.0   105   151   141   185   137   207 0.84 Lecithin:cholesterol acyltransferase
Abhydrolase_1        PF00561.15   230 sp|O32102|BESA_BACSU -            289    0.0013   18.3   0.0   1   1   8.3e-07    0.0018   17.9   0.0    41    79   151   190   131   276 0.78 alpha/beta hydrolase fold
Abhydrolase_6        PF12697.2    228 sp|O32102|BESA_BACSU -            289    0.0061   16.4   0.0   1   1     6e-06     0.013   15.4   0.0    66   103   155   192   123   272 0.73 Alpha/beta hydrolase family
Abhydrolase_5        PF12695.2    145 sp|O32102|BESA_BACSU -            289     0.013   15.2   0.0   1   1   7.5e-06     0.016   14.9   0.0    55   118   148   228    86   264 0.66 Alpha/beta hydrolase family
UxuA                 PF03786.8    351 sp|O32102|BESA_BACSU -            289     0.063   11.8   0.0   1   1   4.3e-05     0.091   11.3   0.0   142   213   205   288   169   289 0.72 D-mannonate dehydratase (UxuA)
Aldedh               PF00171.17   462 sp|P71016|BETB_BACSU -            490  1.3e-184  613.9   0.0   1   1  2.9e-188  1.4e-184  613.7   0.0     1   462    11   476    11   476 0.99 Aldehyde dehydrogenase family
DUF1487              PF07368.6    215 sp|P71016|BETB_BACSU -            490   1.4e-05   24.4   0.3   3   3   3.3e-05      0.17   11.1   0.0   116   169   389   441   379   448 0.88 Protein of unknown function (DUF1487)
LuxC                 PF05893.9    400 sp|P71016|BETB_BACSU -            490   0.00029   19.6   0.0   1   1   9.3e-08   0.00046   19.0   0.0    72   258   124   306   120   333 0.83 Acyl-CoA reductase (LuxC)
Glyco_hydro_42       PF02449.10   374 sp|O31529|BGAL1_BACSU -            663    1e-123  413.1   1.0   1   1  4.2e-127  1.3e-123  412.8   1.0     1   373     9   374     9   375 0.99 Beta-galactosidase
Glyco_hydro_42M      PF08532.5    207 sp|O31529|BGAL1_BACSU -            663   1.5e-46  158.1   0.0   1   1     8e-50   2.4e-46  157.5   0.0     1   206   387   592   387   593 0.98 Beta-galactosidase trimerisation domain
Glyco_hydro_42C      PF08533.5     58 sp|O31529|BGAL1_BACSU -            663   2.1e-12   46.3   0.0   1   1   1.5e-15   4.6e-12   45.2   0.0     1    57   601   658   601   659 0.96 Beta-galactosidase C-terminal domain
Glyco_hydro_14       PF01373.12   402 sp|O31529|BGAL1_BACSU -            663    0.0011   17.7   0.1   2   2   8.6e-07    0.0026   16.5   0.0   183   256   155   232   139   247 0.78 Glycosyl hydrolase family 14
Glyco_hydro_1        PF00232.13   455 sp|O31529|BGAL1_BACSU -            663     0.036   12.2   0.0   1   1   1.9e-05     0.058   11.5   0.0    60   117    20    73    17    75 0.90 Glycosyl hydrolase family 1
Glyco_hydro_42       PF02449.10   374 sp|O07012|BGAL2_BACSU -            672  1.9e-151  504.4   1.6   1   1  7.5e-155  2.8e-151  503.9   1.6     1   373     6   386     6   387 0.99 Beta-galactosidase
Glyco_hydro_42M      PF08532.5    207 sp|O07012|BGAL2_BACSU -            672   6.3e-71  237.8   1.2   1   1   2.6e-74   9.8e-71  237.1   1.2     1   206   397   602   397   603 0.99 Beta-galactosidase trimerisation domain
Glyco_hydro_42C      PF08533.5     58 sp|O07012|BGAL2_BACSU -            672   4.6e-18   64.4   0.1   1   1   2.1e-21   7.9e-18   63.7   0.1     1    57   613   669   613   670 0.98 Beta-galactosidase C-terminal domain
Glyco_hydro_1        PF00232.13   455 sp|P42973|BGLA_BACSU -            479  2.4e-134  447.9   2.9   1   1  3.6e-138  2.7e-134  447.8   2.9     4   454     3   476     1   477 0.92 Glycosyl hydrolase family 1
Cellulase            PF00150.13   281 sp|P42973|BGLA_BACSU -            479    0.0035   16.5   0.2   1   1   8.2e-07    0.0061   15.8   0.2    22   135    68   181    50   215 0.75 Cellulase (glycosyl hydrolase family 5)
Glyco_hydro_1        PF00232.13   455 sp|P42403|BGLC_BACSU -            477  1.4e-190  633.3   1.7   1   1  1.1e-194  1.6e-190  633.1   1.7     3   454     7   474     5   475 0.98 Glycosyl hydrolase family 1
Glyco_hydro_1        PF00232.13   455 sp|P40740|BGLH_BACSU -            469    6e-146  486.2   3.3   1   1  9.3e-150  6.9e-146  486.0   3.3     2   454     5   466     4   467 0.94 Glycosyl hydrolase family 1
Cellulase            PF00150.13   281 sp|P40740|BGLH_BACSU -            469     0.003   16.8   0.1   1   1   7.3e-07    0.0054   15.9   0.1    22   155    67   205    45   208 0.78 Cellulase (glycosyl hydrolase family 5)
Phage_holin          PF04688.8     47 sp|O31984|BHLB_BACSU -             88   1.2e-20   72.7   2.0   2   2   7.8e-25   1.2e-20   72.7   2.0     1    47    29    82    29    82 0.98 Phage lysis protein, holin
BATS                 PF06968.8     93 sp|P53557|BIOB_BACSU -            335   6.3e-26   90.0   0.0   1   1   3.7e-29   1.8e-25   88.5   0.0     1    92   231   320   231   321 0.98 Biotin and Thiamin Synthesis associated domain
Radical_SAM          PF04055.16   166 sp|P53557|BIOB_BACSU -            335   7.7e-18   65.2   0.1   1   1   2.8e-21   1.4e-17   64.3   0.1     6   164    64   220    61   222 0.90 Radical SAM superfamily
His_biosynth         PF00977.16   229 sp|P53557|BIOB_BACSU -            335    0.0073   15.6   0.0   1   1   2.3e-06     0.012   14.9   0.0    59   168   123   234   116   255 0.84 Histidine biosynthesis protein
AAA_26               PF13500.1    199 sp|P53558|BIOD_BACSU -            231   9.1e-50  169.0   0.0   1   1   2.1e-53     1e-49  168.8   0.0     1   199     2   211     2   211 0.94 AAA domain
CbiA                 PF01656.18   195 sp|P53558|BIOD_BACSU -            231   2.4e-11   43.4   0.0   1   1   6.9e-15   3.4e-11   42.9   0.0     2   184     5   202     4   223 0.70 CobQ/CobB/MinD/ParA nucleotide binding domain
Fer4_NifH            PF00142.13   273 sp|P53558|BIOD_BACSU -            231       0.1   11.7   0.0   1   1   2.9e-05      0.14   11.2   0.0   167   223   156   215   113   224 0.73 4Fe-4S iron sulfur cluster binding proteins, NifH/frxC family
Aminotran_1_2        PF00155.16   363 sp|O31777|BIOF1_BACSU -            392   3.8e-66  223.4   0.0   1   1   2.4e-69   4.4e-66  223.2   0.0     2   363    41   382    40   382 0.96 Aminotransferase class I and II
Cys_Met_Meta_PP      PF01053.15   386 sp|O31777|BIOF1_BACSU -            392   4.8e-09   34.9   0.1   1   1   3.9e-12   7.3e-09   34.3   0.1    57   185    87   214    64   217 0.86 Cys/Met metabolism PLP-dependent enzyme
Aminotran_5          PF00266.14   371 sp|O31777|BIOF1_BACSU -            392   6.3e-09   35.0   0.2   1   1     7e-12   1.3e-08   34.0   0.2    14   180    58   211    54   215 0.84 Aminotransferase class-V
SHMT                 PF00464.14   399 sp|O31777|BIOF1_BACSU -            392     0.006   15.0   0.1   1   1   6.7e-06     0.012   13.9   0.1    87   211   101   214    68   219 0.76 Serine hydroxymethyltransferase
DegT_DnrJ_EryC1      PF01041.12   363 sp|O31777|BIOF1_BACSU -            392    0.0097   14.9   0.9   1   1   2.1e-05     0.039   12.9   0.9    26   154    86   214    60   244 0.78 DegT/DnrJ/EryC1/StrS aminotransferase family
OKR_DC_1             PF01276.15   417 sp|O31777|BIOF1_BACSU -            392     0.013   14.0   0.1   1   1   0.00011       0.2   10.1   0.1    87   207   105   210    71   213 0.65 Orn/Lys/Arg decarboxylase, major domain
Beta_elim_lyase      PF01212.16   290 sp|O31777|BIOF1_BACSU -            392     0.014   14.5   0.1   1   1   1.6e-05     0.031   13.4   0.1    31   166    87   208    62   212 0.84 Beta-eliminating lyase
HPHLAWLY             PF14925.1    640 sp|O31777|BIOF1_BACSU -            392     0.067   11.1   0.1   1   1   4.5e-05     0.083   10.8   0.1   334   396   105   167    27   185 0.80 Domain of unknown function
Aminotran_1_2        PF00155.16   363 sp|P53556|BIOF2_BACSU -            389   5.4e-64  216.4   0.0   1   1   2.5e-67   6.2e-64  216.2   0.0     2   362    40   378    39   379 0.94 Aminotransferase class I and II
Cys_Met_Meta_PP      PF01053.15   386 sp|P53556|BIOF2_BACSU -            389     1e-07   30.6   0.0   1   1   5.3e-11   1.3e-07   30.2   0.0    57   185    86   213    62   263 0.88 Cys/Met metabolism PLP-dependent enzyme
Aminotran_5          PF00266.14   371 sp|P53556|BIOF2_BACSU -            389     1e-06   27.8   0.0   1   1   6.5e-10   1.6e-06   27.1   0.0    15   180    58   210    54   213 0.78 Aminotransferase class-V
Beta_elim_lyase      PF01212.16   290 sp|P53556|BIOF2_BACSU -            389   3.5e-05   23.1   0.1   1   1   1.9e-08   4.6e-05   22.7   0.1     3   213    53   254    51   313 0.79 Beta-eliminating lyase
DegT_DnrJ_EryC1      PF01041.12   363 sp|P53556|BIOF2_BACSU -            389     0.001   18.1   0.1   1   1     8e-07     0.002   17.2   0.1    19   153    78   212    60   249 0.73 DegT/DnrJ/EryC1/StrS aminotransferase family
OKR_DC_1             PF01276.15   417 sp|P53556|BIOF2_BACSU -            389     0.088   11.3   0.1   1   1   0.00015      0.36    9.3   0.1   149   207   151   209    96   212 0.79 Orn/Lys/Arg decarboxylase, major domain
p450                 PF00067.17   463 sp|P53554|BIOI_BACSU -            395   2.7e-38  131.6   0.9   1   1   4.5e-39   3.3e-35  121.4   0.9    20   432    14   365     8   367 0.85 Cytochrome P450
DUF3366              PF11846.3    193 sp|P53554|BIOI_BACSU -            395     0.067   13.0   0.1   1   1   1.9e-05      0.14   12.0   0.1    88   141    68   122    46   136 0.81 Domain of unknown function (DUF3366)
Aminotran_3          PF00202.16   339 sp|P53555|BIOK_BACSU -            448  1.8e-107  359.1   0.0   1   1  2.9e-111  2.1e-107  358.8   0.0     2   338    30   379    29   380 0.98 Aminotransferase class-III
Beta_elim_lyase      PF01212.16   290 sp|P53555|BIOK_BACSU -            448     0.019   14.1   0.0   1   1   4.5e-06     0.034   13.3   0.0    34   164    92   251    85   252 0.70 Beta-eliminating lyase
BioW                 PF03744.8    239 sp|P53559|BIOW_BACSU -            259    5e-100  333.8   0.0   1   1  3.8e-104  5.7e-100  333.6   0.0     1   239     8   252     8   252 0.99 6-carboxyhexanoate--CoA ligase
BioY                 PF02632.9    149 sp|O32104|BIOYB_BACSU -            200   3.1e-31  108.0  19.3   1   1   6.2e-35   3.1e-31  108.0  19.3     3   147    36   184    32   186 0.89 BioY family
DUF378               PF04070.7     62 sp|O32104|BIOYB_BACSU -            200    0.0043   16.6   0.7   1   1   8.7e-07    0.0043   16.6   0.7    29    60    49    81    46    83 0.75 Domain of unknown function (DUF378)
Pox_A9               PF04835.7     54 sp|O32104|BIOYB_BACSU -            200      0.32   10.9   7.1   2   2   0.00015      0.73    9.7   0.1    11    46   108   142   106   145 0.87 A9 protein conserved region
BioY                 PF02632.9    149 sp|O07620|BIOY_BACSU -            186   1.2e-42  145.0  16.7   1   1     5e-46   1.9e-42  144.4  16.7     2   148    29   174    28   175 0.97 BioY family
ECF-ribofla_trS      PF07155.7    169 sp|O07620|BIOY_BACSU -            186     0.031   14.0  21.8   1   2   4.1e-05      0.15   11.7   4.3     5    57     5    57     1    69 0.83 ECF-type riboflavin transporter, S component
DPBB_1               PF03330.13    78 sp|O07620|BIOY_BACSU -            186     0.084   12.8   0.1   1   1   4.5e-05      0.17   11.9   0.1    55    69   140   154   138   164 0.86 Rare lipoprotein A (RlpA)-like double-psi beta-barrel
IBV_3C               PF03620.8     93 sp|O07620|BIOY_BACSU -            186      0.16   11.8   1.1   1   1   6.7e-05      0.25   11.2   0.3    20    58   119   157   104   171 0.85 IBV 3C protein
BPL_LplA_LipB        PF03099.14   125 sp|P0CI75|BIRA_BACSU -            325   1.5e-28   99.3   0.1   1   1   2.8e-31   3.4e-28   98.1   0.1     4   125    94   214    88   214 0.93 Biotin/lipoate A/B protein ligase family
HTH_11               PF08279.7     55 sp|P0CI75|BIRA_BACSU -            325   2.1e-16   59.3   0.0   1   1   3.4e-19   4.2e-16   58.3   0.0     3    55     7    60     5    60 0.97 HTH domain
BPL_C                PF02237.12    48 sp|P0CI75|BIRA_BACSU -            325     3e-11   42.7   1.8   1   1   2.7e-14   3.3e-11   42.6   0.3     7    48   285   325   279   325 0.92 Biotin protein ligase C terminal domain
HTH_24               PF13412.1     48 sp|P0CI75|BIRA_BACSU -            325   1.5e-05   24.2   0.0   1   1   2.3e-08   2.8e-05   23.3   0.0     6    46     7    49     2    49 0.85 Winged helix-turn-helix DNA-binding
HTH_36               PF13730.1     55 sp|P0CI75|BIRA_BACSU -            325   0.00098   19.2   0.0   1   1   1.8e-06    0.0023   18.0   0.0    15    54    13    49     9    49 0.86 Helix-turn-helix domain
Rrf2                 PF02082.15    83 sp|P0CI75|BIRA_BACSU -            325    0.0029   17.6   0.0   1   1     6e-06    0.0075   16.3   0.0    14    75     9    69     7    74 0.91 Transcriptional regulator
HTH_23               PF13384.1     50 sp|P0CI75|BIRA_BACSU -            325     0.029   14.0   0.0   1   1   5.1e-05     0.063   12.9   0.0    19    47    22    50     5    55 0.87 Homeodomain-like domain
HTH_Crp_2            PF13545.1     76 sp|P0CI75|BIRA_BACSU -            325     0.039   13.7   0.0   1   2   0.00014      0.18   11.6   0.0    30    57    22    49     9    71 0.78 Crp-like helix-turn-helix domain
HTH_AsnC-type        PF13404.1     42 sp|P0CI75|BIRA_BACSU -            325     0.065   12.7   0.0   1   1   0.00011      0.14   11.7   0.0    19    42    22    45    18    45 0.89 AsnC-type helix-turn-helix domain
Fe_dep_repress       PF01325.14    60 sp|P0CI75|BIRA_BACSU -            325     0.089   12.7   0.0   1   1   0.00017      0.21   11.5   0.0    19    52    17    51    13    59 0.84 Iron dependent repressor, N-terminal DNA binding domain
UBN2                 PF14223.1    119 sp|P0CI75|BIRA_BACSU -            325      0.11   12.2   0.1   1   1   0.00021      0.26   11.0   0.0    40    84   216   261   194   264 0.86 gag-polypeptide of LTR copia-type
Beta-lactamase2      PF13354.1    197 sp|P39824|BLAC_BACSU -            306   2.7e-38  131.3   0.1   1   1   4.4e-42   3.3e-38  131.1   0.1     2   197    72   278    71   278 0.95 Beta-lactamase enzyme family
Beta-lactamase       PF00144.19   330 sp|P39824|BLAC_BACSU -            306   1.1e-30  106.8   0.1   1   1   5.1e-34   3.8e-30  105.0   0.1     2   329    54   298    53   299 0.93 Beta-lactamase
Amidase_2            PF01510.20   132 sp|O31982|BLYA_BACSU -            367   3.5e-19   69.1   0.1   1   1   8.4e-23   6.2e-19   68.3   0.1     8   132    23   159    15   159 0.91 N-acetylmuramoyl-L-alanine amidase
SH3_3                PF08239.6     55 sp|O31982|BLYA_BACSU -            367   1.3e-07   31.7  13.3   2   3   1.6e-07    0.0012   18.9   1.6     1    53   210   268   210   270 0.82 Bacterial SH3 domain
SH3_3                PF08239.6     55 sp|O31982|BLYA_BACSU -            367   1.3e-07   31.7  13.3   3   3   7.5e-08   0.00056   20.0   0.6     7    53   313   363   307   365 0.88 Bacterial SH3 domain
MFS_1                PF07690.11   352 sp|P33449|BMR1_BACSU -            389   3.2e-54  183.9  52.9   1   2   4.8e-54   7.8e-51  172.8  40.8     2   347    12   342    11   342 0.90 Major Facilitator Superfamily
MFS_1                PF07690.11   352 sp|P33449|BMR1_BACSU -            389   3.2e-54  183.9  52.9   2   2   4.7e-09   7.7e-06   24.8   4.1   116   171   325   379   323   388 0.88 Major Facilitator Superfamily
Sugar_tr             PF00083.19   451 sp|P33449|BMR1_BACSU -            389   3.8e-15   55.4  16.0   2   3   2.3e-18   3.8e-15   55.4  16.0    47   189    42   177    34   185 0.94 Sugar (and other) transporter
MFS_3                PF05977.8    524 sp|P33449|BMR1_BACSU -            389   1.7e-10   39.6  19.0   1   2   3.5e-12   5.8e-09   34.6  11.1    36   305    32   293    14   297 0.84 Transmembrane secretion effector
MFS_3                PF05977.8    524 sp|P33449|BMR1_BACSU -            389   1.7e-10   39.6  19.0   2   2   4.5e-05     0.074   11.1   3.0    86   192   281   382   271   388 0.77 Transmembrane secretion effector
MFS_2                PF13347.1    428 sp|P33449|BMR1_BACSU -            389   2.7e-08   32.6  34.4   1   2   9.4e-07    0.0015   16.9  12.8   223   377     4   153     3   157 0.93 MFS/sugar transport protein
MFS_2                PF13347.1    428 sp|P33449|BMR1_BACSU -            389   2.7e-08   32.6  34.4   2   2   5.3e-08   8.8e-05   21.0  14.8   178   345   160   325   130   354 0.75 MFS/sugar transport protein
UNC-93               PF05978.11   157 sp|P33449|BMR1_BACSU -            389    0.0001   21.8   4.6   1   3   6.2e-08    0.0001   21.8   4.6    38   144    43   149    13   159 0.81 Ion channel regulatory protein UNC-93
OATP                 PF03137.15   539 sp|P33449|BMR1_BACSU -            389   0.00039   18.6  25.7   2   4   0.00056      0.93    7.4   3.0   142   205    95   158    89   163 0.88 Organic Anion Transporter Polypeptide (OATP) family
OATP                 PF03137.15   539 sp|P33449|BMR1_BACSU -            389   0.00039   18.6  25.7   4   4   1.3e-05     0.022   12.8   0.7   451   513   294   355   289   358 0.93 Organic Anion Transporter Polypeptide (OATP) family
DUF4131              PF13567.1    176 sp|P33449|BMR1_BACSU -            389      0.41   10.0   0.0   2   3   0.00025      0.41   10.0   0.0    13    77   133   196   123   202 0.79 Domain of unknown function (DUF4131)
DUF4131              PF13567.1    176 sp|P33449|BMR1_BACSU -            389      0.41   10.0   0.0   3   3   0.00013      0.22   10.9   0.5     1    56   149   221   148   236 0.73 Domain of unknown function (DUF4131)
MFS_1_like           PF12832.2     77 sp|P33449|BMR1_BACSU -            389       1.3    8.8  11.9   1   1   1.9e-05     0.031   14.0   2.0     3    76     9    82     7    83 0.89 MFS_1 like family
MFS_1                PF07690.11   352 sp|P39843|BMR2_BACSU -            400   5.8e-65  219.3  61.5   1   2   2.7e-55   4.4e-52  176.9  39.2     2   345    16   350    15   351 0.85 Major Facilitator Superfamily
MFS_1                PF07690.11   352 sp|P39843|BMR2_BACSU -            400   5.8e-65  219.3  61.5   2   2   1.4e-18   2.3e-15   56.1  14.3    25   178   244   394   236   399 0.88 Major Facilitator Superfamily
MFS_2                PF13347.1    428 sp|P39843|BMR2_BACSU -            400   9.1e-13   47.3  36.4   1   2   2.7e-10   4.4e-07   28.6  14.0   226   381    11   161     3   165 0.90 MFS/sugar transport protein
MFS_2                PF13347.1    428 sp|P39843|BMR2_BACSU -            400   9.1e-13   47.3  36.4   2   2     4e-10   6.6e-07   28.0  14.9   137   331   131   321   130   364 0.72 MFS/sugar transport protein
Sugar_tr             PF00083.19   451 sp|P39843|BMR2_BACSU -            400   5.3e-12   45.0  40.7   1   2   6.4e-14   1.1e-10   40.7  34.9    44   343    43   308     1   333 0.76 Sugar (and other) transporter
MFS_3                PF05977.8    524 sp|P39843|BMR2_BACSU -            400    0.0002   19.6  20.6   1   2   8.2e-07    0.0013   16.8   8.1    37   234    37   233     8   242 0.68 Transmembrane secretion effector
MFS_3                PF05977.8    524 sp|P39843|BMR2_BACSU -            400    0.0002   19.6  20.6   2   2   0.00025      0.41    8.7   4.8    48   195   255   395   248   400 0.73 Transmembrane secretion effector
UNC-93               PF05978.11   157 sp|P39843|BMR2_BACSU -            400   0.00045   19.7   6.8   1   2   2.7e-07   0.00045   19.7   6.8    38   142    47   151    18   164 0.85 Ion channel regulatory protein UNC-93
OATP                 PF03137.15   539 sp|P39843|BMR2_BACSU -            400     0.029   12.4  36.0   1   4   3.5e-05     0.058   11.4   6.1     4    87    11    94     8    99 0.87 Organic Anion Transporter Polypeptide (OATP) family
MFS_1_like           PF12832.2     77 sp|P39843|BMR2_BACSU -            400     0.039   13.7  16.5   1   3   3.2e-05     0.053   13.3   4.3     8    76    18    86    11    87 0.88 MFS_1 like family
UPF0182              PF03699.8    774 sp|P39843|BMR2_BACSU -            400     0.052   11.4   7.2   1   1   5.3e-05     0.087   10.7   7.2   155   293   164   308   157   316 0.62 Uncharacterised protein family (UPF0182)
MFS_1                PF07690.11   352 sp|P96712|BMR3_BACSU -            512   3.7e-57  193.6  60.4   1   2   8.3e-60   1.4e-56  191.7  56.5     1   351    18   409    18   410 0.93 Major Facilitator Superfamily
Sugar_tr             PF00083.19   451 sp|P96712|BMR3_BACSU -            512   1.3e-20   73.4  51.2   1   3     5e-19   8.2e-16   57.6  16.2    48   187    49   182    22   190 0.93 Sugar (and other) transporter
Sugar_tr             PF00083.19   451 sp|P96712|BMR3_BACSU -            512   1.3e-20   73.4  51.2   3   3   9.6e-10   1.6e-06   27.0  14.7    35   158   294   413   265   440 0.78 Sugar (and other) transporter
TRI12                PF06609.8    599 sp|P96712|BMR3_BACSU -            512   2.9e-14   52.2  28.7   1   1   2.4e-17   3.9e-14   51.7  28.7    63   424    32   376    14   495 0.77 Fungal trichothecene efflux pump (TRI12)
MFS_3                PF05977.8    524 sp|P96712|BMR3_BACSU -            512   4.5e-05   21.7  17.0   1   2     2e-05     0.033   12.3   3.2    20   189    23   186    11   205 0.80 Transmembrane secretion effector
MFS_3                PF05977.8    524 sp|P96712|BMR3_BACSU -            512   4.5e-05   21.7  17.0   2   2   2.8e-06    0.0046   15.1   5.9   228   370   275   420   264   496 0.84 Transmembrane secretion effector
MFS_2                PF13347.1    428 sp|P96712|BMR3_BACSU -            512   0.00026   19.5  11.8   1   4   1.6e-07   0.00026   19.5  11.8   256   378    43   160    14   171 0.80 MFS/sugar transport protein
MFS_2                PF13347.1    428 sp|P96712|BMR3_BACSU -            512   0.00026   19.5  11.8   4   4   0.00031      0.51    8.6  28.8   154   381   206   416   200   422 0.71 MFS/sugar transport protein
7TMR-DISM_7TM        PF07695.6    205 sp|P96712|BMR3_BACSU -            512    0.0086   15.7   8.1   2   4   5.2e-06    0.0086   15.7   8.1    48   148   151   252   138   259 0.71 7TM diverse intracellular signalling
Virul_fac_BrkB       PF03631.10   260 sp|P96712|BMR3_BACSU -            512     0.019   14.3   0.2   3   3   1.1e-05     0.019   14.3   0.2     7    32   470   495   465   510 0.80 Virulence factor BrkB
ATP1G1_PLM_MAT8      PF02038.11    50 sp|P96712|BMR3_BACSU -            512      0.35    9.9   5.4   1   2   9.2e-05      0.15   11.0   0.2     8    27   223   243   222   248 0.79 ATP1G1/PLM/MAT8 family
TauE                 PF01925.14   240 sp|P96712|BMR3_BACSU -            512       1.8    7.9  52.9   2   4   3.1e-05     0.052   13.0  22.1    51   238   189   369   171   371 0.58 Sulfite exporter TauE/SafE
ABC_membrane         PF00664.18   275 sp|O06967|BMRA_BACSU -            589   7.8e-39  133.7  14.7   1   1   1.3e-41   1.1e-38  133.3  14.7     4   274    32   296    29   297 0.93 ABC transporter transmembrane region
ABC_tran             PF00005.22   137 sp|O06967|BMRA_BACSU -            589   1.1e-34  119.6   0.0   1   1   2.9e-37   2.3e-34  118.6   0.0     1   137   357   507   357   507 0.89 ABC transporter
AAA_21               PF13304.1    303 sp|O06967|BMRA_BACSU -            589   1.7e-08   34.8   0.0   1   1   1.8e-09   1.5e-06   28.4   0.0     1   272   369   511   369   534 0.73 AAA domain
SMC_N                PF02463.14   220 sp|O06967|BMRA_BACSU -            589   6.4e-06   25.5   5.7   1   1     1e-07   8.4e-05   21.9   2.0    97   213   442   551   356   555 0.64 RecF/RecN/SMC N terminal domain
ABC_membrane_2       PF06472.10   282 sp|O06967|BMRA_BACSU -            589   0.00057   19.0   2.3   1   1     7e-07   0.00057   19.0   2.3    28   216    27   209    14   223 0.89 ABC transporter transmembrane region 2
ABC_ATPase           PF09818.4    448 sp|O06967|BMRA_BACSU -            589   0.00089   17.9   0.7   2   2   0.00058      0.48    8.9   0.1   304   351   459   507   443   522 0.88 Predicted ATPase of the ABC class
AAA_29               PF13555.1     62 sp|O06967|BMRA_BACSU -            589    0.0012   18.3   0.3   1   2   2.6e-05     0.021   14.3   0.2    21    40   365   384   357   387 0.87 P-loop containing region of AAA domain
AAA_22               PF13401.1    131 sp|O06967|BMRA_BACSU -            589    0.0021   18.1   0.4   1   1   1.8e-05     0.015   15.4   0.4     4   106   367   522   364   536 0.65 AAA domain
DUF258               PF03193.11   161 sp|O06967|BMRA_BACSU -            589    0.0043   16.2   0.0   1   1   1.1e-05    0.0088   15.2   0.0    25    59   356   391   333   421 0.84 Protein of unknown function, DUF258
AAA_17               PF13207.1    121 sp|O06967|BMRA_BACSU -            589    0.0068   17.2   0.0   1   1     2e-05     0.017   15.9   0.0     3    24   371   404   369   489 0.58 AAA domain
AAA_25               PF13481.1    194 sp|O06967|BMRA_BACSU -            589     0.016   14.6   0.2   1   1   4.8e-05     0.039   13.3   0.2    13    50   344   384   335   536 0.85 AAA domain
SbcCD_C              PF13558.1     90 sp|O06967|BMRA_BACSU -            589     0.022   14.6   1.0   1   1   0.00011     0.095   12.6   0.1    62    88   495   521   466   523 0.81 Putative exonuclease SbcCD, C subunit
AAA_23               PF13476.1    202 sp|O06967|BMRA_BACSU -            589     0.024   14.9   0.2   1   1   7.4e-05     0.061   13.6   0.2    20    37   368   385   355   388 0.87 AAA domain
AAA_16               PF13191.1    185 sp|O06967|BMRA_BACSU -            589     0.032   14.2   0.0   1   1   9.5e-05     0.078   12.9   0.0    24   176   367   527   356   549 0.57 AAA ATPase domain
AAA_18               PF13238.1    129 sp|O06967|BMRA_BACSU -            589     0.064   13.5   0.0   1   1   0.00016      0.14   12.5   0.0     2    23   371   414   371   482 0.68 AAA domain
AAA_28               PF13521.1    163 sp|O06967|BMRA_BACSU -            589     0.089   12.7   0.0   1   1   0.00023      0.19   11.6   0.0     3    40   371   414   369   432 0.76 AAA domain
ABC_membrane_3       PF13748.1    237 sp|O06967|BMRA_BACSU -            589      0.11   11.4  11.9   1   2   0.00034      0.28   10.1   7.9    85   173   114   199    20   271 0.74 ABC transporter transmembrane region
DAGK_cat             PF00781.19   130 sp|P39074|BMRU_BACSU -            297   4.6e-28   97.2   0.1   1   1   1.6e-31   7.8e-28   96.5   0.1     1   128     5   130     5   132 0.90 Diacylglycerol kinase catalytic domain
NAD_kinase           PF01513.16   285 sp|P39074|BMRU_BACSU -            297   1.1e-07   30.9   0.0   1   1     3e-11   1.5e-07   30.5   0.0    62   186    44   187    13   244 0.78 ATP-NAD kinase
DUF3945              PF13101.1     59 sp|P39074|BMRU_BACSU -            297     0.037   13.3   0.0   1   1   1.7e-05     0.086   12.1   0.0     8    28   242   263   242   272 0.85 Protein of unknown function (DUF3945)
Branch_AA_trans      PF05525.8    428 sp|O34545|BRAB_BACSU -            445  4.8e-164  545.9  41.0   1   1  3.7e-168  5.5e-164  545.8  41.0     3   425     8   432     6   435 0.99 Branched-chain amino acid transport protein
Branch_AA_trans      PF05525.8    428 sp|P94499|BRNQ_BACSU -            440    1e-164  548.2  43.8   1   1  1.6e-168  1.2e-164  548.0  43.8     3   426     8   434     6   436 0.98 Branched-chain amino acid transport protein
ASFV_L11L            PF05293.6     78 sp|P94499|BRNQ_BACSU -            440     0.092   12.8   8.9   1   3   3.4e-05      0.26   11.4   0.1    26    55     7    36     2    51 0.82 African swine fever virus (ASFV) L11L protein
GSHPx                PF00255.14   108 sp|P52035|BSAA_BACSU -            160   1.9e-42  143.0   0.6   1   1   4.9e-46   2.4e-42  142.6   0.6     1   107     3   109     3   110 0.99 Glutathione peroxidase
AhpC-TSA             PF00578.16   124 sp|P52035|BSAA_BACSU -            160   1.3e-07   31.3   0.0   1   1   4.1e-11     2e-07   30.7   0.0     9   122     7   138     3   140 0.82 AhpC/TSA family
Redoxin              PF08534.5    146 sp|P52035|BSAA_BACSU -            160   0.00049   19.6   0.0   1   1   1.4e-07   0.00071   19.1   0.0    18   140    13   148     8   157 0.84 Redoxin
Peptidase_M28        PF04389.12   179 sp|P25152|BSAP_BACSU -            455   2.5e-40  138.1   0.0   1   1     1e-43   3.8e-40  137.5   0.0     2   178   244   415   243   416 0.87 Peptidase family M28
PA                   PF02225.17   101 sp|P25152|BSAP_BACSU -            455   6.7e-20   70.6   0.1   1   1   3.4e-23   1.3e-19   69.7   0.1    20    99   132   211   118   212 0.90 PA domain
DUF2172              PF09940.4    386 sp|P25152|BSAP_BACSU -            455   1.7e-05   23.3   0.0   1   1     7e-09   2.6e-05   22.7   0.0   144   315   260   440   246   447 0.77 Domain of unknown function (DUF2172)
Nicastrin            PF05450.10   234 sp|P25152|BSAP_BACSU -            455    0.0098   15.1   0.0   1   1   4.9e-06     0.018   14.2   0.0     2    79   244   312   243   325 0.88 Nicastrin
Flavoprotein         PF02441.14   129 sp|P94404|BSDB_BACSU -            204   8.3e-31  106.3   0.2   1   1   7.5e-35   1.1e-30  105.9   0.2     2   128    14   140    13   141 0.94 Flavoprotein
UbiD                 PF01977.11   407 sp|P94405|BSDC_BACSU -            473    2e-123  411.8   0.0   1   1  1.6e-127  2.3e-123  411.6   0.0     1   405    10   418    10   420 0.97 3-octaprenyl-4-hydroxybenzoate carboxy-lyase
Acetate_kinase       PF00871.12   388 sp|P54532|BUK_BACSU  -            363   4.9e-71  239.3   0.6   1   1   7.6e-75   5.6e-71  239.1   0.6     2   384    10   356     9   360 0.95 Acetokinase family
BcrAD_BadFG          PF01869.15   271 sp|P54532|BUK_BACSU  -            363    0.0013   18.0   0.1   2   2   9.9e-07    0.0073   15.6   0.1   187   245   268   326   262   348 0.85 BadF/BadG/BcrA/BcrD ATPase family
adh_short            PF00106.20   167 sp|O32099|BZRD_BACSU -            243   9.3e-22   77.7   0.0   1   1   6.5e-25   1.4e-21   77.1   0.0     3   162     4   161     2   165 0.84 short chain dehydrogenase
adh_short_C2         PF13561.1    241 sp|O32099|BZRD_BACSU -            243   1.7e-11   44.3   0.0   1   1     1e-14   2.1e-11   44.0   0.0     5   188    10   188     8   232 0.81 Enoyl-(Acyl carrier protein) reductase
NAD_binding_10       PF13460.1    183 sp|O32099|BZRD_BACSU -            243   8.4e-08   32.4   0.0   1   1   5.8e-11   1.2e-07   31.8   0.0     3    62     6    61     5   116 0.87 NADH(P)-binding
KR                   PF08659.5    181 sp|O32099|BZRD_BACSU -            243   3.1e-05   23.7   0.0   1   1   2.3e-08   4.8e-05   23.0   0.0     3   161     4   159     3   176 0.89 KR domain
Epimerase            PF01370.16   236 sp|O32099|BZRD_BACSU -            243     0.038   13.4   0.1   1   1   3.6e-05     0.076   12.4   0.1     2    62     5    61     4   108 0.83 NAD dependent epimerase/dehydratase family
RmlD_sub_bind        PF04321.12   287 sp|O32099|BZRD_BACSU -            243     0.042   12.7   0.1   1   1   2.8e-05     0.058   12.2   0.1     4    47     5    48     1   115 0.92 RmlD substrate binding domain
NmrA                 PF05368.8    233 sp|O32099|BZRD_BACSU -            243     0.066   12.4   0.0   1   1   4.6e-05     0.097   11.9   0.0     3    48     6    51     5    84 0.87 NmrA-like family
E1-E2_ATPase         PF00122.15   230 sp|O32219|CADA_BACSU -            702   8.7e-46  155.8   0.2   2   2   3.5e-49   8.7e-46  155.8   0.2     2   229   170   390   169   391 0.97 E1-E2 ATPase
Hydrolase            PF00702.21   215 sp|O32219|CADA_BACSU -            702   9.5e-38  130.7   2.8   1   1   8.7e-41   2.2e-37  129.5   2.8     2   215   396   607   395   607 0.89 haloacid dehalogenase-like hydrolase
HAD                  PF12710.2    192 sp|O32219|CADA_BACSU -            702   4.6e-16   59.5   0.0   1   1   3.3e-19   8.3e-16   58.7   0.0     1   191   398   603   398   604 0.75 haloacid dehalogenase-like hydrolase
HMA                  PF00403.21    62 sp|O32219|CADA_BACSU -            702   3.1e-10   40.0   1.1   1   1   3.6e-13   8.9e-10   38.5   1.1     4    60    10    64     7    68 0.90 Heavy-metal-associated domain
Hydrolase_3          PF08282.7    254 sp|O32219|CADA_BACSU -            702     8e-06   25.6   0.7   1   1   1.5e-08   3.6e-05   23.4   0.7   187   254   573   640   384   640 0.83 haloacid dehalogenase-like hydrolase
Calmodulin_bind      PF07887.6    300 sp|O32219|CADA_BACSU -            702     0.061   12.3   0.1   1   2    0.0001      0.26   10.3   0.0   170   244    46   120    44   129 0.91 Calmodulin binding protein-like
Glyoxalase           PF00903.20   128 sp|P54721|CADE_BACSU -            285   1.8e-25   89.3   0.1   1   2   3.4e-18     1e-14   54.6   0.0     2   127    10   122     9   123 0.93 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily
Glyoxalase           PF00903.20   128 sp|P54721|CADE_BACSU -            285   1.8e-25   89.3   0.1   2   2   1.9e-11   5.7e-08   32.7   0.1     2   104   170   266   169   276 0.86 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily
Glyoxalase_2         PF12681.2    108 sp|P54721|CADE_BACSU -            285   1.1e-18   67.8   0.0   1   2     3e-11   8.8e-08   32.7   0.0     2   107    16   123    15   124 0.74 Glyoxalase-like domain
Glyoxalase_2         PF12681.2    108 sp|P54721|CADE_BACSU -            285   1.1e-18   67.8   0.0   2   2   2.5e-11   7.3e-08   32.9   0.0     1   100   175   275   175   284 0.66 Glyoxalase-like domain
Glyoxalase_4         PF13669.1    109 sp|P54721|CADE_BACSU -            285   3.2e-05   23.8   0.0   3   3   5.8e-05      0.17   11.8   0.0     2    47   172   213   171   272 0.71 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily
CppA_N               PF14506.1    125 sp|P54721|CADE_BACSU -            285   4.2e-05   23.2   0.0   1   2   7.6e-07    0.0023   17.6   0.0    12    65    21    77    13   100 0.80 CppA N-terminal
Glyoxalase_3         PF13468.1    175 sp|P54721|CADE_BACSU -            285     0.078   12.8   0.3   2   2   9.4e-05      0.28   11.0   0.4     3    36   172   217   170   219 0.92 Glyoxalase-like domain
AXE1                 PF05448.7    320 sp|P94388|CAH_BACSU  -            318  2.3e-136  453.5   0.1   1   1  1.9e-139  2.5e-136  453.3   0.1     1   319     1   315     1   316 0.98 Acetyl xylan esterase (AXE1)
Peptidase_S9         PF00326.16   213 sp|P94388|CAH_BACSU  -            318   9.1e-13   47.9   0.0   1   1     1e-15   1.4e-12   47.3   0.0    46   211   155   317   136   318 0.81 Prolyl oligopeptidase family
Abhydrolase_5        PF12695.2    145 sp|P94388|CAH_BACSU  -            318   8.5e-10   38.5   0.0   1   1     1e-12   1.4e-09   37.8   0.0     2   144    85   298    84   299 0.69 Alpha/beta hydrolase family
Peptidase_S15        PF02129.13   272 sp|P94388|CAH_BACSU  -            318   5.4e-05   22.7   0.5   2   2    0.0002      0.28   10.5   0.0   223   258   253   289   234   300 0.84 X-Pro dipeptidyl-peptidase (S15 family)
DLH                  PF01738.13   218 sp|P94388|CAH_BACSU  -            318   0.00013   21.3   0.0   1   1   1.5e-06     0.002   17.4   0.0    83   162   158   275    69   303 0.69 Dienelactone hydrolase family
Abhydrolase_6        PF12697.2    228 sp|P94388|CAH_BACSU  -            318   0.00041   20.2   0.0   1   1   5.9e-07    0.0008   19.3   0.0    52   210   156   293    47   299 0.61 Alpha/beta hydrolase family
FSH1                 PF03959.8    212 sp|P94388|CAH_BACSU  -            318    0.0012   18.3   0.0   1   1   2.3e-06    0.0031   16.9   0.0    61   206   125   305   110   310 0.74 Serine hydrolase (FSH1)
BAAT_C               PF08840.6    213 sp|P94388|CAH_BACSU  -            318     0.007   16.0   0.0   1   1   1.3e-05     0.017   14.8   0.0     9    63   160   214   158   316 0.73 BAAT / Acyl-CoA thioester hydrolase C terminal
Abhydrolase_3        PF07859.8    211 sp|P94388|CAH_BACSU  -            318      0.01   15.4   0.0   1   1   1.8e-05     0.024   14.2   0.0    49   110   154   207   148   256 0.80 alpha/beta hydrolase fold
Abhydrolase_1        PF00561.15   230 sp|P94388|CAH_BACSU  -            318     0.021   14.4   0.3   2   2   0.00027      0.36   10.3   0.0   155   215   237   299   198   312 0.80 alpha/beta hydrolase fold
LIP                  PF03583.9    290 sp|P94388|CAH_BACSU  -            318      0.19   10.8   1.2   1   2    0.0005      0.67    9.0   0.1    52    92   155   194   150   200 0.89 Secretory lipase
PGA_cap              PF09587.5    250 sp|P96738|CAPA_BACSU -            380   7.2e-77  258.1   1.0   1   1   1.3e-80   9.4e-77  257.7   1.0     3   250    62   300    60   300 0.90 Bacterial capsule synthesis protein PGA_cap
ABC2_membrane_3      PF12698.2    344 sp|P96738|CAPA_BACSU -            380     0.052   12.5   3.9   1   1   1.5e-05      0.11   11.5   4.0     8   113    28   148    26   212 0.63 ABC-2 family transporter protein
CPSase_sm_chain      PF00988.17   131 sp|P25993|CARA_BACSU -            364   2.8e-56  188.5   0.0   1   1   1.4e-59   5.3e-56  187.7   0.0     1   129     1   129     1   131 0.98 Carbamoyl-phosphate synthase small chain, CPSase domain
GATase               PF00117.23   192 sp|P25993|CARA_BACSU -            364   1.9e-45  154.6   0.1   1   1   6.7e-49   2.5e-45  154.3   0.1     1   191   173   348   173   349 0.96 Glutamine amidotransferase class-I
Peptidase_C26        PF07722.8    217 sp|P25993|CARA_BACSU -            364   6.8e-08   32.2   1.1   1   1     2e-09   7.3e-06   25.5   1.1   106   217   239   331   222   331 0.80 Peptidase C26
DUF807               PF05660.6    142 sp|P25993|CARA_BACSU -            364     0.079   12.6   0.0   1   1   3.8e-05      0.14   11.8   0.0    32    90   272   334   255   362 0.80 Coxiella burnetii protein of unknown function (DUF807)
CPSase_L_D2          PF02786.12   211 sp|P25994|CARB_BACSU -           1071  1.5e-121  403.3   0.0   1   2   2.1e-81   2.6e-78  262.1   0.0     1   210   128   333   128   334 0.99 Carbamoyl-phosphate synthase L chain, ATP binding domain
CPSase_L_D2          PF02786.12   211 sp|P25994|CARB_BACSU -           1071  1.5e-121  403.3   0.0   2   2   8.5e-44   1.1e-40  139.2   0.0     1   209   666   866   666   868 0.96 Carbamoyl-phosphate synthase L chain, ATP binding domain
CPSase_L_chain       PF00289.17   110 sp|P25994|CARB_BACSU -           1071   1.2e-46  157.2   0.2   1   2   3.2e-25   3.9e-22   78.4   0.0     1   110     6   123     6   123 0.97 Carbamoyl-phosphate synthase L chain, N-terminal domain
CPSase_L_chain       PF00289.17   110 sp|P25994|CARB_BACSU -           1071   1.2e-46  157.2   0.2   2   2   1.7e-24     2e-21   76.1   0.0     2   109   551   660   550   661 0.97 Carbamoyl-phosphate synthase L chain, N-terminal domain
CPSase_L_D3          PF02787.14   123 sp|P25994|CARB_BACSU -           1071   1.3e-42  144.4   0.2   1   1   2.1e-45   2.6e-42  143.4   0.2     1   123   420   540   420   540 0.98 Carbamoyl-phosphate synthetase large chain, oligomerisation domain
ATP-grasp_4          PF13535.1    184 sp|P25994|CARB_BACSU -           1071   4.3e-42  143.9   0.0   1   2     1e-22   1.3e-19   70.6   0.0     2   182   126   306   125   308 0.87 ATP-grasp domain
ATP-grasp_4          PF13535.1    184 sp|P25994|CARB_BACSU -           1071   4.3e-42  143.9   0.0   2   2     1e-22   1.3e-19   70.6   0.0     2   179   664   837   663   840 0.95 ATP-grasp domain
ATPgrasp_Ter         PF15632.1    330 sp|P25994|CARB_BACSU -           1071   2.1e-32  112.2   0.0   1   3   5.9e-10   7.3e-07   28.2   0.0    25   172    43   189    28   218 0.82 ATP-grasp in the biosynthetic pathway with Ter operon
ATPgrasp_Ter         PF15632.1    330 sp|P25994|CARB_BACSU -           1071   2.1e-32  112.2   0.0   2   3   4.9e-08   6.1e-05   21.9   0.0   245   321   266   345   254   353 0.82 ATP-grasp in the biosynthetic pathway with Ter operon
ATPgrasp_Ter         PF15632.1    330 sp|P25994|CARB_BACSU -           1071   2.1e-32  112.2   0.0   3   3   6.1e-19   7.5e-16   57.7   0.0    83   308   643   865   580   881 0.82 ATP-grasp in the biosynthetic pathway with Ter operon
MGS                  PF02142.17    95 sp|P25994|CARB_BACSU -           1071   1.7e-20   72.7   0.2   1   1   3.3e-22   4.1e-19   68.3   0.0     3    95   951  1036   949  1036 0.96 MGS-like domain
Dala_Dala_lig_C      PF07478.8    203 sp|P25994|CARB_BACSU -           1071   1.2e-19   70.5   0.1   1   2   2.7e-09   3.3e-06   26.6   0.0    23   173   153   301   142   313 0.82 D-ala D-ala ligase C-terminus
Dala_Dala_lig_C      PF07478.8    203 sp|P25994|CARB_BACSU -           1071   1.2e-19   70.5   0.1   2   2   1.2e-13   1.5e-10   40.7   0.0    18   173   686   835   678   860 0.82 D-ala D-ala ligase C-terminus
ATP-grasp            PF02222.17   172 sp|P25994|CARB_BACSU -           1071     5e-18   65.0   0.0   1   2   3.7e-11   4.6e-08   32.5   0.0     2   161   137   303   135   311 0.88 ATP-grasp domain
ATP-grasp            PF02222.17   172 sp|P25994|CARB_BACSU -           1071     5e-18   65.0   0.0   2   2   2.1e-10   2.6e-07   30.1   0.0     3   161   676   837   674   840 0.86 ATP-grasp domain
ATP-grasp_3          PF02655.9    161 sp|P25994|CARB_BACSU -           1071   5.5e-18   65.3   0.3   1   2   3.4e-07   0.00042   20.2   0.1     8   158   132   303   126   306 0.74 ATP-grasp domain
ATP-grasp_3          PF02655.9    161 sp|P25994|CARB_BACSU -           1071   5.5e-18   65.3   0.3   2   2   4.5e-14   5.6e-11   42.5   0.1     2   157   665   836   664   840 0.79 ATP-grasp domain
GARS_A               PF01071.14   194 sp|P25994|CARB_BACSU -           1071   1.2e-12   47.8   0.1   1   2   9.4e-06     0.012   15.2   0.0     6   107   132   229   127   282 0.84 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain
GARS_A               PF01071.14   194 sp|P25994|CARB_BACSU -           1071   1.2e-12   47.8   0.1   2   2   3.3e-10   4.1e-07   29.7   0.1    10   188   674   836   668   839 0.85 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain
RimK                 PF08443.6    190 sp|P25994|CARB_BACSU -           1071   3.5e-10   39.6   0.1   1   2   2.4e-07   0.00029   20.3   0.0    17    70   142   194   126   224 0.88 RimK-like ATP-grasp domain
RimK                 PF08443.6    190 sp|P25994|CARB_BACSU -           1071   3.5e-10   39.6   0.1   2   2   1.3e-05     0.016   14.7   0.0     2   185   665   858   664   861 0.68 RimK-like ATP-grasp domain
CPSase_sm_chain      PF00988.17   131 sp|P36838|CARX_BACSU -            353   9.5e-53  177.1   0.0   1   1   3.1e-56   1.5e-52  176.5   0.0     1   130     1   129     1   130 0.98 Carbamoyl-phosphate synthase small chain, CPSase domain
GATase               PF00117.23   192 sp|P36838|CARX_BACSU -            353   4.3e-47  160.0   0.0   1   1   1.4e-50   6.7e-47  159.4   0.0     2   191   166   341   165   342 0.95 Glutamine amidotransferase class-I
Peptidase_C26        PF07722.8    217 sp|P36838|CARX_BACSU -            353   1.3e-06   28.0   2.5   1   1   4.1e-08   0.00021   20.8   2.5   105   217   229   324   224   324 0.66 Peptidase C26
CPSase_L_D2          PF02786.12   211 sp|P18185|CARY_BACSU -           1030    1e-119  397.4   0.0   1   2   7.9e-86   6.9e-83  277.0   0.0     1   210   128   333   128   334 0.99 Carbamoyl-phosphate synthase L chain, ATP binding domain
CPSase_L_D2          PF02786.12   211 sp|P18185|CARY_BACSU -           1030    1e-119  397.4   0.0   2   2   3.6e-37   3.2e-34  118.0   0.0     1   209   670   868   670   870 0.94 Carbamoyl-phosphate synthase L chain, ATP binding domain
CPSase_L_chain       PF00289.17   110 sp|P18185|CARY_BACSU -           1030     6e-48  161.5   0.5   1   2   1.1e-24   9.6e-22   77.1   0.0     2   110     7   123     6   123 0.98 Carbamoyl-phosphate synthase L chain, N-terminal domain
CPSase_L_chain       PF00289.17   110 sp|P18185|CARY_BACSU -           1030     6e-48  161.5   0.5   2   2   3.1e-26   2.7e-23   82.1   0.1     2   109   555   664   554   665 0.95 Carbamoyl-phosphate synthase L chain, N-terminal domain
CPSase_L_D3          PF02787.14   123 sp|P18185|CARY_BACSU -           1030   7.9e-45  151.5   0.1   1   1   1.9e-47   1.7e-44  150.5   0.1     5   123   424   542   420   542 0.98 Carbamoyl-phosphate synthetase large chain, oligomerisation domain
ATP-grasp_4          PF13535.1    184 sp|P18185|CARY_BACSU -           1030   1.5e-39  135.6   0.0   1   2   4.9e-20   4.3e-17   62.4   0.0     4   182   128   306   126   308 0.91 ATP-grasp domain
ATP-grasp_4          PF13535.1    184 sp|P18185|CARY_BACSU -           1030   1.5e-39  135.6   0.0   2   2   2.4e-22   2.1e-19   69.9   0.0     3   179   669   839   667   842 0.91 ATP-grasp domain
ATPgrasp_Ter         PF15632.1    330 sp|P18185|CARY_BACSU -           1030   5.3e-35  120.7   0.0   1   3     3e-06    0.0026   16.5   0.0    39   160    59   178    28   205 0.79 ATP-grasp in the biosynthetic pathway with Ter operon
ATPgrasp_Ter         PF15632.1    330 sp|P18185|CARY_BACSU -           1030   5.3e-35  120.7   0.0   2   3   3.2e-06    0.0028   16.4   0.0   248   320   269   344   253   353 0.79 ATP-grasp in the biosynthetic pathway with Ter operon
ATPgrasp_Ter         PF15632.1    330 sp|P18185|CARY_BACSU -           1030   5.3e-35  120.7   0.0   3   3   1.8e-26   1.6e-23   82.9   0.0    39   311   607   870   584   889 0.87 ATP-grasp in the biosynthetic pathway with Ter operon
ATP-grasp            PF02222.17   172 sp|P18185|CARY_BACSU -           1030   7.7e-19   67.6   0.0   1   2   1.8e-11   1.6e-08   34.1   0.0     2   161   137   303   135   311 0.90 ATP-grasp domain
ATP-grasp            PF02222.17   172 sp|P18185|CARY_BACSU -           1030   7.7e-19   67.6   0.0   2   2   1.7e-10   1.4e-07   30.9   0.0     2   161   679   839   678   842 0.83 ATP-grasp domain
ATP-grasp_3          PF02655.9    161 sp|P18185|CARY_BACSU -           1030     2e-18   66.8   0.1   1   2   1.1e-06   0.00097   19.0   0.0    11   158   135   303   127   306 0.72 ATP-grasp domain
ATP-grasp_3          PF02655.9    161 sp|P18185|CARY_BACSU -           1030     2e-18   66.8   0.1   2   2   8.7e-15   7.6e-12   45.3   0.0     7   158   674   839   668   842 0.79 ATP-grasp domain
Dala_Dala_lig_C      PF07478.8    203 sp|P18185|CARY_BACSU -           1030   3.8e-17   62.3   0.1   1   2   2.7e-07   0.00024   20.5   0.0    23   173   153   301   136   304 0.82 D-ala D-ala ligase C-terminus
Dala_Dala_lig_C      PF07478.8    203 sp|P18185|CARY_BACSU -           1030   3.8e-17   62.3   0.1   2   2   1.1e-12   9.7e-10   38.1   0.0    22   173   694   837   677   854 0.84 D-ala D-ala ligase C-terminus
RimK                 PF08443.6    190 sp|P18185|CARY_BACSU -           1030   6.3e-12   45.3   0.0   1   3   4.1e-05     0.035   13.5   0.0     2    70   129   194   128   223 0.85 RimK-like ATP-grasp domain
RimK                 PF08443.6    190 sp|P18185|CARY_BACSU -           1030   6.3e-12   45.3   0.0   3   3   4.9e-09   4.3e-06   26.3   0.0     8   169   675   839   669   862 0.80 RimK-like ATP-grasp domain
GARS_A               PF01071.14   194 sp|P18185|CARY_BACSU -           1030   2.3e-10   40.3   0.0   1   2   1.3e-05     0.011   15.2   0.0     7   109   133   231   128   276 0.78 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain
GARS_A               PF01071.14   194 sp|P18185|CARY_BACSU -           1030   2.3e-10   40.3   0.0   2   2     9e-08   7.9e-05   22.3   0.0     8   188   676   838   671   841 0.87 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain
ATP-grasp_5          PF13549.1    222 sp|P18185|CARY_BACSU -           1030   7.7e-05   22.0   0.1   2   2   0.00012      0.11   11.7   0.0    13    51   672   710   665   713 0.92 ATP-grasp domain
STAS                 PF01740.16   117 sp|P18185|CARY_BACSU -           1030     0.012   15.0   0.0   1   1   7.5e-05     0.065   12.6   0.0    67   104   918   955   915   964 0.89 STAS domain
AsiA                 PF09010.5     91 sp|P18185|CARY_BACSU -           1030     0.069   13.0   0.1   1   1   0.00046       0.4   10.5   0.0    21    48   662   689   649   696 0.87 Anti-Sigma Factor A
Catalase             PF00199.14   384 sp|P26901|CATA_BACSU -            483  3.5e-195  648.1   1.2   1   2  5.4e-199    4e-195  647.9   0.7     1   383     7   390     7   391 0.99 Catalase
Catalase-rel         PF06628.7     68 sp|P26901|CATA_BACSU -            483   3.4e-27   94.1   0.0   1   1   9.6e-31   7.1e-27   93.0   0.0     4    68   411   476   408   476 0.95 Catalase-related immune-responsive
DoxX                 PF07681.7     85 sp|P54720|CATD_BACSU -            134   2.7e-20   72.5  13.4   1   1   1.3e-23     4e-20   72.0  13.4     2    84     9    87     8    88 0.97 DoxX
DoxX_2               PF13564.1    103 sp|P54720|CATD_BACSU -            134   1.1e-05   25.2   8.6   1   1   4.6e-09   1.4e-05   25.0   8.6     3    81    13    86    11   110 0.88 DoxX-like family
DoxD                 PF04173.8    167 sp|P54720|CATD_BACSU -            134   4.4e-05   23.2   1.7   2   2   1.5e-08   4.4e-05   23.2   1.7    70   150    50   129    43   134 0.71 TQO small subunit DoxD
Catalase             PF00199.14   384 sp|P42234|CATE_BACSU -            686  3.4e-175  582.3   2.2   1   1  1.1e-178  4.2e-175  581.9   2.2     1   383    31   418    31   419 0.99 Catalase
Catalase-rel         PF06628.7     68 sp|P42234|CATE_BACSU -            686   3.5e-25   87.6   0.1   1   1     2e-28   7.4e-25   86.6   0.1     1    68   443   511   443   511 0.98 Catalase-related immune-responsive
DJ-1_PfpI            PF01965.19   147 sp|P42234|CATE_BACSU -            686   1.2e-05   24.7   0.0   1   1   8.4e-09   3.1e-05   23.4   0.0     2    85   571   645   570   677 0.83 DJ-1/PfpI family
CAF1                 PF04857.15   262 sp|P42234|CATE_BACSU -            686     0.067   12.5   0.1   1   1   3.3e-05      0.12   11.6   0.1    82   142   464   531   426   582 0.80 CAF1 family ribonuclease
Catalase             PF00199.14   384 sp|P94377|CATX_BACSU -            547  1.3e-168  560.6   0.6   1   1  3.2e-172  1.6e-168  560.3   0.6     1   381    36   426    36   429 0.97 Catalase
Catalase-rel         PF06628.7     68 sp|P94377|CATX_BACSU -            547   8.4e-22   76.8   0.0   1   1   4.4e-25   2.2e-21   75.5   0.0     1    68   448   514   448   514 0.96 Catalase-related immune-responsive
Glyco_hydro_4C       PF11975.3    232 sp|P94377|CATX_BACSU -            547     0.054   13.2   0.2   1   1   2.3e-05      0.11   12.2   0.2    16   112   428   522   425   545 0.84 Family 4 glycosyl hydrolase C-terminal domain
Aminotran_1_2        PF00155.16   363 sp|Q08432|CBL_BACSU  -            387   3.7e-40  138.0   0.0   1   1   9.1e-44   4.5e-40  137.7   0.0    19   363    41   382    33   382 0.92 Aminotransferase class I and II
Cys_Met_Meta_PP      PF01053.15   386 sp|Q08432|CBL_BACSU  -            387     0.018   13.3   0.0   1   1     5e-06     0.025   12.8   0.0    74   178    88   200    48   208 0.80 Cys/Met metabolism PLP-dependent enzyme
Beta_elim_lyase      PF01212.16   290 sp|Q08432|CBL_BACSU  -            387      0.09   11.9   0.0   1   1   2.7e-05      0.13   11.3   0.0    58   164    99   199    83   200 0.80 Beta-eliminating lyase
Peptidase_M32        PF02074.10   494 sp|P50848|CBP1_BACSU -            501  2.2e-270  897.3   6.1   1   1  1.7e-274  2.5e-270  897.2   6.1     1   494     1   495     1   495 1.00 Carboxypeptidase Taq (M32) metallopeptidase
PolyA_pol            PF01743.15   126 sp|P42977|CCA_BACSU  -            397     6e-41  139.5   1.1   1   1   2.5e-44   1.2e-40  138.5   1.1     1   126    22   142    22   142 0.99 Poly A polymerase head domain
tRNA_NucTran2_2      PF13735.1    149 sp|P42977|CCA_BACSU  -            397   2.5e-39  134.4   3.9   1   1   8.3e-43   4.1e-39  133.7   3.9     1   149   243   391   243   391 0.97 tRNA nucleotidyltransferase domain 2 putative
PolyA_pol_RNAbd      PF12627.2     64 sp|P42977|CCA_BACSU  -            397   1.4e-14   53.3   0.2   1   1   6.4e-18   3.2e-14   52.2   0.2     1    58   169   225   169   229 0.96 Probable RNA and SrmB- binding site of polymerase A
DsbD                 PF02683.10   211 sp|P45706|CCDA_BACSU -            235   1.9e-69  233.4  16.5   1   1   6.7e-73   2.5e-69  233.1  16.5     1   210     9   214     9   215 0.97 Cytochrome C biogenesis protein transmembrane region
DsbD_2               PF13386.1    199 sp|P45706|CCDA_BACSU -            235   2.3e-08   34.0  20.5   1   1   1.2e-11   4.5e-08   33.0  20.4     3   198    10   211     8   212 0.75 Cytochrome C biogenesis protein transmembrane region
Claudin_3            PF06653.6    164 sp|P45706|CCDA_BACSU -            235     0.036   13.7   0.8   1   1   9.8e-06     0.036   13.7   0.8    57   110    13    70     6    88 0.79 Tight junction protein, Claudin-like
CRPA                 PF05745.6    150 sp|P45706|CCDA_BACSU -            235      0.63    9.8   4.0   1   1   0.00014      0.51   10.1   2.2    50    90   188   228   166   231 0.89 Chlamydia 15 kDa cysteine-rich outer membrane protein (CRPA)
dCMP_cyt_deam_1      PF00383.17   102 sp|P19079|CDD_BACSU  -            136   7.4e-20   70.5   0.7   1   1   1.8e-23   8.8e-20   70.2   0.7     4   101     3   104     1   105 0.92 Cytidine and deoxycytidylate deaminase zinc-binding region
dCMP_cyt_deam_2      PF08211.6    124 sp|P19079|CDD_BACSU  -            136   7.1e-15   55.1   0.4   1   2     7e-18   3.5e-14   52.8   0.2    33   101     3    72     1    77 0.90 Cytidine and deoxycytidylate deaminase zinc-binding region
LmjF365940-deam      PF14421.1    193 sp|P19079|CDD_BACSU  -            136    0.0011   18.3   2.7   1   2   0.00014      0.71    9.2   0.1    57    88    34    65    22    78 0.82 A distinct subfamily of CDD/CDA-like deaminases
LmjF365940-deam      PF14421.1    193 sp|P19079|CDD_BACSU  -            136    0.0011   18.3   2.7   2   2   6.3e-05      0.31   10.4   0.3   147   167    76    96    65   119 0.78 A distinct subfamily of CDD/CDA-like deaminases
CDO_I                PF05995.7    175 sp|O32085|CDOA_BACSU -            161   6.3e-46  155.7   0.0   1   1   1.5e-49   7.6e-46  155.4   0.0     1   175     1   154     1   154 0.98 Cysteine dioxygenase type I
Cupin_2              PF07883.6     71 sp|O32085|CDOA_BACSU -            161   1.7e-05   24.2   0.0   1   1   6.6e-09   3.3e-05   23.3   0.0     3    71    64   141    62   141 0.86 Cupin domain
DUF1637              PF07847.7    200 sp|O32085|CDOA_BACSU -            161    0.0051   16.1   0.0   1   1   9.9e-06     0.049   12.9   0.0    28    84    43    99    15   154 0.72 Protein of unknown function (DUF1637)
CTP_transf_1         PF01148.15   259 sp|O31752|CDSA_BACSU -            269   1.3e-68  231.5  23.4   1   1   1.9e-72   1.4e-68  231.3  23.4     1   259     5   268     5   268 0.92 Cytidylyltransferase family
MtrF                 PF09472.5     64 sp|O31752|CDSA_BACSU -            269      0.18   11.0   0.1   2   2   2.4e-05      0.18   11.0   0.1    39    61   174   196   167   199 0.90 Tetrahydromethanopterin S-methyltransferase, F subunit (MtrF)
Sugar-bind           PF04198.8    255 sp|O32253|CGGR_BACSU -            340     9e-78  260.6   0.3   1   1   4.3e-81   1.1e-77  260.4   0.3     3   255    91   338    89   338 0.98 Putative sugar-binding domain
HTH_45               PF14947.1     77 sp|O32253|CGGR_BACSU -            340    0.0037   17.0   0.1   1   1   3.6e-06    0.0088   15.8   0.1     9    72    23    87    20    91 0.87 Winged helix-turn-helix
HTH_11               PF08279.7     55 sp|O32253|CGGR_BACSU -            340     0.039   13.5   0.1   1   1   4.4e-05      0.11   12.1   0.1     2    47    22    67    21    78 0.87 HTH domain
HTH_12               PF08461.5     66 sp|O32253|CGGR_BACSU -            340     0.046   13.4   0.2   1   1   5.1e-05      0.13   12.0   0.2     3    66    25    81    23    81 0.82 Ribonuclease R winged-helix domain
TIR_2                PF13676.1    102 sp|O32253|CGGR_BACSU -            340      0.13   12.3   0.0   1   1   0.00017      0.42   10.7   0.0    40    85    98   148    70   163 0.71 TIR domain
Cpn10                PF00166.16    93 sp|P28599|CH10_BACSU -             94     2e-35  120.5   0.5   1   1   2.9e-39   2.2e-35  120.4   0.5     2    93     2    93     1    93 0.99 Chaperonin 10 Kd subunit
Peptidase_M23        PF01551.17    96 sp|P28599|CH10_BACSU -             94     0.095   12.7   0.0   1   1   1.6e-05      0.12   12.4   0.0    11    53    34    80    20    91 0.77 Peptidase family M23
Cpn60_TCP1           PF00118.19   485 sp|P28598|CH60_BACSU -            544  2.4e-131  438.6  14.0   1   1  5.6e-135  2.8e-131  438.5  14.0     1   485    22   522    22   522 0.94 TCP-1/cpn60 chaperonin family
Cob_adeno_trans      PF01923.13   163 sp|P28598|CH60_BACSU -            544     0.051   13.3   0.2   1   1   2.2e-05      0.11   12.2   0.2    19    92   323   394   313   422 0.68 Cobalamin adenosyltransferase
Na_Ca_ex             PF01699.19   140 sp|O34840|CHAA_BACSU -            351   7.2e-44  148.7  41.7   2   3   7.1e-27   5.3e-23   81.1  12.3     2   139    36   176    35   177 0.98 Sodium/calcium exchanger protein
Na_Ca_ex             PF01699.19   140 sp|O34840|CHAA_BACSU -            351   7.2e-44  148.7  41.7   3   3     9e-26   6.7e-22   77.6  14.9     1   138   215   346   215   348 0.94 Sodium/calcium exchanger protein
PAP2                 PF01569.16   129 sp|O34840|CHAA_BACSU -            351       0.2   11.3  14.3   1   3   8.9e-06     0.066   12.8   2.4    82   121     4    43     1    49 0.91 PAP2 superfamily
CheC                 PF04509.7     38 sp|P40403|CHEC_BACSU -            209   5.1e-29   99.7   0.0   1   2   4.5e-17   2.2e-13   49.6   0.0     1    36    10    45    10    47 0.94 CheC-like family
CheC                 PF04509.7     38 sp|P40403|CHEC_BACSU -            209   5.1e-29   99.7   0.0   2   2   1.7e-16   8.4e-13   47.8   0.0     1    37   111   147   111   148 0.97 CheC-like family
CheX                 PF13690.1     94 sp|P40403|CHEC_BACSU -            209     2e-07   30.7   0.1   2   2   3.2e-08   0.00016   21.4   0.0     5    72    69   146    65   156 0.78 Chemotaxis phosphatase CheX
CheD                 PF03975.8    114 sp|P40404|CHED_BACSU -            166   1.3e-32  111.8   0.0   1   1   1.1e-36   1.7e-32  111.5   0.0     1   113    52   165    52   166 0.98 CheD chemotactic sensory transduction
Glyco_hydro_46       PF01374.13   215 sp|O07921|CHIS_BACSU -            277     4e-83  278.2   3.1   1   1   3.2e-87   4.8e-83  277.9   3.1     2   215    48   261    47   261 0.98 Glycosyl hydrolase family 46
LrgA                 PF03788.9     96 sp|P39591|CIDA_BACSU -            128   1.8e-28   98.0  10.1   1   1   2.4e-32   1.8e-28   98.0  10.1     4    96    20   112    17   112 0.97 LrgA family
zf-LITAF-like        PF10601.4     73 sp|P39591|CIDA_BACSU -            128       0.6   10.0   0.1   4   4   8.1e-05       0.6   10.0   0.1    21    62    84   125    76   126 0.88 LITAF-like zinc ribbon domain
2HCT                 PF03390.10   414 sp|P94363|CIMH_BACSU -            450  9.5e-156  518.3  30.7   1   1  1.5e-159  1.1e-155  518.1  30.7     1   414    32   445    32   445 0.99 2-hydroxycarboxylate transporter family
CinA                 PF02464.12   155 sp|P46323|CINA_BACSU -            416   2.9e-52  176.2   0.1   1   1   8.9e-56   4.4e-52  175.6   0.1     2   155   261   413   260   413 0.98 Competence-damaged protein
MoCF_biosynth        PF00994.19   144 sp|P46323|CINA_BACSU -            416   4.7e-35  120.1   0.0   1   1   1.5e-38   7.6e-35  119.4   0.0     1   143     8   173     8   174 0.94 Probable molybdopterin binding domain
She2p                PF11435.3    205 sp|P46323|CINA_BACSU -            416      0.17   11.2   0.3   1   2   9.9e-05      0.49    9.7   0.0   100   129    79   108    76   113 0.92 RNA binding protein She2p
Resolvase            PF00239.16   141 sp|P17867|CISA_BACSU -            500     3e-34  117.8   4.3   1   2   2.5e-37   4.2e-34  117.4   0.1     1   140     2   145     2   146 0.94 Resolvase, N terminal domain
Recombinase          PF07508.8    102 sp|P17867|CISA_BACSU -            500   1.2e-13   51.0   0.5   1   1   1.9e-16   3.2e-13   49.7   0.5     1    99   168   282   168   285 0.85 Recombinase
Zn_ribbon_recom      PF13408.1     58 sp|P17867|CISA_BACSU -            500   1.5e-13   50.8   6.4   1   1   2.7e-16   4.5e-13   49.2   6.4     1    57   298   358   298   359 0.87 Recombinase zinc beta ribbon domain
HsbA                 PF12296.3    124 sp|P17867|CISA_BACSU -            500     0.014   15.2   2.6   1   1   1.6e-05     0.027   14.3   2.6     2    77   414   488   413   496 0.89 Hydrophobic surface binding protein A
V_ATPase_I           PF01496.14   759 sp|P17867|CISA_BACSU -            500      0.31    8.8   5.3   1   1   0.00028      0.46    8.2   5.3    68   139   407   477   357   491 0.69 V-type ATPase 116kDa subunit family
Cortex-I_coil        PF09304.5    107 sp|P17867|CISA_BACSU -            500       2.3    8.3  12.7   2   2   0.00029      0.47   10.5   7.8     9    68   374   444   371   459 0.80 Cortexillin I, coiled coil
Snapin_Pallidin      PF14712.1     92 sp|P17867|CISA_BACSU -            500         7    7.0  10.0   1   1   9.1e-05      0.15   12.3   2.1    16    52   415   451   413   466 0.84 Snapin/Pallidin
Citrate_synt         PF00285.16   356 sp|P39120|CISY2_BACSU -            372  4.6e-135  449.9   0.0   1   1  3.5e-139  5.2e-135  449.7   0.0     1   356     6   353     6   353 0.99 Citrate synthase
Citrate_synt         PF00285.16   356 sp|P45858|CISY3_BACSU -            372  2.2e-119  398.3   0.0   1   1  1.7e-123  2.5e-119  398.1   0.0     1   356    10   359    10   359 0.99 Citrate synthase
Citrate_synt         PF00285.16   356 sp|P39119|CISY_BACSU -            366    4e-123  410.6   0.7   1   1  6.1e-127  4.6e-123  410.4   0.7     1   356     5   352     5   352 0.97 Citrate synthase
DUF2379              PF09543.5    122 sp|P39119|CISY_BACSU -            366     0.058   13.3   0.1   1   1   1.4e-05       0.1   12.5   0.1    15    63   246   295   233   322 0.82 Protein of unknown function (DUF2379)
CitMHS               PF03600.11   351 sp|P42308|CITN_BACSU -            426  3.2e-109  364.7  35.6   1   2  6.4e-113  3.2e-109  364.7  35.6     1   351     5   373     5   373 0.99 Citrate transporter
Na_H_antiporter      PF03553.9    303 sp|P42308|CITN_BACSU -            426   1.2e-08   34.4  49.3   1   2   7.6e-10   3.7e-06   26.1  23.5   107   296     6   191     1   197 0.79 Na+/H+ antiporter family
Na_H_antiporter      PF03553.9    303 sp|P42308|CITN_BACSU -            426   1.2e-08   34.4  49.3   2   2     3e-06     0.015   14.3  17.9   122   302   243   422   225   424 0.80 Na+/H+ antiporter family
DUF2592              PF10766.4     41 sp|P42308|CITN_BACSU -            426       2.3    7.6  10.3   1   2   9.5e-05      0.47    9.8   2.0     4    29    23    48    22    50 0.89 Protein of unknown function (DUF2592)
CitMHS               PF03600.11   351 sp|P55069|CITM_BACSU -            433     3e-95  318.7  36.3   1   2     6e-99     3e-95  318.7  36.3     1   351     5   378     5   378 0.99 Citrate transporter
Na_H_antiporter      PF03553.9    303 sp|P55069|CITM_BACSU -            433     2e-07   30.3  45.3   1   2   2.1e-08    0.0001   21.4  26.7   111   294     6   187     1   198 0.77 Na+/H+ antiporter family
Na_H_antiporter      PF03553.9    303 sp|P55069|CITM_BACSU -            433     2e-07   30.3  45.3   2   2   1.8e-06    0.0091   15.0  10.6   113   302   242   427   209   429 0.81 Na+/H+ antiporter family
DUF4229              PF14012.1     69 sp|P55069|CITM_BACSU -            433     0.074   12.9   0.4   4   5   1.5e-05     0.074   12.9   0.4    16    60   237   281   233   287 0.90 Protein of unknown function (DUF4229)
AAA_2                PF07724.9    171 sp|P37571|CLPC_BACSU -            810   1.1e-59  201.1   3.5   2   2   5.3e-60   1.8e-57  193.9   0.0     1   171   536   708   536   708 0.98 AAA domain (Cdc48 subfamily)
Clp_N                PF02861.15    53 sp|P37571|CLPC_BACSU -            810   1.1e-37  127.7   8.3   1   2   7.6e-20   2.6e-17   62.4   2.7     1    53    17    69    17    69 0.99 Clp amino terminal domain
Clp_N                PF02861.15    53 sp|P37571|CLPC_BACSU -            810   1.1e-37  127.7   8.3   2   2   2.1e-21   7.2e-19   67.4   0.3     3    53    93   143    91   143 0.97 Clp amino terminal domain
AAA                  PF00004.24   132 sp|P37571|CLPC_BACSU -            810   4.2e-26   91.7   0.8   1   2     3e-16     1e-13   51.6   0.0     2   112   205   320   204   339 0.80 ATPase family associated with various cellular activities (AAA)
AAA                  PF00004.24   132 sp|P37571|CLPC_BACSU -            810   4.2e-26   91.7   0.8   2   2   1.2e-11     4e-09   36.7   0.0     2   111   542   660   541   669 0.85 ATPase family associated with various cellular activities (AAA)
ClpB_D2-small        PF10431.4     81 sp|P37571|CLPC_BACSU -            810   4.3e-25   87.4   3.4   1   1   2.2e-27   7.4e-25   86.6   1.8     1    80   714   793   714   794 0.98 C-terminal, D2-small domain, of ClpB protein
AAA_5                PF07728.9    139 sp|P37571|CLPC_BACSU -            810   8.1e-20   70.9   0.5   1   2   7.9e-06    0.0026   17.4   0.0     3    75   205   282   203   285 0.69 AAA domain (dynein-related subfamily)
AAA_5                PF07728.9    139 sp|P37571|CLPC_BACSU -            810   8.1e-20   70.9   0.5   2   2   2.9e-15   9.7e-13   48.0   0.0     2   125   541   662   540   677 0.81 AAA domain (dynein-related subfamily)
Sigma54_activat      PF00158.21   168 sp|P37571|CLPC_BACSU -            810   6.5e-13   48.4   0.0   1   2   1.5e-05     0.005   16.3   0.0     1   105   182   284   182   290 0.85 Sigma-54 interaction domain
Sigma54_activat      PF00158.21   168 sp|P37571|CLPC_BACSU -            810   6.5e-13   48.4   0.0   2   2   1.2e-09   4.1e-07   29.6   0.0    23   135   539   649   510   671 0.78 Sigma-54 interaction domain
AAA_16               PF13191.1    185 sp|P37571|CLPC_BACSU -            810   8.1e-12   45.5   9.6   1   3   2.8e-07   9.3e-05   22.4   0.0     2    50   182   227   181   241 0.89 AAA ATPase domain
AAA_16               PF13191.1    185 sp|P37571|CLPC_BACSU -            810   8.1e-12   45.5   9.6   3   3   1.5e-06   0.00052   20.0   0.0     4    63   512   577   509   592 0.77 AAA ATPase domain
IstB_IS21            PF01695.12   178 sp|P37571|CLPC_BACSU -            810   2.9e-09   36.5   0.0   1   2   3.4e-06    0.0012   18.3   0.0    45    76   199   230   184   281 0.78 IstB-like ATP binding protein
IstB_IS21            PF01695.12   178 sp|P37571|CLPC_BACSU -            810   2.9e-09   36.5   0.0   2   2   2.6e-05    0.0088   15.4   0.0    50    79   541   570   538   589 0.78 IstB-like ATP binding protein
AAA_14               PF13173.1    128 sp|P37571|CLPC_BACSU -            810   2.2e-08   34.0   0.1   1   2   0.00039      0.13   12.1   0.0     6    74   205   285   200   346 0.71 AAA domain
AAA_14               PF13173.1    128 sp|P37571|CLPC_BACSU -            810   2.2e-08   34.0   0.1   2   2     1e-05    0.0034   17.2   0.0     6    87   542   637   539   647 0.69 AAA domain
AAA_22               PF13401.1    131 sp|P37571|CLPC_BACSU -            810   6.6e-08   32.7   9.1   1   2   2.1e-05     0.007   16.5   0.1     6   100   203   285   198   312 0.69 AAA domain
AAA_22               PF13401.1    131 sp|P37571|CLPC_BACSU -            810   6.6e-08   32.7   9.1   2   2   9.5e-05     0.032   14.3   0.0     5   110   539   632   535   657 0.70 AAA domain
UVR                  PF02151.14    36 sp|P37571|CLPC_BACSU -            810   1.3e-07   30.8   7.3   1   1   1.3e-09   4.3e-07   29.2   7.3     1    36   417   452   417   452 0.96 UvrB/uvrC motif
AAA_17               PF13207.1    121 sp|P37571|CLPC_BACSU -            810   1.9e-07   31.9   3.4   1   2     0.001      0.34   11.7   0.3     4    64   206   268   205   454 0.74 AAA domain
AAA_17               PF13207.1    121 sp|P37571|CLPC_BACSU -            810   1.9e-07   31.9   3.4   2   2     1e-05    0.0034   18.1   0.2     5    35   544   585   541   787 0.79 AAA domain
Zeta_toxin           PF06414.7    201 sp|P37571|CLPC_BACSU -            810   5.9e-07   28.7   1.9   2   2   1.7e-06   0.00059   18.9   0.0    19    62   541   595   522   634 0.73 Zeta toxin
Mg_chelatase         PF01078.16   207 sp|P37571|CLPC_BACSU -            810   8.5e-07   28.3   0.3   1   2    0.0012       0.4    9.8   0.0    11    62   189   241   178   259 0.73 Magnesium chelatase, subunit ChlI
Mg_chelatase         PF01078.16   207 sp|P37571|CLPC_BACSU -            810   8.5e-07   28.3   0.3   2   2    0.0008      0.27   10.3   0.1    25   159   541   661   509   718 0.65 Magnesium chelatase, subunit ChlI
DNA_pol3_delta2      PF13177.1    162 sp|P37571|CLPC_BACSU -            810   1.6e-06   27.8   0.0   2   2   2.9e-07   9.7e-05   22.0   0.0    21   128   540   636   533   638 0.85 DNA polymerase III, delta subunit
AAA_18               PF13238.1    129 sp|P37571|CLPC_BACSU -            810   8.8e-06   26.0   9.9   1   2   7.6e-05     0.026   14.8   0.0     3    68   206   273   205   290 0.74 AAA domain
AAA_18               PF13238.1    129 sp|P37571|CLPC_BACSU -            810   8.8e-06   26.0   9.9   2   2   4.6e-05     0.015   15.5   0.0     3    31   543   574   542   618 0.80 AAA domain
RNA_helicase         PF00910.17   107 sp|P37571|CLPC_BACSU -            810   4.3e-05   23.6   0.0   1   2    0.0022      0.74   10.0   0.0     3    25   206   228   205   260 0.82 RNA helicase
RNA_helicase         PF00910.17   107 sp|P37571|CLPC_BACSU -            810   4.3e-05   23.6   0.0   2   2    0.0021      0.72   10.0   0.0     2    24   542   564   541   586 0.82 RNA helicase
AAA_3                PF07726.6    131 sp|P37571|CLPC_BACSU -            810   4.9e-05   22.9   0.0   2   2   0.00018     0.059   12.9   0.0     7   108   546   657   541   664 0.67 ATPase family associated with various cellular activities (AAA)
RuvB_N               PF05496.7    234 sp|P37571|CLPC_BACSU -            810     5e-05   22.4   2.0   2   3    0.0026      0.87    8.5   0.0    26    74   510   562   489   582 0.73 Holliday junction DNA helicase ruvB N-terminus
OmpH                 PF03938.9    158 sp|P37571|CLPC_BACSU -            810   6.9e-05   22.8   0.3   2   2   2.1e-05    0.0071   16.2   0.0    16   114   236   471   210   522 0.82 Outer membrane protein (OmpH-like)
Arch_ATPase          PF01637.13   234 sp|P37571|CLPC_BACSU -            810   0.00011   21.9  10.5   1   2   8.2e-05     0.028   14.1   0.2     3    44   184   225   182   379 0.79 Archaeal ATPase
Sigma54_activ_2      PF14532.1    138 sp|P37571|CLPC_BACSU -            810   0.00023   21.2   0.0   1   2   0.00024     0.081   12.9   0.0     2    64   184   244   183   270 0.79 Sigma-54 interaction domain
MMR_HSR1             PF01926.18   116 sp|P37571|CLPC_BACSU -            810   0.00023   21.0   0.2   1   2    0.0027      0.91    9.4   0.0     3    88   205   279   203   308 0.77 50S ribosome-binding GTPase
AAA_28               PF13521.1    163 sp|P37571|CLPC_BACSU -            810   0.00025   21.0   2.6   2   2    0.0018      0.62   10.0   0.0     2    22   541   561   540   590 0.80 AAA domain
NACHT                PF05729.7    166 sp|P37571|CLPC_BACSU -            810   0.00031   20.4   0.0   1   2   0.00088       0.3   10.7   0.0     4    30   205   231   203   247 0.89 NACHT domain
AAA_19               PF13245.1     76 sp|P37571|CLPC_BACSU -            810    0.0029   17.3   0.0   1   2    0.0019      0.63    9.8   0.0     9    35   202   225   191   243 0.76 Part of AAA domain
T2SE                 PF00437.15   272 sp|P37571|CLPC_BACSU -            810    0.0075   15.2   0.1   2   2   0.00029     0.097   11.5   0.0   115   172   525   581   365   627 0.72 Type II/IV secretion system protein
Torsin               PF06309.6    127 sp|P37571|CLPC_BACSU -            810     0.012   15.4   0.0   2   2    0.0026      0.87    9.4   0.0    15    80   498   565   489   580 0.83 Torsin
ABC_tran             PF00005.22   137 sp|P37571|CLPC_BACSU -            810     0.014   15.6   3.6   2   2    0.0024      0.79   10.0   0.0    16    51   543   579   539   672 0.82 ABC transporter
NB-ARC               PF00931.17   287 sp|P37571|CLPC_BACSU -            810     0.022   13.6   0.6   1   2    0.0026      0.86    8.3   0.0     2    38   186   220   185   234 0.80 NB-ARC domain
AAA_23               PF13476.1    202 sp|P37571|CLPC_BACSU -            810     0.046   14.0  13.1   1   1    0.0003       0.1   12.9   0.0    20   143   539   716   533   781 0.43 AAA domain
AAA_2                PF07724.9    171 sp|O31673|CLPE_BACSU -            699   4.9e-54  182.8   4.3   2   2   1.1e-54   3.7e-52  176.6   0.1     1   171   437   603   437   603 0.98 AAA domain (Cdc48 subfamily)
AAA                  PF00004.24   132 sp|O31673|CLPE_BACSU -            699   7.5e-25   87.6   0.9   1   2     8e-16   2.7e-13   50.2   0.1     2   127   116   247   115   251 0.85 ATPase family associated with various cellular activities (AAA)
AAA                  PF00004.24   132 sp|O31673|CLPE_BACSU -            699   7.5e-25   87.6   0.9   2   2   4.7e-11   1.6e-08   34.7   0.0     2   110   443   560   442   567 0.82 ATPase family associated with various cellular activities (AAA)
ClpB_D2-small        PF10431.4     81 sp|O31673|CLPE_BACSU -            699   5.4e-23   80.6   1.7   1   1   4.5e-25   1.5e-22   79.2   0.0     1    71   609   679   609   688 0.94 C-terminal, D2-small domain, of ClpB protein
AAA_5                PF07728.9    139 sp|O31673|CLPE_BACSU -            699   8.7e-16   57.9   3.6   1   2   0.00027     0.092   12.4   0.3     3    24   116   138   114   244 0.73 AAA domain (dynein-related subfamily)
AAA_5                PF07728.9    139 sp|O31673|CLPE_BACSU -            699   8.7e-16   57.9   3.6   2   2   7.8e-14   2.7e-11   43.3   0.0     2   125   442   563   441   573 0.87 AAA domain (dynein-related subfamily)
AAA_16               PF13191.1    185 sp|O31673|CLPE_BACSU -            699   3.7e-13   49.8   3.1   1   3   4.3e-06    0.0015   18.5   0.0     2    46    93   134    92   141 0.85 AAA ATPase domain
AAA_16               PF13191.1    185 sp|O31673|CLPE_BACSU -            699   3.7e-13   49.8   3.1   3   3   8.3e-07   0.00029   20.9   0.0     2    63   411   478   410   542 0.79 AAA ATPase domain
Sigma54_activat      PF00158.21   168 sp|O31673|CLPE_BACSU -            699   7.6e-12   45.0   0.2   1   2    0.0013      0.45    9.9   0.0     2   105    94   195    93   227 0.74 Sigma-54 interaction domain
Sigma54_activat      PF00158.21   168 sp|O31673|CLPE_BACSU -            699   7.6e-12   45.0   0.2   2   2   1.8e-10   6.1e-08   32.3   0.1     5   154   415   572   411   576 0.78 Sigma-54 interaction domain
AAA_22               PF13401.1    131 sp|O31673|CLPE_BACSU -            699   2.5e-11   43.8   0.3   1   2     4e-08   1.4e-05   25.2   0.1     7   101   115   200   108   258 0.82 AAA domain
AAA_22               PF13401.1    131 sp|O31673|CLPE_BACSU -            699   2.5e-11   43.8   0.3   2   2   0.00014     0.047   13.8   0.0     6   101   441   524   437   557 0.69 AAA domain
RuvB_N               PF05496.7    234 sp|O31673|CLPE_BACSU -            699   4.9e-10   38.8   1.1   3   4   1.6e-06   0.00056   19.0   0.1     8    74   393   463   387   482 0.82 Holliday junction DNA helicase ruvB N-terminus
AAA_18               PF13238.1    129 sp|O31673|CLPE_BACSU -            699   2.4e-09   37.5   1.0   1   2   3.7e-06    0.0013   19.0   0.1     3    80   117   191   116   205 0.89 AAA domain
AAA_18               PF13238.1    129 sp|O31673|CLPE_BACSU -            699   2.4e-09   37.5   1.0   2   2   5.5e-05     0.019   15.2   0.0     3    37   444   481   443   527 0.80 AAA domain
AAA_14               PF13173.1    128 sp|O31673|CLPE_BACSU -            699   9.9e-09   35.1   0.3   1   2   0.00015     0.052   13.4   0.0     5    74   115   205   111   249 0.67 AAA domain
AAA_14               PF13173.1    128 sp|O31673|CLPE_BACSU -            699   9.9e-09   35.1   0.3   2   2   1.1e-05    0.0036   17.1   0.0     7    87   444   538   440   573 0.68 AAA domain
IstB_IS21            PF01695.12   178 sp|O31673|CLPE_BACSU -            699   1.9e-07   30.6   0.1   1   2     4e-06    0.0014   18.1   0.0    45   120   110   195    97   241 0.73 IstB-like ATP binding protein
IstB_IS21            PF01695.12   178 sp|O31673|CLPE_BACSU -            699   1.9e-07   30.6   0.1   2   2    0.0013      0.45    9.9   0.0    50    71   442   463   420   490 0.85 IstB-like ATP binding protein
Zeta_toxin           PF06414.7    201 sp|O31673|CLPE_BACSU -            699   4.8e-07   29.0   0.6   2   2   2.6e-07   9.1e-05   21.6   0.0    11    62   433   496   423   533 0.77 Zeta toxin
AAA_17               PF13207.1    121 sp|O31673|CLPE_BACSU -            699     7e-07   30.0   1.7   2   2   3.5e-06    0.0012   19.6   0.0     3    40   443   485   442   614 0.79 AAA domain
UVR                  PF02151.14    36 sp|O31673|CLPE_BACSU -            699   2.2e-06   26.9  10.0   1   1   6.5e-09   2.2e-06   26.9  10.0     2    35   326   359   325   360 0.95 UvrB/uvrC motif
NACHT                PF05729.7    166 sp|O31673|CLPE_BACSU -            699   3.9e-06   26.6   0.1   1   2   7.5e-06    0.0026   17.4   0.0     4    45   116   158   114   212 0.79 NACHT domain
AAA_3                PF07726.6    131 sp|O31673|CLPE_BACSU -            699   5.3e-06   26.0   0.2   2   2   1.8e-06   0.00061   19.4   0.0     5   111   445   560   441   568 0.67 ATPase family associated with various cellular activities (AAA)
RNA_helicase         PF00910.17   107 sp|O31673|CLPE_BACSU -            699   1.8e-05   24.8   0.2   2   2   0.00052      0.18   11.9   0.0     2    25   443   466   442   491 0.83 RNA helicase
ResIII               PF04851.10   184 sp|O31673|CLPE_BACSU -            699   2.5e-05   24.1   0.1   3   3   0.00059       0.2   11.4   0.0     8    50   414   464   409   473 0.84 Type III restriction enzyme, res subunit
DNA_pol3_delta2      PF13177.1    162 sp|O31673|CLPE_BACSU -            699   0.00034   20.2   0.0   1   1   7.1e-06    0.0024   17.5   0.0    16   128   436   537   431   539 0.83 DNA polymerase III, delta subunit
AAA_33               PF13671.1    143 sp|O31673|CLPE_BACSU -            699   0.00037   20.4   0.0   2   2   0.00071      0.25   11.2   0.0     3    25   443   470   442   519 0.80 AAA domain
Torsin               PF06309.6    127 sp|O31673|CLPE_BACSU -            699   0.00066   19.5   0.0   1   1   5.7e-06     0.002   18.0   0.0    13    78   397   464   391   481 0.84 Torsin
DUF258               PF03193.11   161 sp|O31673|CLPE_BACSU -            699   0.00093   18.4   0.2   2   2    0.0019      0.66    9.1   0.1    36    59   440   463   397   545 0.81 Protein of unknown function, DUF258
AAA_25               PF13481.1    194 sp|O31673|CLPE_BACSU -            699   0.00097   18.5   3.7   1   2   0.00014     0.047   13.0   0.1    37    65   116   144   106   208 0.68 AAA domain
TniB                 PF05621.6    302 sp|O31673|CLPE_BACSU -            699   0.00099   17.9   0.1   1   1   1.3e-05    0.0045   15.7   0.1   113   211   151   250   133   260 0.80 Bacterial TniB protein
ABC_tran             PF00005.22   137 sp|O31673|CLPE_BACSU -            699     0.001   19.3   1.3   2   2   0.00042      0.14   12.4   0.0    15    80   443   524   431   584 0.67 ABC transporter
AAA_10               PF12846.2    304 sp|O31673|CLPE_BACSU -            699    0.0015   17.9   0.1   3   3    0.0017      0.57    9.5   0.0     3    37   441   475   440   679 0.75 AAA-like domain
MMR_HSR1             PF01926.18   116 sp|O31673|CLPE_BACSU -            699    0.0025   17.7   0.1   1   2    0.0029      0.98    9.3   0.0     3    88   116   190   114   217 0.75 50S ribosome-binding GTPase
DUF2075              PF09848.4    352 sp|O31673|CLPE_BACSU -            699    0.0047   15.9   0.1   1   1     6e-05     0.021   13.8   0.0     7   119   118   219   112   225 0.78 Uncharacterized conserved protein (DUF2075)
T2SE                 PF00437.15   272 sp|O31673|CLPE_BACSU -            699     0.015   14.2   0.1   1   1   0.00027     0.095   11.5   0.1   126   170   437   480   316   523 0.75 Type II/IV secretion system protein
TrwB_AAD_bind        PF10412.4    386 sp|O31673|CLPE_BACSU -            699     0.023   13.3   0.0   2   2    0.0014      0.47    9.0   0.0    11    51   435   475   430   487 0.85 Type IV secretion-system coupling protein DNA-binding domain
MobB                 PF03205.9    140 sp|O31673|CLPE_BACSU -            699     0.026   14.2   0.1   2   2     0.002      0.68    9.6   0.0     4    25   443   464   441   476 0.86 Molybdopterin guanine dinucleotide synthesis protein B
Cytochrome_C7        PF14522.1     65 sp|O31673|CLPE_BACSU -            699     0.057   13.0   0.5   1   1   0.00032      0.11   12.1   0.5    14    49     2    37     1    57 0.67 Cytochrome c7
zf-CHY               PF05495.7     71 sp|O31673|CLPE_BACSU -            699     0.069   13.3   2.8   1   1   0.00035      0.12   12.5   2.8    21    55     2    40     1    49 0.81 CHY zinc finger
CLP_protease         PF00574.18   182 sp|P80244|CLPP_BACSU -            197   4.2e-85  284.0   0.1   1   1   3.3e-89   4.9e-85  283.7   0.1     2   181    13   192    12   193 0.99 Clp protease
Proteasome           PF00227.21   190 sp|P39070|CLPQ_BACSU -            181   3.2e-26   91.7   0.3   1   1   2.9e-30   4.4e-26   91.3   0.3     2   188     4   178     3   180 0.98 Proteasome subunit
AAA_2                PF07724.9    171 sp|P50866|CLPX_BACSU -            420   1.7e-51  174.5   0.4   1   1     7e-54   3.6e-51  173.4   0.0     3   171   109   305   107   305 0.98 AAA domain (Cdc48 subfamily)
zf-C4_ClpX           PF06689.8     41 sp|P50866|CLPX_BACSU -            420   1.5e-21   75.5   3.5   1   1   7.1e-24   3.6e-21   74.3   3.5     2    41    11    49    10    49 0.97 ClpX C4-type zinc finger
ClpB_D2-small        PF10431.4     81 sp|P50866|CLPX_BACSU -            420   8.2e-20   70.4   0.7   1   1     5e-22   2.6e-19   68.9   0.7     1    75   311   389   311   393 0.94 C-terminal, D2-small domain, of ClpB protein
AAA                  PF00004.24   132 sp|P50866|CLPX_BACSU -            420   9.7e-16   58.1   0.0   1   1   4.6e-18   2.4e-15   56.9   0.0     3   110   114   239   112   265 0.83 ATPase family associated with various cellular activities (AAA)
AAA_5                PF07728.9    139 sp|P50866|CLPX_BACSU -            420   1.1e-06   28.4   0.0   1   1   2.8e-08   1.4e-05   24.8   0.1     3    79   113   188   111   192 0.84 AAA domain (dynein-related subfamily)
RuvB_N               PF05496.7    234 sp|P50866|CLPX_BACSU -            420   5.1e-06   25.7   0.1   1   1   2.5e-08   1.3e-05   24.3   0.1    16   118    65   191    45   194 0.71 Holliday junction DNA helicase ruvB N-terminus
Mg_chelatase         PF01078.16   207 sp|P50866|CLPX_BACSU -            420     3e-05   23.2   0.0   2   3   7.8e-06     0.004   16.3   0.0    23    47   110   134   105   157 0.87 Magnesium chelatase, subunit ChlI
AAA_22               PF13401.1    131 sp|P50866|CLPX_BACSU -            420   5.1e-05   23.4   1.0   1   1   9.1e-07   0.00047   20.3   0.1     4    99   109   186   105   202 0.74 AAA domain
AAA_17               PF13207.1    121 sp|P50866|CLPX_BACSU -            420   6.4e-05   23.7   0.2   1   1   4.2e-07   0.00022   22.0   0.2     2    49   112   161   111   390 0.80 AAA domain
Sigma54_activat      PF00158.21   168 sp|P50866|CLPX_BACSU -            420   0.00048   19.6   0.0   1   2   0.00047      0.24   10.8   0.0    13    44   100   131    89   148 0.84 Sigma-54 interaction domain
AAA_16               PF13191.1    185 sp|P50866|CLPX_BACSU -            420   0.00072   19.5   0.2   1   1     1e-05    0.0053   16.7   0.1    20    49   105   134    88   151 0.82 AAA ATPase domain
MCM                  PF00493.18   331 sp|P50866|CLPX_BACSU -            420    0.0012   17.7   0.0   1   1   4.1e-06    0.0021   16.9   0.0    17   137    66   190    54   195 0.76 MCM2/3/5 family
AAA_14               PF13173.1    128 sp|P50866|CLPX_BACSU -            420    0.0012   18.6   0.1   1   1   6.8e-06    0.0035   17.2   0.0     4    74   111   187   108   218 0.64 AAA domain
AAA_18               PF13238.1    129 sp|P50866|CLPX_BACSU -            420     0.002   18.4   0.6   1   1   1.8e-05    0.0091   16.2   0.1     1    55   112   170   112   204 0.58 AAA domain
IstB_IS21            PF01695.12   178 sp|P50866|CLPX_BACSU -            420    0.0058   16.0   0.0   1   1     2e-05      0.01   15.2   0.0    47    68   109   130    94   133 0.90 IstB-like ATP binding protein
T2SE                 PF00437.15   272 sp|P50866|CLPX_BACSU -            420    0.0096   14.8   0.0   1   1   3.7e-05     0.019   13.8   0.0   122   153   106   134    43   144 0.72 Type II/IV secretion system protein
Sigma54_activ_2      PF14532.1    138 sp|P50866|CLPX_BACSU -            420    0.0099   15.9   0.0   1   1   7.8e-05      0.04   13.9   0.0    13    81   101   186    94   192 0.64 Sigma-54 interaction domain
ABC_tran             PF00005.22   137 sp|P50866|CLPX_BACSU -            420     0.012   15.8   0.0   1   1   7.2e-05     0.037   14.3   0.0    12    37   110   135   103   219 0.77 ABC transporter
NACHT                PF05729.7    166 sp|P50866|CLPX_BACSU -            420     0.018   14.7   0.1   1   1   0.00025      0.13   11.9   0.0     3    24   112   133   110   143 0.88 NACHT domain
PhoH                 PF02562.11   205 sp|P50866|CLPX_BACSU -            420     0.028   13.6   0.0   1   1   0.00012     0.063   12.4   0.0    18    40   108   130    93   134 0.81 PhoH-like protein
ResIII               PF04851.10   184 sp|P50866|CLPX_BACSU -            420      0.03   14.1   0.1   1   1    0.0002       0.1   12.3   0.0    22    64    99   147    64   232 0.69 Type III restriction enzyme, res subunit
AAA_19               PF13245.1     76 sp|P50866|CLPX_BACSU -            420     0.033   13.9   0.0   1   1   0.00018     0.093   12.4   0.0    10    35   110   133   103   166 0.81 Part of AAA domain
AAA_33               PF13671.1    143 sp|P50866|CLPX_BACSU -            420     0.058   13.2   0.0   1   1    0.0002       0.1   12.4   0.0     4    29   114   139   112   218 0.78 AAA domain
AAA_25               PF13481.1    194 sp|P50866|CLPX_BACSU -            420      0.08   12.3   0.1   1   1   0.00036      0.19   11.1   0.1    36   130   112   199   102   207 0.67 AAA domain
DEAD                 PF00270.24   169 sp|P50866|CLPX_BACSU -            420     0.082   12.4   0.0   1   1   0.00051      0.26   10.7   0.0    13    33   108   128    99   361 0.64 DEAD/DEAH box helicase
AAA_28               PF13521.1    163 sp|P50866|CLPX_BACSU -            420     0.098   12.6   0.0   1   1   0.00057      0.29   11.0   0.0     2    27   112   138   111   172 0.84 AAA domain
RNA_helicase         PF00910.17   107 sp|P50866|CLPX_BACSU -            420      0.12   12.5   0.0   1   1   0.00059       0.3   11.2   0.0     2    23   113   134   112   197 0.86 RNA helicase
AAA_29               PF13555.1     62 sp|P50866|CLPX_BACSU -            420      0.14   11.7   0.0   1   1   0.00059       0.3   10.6   0.0    17    43   105   129    97   140 0.73 P-loop containing region of AAA domain
AAA_2                PF07724.9    171 sp|P39778|CLPY_BACSU -            467   2.4e-49  167.5   3.6   1   2   4.5e-08   2.6e-05   24.2   0.1     5    61    54   110    52   134 0.89 AAA domain (Cdc48 subfamily)
AAA_2                PF07724.9    171 sp|P39778|CLPY_BACSU -            467   2.4e-49  167.5   3.6   2   2     1e-44   5.7e-42  143.5   0.7    14   171   213   353   196   353 0.90 AAA domain (Cdc48 subfamily)
AAA                  PF00004.24   132 sp|P39778|CLPY_BACSU -            467     4e-17   62.6   0.1   1   2   9.4e-10   5.4e-07   29.8   0.1     1    65    55   114    55   151 0.71 ATPase family associated with various cellular activities (AAA)
AAA                  PF00004.24   132 sp|P39778|CLPY_BACSU -            467     4e-17   62.6   0.1   2   2     9e-10   5.1e-07   29.9   0.0    51   130   264   356   225   358 0.82 ATPase family associated with various cellular activities (AAA)
ClpB_D2-small        PF10431.4     81 sp|P39778|CLPY_BACSU -            467   5.8e-09   35.7   0.1   1   1   3.9e-11   2.2e-08   33.8   0.1     1    63   359   430   359   435 0.84 C-terminal, D2-small domain, of ClpB protein
AAA_5                PF07728.9    139 sp|P39778|CLPY_BACSU -            467   8.9e-08   31.9   0.3   1   2   7.3e-07   0.00042   20.0   0.1     1    37    54    90    54   136 0.92 AAA domain (dynein-related subfamily)
AAA_5                PF07728.9    139 sp|P39778|CLPY_BACSU -            467   8.9e-08   31.9   0.3   2   2    0.0017      0.95    9.1   0.0    57    79   264   286   214   292 0.89 AAA domain (dynein-related subfamily)
AAA_22               PF13401.1    131 sp|P39778|CLPY_BACSU -            467   2.3e-05   24.5   0.0   1   2   9.9e-06    0.0057   16.8   0.0     7    86    55   132    52   147 0.72 AAA domain
AAA_17               PF13207.1    121 sp|P39778|CLPY_BACSU -            467   3.3e-05   24.7   0.1   1   1   3.3e-07   0.00019   22.2   0.0     2    66    55   130    54   194 0.73 AAA domain
RuvB_N               PF05496.7    234 sp|P39778|CLPY_BACSU -            467   5.9e-05   22.2   0.2   1   2   6.6e-06    0.0038   16.3   0.0    22   109    14   115     3   130 0.66 Holliday junction DNA helicase ruvB N-terminus
Mg_chelatase         PF01078.16   207 sp|P39778|CLPY_BACSU -            467   0.00027   20.1   0.6   2   3   2.5e-05     0.014   14.5   0.0    24    46    54    76    50   103 0.83 Magnesium chelatase, subunit ChlI
Sigma54_activat      PF00158.21   168 sp|P39778|CLPY_BACSU -            467   0.00035   20.0   2.0   1   2   3.2e-05     0.018   14.4   0.0    22    60    52    87    34    91 0.83 Sigma-54 interaction domain
MCM                  PF00493.18   331 sp|P39778|CLPY_BACSU -            467   0.00042   19.2   3.8   1   2   3.9e-06    0.0022   16.8   0.0    10    81     3    76     1   101 0.83 MCM2/3/5 family
TIP49                PF06068.8    398 sp|P39778|CLPY_BACSU -            467   0.00049   18.9   0.3   1   2   8.5e-07   0.00049   18.9   0.3    19    88    12    88     5   131 0.76 TIP49 C-terminus
AAA_18               PF13238.1    129 sp|P39778|CLPY_BACSU -            467   0.00099   19.4   0.8   1   1   4.6e-06    0.0026   18.0   0.1     1    68    55   130    55   149 0.63 AAA domain
Zeta_toxin           PF06414.7    201 sp|P39778|CLPY_BACSU -            467    0.0011   18.0   0.0   1   1   4.5e-06    0.0025   16.9   0.0    11    56    47    91    38   138 0.72 Zeta toxin
AAA_16               PF13191.1    185 sp|P39778|CLPY_BACSU -            467    0.0015   18.5   0.0   1   1   1.1e-05     0.006   16.5   0.0    24   110    52   137    37   303 0.69 AAA ATPase domain
IstB_IS21            PF01695.12   178 sp|P39778|CLPY_BACSU -            467     0.011   15.1   0.0   1   1   9.1e-05     0.052   12.9   0.0    48    68    53    73    36    77 0.90 IstB-like ATP binding protein
IPT                  PF01745.11   233 sp|P39778|CLPY_BACSU -            467     0.016   14.3   0.0   1   1   6.7e-05     0.038   13.1   0.0     5    32    56    83    52    95 0.91 Isopentenyl transferase
AAA_33               PF13671.1    143 sp|P39778|CLPY_BACSU -            467     0.021   14.7   0.0   1   1    0.0001     0.059   13.2   0.0     2    32    55    85    55   138 0.75 AAA domain
DEAD                 PF00270.24   169 sp|P39778|CLPY_BACSU -            467     0.029   13.8   0.1   1   2   0.00057      0.33   10.4   0.0    15    32    53    70    35   148 0.81 DEAD/DEAH box helicase
ABC_tran             PF00005.22   137 sp|P39778|CLPY_BACSU -            467     0.066   13.5   0.8   1   1   0.00032      0.18   12.0   0.2    14    80    55   173    52   239 0.71 ABC transporter
G-alpha              PF00503.15   389 sp|P39778|CLPY_BACSU -            467     0.073   11.7   0.4   1   1    0.0002      0.11   11.1   0.4    40   215    34   296     3   307 0.72 G-protein alpha subunit
AAA_28               PF13521.1    163 sp|P39778|CLPY_BACSU -            467     0.094   12.6   0.0   1   1   0.00057      0.33   10.9   0.0     2    70    55   123    54   134 0.74 AAA domain
PLDc_2               PF13091.1    126 sp|P45860|CLS1_BACSU -            500   1.9e-41  140.7   0.0   1   2     2e-14   5.9e-11   42.2   0.0     3   126   156   297   154   297 0.82 PLD-like domain
PLDc_2               PF13091.1    126 sp|P45860|CLS1_BACSU -            500   1.9e-41  140.7   0.0   2   2   3.1e-31   9.1e-28   96.5   0.0     3   125   342   467   340   468 0.93 PLD-like domain
PLDc                 PF00614.17    28 sp|P45860|CLS1_BACSU -            500   7.4e-17   60.5   0.6   1   2   2.8e-10   8.3e-07   28.6   0.2     2    26   238   262   237   264 0.90 Phospholipase D Active site motif
PLDc                 PF00614.17    28 sp|P45860|CLS1_BACSU -            500   7.4e-17   60.5   0.6   2   2   9.4e-11   2.8e-07   30.1   0.0     3    28   415   440   413   440 0.95 Phospholipase D Active site motif
PLDc_N               PF13396.1     46 sp|P45860|CLS1_BACSU -            500   7.2e-07   28.7   1.7   1   1   7.1e-10   2.1e-06   27.2   1.7     4    45    41    82    38    82 0.91 Phospholipase_D-nuclease N-terminal
DUF3810              PF12725.2    318 sp|P45860|CLS1_BACSU -            500     0.014   14.2   3.1   1   1   7.4e-06     0.022   13.6   3.1    14   106    17   107     7   185 0.65 Protein of unknown function (DUF3810)
Regulator_TrmB       PF11495.3    234 sp|P45860|CLS1_BACSU -            500     0.073   12.0   0.0   1   1   5.9e-05      0.17   10.7   0.0    16    62   341   389   332   399 0.82 Archaeal transcriptional regulator TrmB
PLDc_2               PF13091.1    126 sp|P71040|CLSA_BACSU -            482   1.2e-35  122.0   0.0   1   2   1.5e-14   1.8e-11   43.8   0.0     2   126   135   277   134   277 0.79 PLD-like domain
PLDc_2               PF13091.1    126 sp|P71040|CLSA_BACSU -            482   1.2e-35  122.0   0.0   2   2   1.7e-24     2e-21   76.0   0.0     2   124   323   448   322   450 0.93 PLD-like domain
PLDc_N               PF13396.1     46 sp|P71040|CLSA_BACSU -            482     1e-12   47.5   8.8   1   1   1.6e-15     2e-12   46.5   8.8     2    45    12    56    11    57 0.93 Phospholipase_D-nuclease N-terminal
PLDc                 PF00614.17    28 sp|P71040|CLSA_BACSU -            482   1.2e-12   47.1   6.6   1   2   2.2e-08   2.7e-05   23.7   0.4     2    28   218   244   217   244 0.94 Phospholipase D Active site motif
PLDc                 PF00614.17    28 sp|P71040|CLSA_BACSU -            482   1.2e-12   47.1   6.6   2   2     3e-09   3.7e-06   26.5   0.2     3    25   397   419   395   422 0.89 Phospholipase D Active site motif
ATG27                PF09451.5    269 sp|P71040|CLSA_BACSU -            482     0.015   14.5   0.1   1   1   2.2e-05     0.027   13.7   0.1   195   225    28    58    25    69 0.83 Autophagy-related protein 27
DUF805               PF05656.9    120 sp|P71040|CLSA_BACSU -            482     0.025   14.4   5.3   1   1   3.4e-05     0.042   13.6   5.3    47   102     4    54     1    61 0.86 Protein of unknown function (DUF805)
DUF3810              PF12725.2    318 sp|P71040|CLSA_BACSU -            482      0.04   12.8   0.5   1   1   4.5e-05     0.055   12.3   0.5    27    89     5    68     1   154 0.68 Protein of unknown function (DUF3810)
UPF0104              PF03706.8    294 sp|P71040|CLSA_BACSU -            482     0.051   12.8   2.9   1   1   6.2e-05     0.077   12.2   2.9   115   187     9    83     1   109 0.69 Uncharacterised protein family (UPF0104)
AA_permease_2        PF13520.1    426 sp|P71040|CLSA_BACSU -            482     0.083   11.4   5.2   1   1     9e-05      0.11   10.9   5.2   352   405     2    55     1    66 0.86 Amino acid permease
DUF4131              PF13567.1    176 sp|P71040|CLSA_BACSU -            482     0.085   12.2   0.7   1   1   0.00013      0.16   11.3   0.7    15    72     7    64     2   101 0.70 Domain of unknown function (DUF4131)
2TM                  PF13239.1     83 sp|P71040|CLSA_BACSU -            482      0.12   12.5   3.6   1   1   0.00033       0.4   10.7   3.6    19    76     8    70     5    78 0.67 2TM domain
zf-H2C2              PF09337.5     39 sp|P71040|CLSA_BACSU -            482      0.14   11.5   0.1   2   2   0.00069      0.85    9.0   0.0    21    32   467   478   463   480 0.89 His(2)-Cys(2) zinc finger
PLDc_2               PF13091.1    126 sp|P45865|CLSB_BACSU -            398   4.3e-35  120.2   0.2   1   2   2.5e-12   9.3e-09   35.1   0.1     3   100    60   175    58   199 0.82 PLD-like domain
PLDc_2               PF13091.1    126 sp|P45865|CLSB_BACSU -            398   4.3e-35  120.2   0.2   2   2   3.1e-27   1.2e-23   83.2   0.0     3   123   240   363   238   367 0.91 PLD-like domain
PLDc                 PF00614.17    28 sp|P45865|CLSB_BACSU -            398     3e-16   58.6   0.4   1   2   5.6e-10   2.1e-06   27.3   0.0     3    28   143   168   141   168 0.90 Phospholipase D Active site motif
PLDc                 PF00614.17    28 sp|P45865|CLSB_BACSU -            398     3e-16   58.6   0.4   2   2   1.6e-10   5.9e-07   29.0   0.1     1    28   311   338   311   338 0.96 Phospholipase D Active site motif
Regulator_TrmB       PF11495.3    234 sp|P45865|CLSB_BACSU -            398     0.021   13.7   0.0   2   2   4.8e-05      0.18   10.7   0.0    19    58   242   282   235   296 0.85 Archaeal transcriptional regulator TrmB
APOBEC_C             PF05240.9     55 sp|P45865|CLSB_BACSU -            398     0.042   13.2   0.1   1   3   0.00022      0.81    9.1   0.0     5    26   113   134   110   135 0.89 APOBEC-like C-terminal domain
PRK                  PF00485.13   194 sp|P54556|COAA_BACSU -            319     8e-15   54.9   0.0   1   1   5.4e-18   1.6e-14   53.9   0.0     1   147    91   245    91   253 0.84 Phosphoribulokinase / Uridine kinase family
AAA_17               PF13207.1    121 sp|P54556|COAA_BACSU -            319   1.3e-05   25.9   0.0   1   1   9.8e-09   2.9e-05   24.8   0.0     1   109    91   250    91   271 0.70 AAA domain
AAA_18               PF13238.1    129 sp|P54556|COAA_BACSU -            319   5.6e-05   23.4   0.0   1   1   5.3e-08   0.00016   22.0   0.0     1    98    92   231    92   248 0.59 AAA domain
CoaE                 PF01121.15   180 sp|P54556|COAA_BACSU -            319     0.053   12.9   0.0   1   1     4e-05      0.12   11.7   0.0     2    23    91   112    90   123 0.87 Dephospho-CoA kinase
DFP                  PF04127.10   185 sp|O35033|COABC_BACSU -            406   4.2e-73  244.9   4.2   2   2   7.2e-76   3.6e-72  241.8   0.9     1   185   187   370   187   370 0.96 DNA / pantothenate metabolism flavoprotein
Flavoprotein         PF02441.14   129 sp|O35033|COABC_BACSU -            406   2.3e-35  121.0   1.6   1   1   9.6e-39   4.8e-35  120.0   1.6     2   128     6   132     5   133 0.96 Flavoprotein
CTP_transf_2         PF01467.21   157 sp|O34797|COAD_BACSU -            161   3.7e-23   82.2   0.0   1   1     6e-27   4.5e-23   82.0   0.0     1   156     6   134     6   135 0.94 Cytidylyltransferase
Citrate_ly_lig       PF08218.6    182 sp|O34797|COAD_BACSU -            161   1.7e-06   27.6   0.0   1   1   4.7e-10   3.5e-06   26.6   0.0     9    73    12    78     3    86 0.91 Citrate lyase ligase C-terminal domain
CoaE                 PF01121.15   180 sp|O34932|COAE_BACSU -            197   2.2e-65  219.4   2.5   1   1     2e-68   2.5e-65  219.2   2.5     1   179     3   183     3   184 0.96 Dephospho-CoA kinase
AAA_17               PF13207.1    121 sp|O34932|COAE_BACSU -            197   1.9e-06   28.6   1.1   1   1   5.6e-09     7e-06   26.8   1.1     1    78     4   102     4   187 0.57 AAA domain
AAA_33               PF13671.1    143 sp|O34932|COAE_BACSU -            197   5.7e-06   26.2   0.1   1   1   5.4e-08   6.7e-05   22.7   0.1     4   122     7   151     1   166 0.58 AAA domain
AAA_18               PF13238.1    129 sp|O34932|COAE_BACSU -            197     5e-05   23.6   2.8   1   1   1.8e-07   0.00022   21.5   2.8     1   120     5   155     5   174 0.61 AAA domain
Cytidylate_kin2      PF13189.1    179 sp|O34932|COAE_BACSU -            197    0.0001   22.2   3.0   1   1   1.1e-06    0.0014   18.6   3.0     1   148     4   161     4   172 0.67 Cytidylate kinase-like family
Dynamin_N            PF00350.18   168 sp|O34932|COAE_BACSU -            197      0.02   14.7   0.7   1   1   2.4e-05     0.029   14.1   0.6     1    33     5    37     5   189 0.90 Dynamin family
SKI                  PF01202.17   158 sp|O34932|COAE_BACSU -            197     0.035   13.9   3.2   1   2   0.00067      0.83    9.4   0.0     2    45    12    57    11    63 0.81 Shikimate kinase
Zeta_toxin           PF06414.7    201 sp|O34932|COAE_BACSU -            197      0.04   13.0   1.4   1   2   0.00058      0.72    8.9   0.0    20    65     6    52     2   112 0.86 Zeta toxin
NTPase_1             PF03266.10   168 sp|O34932|COAE_BACSU -            197     0.052   13.2   0.8   1   2   0.00014      0.17   11.6   0.0     2    91     5    89     4   104 0.80 NTPase
AAA_28               PF13521.1    163 sp|O34932|COAE_BACSU -            197     0.072   13.0   1.1   1   1   0.00011      0.13   12.1   0.2     3    38     6    43     4   118 0.70 AAA domain
MMR_HSR1             PF01926.18   116 sp|O34932|COAE_BACSU -            197      0.11   12.4   0.4   1   1   0.00031      0.38   10.7   0.4     2    24     5    32     4   195 0.58 50S ribosome-binding GTPase
APS_kinase           PF01583.15   157 sp|O34932|COAE_BACSU -            197      0.23   11.0   1.6   1   2   0.00048      0.59    9.7   0.1     3    24     3    24     1    42 0.85 Adenylylsulphate kinase
Pan_kinase           PF03309.9    206 sp|P37564|COAX_BACSU -            258   9.3e-71  237.5   0.0   1   1   1.5e-74   1.1e-70  237.3   0.0     1   206     2   206     2   206 0.98 Type III pantothenate kinase
CodY                 PF06018.9    177 sp|P39779|CODY_BACSU -            259   2.2e-83  277.8   0.7   1   1   2.8e-86   2.8e-83  277.5   0.7     2   177     3   178     2   178 0.99 CodY GAF-like domain
HTH_CodY             PF08222.6     61 sp|P39779|CODY_BACSU -            259   2.5e-37  126.0   1.8   1   1   4.8e-40   4.8e-37  125.1   1.8     2    61   198   257   197   257 0.98 CodY helix-turn-helix domain
HTH_11               PF08279.7     55 sp|P39779|CODY_BACSU -            259   6.6e-06   25.6   0.6   2   2   7.8e-08   7.7e-05   22.2   0.1     4    49   189   233   187   236 0.86 HTH domain
Rrf2                 PF02082.15    83 sp|P39779|CODY_BACSU -            259   4.3e-05   23.5   0.5   2   2     1e-06     0.001   19.1   0.1    23    64   198   240   170   244 0.84 Transcriptional regulator
HTH_20               PF12840.2     61 sp|P39779|CODY_BACSU -            259   4.4e-05   23.2   0.0   2   2   7.9e-07   0.00079   19.1   0.0    15    57   190   233   189   236 0.82 Helix-turn-helix domain
MarR_2               PF12802.2     62 sp|P39779|CODY_BACSU -            259   8.9e-05   22.0   0.1   1   1   2.1e-07   0.00021   20.9   0.1    13    54   193   233   184   239 0.85 MarR family
MarR                 PF01047.17    59 sp|P39779|CODY_BACSU -            259   0.00015   21.3   0.0   1   1   3.3e-07   0.00033   20.3   0.0    20    50   203   233   189   235 0.87 MarR family
HTH_24               PF13412.1     48 sp|P39779|CODY_BACSU -            259   0.00025   20.3   1.0   1   1   5.7e-07   0.00057   19.2   0.1     8    48   190   231   185   231 0.89 Winged helix-turn-helix DNA-binding
HTH_41               PF14502.1     48 sp|P39779|CODY_BACSU -            259   0.00029   20.4   0.6   2   2   2.9e-06    0.0029   17.1   0.1    12    48   206   242   201   242 0.94 Helix-turn-helix domain
GntR                 PF00392.16    64 sp|P39779|CODY_BACSU -            259   0.00034   20.0   0.1   1   1     1e-06     0.001   18.4   0.1    28    63   204   241   197   242 0.85 Bacterial regulatory proteins, gntR family
TrmB                 PF01978.14    68 sp|P39779|CODY_BACSU -            259    0.0011   18.6   1.2   1   1     3e-06    0.0029   17.2   0.1    23    55   201   233   191   244 0.89 Sugar-specific transcriptional regulator TrmB
HTH_Crp_2            PF13545.1     76 sp|P39779|CODY_BACSU -            259    0.0018   18.0   0.1   1   1   4.2e-06    0.0041   16.8   0.1    33    71   205   248   200   253 0.84 Crp-like helix-turn-helix domain
GAF                  PF01590.21   154 sp|P39779|CODY_BACSU -            259    0.0018   18.3   0.0   1   1   3.5e-06    0.0035   17.4   0.0    78   154    83   154    64   154 0.80 GAF domain
HTH_5                PF01022.15    47 sp|P39779|CODY_BACSU -            259     0.014   15.0   0.2   1   1   5.5e-05     0.055   13.1   0.0    13    47   198   232   197   232 0.93 Bacterial regulatory protein, arsR family
RPA_C                PF08784.6    102 sp|P39779|CODY_BACSU -            259     0.063   13.6   0.1   1   1   0.00016      0.16   12.4   0.1    26    95   160   230   150   232 0.85 Replication protein A C terminal
4HBT                 PF03061.17    79 sp|P14205|COMA2_BACSU -            126   1.9e-18   66.3   0.2   1   1   5.1e-22   2.5e-18   65.9   0.2     1    79    37   115    37   115 0.98 Thioesterase superfamily
DUF4442              PF14539.1    132 sp|P14205|COMA2_BACSU -            126   0.00091   19.2   0.7   1   1   2.1e-07     0.001   19.0   0.7    17   122     9   113     1   123 0.83 Domain of unknown function (DUF4442)
DUF2222              PF09984.4    146 sp|P14205|COMA2_BACSU -            126     0.057   12.8   0.0   1   1   1.9e-05     0.096   12.1   0.0    28    70    76   118    56   123 0.84 Uncharacterized signal transduction histidine kinase domain (DUF2222)
2-ph_phosp           PF04029.9    234 sp|O06738|COMB_BACSU -            228   8.4e-50  168.9   0.9   1   1   9.1e-54   1.4e-49  168.2   0.9     2   231     3   220     2   223 0.92 2-phosphosulpholactate phosphatase
dCMP_cyt_deam_1      PF00383.17   102 sp|P32393|COMEB_BACSU -            189   2.8e-27   94.3   1.4   1   1   7.8e-31   3.9e-27   93.8   1.4     2   102     5   117     4   117 0.97 Cytidine and deoxycytidylate deaminase zinc-binding region
MafB19-deam          PF14437.1    146 sp|P32393|COMEB_BACSU -            189    0.0079   15.8   0.6   1   1   2.7e-06     0.013   15.1   0.6    80   119    68   106    61   120 0.87 MafB19-like deaminase
GSP_synth            PF03738.9     97 sp|P32393|COMEB_BACSU -            189     0.089   13.0   0.1   1   1   3.4e-05      0.17   12.1   0.1    10    42   115   147   107   179 0.89 Glutathionylspermidine synthase preATP-grasp
F420_oxidored        PF03807.12    96 sp|P39696|COMER_BACSU -            273   6.6e-20   71.3   0.0   1   1   9.1e-23   1.5e-19   70.2   0.0     1    96     2    98     2    98 0.96 NADP oxidoreductase coenzyme F420-dependent
P5CR_dimer           PF14748.1    107 sp|P39696|COMER_BACSU -            273   5.6e-16   58.4   0.0   1   1   5.1e-19   8.5e-16   57.9   0.0     7   106   163   262   157   263 0.92 Pyrroline-5-carboxylate reductase dimerisation
NAD_binding_2        PF03446.10   163 sp|P39696|COMER_BACSU -            273   4.5e-09   36.3   0.0   1   1   7.7e-12   1.3e-08   34.8   0.0     2   106     1   106     1   156 0.83 NAD binding domain of 6-phosphogluconate dehydrogenase
Shikimate_DH         PF01488.15   135 sp|P39696|COMER_BACSU -            273   1.8e-06   28.1   0.6   1   1   5.6e-09   9.3e-06   25.7   0.3    15    84     3    71     1   167 0.84 Shikimate / quinate 5-dehydrogenase
NAD_Gly3P_dh_N       PF01210.18   157 sp|P39696|COMER_BACSU -            273    0.0005   19.8   1.2   1   1   1.3e-06    0.0021   17.8   0.9     1   111     2   104     2   157 0.76 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus
GFO_IDH_MocA         PF01408.17   120 sp|P39696|COMER_BACSU -            273    0.0018   18.7   0.0   1   1   2.4e-06     0.004   17.6   0.0     1    82     1    82     1    95 0.79 Oxidoreductase family, NAD-binding Rossmann fold
ApbA                 PF02558.11   151 sp|P39696|COMER_BACSU -            273    0.0098   15.3   0.0   1   1   1.3e-05     0.022   14.2   0.0     1   114     3   108     3   133 0.70 Ketopantoate reductase PanE/ApbA
DUF3895              PF13034.1     78 sp|P39696|COMER_BACSU -            273     0.012   15.0   0.2   1   1   1.8e-05      0.03   13.7   0.2     7    68    39    97    15   104 0.87 Protein of unknown function (DUF3895)
Lgl_C                PF08596.5    395 sp|P39696|COMER_BACSU -            273     0.016   13.6   0.1   1   1   1.7e-05     0.028   12.9   0.1   197   300   128   231   111   253 0.85 Lethal giant larvae(Lgl) like, C-terminal
Helicase_C           PF00271.26    78 sp|P39145|COMFA_BACSU -            463   4.3e-11   42.5   0.1   1   1   6.4e-14   9.4e-11   41.4   0.1     9    78   355   424   349   424 0.86 Helicase conserved C-terminal domain
ResIII               PF04851.10   184 sp|P39145|COMFA_BACSU -            463   4.5e-10   39.6   0.0   1   2   9.7e-11   1.4e-07   31.4   0.0     3   183   120   268   118   269 0.83 Type III restriction enzyme, res subunit
DEAD                 PF00270.24   169 sp|P39145|COMFA_BACSU -            463   1.9e-08   33.9   0.0   1   2   2.4e-10   3.6e-07   29.8   0.0     8   167   133   272   123   274 0.79 DEAD/DEAH box helicase
Flavi_DEAD           PF07652.9    148 sp|P39145|COMFA_BACSU -            463   6.1e-05   22.8   0.0   1   1   1.1e-07   0.00016   21.4   0.0     3   138   138   269   136   275 0.75 Flavivirus DEAD domain
AAA_30               PF13604.1    196 sp|P39145|COMFA_BACSU -            463   0.00031   20.3   0.0   1   1   4.3e-07   0.00063   19.3   0.0     2   102   121   235   120   263 0.72 AAA domain
TEX12                PF15219.1    100 sp|P39145|COMFA_BACSU -            463    0.0048   16.8   0.0   1   1   7.5e-06     0.011   15.6   0.0    35    94   204   263   195   267 0.86 Testis-expressed 12
Plant_tran           PF04827.9    205 sp|P39145|COMFA_BACSU -            463    0.0066   15.8   0.1   1   1   8.3e-06     0.012   14.9   0.1    37    74   109   147    96   155 0.89 Plant transposon protein
Sigma54_activ_2      PF14532.1    138 sp|P39145|COMFA_BACSU -            463     0.021   14.8   0.0   1   1   4.2e-05     0.062   13.3   0.0    71   124   228   280   212   283 0.91 Sigma-54 interaction domain
AAA_19               PF13245.1     76 sp|P39145|COMFA_BACSU -            463     0.053   13.2   0.0   1   1   8.3e-05      0.12   12.1   0.0     3    62   132   187   130   218 0.85 Part of AAA domain
PP_kinase            PF02503.12   207 sp|P39145|COMFA_BACSU -            463      0.11   12.0   0.1   1   1   0.00026      0.39   10.1   0.0    19   101   227   353   223   360 0.69 Polyphosphate kinase middle domain
Pribosyltran         PF00156.22   125 sp|P39147|COMFC_BACSU -            229   7.2e-07   28.9   0.0   1   1     5e-10   9.3e-07   28.6   0.0    37   124   137   226    98   227 0.86 Phosphoribosyl transferase domain
DZR                  PF12773.2     50 sp|P39147|COMFC_BACSU -            229    0.0063   16.2   5.7   1   1   6.8e-06     0.013   15.3   5.7     8    49    22    60     3    61 0.81 Double zinc ribbon
PRTase_2             PF15609.1    191 sp|P39147|COMFC_BACSU -            229     0.024   13.9   0.0   1   1   1.8e-05     0.034   13.4   0.0   113   159   181   227   163   229 0.81 Phosphoribosyl transferase
PolC_DP2             PF03833.8    900 sp|P39147|COMFC_BACSU -            229     0.095   10.3   0.4   1   1   6.5e-05      0.12   10.0   0.4   657   693    28    67    23   114 0.66 DNA polymerase II large subunit DP2
zinc-ribbons_6       PF07191.7     70 sp|P39147|COMFC_BACSU -            229      0.49   10.2   7.4   1   1   5.5e-05       0.1   12.3   3.3     2    37    27    61    26    67 0.92 zinc-ribbons
zf-C3HC4_3           PF13920.1     50 sp|P39147|COMFC_BACSU -            229      0.75    9.5   9.4   1   2   8.4e-05      0.16   11.7   3.7     5    46     3    50     1    53 0.67 Zinc finger, C3HC4 type (RING finger)
T2SE                 PF00437.15   272 sp|P25953|COMGA_BACSU -            356   9.7e-77  257.5   1.3   1   1   2.6e-79   1.3e-76  257.0   1.3     6   270    14   275     9   277 0.96 Type II/IV secretion system protein
AAA_14               PF13173.1    128 sp|P25953|COMGA_BACSU -            356   3.9e-05   23.5   0.0   1   1   1.5e-07   7.7e-05   22.5   0.0     3    95   138   237   136   252 0.68 AAA domain
AAA_22               PF13401.1    131 sp|P25953|COMGA_BACSU -            356   0.00026   21.1   0.0   1   1   1.1e-06   0.00056   20.0   0.0     3    63   136   193   133   235 0.73 AAA domain
AAA_23               PF13476.1    202 sp|P25953|COMGA_BACSU -            356   0.00058   20.2   0.0   1   1   2.4e-06    0.0012   19.1   0.0    15    38   130   156   116   198 0.89 AAA domain
MobB                 PF03205.9    140 sp|P25953|COMGA_BACSU -            356    0.0013   18.4   0.0   1   1   5.3e-06    0.0027   17.4   0.0     3    33   140   170   139   181 0.83 Molybdopterin guanine dinucleotide synthesis protein B
AAA_16               PF13191.1    185 sp|P25953|COMGA_BACSU -            356    0.0018   18.2   0.0   1   1   7.6e-06    0.0039   17.2   0.0    22    81   135   210   127   277 0.70 AAA ATPase domain
AAA_19               PF13245.1     76 sp|P25953|COMGA_BACSU -            356    0.0022   17.7   0.1   1   1   1.5e-05    0.0076   15.9   0.0     9    35   136   162   129   195 0.82 Part of AAA domain
SRP54                PF00448.17   196 sp|P25953|COMGA_BACSU -            356     0.004   16.6   0.0   1   1   1.2e-05    0.0059   16.0   0.0     3    33   139   169   137   224 0.85 SRP54-type protein, GTPase domain
AAA_29               PF13555.1     62 sp|P25953|COMGA_BACSU -            356    0.0078   15.7   0.1   1   1   3.1e-05     0.016   14.7   0.1    22    48   137   160   129   168 0.72 P-loop containing region of AAA domain
AAA_17               PF13207.1    121 sp|P25953|COMGA_BACSU -            356     0.009   16.8   0.3   1   1   5.9e-05      0.03   15.1   0.0     3    38   141   182   139   264 0.59 AAA domain
ResIII               PF04851.10   184 sp|P25953|COMGA_BACSU -            356    0.0099   15.7   0.0   1   1   3.6e-05     0.018   14.8   0.0    22    53   135   165   104   177 0.80 Type III restriction enzyme, res subunit
cobW                 PF02492.14   178 sp|P25953|COMGA_BACSU -            356      0.01   15.3   0.0   1   1   3.1e-05     0.016   14.6   0.0     3    47   140   184   138   212 0.76 CobW/HypB/UreG, nucleotide-binding domain
AAA_18               PF13238.1    129 sp|P25953|COMGA_BACSU -            356      0.01   16.1   0.2   1   1   6.8e-05     0.035   14.4   0.0     2    42   141   182   140   239 0.79 AAA domain
AAA_30               PF13604.1    196 sp|P25953|COMGA_BACSU -            356     0.014   15.0   0.0   1   1   4.6e-05     0.024   14.2   0.0    13    50   132   170   126   192 0.85 AAA domain
AAA_33               PF13671.1    143 sp|P25953|COMGA_BACSU -            356     0.014   15.2   1.0   2   2   0.00024      0.12   12.2   0.0     1    23   139   161   139   253 0.76 AAA domain
DAP3                 PF10236.4    309 sp|P25953|COMGA_BACSU -            356     0.018   13.9   0.0   1   1   7.3e-05     0.037   12.9   0.0    21    50   135   164   128   176 0.86 Mitochondrial ribosomal death-associated protein 3
TrwB_AAD_bind        PF10412.4    386 sp|P25953|COMGA_BACSU -            356     0.021   13.4   0.0   1   1   6.5e-05     0.033   12.8   0.0    18    48   140   170   132   174 0.90 Type IV secretion-system coupling protein DNA-binding domain
AAA                  PF00004.24   132 sp|P25953|COMGA_BACSU -            356     0.029   14.5   0.1   1   1    0.0001     0.053   13.7   0.1     1    26   140   165   140   276 0.83 ATPase family associated with various cellular activities (AAA)
PhoH                 PF02562.11   205 sp|P25953|COMGA_BACSU -            356      0.03   13.5   0.0   1   1   0.00011     0.055   12.6   0.0    13    77   130   193   123   235 0.70 PhoH-like protein
AAA_5                PF07728.9    139 sp|P25953|COMGA_BACSU -            356     0.032   13.9   0.0   1   1   0.00013     0.065   12.9   0.0     2    79   140   222   139   248 0.77 AAA domain (dynein-related subfamily)
AAA_25               PF13481.1    194 sp|P25953|COMGA_BACSU -            356     0.037   13.4   0.1   1   1   0.00013     0.065   12.6   0.1    33   118   137   238   128   266 0.66 AAA domain
Pox_A32              PF04665.7    241 sp|P25953|COMGA_BACSU -            356     0.045   13.0   0.0   1   1   0.00018     0.093   12.0   0.0    12    44   136   169   130   183 0.79 Poxvirus A32 protein
ATP_bind_1           PF03029.12   238 sp|P25953|COMGA_BACSU -            356     0.047   13.2   0.0   1   1   0.00021      0.11   12.0   0.0     2    32   143   172   142   190 0.86 Conserved hypothetical ATP binding protein
Rad17                PF03215.10   519 sp|P25953|COMGA_BACSU -            356     0.058   12.0   0.0   1   1   0.00018     0.092   11.4   0.0    40    87   133   177   125   199 0.66 Rad17 cell cycle checkpoint protein
RNA_helicase         PF00910.17   107 sp|P25953|COMGA_BACSU -            356     0.094   12.9   0.0   1   1   0.00046      0.24   11.6   0.0     2    27   141   166   140   196 0.86 RNA helicase
AAA_11               PF13086.1    236 sp|P25953|COMGA_BACSU -            356     0.094   12.2   0.0   1   1   0.00025      0.13   11.8   0.0    12    44   131   171   124   333 0.71 AAA domain
FtsK_SpoIIIE         PF01580.13   205 sp|P25953|COMGA_BACSU -            356      0.11   11.9   0.0   1   1   0.00039       0.2   11.0   0.0    28    60   126   159   104   195 0.81 FtsK/SpoIIIE family
NACHT                PF05729.7    166 sp|P25953|COMGA_BACSU -            356      0.13   11.8   0.0   1   1   0.00057      0.29   10.7   0.0     3    27   140   164   138   169 0.88 NACHT domain
T2SF                 PF00482.18   124 sp|P25954|COMGB_BACSU -            323   4.8e-33  113.7   7.0   1   2   1.1e-13   5.7e-10   39.1   0.2     8   124     1   114     1   114 0.97 Type II secretion system (T2SS), protein F
T2SF                 PF00482.18   124 sp|P25954|COMGB_BACSU -            323   4.8e-33  113.7   7.0   2   2   5.2e-26   2.6e-22   79.0   0.1     1   124   193   315   193   315 0.97 Type II secretion system (T2SS), protein F
UPF0114              PF03350.11   124 sp|P25954|COMGB_BACSU -            323    0.0083   16.0   3.2   1   1   1.7e-06    0.0083   16.0   3.2    12    82    95   164    87   190 0.72 Uncharacterized protein family, UPF0114
N_methyl_2           PF13544.1     31 sp|P25955|COMGC_BACSU -             98   2.2e-07   30.0   1.9   1   1   1.5e-10   3.6e-07   29.3   1.9    12    31     2    21     1    21 0.94 Type IV pilin N-term methylation site GFxxxE
N_methyl             PF07963.7     20 sp|P25955|COMGC_BACSU -             98   3.7e-07   29.5   5.3   1   1   2.3e-10   5.8e-07   28.8   5.3     1    20     4    23     4    23 0.95 Prokaryotic N-terminal methylation motif
N_methyl_3           PF13633.1     22 sp|P25955|COMGC_BACSU -             98   0.00036   20.1   7.4   1   1   2.1e-07   0.00052   19.6   7.4     1    22     6    27     6    27 0.94 Prokaryotic N-terminal methylation site
DUF1980              PF09323.5    182 sp|P25955|COMGC_BACSU -             98     0.032   13.9   0.0   1   1   1.4e-05     0.034   13.9   0.0    75   139    11    78     2    96 0.67 Domain of unknown function (DUF1980)
SecD-TM1             PF13721.1    101 sp|P25955|COMGC_BACSU -             98     0.038   14.2   0.0   1   1   1.7e-05     0.043   14.0   0.0     9    49    11    51     4    80 0.74 SecD export protein N-terminal TM region
ATP-synt_8           PF00895.15    54 sp|P25955|COMGC_BACSU -             98     0.051   13.7   0.5   1   1   2.8e-05     0.069   13.3   0.5    11    35    12    37     8    57 0.83 ATP synthase protein 8
E1-E2_ATPase         PF00122.15   230 sp|O32220|COPA_BACSU -            802   8.9e-63  211.3   0.3   1   1   9.7e-66   1.6e-62  210.5   0.3     2   229   268   488   267   489 0.98 E1-E2 ATPase
Hydrolase            PF00702.21   215 sp|O32220|COPA_BACSU -            802   6.3e-51  173.8   7.3   1   1   7.3e-54   1.2e-50  172.9   7.3     2   215   494   710   493   710 0.92 haloacid dehalogenase-like hydrolase
HMA                  PF00403.21    62 sp|O32220|COPA_BACSU -            802   2.6e-37  126.7   0.9   1   2   6.4e-21   1.1e-17   63.9   0.0     2    62     9    69     8    69 0.97 Heavy-metal-associated domain
HMA                  PF00403.21    62 sp|O32220|COPA_BACSU -            802   2.6e-37  126.7   0.9   2   2   7.8e-20   1.3e-16   60.4   0.2     2    62    77   137    76   137 0.98 Heavy-metal-associated domain
HAD                  PF12710.2    192 sp|O32220|COPA_BACSU -            802   7.2e-15   55.6   0.0   1   1   9.3e-18   1.5e-14   54.5   0.0     1   191   496   706   496   707 0.64 haloacid dehalogenase-like hydrolase
Hydrolase_3          PF08282.7    254 sp|O32220|COPA_BACSU -            802   9.8e-07   28.5   3.1   2   2   2.4e-07   0.00039   20.0   0.8   197   254   685   742   678   742 0.91 haloacid dehalogenase-like hydrolase
YscJ_FliF            PF01514.12   207 sp|O32220|COPA_BACSU -            802   0.00047   19.3   0.0   2   2   0.00046      0.76    8.8   0.0   114   154    85   124    75   129 0.82 Secretory protein of YscJ/FliF family
DUF3021              PF11457.3    136 sp|O32220|COPA_BACSU -            802       5.7    6.8   9.2   1   1   0.00046      0.76    9.6   4.0    61   108   161   209   158   219 0.85 Protein of unknown function (DUF3021)
CorA                 PF01544.13   292 sp|P40948|CORA_BACSU -            317   2.4e-33  115.4   3.2   1   1     2e-37   2.9e-33  115.1   3.2    42   292    48   294    16   294 0.87 CorA-like Mg2+ transporter protein
CotE                 PF10628.4    182 sp|P14016|COTE_BACSU -            181   2.9e-90  300.5   8.2   1   1   2.2e-94   3.2e-90  300.3   8.2     1   181     1   180     1   181 0.98 Outer spore coat protein E (CotE)
Coat_F               PF07875.7     64 sp|P23261|COTF_BACSU -            160     4e-28   97.3   0.3   2   2   6.2e-29   4.6e-25   87.5   0.2     6    64    83   141    77   141 0.95 Coat F domain
DUF2383              PF09537.5    111 sp|P23261|COTF_BACSU -            160    0.0026   17.9   0.1   1   2   2.7e-05       0.2   11.9   0.0    12    54    21    63    11    75 0.80 Domain of unknown function (DUF2383)
CotH                 PF08757.6    323 sp|Q45535|COTH_BACSU -            362   4.8e-83  279.0   6.4   1   1   3.7e-87   5.5e-83  278.8   6.4     1   323    47   355    47   355 0.99 CotH protein
APH                  PF01636.18   239 sp|O34656|COTI_BACSU -            357   6.1e-15   55.5   0.0   1   1   1.7e-18   8.3e-15   55.1   0.0     5   228    51   297    47   307 0.71 Phosphotransferase enzyme family
Choline_kinase       PF01633.15   211 sp|O34656|COTI_BACSU -            357   0.00011   21.8   0.0   1   1   6.5e-08   0.00032   20.3   0.0    48   168   120   257   117   318 0.65 Choline/ethanolamine kinase
EcKinase             PF02958.15   294 sp|O34656|COTI_BACSU -            357    0.0038   16.4   0.0   1   1   1.4e-06     0.007   15.5   0.0   115   281   135   296   129   308 0.73 Ecdysteroid kinase
Mn_catalase          PF05067.7    284 sp|Q45538|COTJC_BACSU -            189   8.3e-80  267.5   0.1   1   1   1.7e-83   1.3e-79  266.9   0.1     1   199     1   184     1   188 0.98 Manganese containing catalase
Rubrerythrin         PF02915.12   137 sp|Q45538|COTJC_BACSU -            189    0.0011   19.2   0.3   1   1   5.7e-06     0.042   14.1   0.1     9   136    34   175    31   176 0.80 Rubrerythrin
Peptidase_M73        PF12389.3    199 sp|P54507|COTN_BACSU -            261   1.7e-30  105.9  12.8   1   2   1.2e-32   8.7e-29  100.4   3.4     4   139     2   141     1   158 0.78 Camelysin metallo-endopeptidase
Peptidase_M73        PF12389.3    199 sp|P54507|COTN_BACSU -            261   1.7e-30  105.9  12.8   2   2   3.2e-05      0.24   10.8   2.0   160   196   192   235   167   238 0.76 Camelysin metallo-endopeptidase
YSIRK_signal         PF04650.12    27 sp|P54507|COTN_BACSU -            261       0.1   12.1   3.0   1   1   2.4e-05      0.18   11.4   3.0    11    27     6    22     5    22 0.93 YSIRK type signal peptide
HSP20                PF00011.16   102 sp|P96698|COTP_BACSU -            143   2.1e-08   33.9   0.0   1   1     2e-12     3e-08   33.4   0.0     7    91    50   136    45   141 0.85 Hsp20/alpha crystallin family
Glycos_transf_1      PF00534.15   172 sp|P46915|COTSA_BACSU -            377   2.1e-45  154.2   0.0   1   1   1.2e-48   3.4e-45  153.5   0.0     3   171   180   354   178   355 0.93 Glycosyl transferases group 1
Glyco_trans_1_4      PF13692.1    135 sp|P46915|COTSA_BACSU -            377   1.3e-19   70.7   0.0   2   2   1.9e-22   5.6e-19   68.6   0.0     4   134   193   340   190   341 0.86 Glycosyl transferases group 1
Glyco_trans_1_2      PF13524.1     92 sp|P46915|COTSA_BACSU -            377   1.3e-12   47.7   0.1   1   1   1.5e-15   4.3e-12   46.1   0.0     9    91   285   370   275   371 0.91 Glycosyl transferases group 1
Glyco_transf_4       PF13439.1    177 sp|P46915|COTSA_BACSU -            377   5.6e-07   29.4   0.1   1   1   5.4e-10   1.6e-06   27.9   0.1    12   176    18   167     6   168 0.87 Glycosyltransferase Family 4
Glyco_trans_4_4      PF13579.1    160 sp|P46915|COTSA_BACSU -            377   0.00017   21.7   0.0   1   1   1.9e-07   0.00058   20.0   0.0     1   156    18   157    18   161 0.73 Glycosyl transferase 4-like domain
COX1                 PF00115.15   447 sp|P24010|COX1_BACSU -            622  2.7e-162  540.4  70.4   1   2  3.7e-166  2.7e-162  540.4  70.4     1   447    24   471    24   471 0.99 Cytochrome C and Quinol oxidase polypeptide I
DUF3188              PF11384.3     49 sp|P24010|COX1_BACSU -            622      0.98    9.0   7.1   2   2   4.2e-05      0.32   10.6   1.9     4    43   557   598   557   599 0.93 Protein of unknown function (DUF3188)
COX2                 PF00116.15   120 sp|P24011|COX2_BACSU -            356   8.7e-13   48.1   0.1   1   1   1.9e-14   1.7e-11   43.9   0.1    44   118   153   233   131   235 0.85 Cytochrome C oxidase subunit II, periplasmic domain
Cytochrom_C          PF00034.16    91 sp|P24011|COX2_BACSU -            356   1.4e-10   41.8   0.1   1   1   2.7e-13   2.3e-10   41.1   0.1     1    91   259   352   259   352 0.90 Cytochrome c
COX2_TM              PF02790.10    84 sp|P24011|COX2_BACSU -            356   2.3e-07   30.6   2.5   1   1   4.8e-10   4.2e-07   29.8   2.5    28    80    47   106    29   108 0.80 Cytochrome C oxidase subunit II, transmembrane domain
Cytochrome_CBB3      PF13442.1     67 sp|P24011|COX2_BACSU -            356   5.4e-06   26.4   0.0   1   1   1.1e-08   9.3e-06   25.7   0.0     2    67   258   348   257   348 0.69 Cytochrome C oxidase, cbb3-type, subunit III
DUF898               PF05987.8    339 sp|P24011|COX2_BACSU -            356    0.0039   16.1   0.9   1   1   5.5e-06    0.0048   15.8   0.9   184   293     3   115     1   139 0.76 Bacterial protein of unknown function (DUF898)
CopD                 PF05425.8    105 sp|P24011|COX2_BACSU -            356     0.019   15.1   2.8   1   1   3.3e-05     0.029   14.5   2.8     4   101     2   104     1   109 0.70 Copper resistance protein D
Paired_CXXCH_1       PF09699.5     41 sp|P24011|COX2_BACSU -            356     0.058   12.9   0.1   1   1   0.00014      0.12   11.8   0.1     4    26   266   288   264   293 0.79 Doubled CXXCH motif (Paired_CXXCH_1)
Cytochrome_C554      PF13435.1    130 sp|P24011|COX2_BACSU -            356     0.067   13.2   0.8   1   1   0.00012       0.1   12.6   0.8    21    66   242   286   221   311 0.62 Cytochrome c554 and c-prime
DUF236               PF03057.9    141 sp|P24011|COX2_BACSU -            356      0.12   12.2   0.8   1   1   0.00023       0.2   11.5   0.8    50   128   249   321   231   325 0.80 Protein of unknown function
LPAM_1               PF08139.7     25 sp|P24011|COX2_BACSU -            356      0.18   12.1   1.0   1   1   0.00059      0.51   10.6   1.0     7    23     5    21     1    21 0.92 Prokaryotic membrane lipoprotein lipid attachment site
HemY_N               PF07219.8    108 sp|P24011|COX2_BACSU -            356      0.25   10.9   2.0   1   2   0.00078      0.68    9.5   0.3     7    40    35    68    34    80 0.85 HemY protein N-terminus
DUF2681              PF10883.3     87 sp|P24011|COX2_BACSU -            356      0.25   11.5   0.1   1   1   0.00028      0.25   11.5   0.1     4    37    48    80    45    90 0.80 Protein of unknown function (DUF2681)
DUF912               PF06024.7    101 sp|P24011|COX2_BACSU -            356       1.6    8.8  13.9   1   2   0.00013      0.11   12.5   4.9    58    94    37    73    27    82 0.83 Nucleopolyhedrovirus protein of unknown function (DUF912)
Cytochrom_NNT        PF03264.9    174 sp|P24011|COX2_BACSU -            356       2.5    7.4   6.8   1   1   0.00023       0.2   11.0   0.6    74   147   223   290   201   306 0.73 NapC/NirT cytochrome c family, N-terminal region
COX3                 PF00510.13   258 sp|P24012|COX3_BACSU -            207   2.2e-23   83.0  16.7   1   1   4.4e-27   3.3e-23   82.4  16.7    78   257    28   204    17   205 0.88 Cytochrome c oxidase subunit III
COX4_pro             PF03626.9     75 sp|P24013|COX4_BACSU -            110   5.8e-13   48.7  13.8   1   1     2e-16   7.3e-13   48.4  13.8     2    74    29   108    28   109 0.85 Prokaryotic Cytochrome C oxidase subunit IV
DUF1422              PF07226.6    118 sp|P24013|COX4_BACSU -            110   0.00039   20.1   2.6   1   1   1.4e-07    0.0005   19.7   2.6     6    78    24    96    17   108 0.82 Protein of unknown function (DUF1422)
DUF3816              PF12822.2    172 sp|P24013|COX4_BACSU -            110      0.21   11.4  11.7   1   1     7e-05      0.26   11.1  11.7    46   126    32   109    30   110 0.83 Protein of unknown function (DUF3816)
Arif-1               PF06770.6    197 sp|P24013|COX4_BACSU -            110      0.34   10.2   4.1   1   2   2.2e-05      0.08   12.2   0.7    30   103    14    83     6    88 0.71 Actin-rearrangement-inducing factor (Arif-1)
UbiA                 PF01040.13   257 sp|O31652|COXX1_BACSU -            320   1.8e-32  112.6  23.0   1   1   1.6e-36   2.3e-32  112.2  23.0     6   254    41   302    36   311 0.90 UbiA prenyltransferase family
UbiA                 PF01040.13   257 sp|P24009|COXX2_BACSU -            305   1.3e-33  116.3  25.6   1   1   1.2e-37   1.7e-33  115.9  25.6     6   254    39   291    36   298 0.74 UbiA prenyltransferase family
p450                 PF00067.17   463 sp|O08469|CPXY_BACSU -            410     5e-36  124.2   5.1   1   1   3.9e-36   5.8e-32  110.8   5.1    65   454    76   400    15   408 0.82 Cytochrome P450
CRCB                 PF02537.10   117 sp|O07590|CRCB1_BACSU -            118   4.1e-28   97.6  16.7   1   1   3.1e-32   4.6e-28   97.4  16.7     3   116     5   114     3   115 0.93 CrcB-like protein
CRCB                 PF02537.10   117 sp|O07591|CRCB2_BACSU -            131   7.6e-27   93.5  13.0   1   1   5.9e-31   8.7e-27   93.3  13.0     2   116     5   113     4   114 0.93 CrcB-like protein
PTS-HPr              PF00381.14    84 sp|O06976|CRH_BACSU  -             85   5.2e-34  115.9   0.6   1   1   3.9e-38   5.7e-34  115.8   0.6     1    83     1    83     1    84 0.98 PTS HPr component phosphorylation site
Glycos_transf_2      PF00535.21   169 sp|Q45539|CSBB_BACSU -            329   4.2e-31  107.8   0.3   1   1   1.3e-34   6.3e-31  107.3   0.3     1   166     7   167     7   170 0.91 Glycosyl transferase family 2
Glyco_tranf_2_3      PF13641.1    228 sp|Q45539|CSBB_BACSU -            329   3.4e-09   36.8   0.0   1   1   8.9e-13   4.4e-09   36.4   0.0     3   120     6   120     3   164 0.83 Glycosyltransferase like family 2
Glyco_tranf_2_2      PF10111.4    281 sp|Q45539|CSBB_BACSU -            329   1.4e-05   24.3   0.1   1   1     4e-09     2e-05   23.8   0.1     1   111     7   110     7   123 0.86 Glycosyltransferase like family 2
Sugar_tr             PF00083.19   451 sp|P46333|CSBC_BACSU -            461    1e-120  403.4  36.1   1   1  3.9e-124  1.1e-120  403.2  36.1     3   449    12   439    10   441 0.94 Sugar (and other) transporter
MFS_1                PF07690.11   352 sp|P46333|CSBC_BACSU -            461   2.9e-42  144.6  60.8   1   2   5.7e-35   1.7e-31  109.2  33.3     2   319    15   355    14   359 0.85 Major Facilitator Superfamily
MFS_1                PF07690.11   352 sp|P46333|CSBC_BACSU -            461   2.9e-42  144.6  60.8   2   2   8.7e-17   2.6e-13   49.4  19.5    46   188   291   440   287   459 0.83 Major Facilitator Superfamily
MFS_2                PF13347.1    428 sp|P46333|CSBC_BACSU -            461   2.4e-11   42.6  40.6   1   3   8.2e-10   2.4e-06   26.2   5.4   234   343    18   125     4   129 0.89 MFS/sugar transport protein
MFS_2                PF13347.1    428 sp|P46333|CSBC_BACSU -            461   2.4e-11   42.6  40.6   2   3   6.6e-05       0.2   10.0  17.5   138   342   131   366   127   369 0.72 MFS/sugar transport protein
MFS_2                PF13347.1    428 sp|P46333|CSBC_BACSU -            461   2.4e-11   42.6  40.6   3   3   2.7e-09   8.1e-06   24.4  19.0     7   220   246   447   242   455 0.82 MFS/sugar transport protein
TRI12                PF06609.8    599 sp|P46333|CSBC_BACSU -            461   1.9e-06   26.3   6.1   1   2   6.5e-10   1.9e-06   26.3   6.1    79   225    45   190    27   203 0.74 Fungal trichothecene efflux pump (TRI12)
DUF3278              PF11683.3    129 sp|P46333|CSBC_BACSU -            461     0.014   15.4   0.5   3   3   4.6e-06     0.014   15.4   0.5    40   112   384   455   375   458 0.72 Protein of unknown function (DUF3278)
CsbD                 PF05532.7     53 sp|P70964|CSBD_BACSU -             62   1.2e-16   60.0  15.9   1   1   1.9e-20   1.4e-16   59.8  15.9     1    53     8    60     8    60 0.98 CsbD-like
ISG65-75             PF11727.3    286 sp|P70964|CSBD_BACSU -             62     0.012   14.7   6.4   1   1   1.7e-06     0.013   14.6   6.4    94   146     3    56     2    62 0.93 Invariant surface glycoprotein
MFS_1                PF07690.11   352 sp|O05390|CSBX_BACSU -            435   2.7e-31  108.5  68.7   1   2   2.8e-23   1.4e-19   70.0  32.0    19   273    41   292    14   293 0.83 Major Facilitator Superfamily
MFS_1                PF07690.11   352 sp|O05390|CSBX_BACSU -            435   2.7e-31  108.5  68.7   2   2   6.3e-18   3.1e-14   52.4  28.7     6   175   237   409   233   430 0.86 Major Facilitator Superfamily
Sugar_tr             PF00083.19   451 sp|O05390|CSBX_BACSU -            435   0.00059   18.5  17.0   2   2   1.2e-07   0.00059   18.5  17.0   240   436   212   406   197   413 0.80 Sugar (and other) transporter
MFS_1_like           PF12832.2     77 sp|O05390|CSBX_BACSU -            435      0.13   12.1   0.1   2   4   2.5e-05      0.13   12.1   0.1    22    72   249   299   249   303 0.93 MFS_1 like family
DEAD                 PF00270.24   169 sp|P96614|CSHA_BACSU -            494   4.4e-47  159.7   0.1   1   2   4.6e-50   1.4e-46  158.1   0.0     1   168    27   192    27   193 0.95 DEAD/DEAH box helicase
Helicase_C           PF00271.26    78 sp|P96614|CSHA_BACSU -            494   5.9e-26   90.1   0.0   1   1   5.4e-29   1.6e-25   88.7   0.0     3    78   261   336   259   336 0.97 Helicase conserved C-terminal domain
ResIII               PF04851.10   184 sp|P96614|CSHA_BACSU -            494   6.1e-05   22.9   0.4   1   3   2.2e-06    0.0065   16.3   0.0    27   181    42   185    17   188 0.66 Type III restriction enzyme, res subunit
Helicase_RecD        PF05127.9    177 sp|P96614|CSHA_BACSU -            494    0.0012   18.5   0.2   1   2   1.1e-05     0.034   13.8   0.0     4   100    47   155    44   188 0.73 Helicase
CMS1                 PF14617.1    252 sp|P96614|CSHA_BACSU -            494     0.033   13.2   0.0   1   1   1.1e-05     0.033   13.2   0.0   126   209    69   153    59   175 0.76 U3-containing 90S pre-ribosomal complex subunit
DEAD                 PF00270.24   169 sp|P54475|CSHB_BACSU -            438     3e-43  147.2   0.6   1   2   6.7e-45   1.2e-41  141.9   0.3     1   167    28   195    28   197 0.94 DEAD/DEAH box helicase
Helicase_C           PF00271.26    78 sp|P54475|CSHB_BACSU -            438   1.1e-23   82.8   0.0   1   1   1.2e-26   2.2e-23   81.9   0.0     2    78   264   340   263   340 0.98 Helicase conserved C-terminal domain
CMS1                 PF14617.1    252 sp|P54475|CSHB_BACSU -            438     0.001   18.1   0.0   1   1   5.6e-07     0.001   18.1   0.0   181   209   129   157   115   161 0.90 U3-containing 90S pre-ribosomal complex subunit
Helicase_RecD        PF05127.9    177 sp|P54475|CSHB_BACSU -            438    0.0012   18.5   0.0   1   1   1.6e-06    0.0029   17.2   0.0     5   100    49   159    46   191 0.72 Helicase
AAA_30               PF13604.1    196 sp|P54475|CSHB_BACSU -            438    0.0021   17.6   0.0   1   1   2.5e-06    0.0047   16.5   0.0     6   104    31   160    28   166 0.70 AAA domain
ResIII               PF04851.10   184 sp|P54475|CSHB_BACSU -            438    0.0075   16.1   0.1   2   2     4e-06    0.0075   16.1   0.1     8    75    31    97    24   192 0.70 Type III restriction enzyme, res subunit
PhoH                 PF02562.11   205 sp|P54475|CSHB_BACSU -            438     0.011   14.9   0.1   1   1   1.2e-05     0.022   13.9   0.1     6    62    28    85    25   106 0.81 PhoH-like protein
AAA_22               PF13401.1    131 sp|P54475|CSHB_BACSU -            438     0.016   15.3   0.0   1   1     3e-05     0.055   13.6   0.0    12   105    49   167    41   190 0.78 AAA domain
Trns_repr_metal      PF02583.12    85 sp|O32222|CSOR_BACSU -            101   4.7e-33  113.2   1.8   1   1   1.2e-36   5.8e-33  112.9   1.8     2    85    16    98    15    98 0.98 Metal-sensitive transcriptional repressor
ARA70                PF12489.3    132 sp|O32222|CSOR_BACSU -            101     0.076   12.9   0.1   1   1   1.7e-05     0.086   12.8   0.1    32    97    10    69     3    89 0.83 Nuclear coactivator
Endotoxin_N          PF03945.9    226 sp|O32222|CSOR_BACSU -            101       0.1   11.9   0.0   1   1   2.3e-05      0.11   11.8   0.0    90   175    11    99     2   101 0.83 delta endotoxin, N-terminal domain
CsrA                 PF02599.11    54 sp|P33911|CSRA_BACSU -             74   7.4e-26   89.6   2.8   1   1   1.2e-29   8.8e-26   89.3   2.8     1    54     1    54     1    54 0.99 Global regulator protein family
S1                   PF00575.18    74 sp|P33911|CSRA_BACSU -             74     0.016   15.2   0.5   1   2   6.3e-06     0.047   13.7   0.3    43    65     6    28     3    35 0.88 S1 RNA binding domain
CstA                 PF02554.9    376 sp|P94532|CSTA_BACSU -            598  2.2e-137  457.6  22.0   1   2    3e-141  2.2e-137  457.6  22.0     1   358     1   362     1   384 0.96 Carbon starvation protein CstA
DUF4161              PF13722.1    127 sp|P94532|CSTA_BACSU -            598   8.9e-41  139.1   2.7   1   2   1.2e-44   8.9e-41  139.1   2.7     4   126   415   537   412   538 0.97 C-terminal domain on CstA (DUF4161)
COX15-CtaA           PF02628.10   302 sp|P12946|CTAA_BACSU -            306   4.4e-54  183.4  26.4   1   1   6.9e-58   5.1e-54  183.1  26.4     3   301     8   289     6   290 0.90 Cytochrome oxidase assembly protein
Ribosomal_TL5_C      PF14693.1     88 sp|P14194|CTC_BACSU  -            204   2.6e-26   91.6   2.1   2   2   1.5e-29   4.4e-26   90.9   0.4     1    88    97   184    97   184 0.98 Ribosomal protein TL5, C-terminal domain
Ribosomal_L25p       PF01386.14    88 sp|P14194|CTC_BACSU  -            204   2.9e-25   88.1   0.0   1   1   1.6e-28   4.9e-25   87.4   0.0     1    88     4    90     4    90 0.99 Ribosomal L25p family
RNA_pol_A_bac        PF01000.21   112 sp|P14194|CTC_BACSU  -            204     0.058   13.5   0.1   1   1     4e-05      0.12   12.5   0.1    46    99    52   106    32   111 0.85 RNA polymerase Rpb3/RpoA insert domain
Spore_GerAC          PF05504.6    171 sp|P14194|CTC_BACSU  -            204     0.077   12.7   0.1   1   1   3.5e-05       0.1   12.3   0.1    19    78    43   109    38   147 0.72 Spore germination B3/ GerAC like, C-terminal
Chordopox_A35R       PF05989.7    176 sp|P14194|CTC_BACSU  -            204     0.084   12.4   0.0   1   1   3.6e-05      0.11   12.1   0.0    37   142    55   166    40   179 0.85 Chordopoxvirus A35R protein
Peptidase_S41        PF03572.13   169 sp|O34666|CTPA_BACSU -            466     5e-50  169.1   0.6   1   1     6e-53   1.3e-49  167.9   0.6     1   168   201   362   201   363 0.94 Peptidase family S41
PDZ                  PF00595.19    81 sp|O34666|CTPA_BACSU -            466   1.4e-14   54.0   1.8   1   1   1.7e-17   3.7e-14   52.6   1.8     8    80   102   171    97   172 0.91 PDZ domain (Also known as DHR or GLGF)
PDZ_2                PF13180.1     82 sp|O34666|CTPA_BACSU -            466   2.4e-12   46.5   1.2   1   3   1.2e-15   2.4e-12   46.5   1.2     2    73   105   175   104   184 0.87 PDZ domain
PG_binding_1         PF01471.13    57 sp|O34666|CTPA_BACSU -            466   1.4e-10   41.0   1.3   1   1   1.4e-13     3e-10   39.9   0.5     2    57   386   440   385   440 0.94 Putative peptidoglycan binding domain
DUF3394              PF11874.3    183 sp|O34666|CTPA_BACSU -            466     0.009   15.5   1.2   1   3   4.7e-05       0.1   12.1   0.1    66   150    60   143    42   176 0.72 Domain of unknown function (DUF3394)
Bac_rhamnosid        PF05592.6    509 sp|O34666|CTPA_BACSU -            466      0.32    9.1   7.0   3   3   1.1e-05     0.023   12.9   0.8   285   359   390   465   386   466 0.92 Bacterial alpha-L-rhamnosidase
Peptidase_S41        PF03572.13   169 sp|O35002|CTPB_BACSU -            480   9.3e-49  165.0   0.1   1   1   1.3e-51   2.4e-48  163.7   0.1     2   169   214   375   213   375 0.96 Peptidase family S41
PDZ_2                PF13180.1     82 sp|O35002|CTPB_BACSU -            480   1.8e-14   53.3   1.7   1   1   1.3e-17   2.5e-14   52.9   0.1     2    80   113   190   112   192 0.91 PDZ domain
PG_binding_1         PF01471.13    57 sp|O35002|CTPB_BACSU -            480   7.8e-13   48.1   0.2   2   2   4.7e-15   8.7e-12   44.8   0.1     2    57   398   453   397   453 0.96 Putative peptidoglycan binding domain
PDZ                  PF00595.19    81 sp|O35002|CTPB_BACSU -            480   1.7e-12   47.3   0.5   1   1   2.5e-15   4.7e-12   45.9   0.5     8    81   110   180   102   180 0.92 PDZ domain (Also known as DHR or GLGF)
DUF4292              PF14125.1    210 sp|O35002|CTPB_BACSU -            480    0.0023   17.4   0.4   1   1     3e-06    0.0056   16.1   0.4    69   149   380   465   377   471 0.82 Domain of unknown function (DUF4292)
DUF3394              PF11874.3    183 sp|O35002|CTPB_BACSU -            480     0.016   14.7   0.0   1   1     2e-05     0.037   13.5   0.0    54   152    52   153    48   160 0.78 Domain of unknown function (DUF3394)
CtsR                 PF05848.6    152 sp|P37568|CTSR_BACSU -            154   2.5e-64  215.8   5.2   1   1     4e-68     3e-64  215.6   5.2     2   151     3   152     2   153 0.99 Firmicute transcriptional repressor of class III stress genes (CtsR)
NdhN                 PF11909.3    154 sp|P37568|CTSR_BACSU -            154     0.084   12.2   0.1   2   2   3.2e-05      0.24   10.7   0.1    82   130    80   126    72   132 0.75 NADH-quinone oxidoreductase cyanobacterial subunit N
Amidase_2            PF01510.20   132 sp|P24808|CWLA_BACSU -            272   2.1e-23   82.8   0.7   1   1   9.6e-27   4.8e-23   81.6   0.7     4   131    20   143    18   144 0.87 N-acetylmuramoyl-L-alanine amidase
PG_binding_1         PF01471.13    57 sp|P24808|CWLA_BACSU -            272   4.9e-19   68.0   0.2   2   2   4.1e-22     2e-18   66.0   0.1     1    57   205   267   205   267 0.91 Putative peptidoglycan binding domain
Amidase_3            PF01520.13   175 sp|Q06320|CWLC_BACSU -            255   4.8e-46  156.7   0.0   1   2   1.8e-49   8.9e-46  155.8   0.0     1   174     4   172     4   173 0.97 N-acetylmuramoyl-L-alanine amidase
SPOR                 PF05036.8     76 sp|Q06320|CWLC_BACSU -            255   2.6e-18   65.9   0.5   1   1   1.1e-21   5.6e-18   64.8   0.5     2    75   183   252   182   253 0.97 Sporulation related domain
TBPIP_N              PF15517.1     99 sp|Q06320|CWLC_BACSU -            255     0.057   13.0   0.1   1   2   5.7e-05      0.28   10.8   0.0    39    81   186   229   172   239 0.88 TBP-interacting protein N-terminus
Amidase_3            PF01520.13   175 sp|P50864|CWLD_BACSU -            237   3.1e-49  167.1   0.0   1   1   4.8e-53   3.5e-49  166.9   0.0     1   174    43   226    43   227 0.98 N-acetylmuramoyl-L-alanine amidase
PdxJ                 PF03740.8    239 sp|P50864|CWLD_BACSU -            237     0.009   15.1   0.0   1   1   1.6e-06     0.012   14.7   0.0    86   183    83   177    61   184 0.77 Pyridoxal phosphate biosynthesis protein PdxJ
Amidase_2            PF01510.20   132 sp|P54450|CWLH_BACSU -            250     1e-25   90.2   0.4   1   1     3e-29   1.5e-25   89.7   0.4     2   131    16   142    15   143 0.90 N-acetylmuramoyl-L-alanine amidase
PG_binding_1         PF01471.13    57 sp|P54450|CWLH_BACSU -            250   2.1e-16   59.5   0.3   2   2   1.2e-19     6e-16   58.1   0.1     2    57   184   245   183   245 0.90 Putative peptidoglycan binding domain
Hydrolase_2          PF07486.7    108 sp|P42249|CWLJ_BACSU -            142   8.7e-25   87.3   0.1   1   1     7e-29     1e-24   87.0   0.1     1   108    23   129    23   129 0.95 Cell Wall Hydrolase
VanY                 PF02557.12   132 sp|O34360|CWLK_BACSU -            167   5.4e-24   84.5   0.1   1   1   1.4e-27   6.9e-24   84.1   0.1     3   106    42   147    40   161 0.90 D-alanyl-D-alanine carboxypeptidase
Peptidase_M15_4      PF13539.1     67 sp|O34360|CWLK_BACSU -            167   1.3e-16   60.7   0.9   1   1   5.5e-20   2.7e-16   59.7   0.9     4    67    97   164    94   164 0.77 D-alanyl-D-alanine carboxypeptidase
Ribosomal_L2         PF00181.18    77 sp|O34360|CWLK_BACSU -            167    0.0063   16.4   0.4   1   1     2e-06    0.0099   15.8   0.4     1    48    84   131    84   132 0.88 Ribosomal Proteins L2, RNA binding domain
NLPC_P60             PF00877.14   105 sp|P40767|CWLO_BACSU -            473   1.4e-29  101.9   0.1   1   1   2.7e-32   3.6e-29  100.6   0.1     2   105   357   469   355   469 0.94 NlpC/P60 family
IncA                 PF04156.9    191 sp|P40767|CWLO_BACSU -            473   6.4e-05   22.6  15.4   1   2   4.7e-08   6.4e-05   22.6  15.4    41   170     8   128     4   140 0.77 IncA protein
EzrA                 PF06160.7    560 sp|P40767|CWLO_BACSU -            473   0.00018   19.8  17.6   1   2   1.4e-07   0.00018   19.8  17.6   342   434    26   118    19   119 0.97 Septation ring formation regulator, EzrA
ATG16                PF08614.6    194 sp|P40767|CWLO_BACSU -            473    0.0038   17.0  21.8   1   2   2.8e-06    0.0038   17.0  21.8    56   147    38   129    23   131 0.83 Autophagy protein 16 (ATG16)
DUF4200              PF13863.1    126 sp|P40767|CWLO_BACSU -            473    0.0063   16.4  30.6   1   2   4.6e-06    0.0063   16.4  30.6    14   105    31   122    27   129 0.95 Domain of unknown function (DUF4200)
Myosin_tail_1        PF01576.14   859 sp|P40767|CWLO_BACSU -            473     0.071   10.8  61.3   2   2     8e-05      0.11   10.2  29.9   149   263   170   287   154   318 0.79 Myosin tail
Reo_sigmaC           PF04582.7    326 sp|P40767|CWLO_BACSU -            473       7.7    5.5  27.3   1   2   9.2e-05      0.12   11.4   1.7    61   156    33   133    19   141 0.65 Reovirus sigma C capsid protein
LysM                 PF01476.15    44 sp|O31852|CWLS_BACSU -            414   5.7e-58  192.5   9.1   1   4   1.4e-15   1.9e-12   46.8   0.1     2    44    30    71    29    71 0.98 LysM domain
LysM                 PF01476.15    44 sp|O31852|CWLS_BACSU -            414   5.7e-58  192.5   9.1   2   4     9e-16   1.2e-12   47.4   0.0     1    43    90   131    90   132 0.98 LysM domain
LysM                 PF01476.15    44 sp|O31852|CWLS_BACSU -            414   5.7e-58  192.5   9.1   3   4   8.3e-16   1.1e-12   47.5   0.1     1    43   159   200   159   201 0.98 LysM domain
LysM                 PF01476.15    44 sp|O31852|CWLS_BACSU -            414   5.7e-58  192.5   9.1   4   4   8.8e-18   1.2e-14   53.9   0.2     1    44   227   269   227   269 0.98 LysM domain
NLPC_P60             PF00877.14   105 sp|O31852|CWLS_BACSU -            414   1.3e-29  102.1   0.6   1   1   2.9e-32   3.9e-29  100.5   0.1     1   104   311   411   311   412 0.95 NlpC/P60 family
OapA                 PF04225.7     85 sp|O31852|CWLS_BACSU -            414   0.00012   21.9   2.4   2   4   0.00045       0.6   10.0   0.0     3    53    88   133    86   139 0.83 Opacity-associated protein A LysM-like domain
TRAPPC10             PF12584.3    147 sp|O31852|CWLS_BACSU -            414    0.0013   18.2   0.9   1   3   0.00037       0.5    9.8   0.1    30    82    65   110    41   123 0.70 Trafficking protein particle complex subunit 10, TRAPPC10
LRAT                 PF04970.8    126 sp|O31852|CWLS_BACSU -            414      0.05   13.5   0.4   1   1   0.00028      0.38   10.7   0.0     5    40   355   392   351   409 0.71 Lecithin retinol acyltransferase
SBP_bac_8            PF13416.1    281 sp|O07009|CYCB_BACSU -            421   4.6e-43  147.9   7.1   1   1   2.3e-46   6.7e-43  147.4   7.1     2   278    55   358    54   361 0.83 Bacterial extracellular solute-binding protein
SBP_bac_1            PF01547.20   315 sp|O07009|CYCB_BACSU -            421   5.3e-33  115.0  10.0   1   1   2.6e-36   7.7e-33  114.5  10.0     9   313    51   330    44   332 0.91 Bacterial extracellular solute-binding protein
SBP_bac_6            PF13343.1    242 sp|O07009|CYCB_BACSU -            421   0.00069   19.0   0.7   1   2   1.6e-06    0.0047   16.2   0.0     4    76    91   166    89   171 0.79 Bacterial extracellular solute-binding protein
SBP_bac_11           PF13531.1    230 sp|O07009|CYCB_BACSU -            421    0.0039   16.8   0.1   1   2   3.4e-06      0.01   15.5   0.0     7    71    46   117    40   267 0.85 Bacterial extracellular solute-binding protein
Bac_Ubq_Cox          PF01654.12   436 sp|P94364|CYDA_BACSU -            468  1.5e-178  593.6  26.7   1   1  4.8e-182  1.8e-178  593.4  26.7     1   435     6   444     6   445 0.99 Bacterial Cytochrome Ubiquinol Oxidase
XhlA                 PF10779.4     71 sp|P94364|CYDA_BACSU -            468    0.0079   16.0   2.3   1   2   3.5e-05      0.13   12.2   0.9    48    69   325   346   324   347 0.93 Haemolysin XhlA
DUF2975              PF11188.3    136 sp|P94364|CYDA_BACSU -            468      0.58    9.8   0.0   3   3   0.00016      0.58    9.8   0.0    12    74   170   230   155   238 0.85 Protein of unknown function (DUF2975)
Cyto_ox_2            PF02322.10   328 sp|P94365|CYDB_BACSU -            338  1.4e-108  362.9  29.7   1   1  1.1e-112  1.6e-108  362.7  29.7     2   328     4   327     3   327 0.96 Cytochrome oxidase subunit II
ABC_tran             PF00005.22   137 sp|P94366|CYDC_BACSU -            567   2.9e-29  102.0   0.0   1   1   4.1e-32     5e-29  101.3   0.0     2   137   344   492   343   492 0.87 ABC transporter
ABC_membrane         PF00664.18   275 sp|P94366|CYDC_BACSU -            567   2.1e-18   66.7  11.8   1   1   2.4e-21     3e-18   66.2  11.8     2   267    16   278    15   280 0.90 ABC transporter transmembrane region
AAA_21               PF13304.1    303 sp|P94366|CYDC_BACSU -            567   1.4e-08   35.0   1.8   1   2   1.4e-06    0.0017   18.3   0.6     3    25   357   389   356   435 0.67 AAA domain
AAA_21               PF13304.1    303 sp|P94366|CYDC_BACSU -            567   1.4e-08   35.0   1.8   2   2   1.5e-05     0.019   14.9   0.0   236   297   463   520   453   523 0.83 AAA domain
AAA_15               PF13175.1    415 sp|P94366|CYDC_BACSU -            567   4.2e-06   26.0   0.2   2   2   4.5e-06    0.0055   15.7   0.0   371   410   482   520   473   523 0.91 AAA ATPase domain
AAA_29               PF13555.1     62 sp|P94366|CYDC_BACSU -            567   0.00026   20.4   0.2   1   1   4.3e-07   0.00053   19.4   0.2    24    57   354   388   342   393 0.71 P-loop containing region of AAA domain
SMC_N                PF02463.14   220 sp|P94366|CYDC_BACSU -            567   0.00035   19.8   0.1   1   1   1.8e-06    0.0023   17.2   0.1   107   209   291   532   286   538 0.93 RecF/RecN/SMC N terminal domain
MscS_TM              PF12794.2    340 sp|P94366|CYDC_BACSU -            567   0.00052   18.7   5.3   1   2   0.00041       0.5    8.9   0.2   230   263    48    81    10    91 0.90 Mechanosensitive ion channel inner membrane domain 1
MscS_TM              PF12794.2    340 sp|P94366|CYDC_BACSU -            567   0.00052   18.7   5.3   2   2   5.8e-05     0.071   11.7   0.9   130   189   133   194   113   211 0.83 Mechanosensitive ion channel inner membrane domain 1
DUF258               PF03193.11   161 sp|P94366|CYDC_BACSU -            567    0.0038   16.4   0.0   1   1   5.4e-06    0.0066   15.6   0.0    21    57   338   375   319   415 0.79 Protein of unknown function, DUF258
AAA_17               PF13207.1    121 sp|P94366|CYDC_BACSU -            567     0.011   16.5   0.1   1   1   3.6e-05     0.044   14.6   0.0     1    19   355   373   355   415 0.90 AAA domain
ArgK                 PF03308.11   267 sp|P94366|CYDC_BACSU -            567     0.012   14.4   0.2   1   1     2e-05     0.024   13.4   0.2    30    60   354   384   344   397 0.86 ArgK protein
AAA_23               PF13476.1    202 sp|P94366|CYDC_BACSU -            567     0.021   15.1   0.9   1   1   3.7e-05     0.045   14.0   0.9     8    38   341   372   340   379 0.91 AAA domain
MMR_HSR1             PF01926.18   116 sp|P94366|CYDC_BACSU -            567      0.14   12.1   0.0   1   1   0.00024       0.3   11.0   0.0     1    19   355   373   355   446 0.87 50S ribosome-binding GTPase
ABC_tran             PF00005.22   137 sp|P94367|CYDD_BACSU -            575   3.7e-30  105.0   0.0   1   1   3.5e-33   5.7e-30  104.3   0.0     1   136   353   500   353   501 0.87 ABC transporter
ABC_membrane         PF00664.18   275 sp|P94367|CYDD_BACSU -            575   8.2e-14   51.6   8.7   1   1   7.5e-17   1.2e-13   51.0   8.7     6   268    19   283    16   287 0.79 ABC transporter transmembrane region
AAA_21               PF13304.1    303 sp|P94367|CYDD_BACSU -            575   7.6e-06   26.0   1.4   2   2   3.7e-08   6.1e-05   23.1   0.0   178   286   448   519   402   530 0.62 AAA domain
AAA_29               PF13555.1     62 sp|P94367|CYDD_BACSU -            575   0.00046   19.6   0.1   1   1   8.8e-07    0.0015   18.0   0.1    17    51   358   391   351   400 0.74 P-loop containing region of AAA domain
SMC_N                PF02463.14   220 sp|P94367|CYDD_BACSU -            575     0.005   16.0   0.0   1   1     3e-05      0.05   12.8   0.0   135   211   454   543   354   551 0.72 RecF/RecN/SMC N terminal domain
FtsK_SpoIIIE         PF01580.13   205 sp|P94367|CYDD_BACSU -            575      0.02   14.3   0.1   1   1   2.3e-05     0.037   13.4   0.1    29    63   354   387   348   400 0.85 FtsK/SpoIIIE family
DUF258               PF03193.11   161 sp|P94367|CYDD_BACSU -            575     0.025   13.7   0.0   1   1   3.1e-05     0.051   12.7   0.0    17    60   344   395   331   477 0.68 Protein of unknown function, DUF258
ABC_ATPase           PF09818.4    448 sp|P94367|CYDD_BACSU -            575      0.15   10.6   0.0   1   1   0.00014      0.24    9.9   0.0   294   351   443   501   436   521 0.85 Predicted ATPase of the ABC class
IncA                 PF04156.9    191 sp|P94367|CYDD_BACSU -            575      0.17   11.4   0.0   1   1    0.0001      0.17   11.4   0.0    12    76   138   197   132   243 0.76 IncA protein
p450                 PF00067.17   463 sp|O31440|CYPC_BACSU -            417   1.3e-19   70.0   0.9   1   2   3.5e-05      0.52    8.7   0.0    25   134    24   131    14   171 0.77 Cytochrome P450
p450                 PF00067.17   463 sp|O31440|CYPC_BACSU -            417   1.3e-19   70.0   0.9   2   2   9.6e-21   1.4e-16   60.0   0.2   325   442   277   392   276   410 0.90 Cytochrome P450
p450                 PF00067.17   463 sp|O08394|CYPD_BACSU -           1061   1.6e-82  277.4   0.1   1   1   8.6e-86   2.1e-82  277.0   0.1     6   459    12   447     7   451 0.89 Cytochrome P450
FAD_binding_1        PF00667.15   219 sp|O08394|CYPD_BACSU -           1061   3.9e-52  176.8   0.0   2   2   4.9e-55   1.2e-51  175.2   0.0     8   218   673   879   668   879 0.96 FAD binding domain
Flavodoxin_1         PF00258.20   143 sp|O08394|CYPD_BACSU -           1061   7.2e-26   90.8   0.0   1   1     8e-29     2e-25   89.4   0.0     1   143   495   627   495   628 0.90 Flavodoxin
NAD_binding_1        PF00175.16   109 sp|O08394|CYPD_BACSU -           1061   1.3e-18   67.4   0.0   1   1   1.6e-21     4e-18   65.9   0.0     1   108   913  1022   913  1023 0.83 Oxidoreductase NAD-binding domain
Flavodoxin_5         PF12724.2    143 sp|O08394|CYPD_BACSU -           1061    0.0015   18.5   0.0   1   1   1.3e-06    0.0032   17.4   0.0     1    70   494   563   494   626 0.77 Flavodoxin domain
Pilus_CpaD           PF09476.5    203 sp|O08394|CYPD_BACSU -           1061     0.044   13.2   0.0   1   2   0.00036      0.88    9.0   0.0    39   164   455   581   442   586 0.82 Pilus biogenesis CpaD protein (pilus_cpaD)
p450                 PF00067.17   463 sp|O08336|CYPE_BACSU -           1054   3.3e-86  289.6   0.1   1   1   1.9e-89   5.8e-86  288.8   0.1    11   462    17   450     8   451 0.89 Cytochrome P450
FAD_binding_1        PF00667.15   219 sp|O08336|CYPE_BACSU -           1054   1.1e-56  191.7   0.0   1   1   8.1e-60   2.4e-56  190.6   0.0     9   219   666   872   659   872 0.96 FAD binding domain
Flavodoxin_1         PF00258.20   143 sp|O08336|CYPE_BACSU -           1054   5.6e-25   88.0   0.1   1   1   3.4e-28     1e-24   87.1   0.1     1   143   488   620   488   620 0.95 Flavodoxin
NAD_binding_1        PF00175.16   109 sp|O08336|CYPE_BACSU -           1054   4.6e-18   65.7   0.0   1   1   4.4e-21   1.3e-17   64.3   0.0     1   108   905  1015   905  1016 0.85 Oxidoreductase NAD-binding domain
Flavodoxin_5         PF12724.2    143 sp|O08336|CYPE_BACSU -           1054      0.09   12.7   0.0   1   1   8.2e-05      0.24   11.3   0.0     1    75   487   560   487   589 0.89 Flavodoxin domain
p450                 PF00067.17   463 sp|O34926|CYPX_BACSU -            405   3.6e-38  131.2   0.0   1   1   1.3e-39   1.9e-35  122.3   0.0    20   431    17   372     6   380 0.82 Cytochrome P450
APS_kinase           PF01583.15   157 sp|O34577|CYSC1_BACSU -            197   3.9e-75  250.7   0.0   1   1   1.2e-77   4.7e-75  250.5   0.0     2   155    26   179    25   181 0.98 Adenylylsulphate kinase
AAA_33               PF13671.1    143 sp|O34577|CYSC1_BACSU -            197   7.5e-11   42.0   0.0   1   1   2.5e-13   9.5e-11   41.7   0.0     2   122    29   152    28   184 0.82 AAA domain
AAA_18               PF13238.1    129 sp|O34577|CYSC1_BACSU -            197     2e-08   34.5   0.1   1   1   9.5e-11   3.6e-08   33.7   0.1     3   108    31   140    29   154 0.86 AAA domain
AAA_17               PF13207.1    121 sp|O34577|CYSC1_BACSU -            197   4.2e-08   34.0   0.1   1   1   1.5e-10   5.7e-08   33.5   0.1     3    78    30   112    28   191 0.64 AAA domain
KTI12                PF08433.5    270 sp|O34577|CYSC1_BACSU -            197   6.6e-06   25.5   0.0   1   1   2.3e-08   8.8e-06   25.1   0.0     5    83    30   107    27   171 0.73 Chromatin associated protein KTI12
AAA_10               PF12846.2    304 sp|O34577|CYSC1_BACSU -            197   1.1e-05   25.0   0.0   1   1   3.5e-08   1.3e-05   24.7   0.0     5    43    30    68    26   121 0.89 AAA-like domain
Zeta_toxin           PF06414.7    201 sp|O34577|CYSC1_BACSU -            197   3.5e-05   22.9   0.0   1   1   1.5e-07   5.7e-05   22.2   0.0    10    75    18    87     9   104 0.75 Zeta toxin
MobB                 PF03205.9    140 sp|O34577|CYSC1_BACSU -            197   0.00014   21.5   0.0   1   1   4.9e-07   0.00019   21.1   0.0     2    34    28    60    27   131 0.91 Molybdopterin guanine dinucleotide synthesis protein B
AAA_16               PF13191.1    185 sp|O34577|CYSC1_BACSU -            197   0.00027   20.9   0.0   1   1   9.2e-07   0.00035   20.6   0.0    21    63    23    65     9   127 0.78 AAA ATPase domain
CbiA                 PF01656.18   195 sp|O34577|CYSC1_BACSU -            197   0.00043   19.7   0.0   1   1   2.9e-06    0.0011   18.4   0.0     6    37    33    64    28    65 0.92 CobQ/CobB/MinD/ParA nucleotide binding domain
ABC_tran             PF00005.22   137 sp|O34577|CYSC1_BACSU -            197   0.00043   20.5   0.0   1   1   1.5e-06   0.00058   20.1   0.0    10    68    25    91    21   149 0.70 ABC transporter
AAA_29               PF13555.1     62 sp|O34577|CYSC1_BACSU -            197   0.00044   19.7   0.0   1   1     2e-06   0.00077   18.9   0.0    17    44    18    47     4    56 0.72 P-loop containing region of AAA domain
PhoH                 PF02562.11   205 sp|O34577|CYSC1_BACSU -            197   0.00059   19.1   0.0   1   1   1.9e-06   0.00073   18.8   0.0    10    77    16    85     9   124 0.85 PhoH-like protein
ArgK                 PF03308.11   267 sp|O34577|CYSC1_BACSU -            197   0.00072   18.4   0.0   1   1   2.7e-06     0.001   17.9   0.0    28    64    25    61    12    68 0.89 ArgK protein
AAA_30               PF13604.1    196 sp|O34577|CYSC1_BACSU -            197    0.0012   18.5   0.0   1   1   4.7e-06    0.0018   17.8   0.0    17    52    25    60    16    75 0.89 AAA domain
AAA_14               PF13173.1    128 sp|O34577|CYSC1_BACSU -            197     0.002   17.9   0.0   1   1     1e-05    0.0038   17.1   0.0     3    43    27    73    25   133 0.64 AAA domain
AAA_19               PF13245.1     76 sp|O34577|CYSC1_BACSU -            197    0.0043   16.7   0.0   1   1   2.2e-05    0.0082   15.8   0.0     8    35    25    50    19    69 0.76 Part of AAA domain
RNase_Zc3h12a        PF11977.3    155 sp|O34577|CYSC1_BACSU -            197    0.0054   16.5   0.0   1   1     2e-05    0.0077   16.0   0.0     3    53    56   113    54   144 0.84 Zc3h12a-like Ribonuclease NYN domain
SRP54                PF00448.17   196 sp|O34577|CYSC1_BACSU -            197    0.0066   15.9   0.0   1   1   2.5e-05    0.0094   15.4   0.0     3    43    28    68    26    99 0.90 SRP54-type protein, GTPase domain
CPT                  PF07931.7    174 sp|O34577|CYSC1_BACSU -            197    0.0077   15.8   0.6   1   1   0.00044      0.17   11.5   0.6     3   127    28   141    26   145 0.66 Chloramphenicol phosphotransferase-like protein
AAA_22               PF13401.1    131 sp|O34577|CYSC1_BACSU -            197    0.0087   16.2   0.0   1   1   4.1e-05     0.016   15.3   0.0     3    30    25    52    20   102 0.88 AAA domain
NTPase_1             PF03266.10   168 sp|O34577|CYSC1_BACSU -            197    0.0088   15.7   0.0   1   1   3.2e-05     0.012   15.3   0.0     3    39    30    66    28   106 0.82 NTPase
ArsA_ATPase          PF02374.10   305 sp|O34577|CYSC1_BACSU -            197     0.012   14.6   0.0   1   1   3.8e-05     0.014   14.4   0.0     3    38    28    63    26   121 0.87 Anion-transporting ATPase
IstB_IS21            PF01695.12   178 sp|O34577|CYSC1_BACSU -            197     0.012   14.9   0.0   1   1   5.1e-05     0.019   14.3   0.0    48    86    27    65    12    96 0.83 IstB-like ATP binding protein
AAA                  PF00004.24   132 sp|O34577|CYSC1_BACSU -            197     0.014   15.5   0.0   1   1     6e-05     0.023   14.9   0.0     3    38    31    75    29   124 0.76 ATPase family associated with various cellular activities (AAA)
CoaE                 PF01121.15   180 sp|O34577|CYSC1_BACSU -            197     0.018   14.4   0.1   1   1   9.3e-05     0.036   13.4   0.1     4    35    30    67    27   100 0.82 Dephospho-CoA kinase
Torsin               PF06309.6    127 sp|O34577|CYSC1_BACSU -            197     0.018   14.8   0.0   1   1   8.8e-05     0.034   14.0   0.0    45    83    18    56     8    61 0.89 Torsin
DUF258               PF03193.11   161 sp|O34577|CYSC1_BACSU -            197     0.021   14.0   0.4   1   1     8e-05      0.03   13.4   0.4    30    59    21    50     2   144 0.80 Protein of unknown function, DUF258
Thymidylate_kin      PF02223.12   186 sp|O34577|CYSC1_BACSU -            197     0.021   14.1   0.0   1   1   0.00012     0.046   13.1   0.0     3    28    33    59    31    65 0.89 Thymidylate kinase
DUF815               PF05673.8    250 sp|O34577|CYSC1_BACSU -            197     0.028   13.3   0.0   1   1   0.00011     0.042   12.7   0.0    49    93    22    66     7    71 0.81 Protein of unknown function (DUF815)
G-alpha              PF00503.15   389 sp|O34577|CYSC1_BACSU -            197     0.035   12.7   0.0   1   1   0.00011      0.04   12.5   0.0    43    86    11    55     3   121 0.74 G-protein alpha subunit
MipZ                 PF09140.6    261 sp|O34577|CYSC1_BACSU -            197     0.036   13.1   0.0   1   1   0.00012     0.046   12.8   0.0    11    50    36    75    31   137 0.76 ATPase MipZ
AAA_31               PF13614.1    157 sp|O34577|CYSC1_BACSU -            197     0.039   13.9   0.0   1   1   0.00015     0.057   13.3   0.0    10    42    35    67    28   111 0.84 AAA domain
NB-ARC               PF00931.17   287 sp|O34577|CYSC1_BACSU -            197     0.043   12.6   0.0   1   1    0.0002     0.076   11.8   0.0    15    42    22    49    13    60 0.81 NB-ARC domain
DUF87                PF01935.12   229 sp|O34577|CYSC1_BACSU -            197     0.045   13.5   0.0   1   1   0.00021     0.081   12.7   0.0    30    59    33    61    29    68 0.93 Domain of unknown function DUF87
T2SE                 PF00437.15   272 sp|O34577|CYSC1_BACSU -            197     0.058   12.2   0.0   1   1   0.00022     0.085   11.7   0.0   129   160    27    58    10    66 0.78 Type II/IV secretion system protein
AAA_5                PF07728.9    139 sp|O34577|CYSC1_BACSU -            197     0.059   13.0   0.0   1   1    0.0011      0.41   10.3   0.0     3    33    30    61    28   102 0.89 AAA domain (dynein-related subfamily)
TrwB_AAD_bind        PF10412.4    386 sp|O34577|CYSC1_BACSU -            197     0.064   11.8   0.0   1   1   0.00025     0.094   11.3   0.0    17    50    28    61    13    64 0.86 Type IV secretion-system coupling protein DNA-binding domain
RNA_helicase         PF00910.17   107 sp|O34577|CYSC1_BACSU -            197     0.081   13.1   0.0   1   1   0.00037      0.14   12.3   0.0     1    24    29    52    29    80 0.88 RNA helicase
APS_kinase           PF01583.15   157 sp|O06735|CYSC2_BACSU -            199   9.1e-75  249.5   0.0   1   1     1e-77   1.1e-74  249.3   0.0     1   155    26   180    26   182 0.98 Adenylylsulphate kinase
AAA_33               PF13671.1    143 sp|O06735|CYSC2_BACSU -            199   1.2e-07   31.7   0.0   1   1   1.4e-10   1.5e-07   31.3   0.0     1   121    29   152    29   168 0.80 AAA domain
Torsin               PF06309.6    127 sp|O06735|CYSC2_BACSU -            199   5.9e-05   22.9   0.0   1   1   9.3e-08   9.8e-05   22.2   0.0    48    85    22    59    13    66 0.89 Torsin
AAA_18               PF13238.1    129 sp|O06735|CYSC2_BACSU -            199   0.00048   20.4   0.1   1   1   1.1e-06    0.0012   19.1   0.1     3   108    32   141    31   158 0.80 AAA domain
AAA_17               PF13207.1    121 sp|O06735|CYSC2_BACSU -            199   0.00065   20.5   0.1   1   1   7.7e-07   0.00082   20.1   0.1     3    46    31    80    29   180 0.75 AAA domain
AAA_16               PF13191.1    185 sp|O06735|CYSC2_BACSU -            199    0.0016   18.4   0.0   1   1     2e-06    0.0021   18.0   0.0    20    59    23    64    16   118 0.81 AAA ATPase domain
KTI12                PF08433.5    270 sp|O06735|CYSC2_BACSU -            199    0.0054   15.9   0.0   1   1   5.6e-06    0.0059   15.8   0.0     6    57    32    86    28   171 0.86 Chromatin associated protein KTI12
AAA_10               PF12846.2    304 sp|O06735|CYSC2_BACSU -            199    0.0081   15.6   0.0   1   1   9.1e-06    0.0096   15.3   0.0     4    47    30    73    27   103 0.87 AAA-like domain
AAA_29               PF13555.1     62 sp|O06735|CYSC2_BACSU -            199     0.027   13.9   0.0   1   1   4.6e-05     0.049   13.1   0.0    25    45    29    49    16    59 0.78 P-loop containing region of AAA domain
MobB                 PF03205.9    140 sp|O06735|CYSC2_BACSU -            199     0.046   13.4   0.0   1   1   7.9e-05     0.083   12.5   0.0     1    33    28    60    28    69 0.90 Molybdopterin guanine dinucleotide synthesis protein B
ArgK                 PF03308.11   267 sp|O06735|CYSC2_BACSU -            199     0.052   12.3   0.0   1   1   6.3e-05     0.066   11.9   0.0    28    63    26    61    17    95 0.89 ArgK protein
DUF258               PF03193.11   161 sp|O06735|CYSC2_BACSU -            199      0.11   11.7   0.1   1   1   0.00023      0.24   10.5   0.0    36    59    28    51    11    97 0.82 Protein of unknown function, DUF258
Thymidylate_kin      PF02223.12   186 sp|O06735|CYSC2_BACSU -            199      0.11   11.8   0.0   1   1   0.00017      0.17   11.2   0.0     3    29    34    61    32    66 0.89 Thymidylate kinase
Zeta_toxin           PF06414.7    201 sp|O06735|CYSC2_BACSU -            199      0.17   10.9   0.0   1   1   0.00021      0.22   10.5   0.0    22    57    33    70    14    97 0.82 Zeta toxin
Hexapep              PF00132.19    36 sp|Q06750|CYSE_BACSU -            217   1.5e-11   43.2  11.2   2   3     2e-06    0.0097   15.3   1.9    11    35    84   108    83   109 0.62 Bacterial transferase hexapeptide (six repeats)
Hexapep              PF00132.19    36 sp|Q06750|CYSE_BACSU -            217   1.5e-11   43.2  11.2   3   3   5.4e-11   2.7e-07   29.8   0.4     1    35   118   152   118   153 0.95 Bacterial transferase hexapeptide (six repeats)
SATase_N             PF06426.9    105 sp|Q06750|CYSE_BACSU -            217    0.0001   22.5   0.0   1   2   6.2e-08   0.00031   20.9   0.0    72   103     5    36     2    38 0.92 Serine acetyltransferase, N-terminal
Hexapep_2            PF14602.1     34 sp|Q06750|CYSE_BACSU -            217    0.0042   16.6  15.1   1   2   1.5e-05     0.074   12.6   3.2    15    32    84   101    65   103 0.89 Hexapeptide repeat of succinyl-transferase
Hexapep_2            PF14602.1     34 sp|Q06750|CYSE_BACSU -            217    0.0042   16.6  15.1   2   2   5.5e-05      0.27   10.8   1.3    17    32   135   151   120   152 0.81 Hexapeptide repeat of succinyl-transferase
PAPS_reduct          PF01507.14   174 sp|P94498|CYSH1_BACSU -            233   4.6e-56  189.3   0.0   1   1   3.7e-60   5.4e-56  189.1   0.0     2   174    38   209    37   209 0.97 Phosphoadenosine phosphosulfate reductase family
PAPS_reduct          PF01507.14   174 sp|O06737|CYSH2_BACSU -            236   1.1e-54  184.8   0.0   1   1   8.9e-59   1.3e-54  184.6   0.0     1   174    39   211    39   211 0.98 Phosphoadenosine phosphosulfate reductase family
NIR_SIR              PF01077.17   157 sp|O32213|CYSI_BACSU -            571   1.3e-53  180.5   0.0   1   2   3.9e-49   1.9e-45  154.0   0.0     2   156   170   330   169   331 0.98 Nitrite and sulphite reductase 4Fe-4S domain
NIR_SIR              PF01077.17   157 sp|O32213|CYSI_BACSU -            571   1.3e-53  180.5   0.0   2   2   2.9e-09   1.4e-05   24.4   0.0     5   142   430   559   426   564 0.90 Nitrite and sulphite reductase 4Fe-4S domain
NIR_SIR_ferr         PF03460.12    69 sp|O32213|CYSI_BACSU -            571   5.2e-32  109.2   0.1   1   3   1.8e-17     9e-14   50.8   0.0     7    64    75   132    69   137 0.86 Nitrite/Sulfite reductase ferredoxin-like half domain
NIR_SIR_ferr         PF03460.12    69 sp|O32213|CYSI_BACSU -            571   5.2e-32  109.2   0.1   2   3   9.4e-19   4.7e-15   54.9   0.0     5    68   354   417   350   418 0.93 Nitrite/Sulfite reductase ferredoxin-like half domain
DUF4113              PF13438.1     52 sp|O32213|CYSI_BACSU -            571     0.023   14.2   0.1   1   1   1.1e-05     0.055   13.0   0.1     7    35    96   129    95   133 0.86 Domain of unknown function (DUF4113)
PALP                 PF00291.20   306 sp|P37887|CYSK_BACSU -            308   5.3e-64  216.3   0.6   1   1   1.2e-67     6e-64  216.1   0.6     1   305     8   293     8   294 0.89 Pyridoxal-phosphate dependent enzyme
ADH_zinc_N           PF00107.21   130 sp|P37887|CYSK_BACSU -            308   0.00094   18.7   1.1   1   2   7.7e-06     0.038   13.5   0.4     1    53    77   130    77   194 0.78 Zinc-binding dehydrogenase
PALP                 PF00291.20   306 sp|O34476|CYSM_BACSU -            311   2.3e-64  217.5   0.1   1   1   3.5e-68   2.6e-64  217.3   0.1     3   303    10   294     8   297 0.87 Pyridoxal-phosphate dependent enzyme
Cation_efflux        PF01545.16   285 sp|O07084|CZCD_BACSU -            311   2.5e-78  263.0  14.8   1   1   7.7e-82   2.9e-78  262.8  14.8     1   284    14   291    14   292 0.97 Cation efflux family
DUF4117              PF13491.1    171 sp|O07084|CZCD_BACSU -            311    0.0013   18.2   4.0   2   2   3.5e-07    0.0013   18.2   4.0     9    81   119   192   111   210 0.72 Domain of unknown function (DUF4117)
GpcrRhopsn4          PF10192.4    257 sp|O07084|CZCD_BACSU -            311    0.0021   17.3   3.9   1   1   5.6e-07    0.0021   17.3   3.9     7   124    60   179    55   226 0.80 Rhodopsin-like GPCR transmembrane domain
Cytochrom_C_asm      PF01578.15   214 sp|O07084|CZCD_BACSU -            311      0.34   10.4   8.4   2   2   9.8e-06     0.036   13.5   2.0    12    96    90   174    81   181 0.81 Cytochrome C assembly protein
Aminotran_4          PF01063.14   231 sp|O07597|DAAA_BACSU -            282   3.4e-39  134.6   0.0   1   1   5.4e-43     4e-39  134.4   0.0     2   231    43   271    42   271 0.85 Aminotransferase class IV
Minor_capsid_3       PF12691.2    135 sp|O07597|DAAA_BACSU -            282      0.11   12.1   0.0   1   1   2.8e-05      0.21   11.2   0.0    33   100    81   153    62   159 0.81 Minor capsid protein from bacteriophage
Peptidase_S11        PF00768.15   241 sp|P08750|DACA_BACSU -            443   1.8e-85  286.0   4.6   1   1   7.3e-89   2.7e-85  285.4   4.6     2   240    29   288    28   289 0.98 D-alanyl-D-alanine carboxypeptidase
PBP5_C               PF07943.8     91 sp|P08750|DACA_BACSU -            443   3.3e-25   87.9   7.3   1   1   2.3e-28   8.7e-25   86.5   7.3     1    91   310   413   310   413 0.97 Penicillin-binding protein 5, C-terminal domain
Beta-lactamase2      PF13354.1    197 sp|P08750|DACA_BACSU -            443   2.6e-14   53.1   1.2   1   2     1e-17   3.8e-14   52.6   0.4     3   165    50   236    48   282 0.82 Beta-lactamase enzyme family
Beta-lactamase       PF00144.19   330 sp|P08750|DACA_BACSU -            443   5.9e-05   22.2   0.0   1   1   2.7e-08   9.8e-05   21.5   0.0    45   111    58   135    48   205 0.88 Beta-lactamase
Peptidase_S11        PF00768.15   241 sp|P35150|DACB_BACSU -            382   1.8e-82  276.2   8.8   1   1   8.1e-86     3e-82  275.5   8.8     4   240    24   250    21   251 0.96 D-alanyl-D-alanine carboxypeptidase
Beta-lactamase2      PF13354.1    197 sp|P35150|DACB_BACSU -            382   4.9e-10   39.1   0.6   1   1     2e-13   7.3e-10   38.6   0.6     7   134    47   176    42   216 0.84 Beta-lactamase enzyme family
PBP5_C               PF07943.8     91 sp|P35150|DACB_BACSU -            382   6.2e-09   35.7   1.0   2   2   1.7e-12   6.2e-09   35.7   1.0     1    88   267   354   267   357 0.88 Penicillin-binding protein 5, C-terminal domain
Terminase_2          PF03592.11   145 sp|P35150|DACB_BACSU -            382      0.09   13.0   2.2   1   2   2.7e-05     0.099   12.9   0.1    52   136    49   151    43   160 0.86 Terminase small subunit
Peptidase_S13        PF02113.10   444 sp|P39844|DACC_BACSU -            491  5.2e-178  592.0   0.5   1   1    8e-182  5.9e-178  591.9   0.5     2   443    37   490    36   491 0.99 D-Ala-D-Ala carboxypeptidase 3 (S13) family
Peptidase_S11        PF00768.15   241 sp|P39844|DACC_BACSU -            491    0.0027   17.0   0.0   1   1   6.7e-07    0.0049   16.1   0.0    19    50    61    92    45   108 0.84 D-alanyl-D-alanine carboxypeptidase
Peptidase_S11        PF00768.15   241 sp|P38422|DACF_BACSU -            389   2.7e-92  308.4   5.3   1   1   1.7e-95   4.1e-92  307.8   5.3     4   240    29   260    26   261 0.98 D-alanyl-D-alanine carboxypeptidase
PBP5_C               PF07943.8     91 sp|P38422|DACF_BACSU -            389   4.4e-22   77.8   7.0   1   1   4.1e-25     1e-21   76.7   7.0     1    91   280   371   280   371 0.95 Penicillin-binding protein 5, C-terminal domain
Beta-lactamase2      PF13354.1    197 sp|P38422|DACF_BACSU -            389   5.7e-10   38.9   0.1   1   1   3.4e-13   8.4e-10   38.4   0.1     2   152    46   205    45   226 0.81 Beta-lactamase enzyme family
Beta-lactamase       PF00144.19   330 sp|P38422|DACF_BACSU -            389   0.00012   21.2   0.0   1   1   1.9e-07   0.00047   19.2   0.0    15   100    38   117    24   207 0.86 Beta-lactamase
Peptidase_S13        PF02113.10   444 sp|P38422|DACF_BACSU -            389    0.0015   17.1   0.1   1   1     1e-06    0.0026   16.3   0.1    17    61    37    80    28    99 0.84 D-Ala-D-Ala carboxypeptidase 3 (S13) family
DAGK_cat             PF00781.19   130 sp|O31502|DAGK_BACSU -            303   5.8e-35  119.5   0.3   1   1   1.3e-38   9.4e-35  118.8   0.3     2   128     4   129     3   131 0.95 Diacylglycerol kinase catalytic domain
NAD_kinase           PF01513.16   285 sp|O31502|DAGK_BACSU -            303   4.5e-09   35.5   0.0   1   1   6.9e-13   5.1e-09   35.3   0.0     4   134     6   120     3   269 0.82 ATP-NAD kinase
DHDPS                PF00701.17   289 sp|Q04796|DAPA_BACSU -            290  2.7e-121  403.6   0.3   1   1  8.1e-125    3e-121  403.4   0.3     1   287     2   289     2   290 0.99 Dihydrodipicolinate synthetase family
DUF4525              PF15027.1    139 sp|Q04796|DAPA_BACSU -            290     0.028   13.9   0.0   1   1   1.9e-05     0.069   12.6   0.0    97   133    23    59    19    64 0.92 Domain of unknown function (DUF4525)
Dus                  PF01207.12   310 sp|Q04796|DAPA_BACSU -            290      0.12   11.1   0.0   1   1   7.2e-05      0.27   10.0   0.0   143   231    28   122    17   136 0.65 Dihydrouridine synthase (Dus)
AP_endonuc_2         PF01261.19   213 sp|Q04796|DAPA_BACSU -            290      0.17   11.1   0.0   2   2   0.00013      0.47    9.7   0.0     2    54    91   142    90   181 0.88 Xylose isomerase-like TIM barrel
DapB_C               PF05173.9    132 sp|P42976|DAPB_BACSU -            267   1.1e-38  131.9   0.2   1   1   6.1e-42   1.5e-38  131.5   0.2     1   131   132   265   132   266 0.92 Dihydrodipicolinate reductase, C-terminus
DapB_N               PF01113.15   124 sp|P42976|DAPB_BACSU -            267     8e-31  106.5   0.0   1   1   4.9e-34   1.2e-30  105.9   0.0     1   124     6   129     6   129 0.94 Dihydrodipicolinate reductase, N-terminus
Semialdhyde_dh       PF01118.19   121 sp|P42976|DAPB_BACSU -            267   0.00041   20.6   0.0   1   1   3.1e-07   0.00077   19.7   0.0     2    93     8    98     7   106 0.83 Semialdehyde dehydrogenase, NAD binding domain
GFO_IDH_MocA         PF01408.17   120 sp|P42976|DAPB_BACSU -            267    0.0012   19.3   0.0   1   1   8.2e-07     0.002   18.6   0.0     1    89     6    98     6   125 0.86 Oxidoreductase family, NAD-binding Rossmann fold
Saccharop_dh         PF03435.13   386 sp|P42976|DAPB_BACSU -            267     0.014   14.3   0.0   1   1   7.6e-06     0.019   13.9   0.0     3   120    10   125     8   156 0.90 Saccharopine dehydrogenase
NAD_binding_3        PF03447.11   117 sp|P42976|DAPB_BACSU -            267     0.027   14.8   0.0   1   1   1.9e-05     0.047   14.0   0.0     3   111    15   120    14   125 0.78 Homoserine dehydrogenase, NAD binding domain
Peptidase_M20        PF01546.23   189 sp|O34916|DAPEL_BACSU -            374   9.7e-21   74.1   2.0   1   1   2.7e-24   1.4e-20   73.6   2.0     2   185    66   367    65   370 0.91 Peptidase family M20/M25/M40
M20_dimer            PF07687.9    112 sp|O34916|DAPEL_BACSU -            374     1e-11   44.5   1.3   1   1   2.6e-15   1.3e-11   44.2   0.1    11   105   180   269   174   273 0.93 Peptidase dimerisation domain
FAD_binding_4        PF01565.18   139 sp|O34916|DAPEL_BACSU -            374     0.033   13.6   0.1   1   1   1.3e-05     0.066   12.6   0.1    17   120   153   250   146   256 0.85 FAD binding domain
DAP_epimerase        PF01678.14   121 sp|O32114|DAPF_BACSU -            284   4.1e-74  246.2   0.8   1   2     1e-38     5e-35  120.0   0.0     1   120     6   130     6   131 0.98 Diaminopimelate epimerase
DAP_epimerase        PF01678.14   121 sp|O32114|DAPF_BACSU -            284   4.1e-74  246.2   0.8   2   2   2.6e-40   1.3e-36  125.1   0.1     2   120   161   276   160   277 0.98 Diaminopimelate epimerase
PhzC-PhzF            PF02567.11   281 sp|O32114|DAPF_BACSU -            284   1.4e-06   27.7   0.0   1   1   3.7e-10   1.8e-06   27.3   0.0     4   231     6   243     5   270 0.77 Phenazine biosynthesis-like protein
Pro_racemase         PF05544.6    325 sp|O32114|DAPF_BACSU -            284   0.00013   20.8   0.9   1   2   4.8e-08   0.00024   20.0   0.1    58   138    51   127    45   219 0.80 Proline racemase
DapH_N               PF08503.5     83 sp|O34981|DAPH_BACSU -            236   2.8e-39  133.1   0.2   1   1   1.7e-42   6.4e-39  131.9   0.2     1    83     4    87     4    87 0.99 Tetrahydrodipicolinate succinyltransferase N-terminal
Hexapep              PF00132.19    36 sp|O34981|DAPH_BACSU -            236   2.3e-24   83.7  25.9   1   3   2.2e-08   8.1e-05   21.9   0.1     8    34    92   118    91   119 0.92 Bacterial transferase hexapeptide (six repeats)
Hexapep              PF00132.19    36 sp|O34981|DAPH_BACSU -            236   2.3e-24   83.7  25.9   2   3   3.3e-14   1.2e-10   40.3   3.6     1    36   121   156   121   156 0.96 Bacterial transferase hexapeptide (six repeats)
Hexapep              PF00132.19    36 sp|O34981|DAPH_BACSU -            236   2.3e-24   83.7  25.9   3   3   1.9e-11     7e-08   31.6   7.1     2    34   166   198   165   200 0.95 Bacterial transferase hexapeptide (six repeats)
Hexapep_2            PF14602.1     34 sp|O34981|DAPH_BACSU -            236   4.1e-15   55.0  26.3   1   4   5.7e-05      0.21   11.1   0.3    14    32    98   118    92   120 0.79 Hexapeptide repeat of succinyl-transferase
Hexapep_2            PF14602.1     34 sp|O34981|DAPH_BACSU -            236   4.1e-15   55.0  26.3   3   4   4.3e-07    0.0016   17.9   0.8     2    19   140   158   139   158 0.85 Hexapeptide repeat of succinyl-transferase
Hexapep_2            PF14602.1     34 sp|O34981|DAPH_BACSU -            236   4.1e-15   55.0  26.3   4   4   3.4e-12   1.3e-08   34.2   6.7     1    32   165   198   165   199 0.92 Hexapeptide repeat of succinyl-transferase
Phage_holin_2        PF04550.7     90 sp|O34981|DAPH_BACSU -            236         2    8.5   7.8   1   2   0.00015      0.55   10.3   4.0    10    56   110   157   102   179 0.86 Phage holin family 2
Bac_DNA_binding      PF00216.16    90 sp|P08821|DBH1_BACSU -             92   1.6e-39  133.7   0.3   1   1   7.3e-43   1.8e-39  133.6   0.3     1    89     1    89     1    90 0.99 Bacterial DNA-binding protein
DUF4496              PF14908.1    140 sp|P08821|DBH1_BACSU -             92   0.00028   20.7   0.1   1   1   1.4e-07   0.00035   20.4   0.1    87   136     9    57     2    59 0.91 Domain of unknown function (DUF4496)
HU-DNA_bdg           PF14848.1    124 sp|P08821|DBH1_BACSU -             92    0.0093   15.6   0.0   1   1   1.1e-05     0.026   14.2   0.0    35    83     7    55     1    91 0.75 DNA-binding domain
SIS_2                PF13580.1    138 sp|P08821|DBH1_BACSU -             92     0.064   12.9   0.0   1   1   3.3e-05     0.081   12.6   0.0    14    46    18    50     4    60 0.81 SIS domain
DUF2267              PF10025.4    125 sp|P08821|DBH1_BACSU -             92     0.067   13.2   0.0   1   1   3.7e-05     0.093   12.8   0.0     3    40     4    40     1    46 0.60 Uncharacterized conserved protein (DUF2267)
VWA_3                PF13768.1    155 sp|P08821|DBH1_BACSU -             92      0.13   11.9   0.0   1   1   5.4e-05      0.13   11.9   0.0     6    47    10    53     6    88 0.82 von Willebrand factor type A domain
Bac_DNA_binding      PF00216.16    90 sp|P68573|DBH2_BACSU -             92   5.4e-37  125.7   1.3   1   1   1.6e-40   5.9e-37  125.5   1.3     1    90     1    90     1    90 0.99 Bacterial DNA-binding protein
DUF4496              PF14908.1    140 sp|P68573|DBH2_BACSU -             92   0.00034   20.5   0.0   1   1   1.1e-07   0.00042   20.2   0.0     8    58    28    86    25    92 0.78 Domain of unknown function (DUF4496)
SSPI                 PF14098.1     65 sp|P68573|DBH2_BACSU -             92     0.045   13.6   0.0   1   1   2.5e-05     0.092   12.6   0.0    15    40    24    49    12    55 0.85 Small, acid-soluble spore protein I
MetW                 PF07021.7    193 sp|P68573|DBH2_BACSU -             92      0.17   11.2   0.0   1   1   5.6e-05      0.21   10.9   0.0    95   131    32    66    22    76 0.84 Methionine biosynthesis protein MetW
DEAD                 PF00270.24   169 sp|P42305|DBPA_BACSU -            479   4.7e-46  156.3   0.2   1   2   4.1e-48   6.7e-45  152.6   0.2     1   169    26   192    26   192 0.95 DEAD/DEAH box helicase
Helicase_C           PF00271.26    78 sp|P42305|DBPA_BACSU -            479   9.4e-27   92.6   0.0   1   1   1.5e-29   2.4e-26   91.3   0.0     2    78   259   335   258   335 0.97 Helicase conserved C-terminal domain
DbpA                 PF03880.10    74 sp|P42305|DBPA_BACSU -            479   6.7e-20   70.5   1.6   1   1     1e-22   1.7e-19   69.2   1.6     2    74   405   477   404   477 0.97 DbpA RNA binding domain
ResIII               PF04851.10   184 sp|P42305|DBPA_BACSU -            479   1.2e-06   28.4   0.3   1   1   2.9e-09   4.8e-06   26.5   0.0     7   182    28   185     6   187 0.74 Type III restriction enzyme, res subunit
CMS1                 PF14617.1    252 sp|P42305|DBPA_BACSU -            479     8e-05   21.8   0.1   1   1   1.6e-07   0.00026   20.1   0.1   126   209    70   152    61   170 0.78 U3-containing 90S pre-ribosomal complex subunit
AAA_19               PF13245.1     76 sp|P42305|DBPA_BACSU -            479     0.018   14.8   0.0   1   1     7e-05      0.12   12.1   0.0     6    62    36    90    31   110 0.82 Part of AAA domain
T2SE                 PF00437.15   272 sp|P42305|DBPA_BACSU -            479     0.021   13.7   0.2   1   2   0.00028      0.47    9.3   0.0   115   155    27    66     8    99 0.76 Type II/IV secretion system protein
AAA_22               PF13401.1    131 sp|P42305|DBPA_BACSU -            479     0.058   13.5   0.0   1   1   9.2e-05      0.15   12.1   0.0     8   119    43   179    37   193 0.66 AAA domain
Helicase_RecD        PF05127.9    177 sp|P42305|DBPA_BACSU -            479     0.086   12.4   0.0   1   1   0.00015      0.24   11.0   0.0     1   100    43   154    43   186 0.71 Helicase
Orn_Arg_deC_N        PF02784.11   251 sp|P23630|DCDA_BACSU -            439   2.8e-86  288.8   0.1   1   1   7.3e-90   3.6e-86  288.4   0.1     1   250    37   297    37   298 0.99 Pyridoxal-dependent decarboxylase, pyridoxal binding domain
Orn_DAP_Arg_deC      PF00278.17   116 sp|P23630|DCDA_BACSU -            439   1.3e-21   76.4   0.0   1   1   5.2e-25   2.6e-21   75.5   0.0     6   116   306   409   239   409 0.89 Pyridoxal-dependent decarboxylase, C-terminal sheet domain
Ala_racemase_N       PF01168.15   218 sp|P23630|DCDA_BACSU -            439   0.00022   20.8   0.1   1   1   1.4e-07   0.00068   19.2   0.1     4   178    39   237    36   258 0.75 Alanine racemase, N-terminal domain
dNK                  PF01712.14   146 sp|P37529|DCK_BACSU  -            217   2.9e-47  160.2   0.2   1   1   6.4e-50   3.8e-47  159.8   0.2     1   145    62   207    62   208 0.99 Deoxynucleoside kinase
AAA_18               PF13238.1    129 sp|P37529|DCK_BACSU  -            217   1.1e-10   41.9   0.1   1   1     5e-13   2.9e-10   40.5   0.0     1   120    12   159    12   176 0.83 AAA domain
AAA_17               PF13207.1    121 sp|P37529|DCK_BACSU  -            217   1.4e-09   38.8   0.0   1   1   1.4e-11   8.5e-09   36.2   0.0     1   110    11   151    11   165 0.66 AAA domain
Thymidylate_kin      PF02223.12   186 sp|P37529|DCK_BACSU  -            217   4.9e-06   26.0   1.4   2   2   7.9e-07   0.00047   19.5   0.0    91   165   108   176   100   207 0.78 Thymidylate kinase
SKI                  PF01202.17   158 sp|P37529|DCK_BACSU  -            217   6.6e-06   26.0   0.4   1   1   5.5e-07   0.00033   20.5   0.4     2   125    19   164    18   212 0.72 Shikimate kinase
AAA_28               PF13521.1    163 sp|P37529|DCK_BACSU  -            217   0.00017   21.6   0.1   1   1   5.8e-07   0.00034   20.5   0.1     2    91    12   100    11   191 0.76 AAA domain
AAA_33               PF13671.1    143 sp|P37529|DCK_BACSU  -            217   0.00022   21.0   0.0   1   2   0.00038      0.22   11.3   0.0     2    27    12    37    11    92 0.86 AAA domain
UPF0079              PF02367.12   123 sp|P37529|DCK_BACSU  -            217   0.00052   19.6   0.0   1   1   1.8e-06    0.0011   18.5   0.0    12    75     6    71     3    96 0.78 Uncharacterised P-loop hydrolase UPF0079
ABC_tran             PF00005.22   137 sp|P37529|DCK_BACSU  -            217    0.0012   19.1   0.0   1   1   2.3e-06    0.0014   18.9   0.0     8    80     6   107     3   208 0.78 ABC transporter
DUF258               PF03193.11   161 sp|P37529|DCK_BACSU  -            217    0.0031   16.7   0.0   1   1   1.2e-05    0.0071   15.5   0.0    34    63     8    37     3    50 0.83 Protein of unknown function, DUF258
Cytidylate_kin2      PF13189.1    179 sp|P37529|DCK_BACSU  -            217    0.0072   16.2   0.5   1   1   6.6e-05     0.039   13.8   0.1     1    26    11    36    11   107 0.95 Cytidylate kinase-like family
AAA_22               PF13401.1    131 sp|P37529|DCK_BACSU  -            217    0.0073   16.4   0.3   1   1     2e-05     0.012   15.7   0.3     4    29     9    34     4   215 0.91 AAA domain
AAA_25               PF13481.1    194 sp|P37529|DCK_BACSU  -            217     0.011   15.2   0.1   1   1   5.9e-05     0.035   13.5   0.0    29    56     5    32     2    47 0.90 AAA domain
AAA_16               PF13191.1    185 sp|P37529|DCK_BACSU  -            217     0.012   15.6   0.0   1   1   6.4e-05     0.038   13.9   0.0    25    70    10    49     4    75 0.80 AAA ATPase domain
RNA_helicase         PF00910.17   107 sp|P37529|DCK_BACSU  -            217     0.015   15.4   0.0   1   1   8.9e-05     0.053   13.7   0.0     2    29    13    41    12    59 0.74 RNA helicase
AAA_14               PF13173.1    128 sp|P37529|DCK_BACSU  -            217     0.015   15.2   0.0   1   1   5.8e-05     0.034   14.0   0.0     2    36     9    49     8    84 0.59 AAA domain
PRK                  PF00485.13   194 sp|P37529|DCK_BACSU  -            217     0.037   13.5   0.0   1   1    0.0003      0.18   11.3   0.0     1    26    11    36    11    82 0.77 Phosphoribulokinase / Uridine kinase family
Arch_ATPase          PF01637.13   234 sp|P37529|DCK_BACSU  -            217     0.043   13.5   0.3   1   1    0.0001     0.062   12.9   0.0    20    82     9    81     3   126 0.75 Archaeal ATPase
GTP_EFTU             PF00009.22   188 sp|P37529|DCK_BACSU  -            217     0.056   12.8   0.0   1   1   0.00014     0.085   12.2   0.0     5    37    11    43     7    75 0.81 Elongation factor Tu GTP binding domain
AAA                  PF00004.24   132 sp|P37529|DCK_BACSU  -            217     0.062   13.4   0.0   1   1   0.00018      0.11   12.7   0.0     3    37    14    50    12    80 0.74 ATPase family associated with various cellular activities (AAA)
FtsK_SpoIIIE         PF01580.13   205 sp|P37529|DCK_BACSU  -            217     0.075   12.5   0.5   1   1   0.00023      0.14   11.6   0.1    33    71     4    42     2    43 0.88 FtsK/SpoIIIE family
MobB                 PF03205.9    140 sp|P37529|DCK_BACSU  -            217     0.081   12.6   1.0   1   1   0.00024      0.14   11.8   0.4     2    24    11    33    10    44 0.90 Molybdopterin guanine dinucleotide synthesis protein B
AAA_5                PF07728.9    139 sp|P37529|DCK_BACSU  -            217      0.11   12.1   0.0   1   1   0.00039      0.23   11.1   0.0     5    30    15    42    12    50 0.80 AAA domain (dynein-related subfamily)
SbcD_C               PF12320.3    100 sp|P37529|DCK_BACSU  -            217      0.12   12.4   0.4   1   1   0.00044      0.26   11.3   0.1     7    60   135   208   126   217 0.81 Type 5 capsule protein repressor C-terminal domain
AAA_24               PF13479.1    213 sp|P37529|DCK_BACSU  -            217      0.15   11.6   0.6   1   1   0.00054      0.32   10.5   0.6     2    27     8    33     7    40 0.87 AAA domain
SDF                  PF00375.13   390 sp|P96603|DCTA_BACSU -            421  8.7e-122  406.6  31.1   1   1  6.6e-126  9.8e-122  406.4  31.1     1   389     7   397     7   398 0.98 Sodium:dicarboxylate symporter family
SBP_bac_7            PF03480.8    286 sp|P96600|DCTB_BACSU -            350  5.4e-102  340.7   1.9   1   1  1.4e-105  6.7e-102  340.4   1.9     1   283    49   331    49   333 0.99 Bacterial extracellular solute-binding protein, family 7
Colicin-DNase        PF12639.2    110 sp|P96600|DCTB_BACSU -            350    0.0096   16.1   0.2   1   1   4.3e-06     0.022   15.0   0.2    38    84   267   312   234   327 0.83 DNase/tRNase domain of colicin-like bacteriocin
Rota_NS53            PF00981.12   488 sp|P96600|DCTB_BACSU -            350     0.043   12.4   1.5   1   1   1.3e-05     0.063   11.9   1.5   201   306   230   335   226   338 0.83 Rotavirus RNA-binding Protein 53 (NS53)
URO-D                PF01208.12   343 sp|P32395|DCUP_BACSU -            353  1.8e-118  395.3   0.0   1   1  1.4e-122  2.1e-118  395.1   0.0     2   343     7   343     6   343 0.97 Uroporphyrinogen decarboxylase (URO-D)
Dala_Dala_lig_C      PF07478.8    203 sp|P96612|DDL_BACSU  -            354   7.8e-80  267.0   0.0   1   1   6.6e-83   1.1e-79  266.5   0.0     1   203   135   338   135   338 0.98 D-ala D-ala ligase C-terminus
Dala_Dala_lig_N      PF01820.16   117 sp|P96612|DDL_BACSU  -            354   2.3e-34  118.2   0.0   1   1   2.4e-37   3.9e-34  117.4   0.0     7   116     2   117     1   118 0.92 D-ala D-ala ligase N-terminus
ATP-grasp_4          PF13535.1    184 sp|P96612|DDL_BACSU  -            354   1.9e-19   70.1   0.0   1   1   1.7e-22   2.8e-19   69.5   0.0     3   176   127   307   125   311 0.91 ATP-grasp domain
ATP-grasp            PF02222.17   172 sp|P96612|DDL_BACSU  -            354   3.7e-12   45.9   0.0   1   1   3.9e-15   6.4e-12   45.1   0.0    17   158   159   307   136   310 0.83 ATP-grasp domain
CPSase_L_D2          PF02786.12   211 sp|P96612|DDL_BACSU  -            354   8.6e-11   41.5   0.0   1   1   8.2e-14   1.3e-10   40.8   0.0    27   178   159   308   128   309 0.84 Carbamoyl-phosphate synthase L chain, ATP binding domain
RimK                 PF08443.6    190 sp|P96612|DDL_BACSU  -            354   6.9e-05   22.4   0.0   1   1   7.3e-08   0.00012   21.6   0.0    28   176   160   317   127   328 0.78 RimK-like ATP-grasp domain
GARS_A               PF01071.14   194 sp|P96612|DDL_BACSU  -            354   0.00015   21.3   0.0   1   1   1.4e-07   0.00024   20.7   0.0     2   100   128   226   127   304 0.82 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain
ATPgrasp_ST          PF14397.1    285 sp|P96612|DDL_BACSU  -            354   0.00033   19.8   0.0   1   2   4.5e-05     0.075   12.1   0.0    26   125   128   215   124   219 0.61 Sugar-transfer associated ATP-grasp
ATP-grasp_3          PF02655.9    161 sp|P96612|DDL_BACSU  -            354   0.00035   20.4   0.0   1   1     7e-07    0.0012   18.7   0.0     7   155   146   307   143   311 0.72 ATP-grasp domain
Pep_deformylase      PF01327.16   157 sp|P94462|DEF1_BACSU -            160   1.8e-49  167.1   0.0   1   1   1.4e-53     2e-49  166.9   0.0     1   153     3   148     3   152 0.96 Polypeptide deformylase
Pep_deformylase      PF01327.16   157 sp|Q45495|DEF2_BACSU -            184   4.3e-46  156.1   0.0   1   1   3.3e-50   4.9e-46  155.9   0.0     1   155     4   171     4   173 0.95 Polypeptide deformylase
DegQ                 PF08181.6     46 sp|Q99039|DEGQ_BACSU -             46   1.5e-27   95.0   5.7   1   1   4.3e-31   1.6e-27   94.9   5.7     1    46     1    46     1    46 0.99 DegQ (SacQ) family
Microtub_assoc       PF07989.6     75 sp|Q99039|DEGQ_BACSU -             46    0.0074   16.0   1.7   2   2   3.5e-05      0.13   12.1   0.0     1    21    25    45    25    46 0.94 Microtubule associated
XhlA                 PF10779.4     71 sp|Q99039|DEGQ_BACSU -             46     0.042   13.7   0.4   1   1   1.3e-05     0.049   13.5   0.4     2    32     6    43     5    46 0.85 Haemolysin XhlA
Metalloenzyme        PF01676.13   252 sp|P46353|DEOB_BACSU -            394   2.6e-61  207.1   0.1   1   1   8.2e-65     3e-61  206.9   0.1     2   251     8   388     7   389 0.97 Metalloenzyme superfamily
Phosphodiest         PF01663.17   365 sp|P46353|DEOB_BACSU -            394   0.00098   18.5   0.1   1   1   3.8e-07    0.0014   18.0   0.1   174   255   264   340    74   374 0.81 Type I phosphodiesterase / nucleotide pyrophosphatase
Sulfatase            PF00884.18   308 sp|P46353|DEOB_BACSU -            394     0.012   14.7   0.1   2   2   1.9e-05     0.069   12.3   0.0   208   303   295   375   207   379 0.78 Sulfatase
Protocadherin        PF08374.6    221 sp|P46353|DEOB_BACSU -            394      0.14   11.8   0.0   1   1   5.4e-05       0.2   11.2   0.0   177   211   352   386   344   392 0.86 Protocadherin
DeoC                 PF01791.4    236 sp|P39121|DEOC_BACSU -            223   9.6e-58  195.2   8.7   1   1   2.2e-61   1.1e-57  195.0   8.7     3   235     4   213     2   214 0.96 DeoC/LacD family aldolase
DHO_dh               PF01180.16   295 sp|P39121|DEOC_BACSU -            223    0.0056   15.6   1.7   2   2   1.8e-06    0.0089   15.0   0.3   234   272   167   205   160   214 0.88 Dihydroorotate dehydrogenase
PNP_UDP_1            PF01048.15   234 sp|O34925|DEOD_BACSU -            233   5.4e-41  140.1   0.1   1   1   4.4e-45   6.5e-41  139.8   0.1     2   216    15   218    14   230 0.88 Phosphorylase superfamily
Sugar-bind           PF04198.8    255 sp|P39140|DEOR_BACSU -            313   2.8e-82  275.4   0.0   1   1     1e-84   3.5e-82  275.1   0.0     2   255    57   311    56   311 0.97 Putative sugar-binding domain
HTH_24               PF13412.1     48 sp|P39140|DEOR_BACSU -            313   6.9e-08   31.7   0.1   1   1   1.4e-09   4.8e-07   29.0   0.0    17    48    20    51    15    51 0.92 Winged helix-turn-helix DNA-binding
MarR_2               PF12802.2     62 sp|P39140|DEOR_BACSU -            313   6.2e-07   29.0   0.0   1   1   1.2e-08   4.2e-06   26.3   0.0    21    54    20    53     6    60 0.88 MarR family
HTH_23               PF13384.1     50 sp|P39140|DEOR_BACSU -            313   9.8e-07   28.2   0.1   1   1   6.5e-09   2.2e-06   27.1   0.1     9    45    11    48     1    52 0.83 Homeodomain-like domain
Sigma70_r4           PF04545.11    50 sp|P39140|DEOR_BACSU -            313   1.2e-06   27.6   0.2   1   1   1.2e-08   4.3e-06   25.9   0.2    14    47    14    47     5    47 0.95 Sigma-70, region 4
HTH_28               PF13518.1     52 sp|P39140|DEOR_BACSU -            313   9.7e-06   25.4   0.2   1   1   7.8e-08   2.7e-05   24.0   0.2     4    41    11    49    10    52 0.84 Helix-turn-helix domain
HTH_37               PF13744.1     80 sp|P39140|DEOR_BACSU -            313   1.2e-05   24.9   1.4   1   1   2.5e-07   8.6e-05   22.2   0.3    16    54     5    43     2    49 0.91 Helix-turn-helix domain
Sigma70_r4_2         PF08281.7     54 sp|P39140|DEOR_BACSU -            313   2.5e-05   23.6   0.1   1   1   1.7e-07     6e-05   22.4   0.1    21    53    15    47    11    47 0.94 Sigma-70, region 4
HTH_Crp_2            PF13545.1     76 sp|P39140|DEOR_BACSU -            313   3.3e-05   23.6   0.0   1   1   2.4e-07   8.3e-05   22.3   0.0    20    60    12    52     2    57 0.86 Crp-like helix-turn-helix domain
HTH_3                PF01381.17    55 sp|P39140|DEOR_BACSU -            313   4.1e-05   23.3   1.1   1   1   8.9e-07   0.00031   20.5   0.4     1    29    10    40    10    43 0.94 Helix-turn-helix
UPF0122              PF04297.9    101 sp|P39140|DEOR_BACSU -            313   0.00023   21.0   0.3   1   1   1.8e-06   0.00062   19.7   0.3    26    55    13    42     4    47 0.83 Putative helix-turn-helix protein, YlxM / p13 like
Fe_dep_repress       PF01325.14    60 sp|P39140|DEOR_BACSU -            313   0.00025   20.9   0.0   1   1   1.6e-06   0.00057   19.7   0.0    24    53    22    51    18    54 0.92 Iron dependent repressor, N-terminal DNA binding domain
MarR                 PF01047.17    59 sp|P39140|DEOR_BACSU -            313   0.00036   20.1   0.0   1   1   2.1e-06   0.00071   19.2   0.0    11    40    14    43    13    51 0.85 MarR family
HTH_11               PF08279.7     55 sp|P39140|DEOR_BACSU -            313   0.00044   19.8   0.0   1   1   3.8e-06    0.0013   18.3   0.0    14    44    19    50    12    54 0.85 HTH domain
HTH_38               PF13936.1     44 sp|P39140|DEOR_BACSU -            313   0.00061   19.2   0.3   1   1   6.6e-06    0.0023   17.4   0.1    15    41    14    41     2    42 0.80 Helix-turn-helix domain
HTH_IclR             PF09339.5     52 sp|P39140|DEOR_BACSU -            313   0.00071   19.1   0.0   1   1   4.6e-06    0.0016   18.0   0.0    20    48    22    50    17    51 0.88 IclR helix-turn-helix domain
HTH_7                PF02796.10    45 sp|P39140|DEOR_BACSU -            313    0.0012   18.6   1.0   1   1   1.1e-05    0.0038   17.0   0.2    14    41    12    40     3    42 0.80 Helix-turn-helix domain of resolvase
HTH_10               PF04967.7     53 sp|P39140|DEOR_BACSU -            313    0.0013   18.3   0.0   1   1   4.7e-05     0.016   14.7   0.0    24    50    21    47    16    47 0.90 HTH DNA binding domain
DUF134               PF02001.11   106 sp|P39140|DEOR_BACSU -            313    0.0016   18.3   0.0   1   1   1.2e-05     0.004   17.0   0.0    47    84    10    47     6    52 0.94 Protein of unknown function  DUF134
Terminase_5          PF06056.7     58 sp|P39140|DEOR_BACSU -            313    0.0018   17.8   0.2   1   1   1.4e-05    0.0047   16.4   0.1     5    35    12    42     9    56 0.77 Putative ATPase subunit of terminase (gpP-like)
TrmB                 PF01978.14    68 sp|P39140|DEOR_BACSU -            313    0.0026   17.4   0.0   1   1   1.9e-05    0.0064   16.1   0.0    26    56    24    54    15    59 0.89 Sugar-specific transcriptional regulator TrmB
GntR                 PF00392.16    64 sp|P39140|DEOR_BACSU -            313    0.0036   16.7   0.0   1   1   1.9e-05    0.0066   15.8   0.0    26    59    22    55    10    59 0.92 Bacterial regulatory proteins, gntR family
HTH_36               PF13730.1     55 sp|P39140|DEOR_BACSU -            313    0.0044   17.1   0.0   1   1   2.8e-05    0.0095   16.0   0.0    27    55    22    50     7    50 0.91 Helix-turn-helix domain
GerE                 PF00196.14    58 sp|P39140|DEOR_BACSU -            313     0.011   14.9   0.0   1   1   0.00017     0.057   12.7   0.0    19    37    21    39    15    47 0.83 Bacterial regulatory proteins, luxR family
HTH_6                PF01418.12    77 sp|P39140|DEOR_BACSU -            313     0.013   15.1   0.0   1   1     9e-05     0.031   14.0   0.0    35    68    21    54    17    56 0.90 Helix-turn-helix domain, rpiR family
HTH_29               PF13551.1    112 sp|P39140|DEOR_BACSU -            313     0.017   15.2   0.0   1   1   0.00012     0.041   14.0   0.0     6    41    15    49    10    56 0.80 Winged helix-turn helix
Rrf2                 PF02082.15    83 sp|P39140|DEOR_BACSU -            313     0.017   15.2   0.1   1   1    0.0001     0.036   14.1   0.1    23    57    18    52     8    54 0.87 Transcriptional regulator
HTH_Tnp_4            PF13613.1     53 sp|P39140|DEOR_BACSU -            313     0.017   14.6   0.2   1   1   0.00038      0.13   11.8   0.0    15    40    16    41    14    45 0.89 Helix-turn-helix of DDE superfamily endonuclease
DeoRC                PF00455.17   162 sp|P39140|DEOR_BACSU -            313     0.018   14.6   0.0   1   1   0.00012     0.043   13.4   0.0    11    43    99   131    96   162 0.89 DeoR C terminal sensor domain
HTH_30               PF13556.1     59 sp|P39140|DEOR_BACSU -            313     0.028   14.0   0.0   1   1   0.00017      0.06   12.9   0.0     3    33    11    41     9    48 0.86 PucR C-terminal helix-turn-helix domain
Crp                  PF00325.15    32 sp|P39140|DEOR_BACSU -            313     0.028   13.8   0.0   1   1   0.00024     0.081   12.4   0.0     4    30    22    48    20    49 0.89 Bacterial regulatory proteins, crp family
HTH_5                PF01022.15    47 sp|P39140|DEOR_BACSU -            313      0.03   13.9   0.0   1   1   0.00026     0.088   12.4   0.0    19    45    24    50    18    51 0.82 Bacterial regulatory protein, arsR family
Sigma70_ECF          PF07638.6    185 sp|P39140|DEOR_BACSU -            313     0.032   13.8   0.0   1   1   0.00036      0.12   11.9   0.0   148   180    17    49     3    54 0.82 ECF sigma factor
HTH_Tnp_ISL3         PF13542.1     52 sp|P39140|DEOR_BACSU -            313     0.035   13.2   0.0   1   1    0.0021      0.73    9.0   0.0    27    49    21    42    19    44 0.89 Helix-turn-helix domain of transposase family ISL3
HTH_26               PF13443.1     63 sp|P39140|DEOR_BACSU -            313     0.048   13.8   0.0   1   1   0.00061      0.21   11.8   0.0    10    32    20    42    14    69 0.87 Cro/C1-type HTH DNA-binding domain
DUF2316              PF10078.4     89 sp|P39140|DEOR_BACSU -            313     0.053   13.5   0.0   1   1   0.00068      0.24   11.4   0.0    10    47     7    44     2    61 0.81 Uncharacterized protein conserved in bacteria (DUF2316)
HTH_22               PF13309.1     64 sp|P39140|DEOR_BACSU -            313     0.056   13.2   0.0   1   1   0.00041      0.14   11.9   0.0    44    63    22    41    18    42 0.86 HTH domain
HTH_17               PF12728.2     51 sp|P39140|DEOR_BACSU -            313     0.058   13.6   0.0   1   1   0.00048      0.17   12.1   0.0     2    23    21    42    21    54 0.87 Helix-turn-helix domain
HTH_31               PF13560.1     64 sp|P39140|DEOR_BACSU -            313      0.07   13.3   0.1   1   1   0.00051      0.18   12.0   0.1    15    36    21    42     8    51 0.90 Helix-turn-helix domain
HTH_40               PF14493.1     91 sp|P39140|DEOR_BACSU -            313      0.08   13.1   0.0   1   1    0.0019      0.65   10.2   0.0     4    47    11    53     8    73 0.76 Helix-turn-helix domain
FeoC                 PF09012.5     69 sp|P39140|DEOR_BACSU -            313     0.092   12.4   0.0   1   1   0.00064      0.22   11.2   0.0    14    46    20    52    13    60 0.88 FeoC like transcriptional regulator
HTH_AsnC-type        PF13404.1     42 sp|P39140|DEOR_BACSU -            313      0.11   12.1   0.0   1   1   0.00068      0.23   11.0   0.0    19    36    22    39    15    42 0.91 AsnC-type helix-turn-helix domain
HTH_27               PF13463.1     68 sp|P39140|DEOR_BACSU -            313      0.11   12.8   0.0   1   1    0.0011      0.37   11.1   0.0    21    49    23    51    17    56 0.91 Winged helix DNA-binding domain
MMR_HSR1             PF01926.18   116 sp|P50743|DER_BACSU  -            436     5e-52  174.7   1.6   1   2   1.1e-26   5.2e-24   84.4   0.0     2   116     6   120     5   120 0.86 50S ribosome-binding GTPase
MMR_HSR1             PF01926.18   116 sp|P50743|DER_BACSU  -            436     5e-52  174.7   1.6   2   2   3.6e-28   1.7e-25   89.2   0.2     2   116   178   295   177   295 0.88 50S ribosome-binding GTPase
KH_dom-like          PF14714.1     80 sp|P50743|DER_BACSU  -            436   1.6e-37  127.2   0.1   2   2   9.8e-39   4.6e-36  122.6   0.1     1    80   353   433   353   433 0.98 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal
FeoB_N               PF02421.13   156 sp|P50743|DER_BACSU  -            436   2.5e-27   95.0   0.2   1   2   1.7e-13   8.1e-11   41.4   0.0     3   126     6   132     4   149 0.85 Ferrous iron transport protein B
FeoB_N               PF02421.13   156 sp|P50743|DER_BACSU  -            436   2.5e-27   95.0   0.2   2   2   1.3e-16   6.1e-14   51.5   0.1     2   154   177   341   176   343 0.80 Ferrous iron transport protein B
GTP_EFTU             PF00009.22   188 sp|P50743|DER_BACSU  -            436   4.4e-26   91.4   0.4   1   2     2e-12   9.4e-10   38.2   0.0     7   187     7   164     3   165 0.76 Elongation factor Tu GTP binding domain
GTP_EFTU             PF00009.22   188 sp|P50743|DER_BACSU  -            436   4.4e-26   91.4   0.4   2   2     5e-14   2.3e-11   43.4   0.3     3   185   175   346   173   349 0.77 Elongation factor Tu GTP binding domain
Miro                 PF08477.8    119 sp|P50743|DER_BACSU  -            436   1.6e-15   57.6   0.1   1   2   1.2e-09   5.6e-07   30.0   0.0     2   119     6   122     5   122 0.83 Miro-like protein
Miro                 PF08477.8    119 sp|P50743|DER_BACSU  -            436   1.6e-15   57.6   0.1   2   2   3.7e-08   1.7e-05   25.2   0.1     2   116   178   294   177   297 0.61 Miro-like protein
Dynamin_N            PF00350.18   168 sp|P50743|DER_BACSU  -            436     5e-12   45.9   1.8   1   4   0.00011     0.053   13.3   0.0     1    30     6    35     6    43 0.87 Dynamin family
Dynamin_N            PF00350.18   168 sp|P50743|DER_BACSU  -            436     5e-12   45.9   1.8   3   4   1.9e-05    0.0089   15.8   0.1     3    36   180   214   179   224 0.78 Dynamin family
AIG1                 PF04548.11   212 sp|P50743|DER_BACSU  -            436   5.2e-12   45.3   0.5   1   2     2e-06   0.00094   18.3   0.0     4   107     7   107     5   111 0.88 AIG1 family
AIG1                 PF04548.11   212 sp|P50743|DER_BACSU  -            436   5.2e-12   45.3   0.5   2   2   2.8e-08   1.3e-05   24.4   0.3     4   103   179   278   176   320 0.78 AIG1 family
DUF258               PF03193.11   161 sp|P50743|DER_BACSU  -            436   1.8e-08   33.7   0.0   1   2    0.0015      0.69    9.0   0.0    37    60     5    28     1    62 0.84 Protein of unknown function, DUF258
DUF258               PF03193.11   161 sp|P50743|DER_BACSU  -            436   1.8e-08   33.7   0.0   2   2   2.1e-07   9.8e-05   21.5   0.0    38   102   178   238   158   257 0.79 Protein of unknown function, DUF258
Ras                  PF00071.17   162 sp|P50743|DER_BACSU  -            436   7.3e-07   28.7   1.2   1   2   0.00017      0.08   12.3   0.0     2   120     6   127     5   132 0.80 Ras family
Ras                  PF00071.17   162 sp|P50743|DER_BACSU  -            436   7.3e-07   28.7   1.2   2   2   9.8e-05     0.045   13.1   0.5     3   158   179   345   177   349 0.54 Ras family
PduV-EutP            PF10662.4    143 sp|P50743|DER_BACSU  -            436   2.2e-06   27.2   0.1   1   2   2.1e-05    0.0095   15.4   0.0     4   141     6   159     3   161 0.82 Ethanolamine utilisation - propanediol utilisation
RNA_helicase         PF00910.17   107 sp|P50743|DER_BACSU  -            436   5.4e-06   26.5   0.0   2   2   1.1e-05    0.0052   16.9   0.0     2    66   179   239   178   254 0.82 RNA helicase
ABC_tran             PF00005.22   137 sp|P50743|DER_BACSU  -            436   1.2e-05   25.6   0.0   1   2   0.00042      0.19   12.0   0.0    13    36     5    28     2    83 0.90 ABC transporter
ABC_tran             PF00005.22   137 sp|P50743|DER_BACSU  -            436   1.2e-05   25.6   0.0   2   2   0.00081      0.38   11.0   0.1    15    79   179   242   172   318 0.64 ABC transporter
Arf                  PF00025.16   175 sp|P50743|DER_BACSU  -            436   2.1e-05   23.8   0.5   1   2   4.9e-06    0.0023   17.2   0.0    18   129     7   125     3   132 0.83 ADP-ribosylation factor family
AAA_17               PF13207.1    121 sp|P50743|DER_BACSU  -            436   7.7e-05   23.4   0.1   1   2   3.9e-05     0.018   15.8   0.0     1    37     5    63     5   125 0.67 AAA domain
SRPRB                PF09439.5    181 sp|P50743|DER_BACSU  -            436   0.00036   19.7   0.0   1   2   0.00028      0.13   11.4   0.0     3    86     3    93     1   129 0.59 Signal recognition particle receptor beta subunit
AAA                  PF00004.24   132 sp|P50743|DER_BACSU  -            436   0.00041   20.5   0.3   2   2   0.00059      0.27   11.4   0.2     2    74   179   303   178   351 0.69 ATPase family associated with various cellular activities (AAA)
AAA_18               PF13238.1    129 sp|P50743|DER_BACSU  -            436   0.00052   20.3   0.1   1   2   0.00054      0.25   11.6   0.0     1    23     6    36     6   118 0.68 AAA domain
cobW                 PF02492.14   178 sp|P50743|DER_BACSU  -            436    0.0017   17.8   5.9   3   3   1.7e-05    0.0081   15.6   0.7    84   172   222   315   202   321 0.73 CobW/HypB/UreG, nucleotide-binding domain
MobB                 PF03205.9    140 sp|P50743|DER_BACSU  -            436    0.0024   17.5   0.2   1   2    0.0008      0.37   10.4   0.0     1    21     4    24     4    29 0.91 Molybdopterin guanine dinucleotide synthesis protein B
AAA_14               PF13173.1    128 sp|P50743|DER_BACSU  -            436      0.01   15.7   0.0   1   2    0.0013      0.62    9.9   0.0     2    28     3    37     2   132 0.76 AAA domain
AAA_5                PF07728.9    139 sp|P50743|DER_BACSU  -            436     0.023   14.3   0.0   1   1   0.00045      0.21   11.3   0.0     2    61   178   234   177   261 0.91 AAA domain (dynein-related subfamily)
DUF1194              PF06707.6    206 sp|P50743|DER_BACSU  -            436     0.034   13.1   0.0   1   1   0.00021     0.095   11.6   0.0   143   188   358   403   346   419 0.83 Protein of unknown function (DUF1194)
FA_desaturase        PF00487.19   257 sp|O34653|DES_BACSU  -            352     1e-38  133.2  13.0   1   1   3.5e-42     1e-38  133.2  13.0     4   242    55   295    51   300 0.89 Fatty acid desaturase
DUF2107              PF09880.4     76 sp|O34653|DES_BACSU  -            352     0.047   13.5   0.7   1   1   1.6e-05     0.047   13.5   0.7    13    62    17    70    13    78 0.68 Predicted membrane protein (DUF2107)
Tic20                PF09685.5    109 sp|O34653|DES_BACSU  -            352     0.071   13.0   6.8   2   2   0.00013      0.37   10.7   0.2    16    90   155   229   139   242 0.63 Tic20-like protein
Rhomboid             PF01694.17   146 sp|O34653|DES_BACSU  -            352      0.13   12.3   6.0   1   2   1.5e-05     0.046   13.7   1.5   100   145    57   109    20   110 0.65 Rhomboid family
MFS_1                PF07690.11   352 sp|O34653|DES_BACSU  -            352         5    5.7  14.2   2   2   4.8e-05      0.14   10.8   0.9   138   175   194   231   185   276 0.83 Major Facilitator Superfamily
dNK                  PF01712.14   146 sp|P37530|DGK_BACSU  -            207   2.5e-38  131.2   0.7   1   1   4.7e-41   3.3e-38  130.8   0.7     1   141    57   198    57   203 0.96 Deoxynucleoside kinase
AAA_18               PF13238.1    129 sp|P37530|DGK_BACSU  -            207   9.9e-15   54.9   0.0   1   1   2.5e-17   1.7e-14   54.2   0.0     1   121     7   151     7   159 0.91 AAA domain
AAA_33               PF13671.1    143 sp|P37530|DGK_BACSU  -            207   1.3e-10   41.3   0.0   1   1   2.6e-13   1.9e-10   40.8   0.0     2   134     7   156     6   165 0.79 AAA domain
AAA_17               PF13207.1    121 sp|P37530|DGK_BACSU  -            207   2.2e-09   38.1   0.0   1   1   5.3e-12   3.7e-09   37.4   0.0     2   110     7   142     6   192 0.68 AAA domain
Thymidylate_kin      PF02223.12   186 sp|P37530|DGK_BACSU  -            207     7e-09   35.3   0.6   1   1   9.7e-11   6.8e-08   32.0   0.6     1   151     9   156     9   189 0.72 Thymidylate kinase
AAA_28               PF13521.1    163 sp|P37530|DGK_BACSU  -            207   3.2e-05   23.9   0.0   1   1     7e-08   4.9e-05   23.3   0.0     2    95     7   102     6   130 0.80 AAA domain
SKI                  PF01202.17   158 sp|P37530|DGK_BACSU  -            207   4.7e-05   23.3   0.1   1   2   0.00015      0.11   12.4   0.0     2    21    14    33    13    39 0.93 Shikimate kinase
Cytidylate_kin2      PF13189.1    179 sp|P37530|DGK_BACSU  -            207    0.0037   17.1   0.0   1   1   2.3e-05     0.016   15.1   0.0     2    30     7    35     6   161 0.89 Cytidylate kinase-like family
AAA_14               PF13173.1    128 sp|P37530|DGK_BACSU  -            207    0.0067   16.3   0.3   1   2   3.7e-05     0.026   14.4   0.1     3    41     5    42     3   157 0.58 AAA domain
AAA_22               PF13401.1    131 sp|P37530|DGK_BACSU  -            207     0.012   15.7   0.0   1   1     3e-05     0.021   14.9   0.0     3    28     3    28     1   182 0.92 AAA domain
AAA                  PF00004.24   132 sp|P37530|DGK_BACSU  -            207     0.015   15.4   0.0   1   1   4.1e-05     0.029   14.5   0.0     3    28     9    34     7    54 0.89 ATPase family associated with various cellular activities (AAA)
UPF0079              PF02367.12   123 sp|P37530|DGK_BACSU  -            207      0.03   13.9   0.0   1   1     6e-05     0.043   13.4   0.0    16    41     5    30     1    95 0.89 Uncharacterised P-loop hydrolase UPF0079
CoaE                 PF01121.15   180 sp|P37530|DGK_BACSU  -            207      0.04   13.3   0.0   1   1   0.00011     0.075   12.4   0.0     3    28     7    33     5    37 0.91 Dephospho-CoA kinase
ABC_tran             PF00005.22   137 sp|P37530|DGK_BACSU  -            207     0.042   14.1   0.0   1   1   0.00012     0.083   13.1   0.0    13    34     6    27     1    76 0.85 ABC transporter
AAA_23               PF13476.1    202 sp|P37530|DGK_BACSU  -            207     0.043   14.1   3.5   1   1     0.001      0.72   10.1   3.5    20    45     5    30     3   205 0.40 AAA domain
NACHT                PF05729.7    166 sp|P37530|DGK_BACSU  -            207     0.047   13.3   0.2   1   1   0.00025      0.18   11.4   0.0     3    23     7    27     6    35 0.90 NACHT domain
PRK                  PF00485.13   194 sp|P37530|DGK_BACSU  -            207       0.1   12.1   0.0   1   1   0.00038      0.27   10.7   0.0     1    31     6    36     6    91 0.82 Phosphoribulokinase / Uridine kinase family
cobW                 PF02492.14   178 sp|P37530|DGK_BACSU  -            207      0.13   11.7   0.0   1   1   0.00029       0.2   11.0   0.0     2    21     6    25     5    98 0.86 CobW/HypB/UreG, nucleotide-binding domain
AAA_19               PF13245.1     76 sp|P37530|DGK_BACSU  -            207      0.17   11.6   0.1   1   1   0.00048      0.34   10.6   0.1    11    28     5    21     2    28 0.81 Part of AAA domain
Semialdhyde_dhC      PF02774.13   184 sp|Q04797|DHAS_BACSU -            346   2.9e-62  209.7   0.0   1   1   2.6e-65   4.3e-62  209.2   0.0     1   184   139   327   139   327 0.98 Semialdehyde dehydrogenase, dimerisation domain
Semialdhyde_dh       PF01118.19   121 sp|Q04797|DHAS_BACSU -            346   5.6e-34  117.0   0.1   1   1   7.1e-37   1.2e-33  116.0   0.1     2   120     7   120     6   121 0.97 Semialdehyde dehydrogenase, NAD binding domain
NAD_binding_10       PF13460.1    183 sp|Q04797|DHAS_BACSU -            346   3.4e-06   27.2   0.1   1   2   1.7e-05     0.027   14.4   0.0     1    26     7    32     7    64 0.80 NADH(P)-binding
NAD_binding_10       PF13460.1    183 sp|Q04797|DHAS_BACSU -            346   3.4e-06   27.2   0.1   2   2   0.00031      0.52   10.2   0.0     1    36    69   107    69   126 0.81 NADH(P)-binding
Gp_dh_C              PF02800.15   157 sp|Q04797|DHAS_BACSU -            346      0.01   15.2   0.1   1   1     2e-05     0.033   13.6   0.0    67   110   233   277   223   289 0.85 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain
Ldh_1_N              PF00056.18   141 sp|Q04797|DHAS_BACSU -            346     0.012   15.4   0.3   1   1   2.3e-05     0.039   13.7   0.3     2    37     6    42     5   128 0.85 lactate/malate dehydrogenase, NAD binding domain
DXP_reductoisom      PF02670.11   129 sp|Q04797|DHAS_BACSU -            346     0.032   14.7   0.2   1   1   9.9e-05      0.16   12.4   0.0     1    32     7    36     7    60 0.81 1-deoxy-D-xylulose 5-phosphate reductoisomerase
DapB_N               PF01113.15   124 sp|Q04797|DHAS_BACSU -            346      0.04   13.8   0.3   1   1   7.4e-05      0.12   12.2   0.3     2    55     6    54     5   114 0.61 Dihydrodipicolinate reductase, N-terminus
NmrA                 PF05368.8    233 sp|Q04797|DHAS_BACSU -            346     0.048   12.9   0.1   1   1   5.4e-05     0.089   12.0   0.1     1    74     7    99     7   108 0.73 NmrA-like family
Peptidase_M15_3      PF08291.6    110 sp|Q04797|DHAS_BACSU -            346      0.11   12.3   0.0   1   1   0.00015      0.25   11.1   0.0     5    52   110   157   107   167 0.86 Peptidase M15
AlaDh_PNT_C          PF01262.16   168 sp|Q08352|DHA_BACSU  -            378   5.6e-53  178.9   3.0   1   1     1e-55   8.4e-53  178.3   3.0     1   168   147   296   147   296 0.98 Alanine dehydrogenase/PNT, C-terminal domain
AlaDh_PNT_N          PF05222.10   136 sp|Q08352|DHA_BACSU  -            378   7.7e-49  165.1   0.1   1   1   2.5e-51   2.1e-48  163.7   0.0     1   136     4   135     4   135 0.99 Alanine dehydrogenase/PNT, N-terminal domain
2-Hacid_dh_C         PF02826.14   178 sp|Q08352|DHA_BACSU  -            378   1.8e-08   33.7   0.5   1   1   5.2e-11   4.3e-08   32.5   0.2    35   134   165   275   157   291 0.84 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain
Pyr_redox            PF00070.22    80 sp|Q08352|DHA_BACSU  -            378   2.6e-07   30.9   0.3   1   1   1.4e-09   1.2e-06   28.8   0.2     1    49   168   216   168   224 0.88 Pyridine nucleotide-disulphide oxidoreductase
Shikimate_DH         PF01488.15   135 sp|Q08352|DHA_BACSU  -            378   3.9e-07   30.2   0.2   1   1   1.1e-09   8.8e-07   29.0   0.2    11   110   165   267   159   285 0.84 Shikimate / quinate 5-dehydrogenase
F420_oxidored        PF03807.12    96 sp|Q08352|DHA_BACSU  -            378   1.8e-05   25.0   1.3   1   1   6.4e-08   5.3e-05   23.5   1.3     1    94   168   266   168   268 0.87 NADP oxidoreductase coenzyme F420-dependent
TrkA_N               PF02254.13   116 sp|Q08352|DHA_BACSU  -            378   2.8e-05   24.0   1.2   1   1   3.4e-08   2.8e-05   24.0   1.2     1    89   169   259   169   270 0.80 TrkA-N domain
NAD_binding_2        PF03446.10   163 sp|Q08352|DHA_BACSU  -            378     8e-05   22.5   1.1   1   1     2e-07   0.00016   21.5   0.7     3    93   168   265   166   269 0.80 NAD binding domain of 6-phosphogluconate dehydrogenase
3HCDH_N              PF02737.13   180 sp|Q08352|DHA_BACSU  -            378   8.2e-05   22.3   0.3   1   1   2.1e-07   0.00017   21.2   0.3     1    50   168   217   168   257 0.87 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain
Pyr_redox_2          PF07992.9    201 sp|Q08352|DHA_BACSU  -            378    0.0003   20.7   0.2   1   1   6.4e-07   0.00053   19.9   0.2     1    48   168   219   168   295 0.72 Pyridine nucleotide-disulphide oxidoreductase
NAD_binding_7        PF13241.1    103 sp|Q08352|DHA_BACSU  -            378   0.00097   19.3   0.3   1   1   2.3e-06    0.0019   18.4   0.3     7    68   166   237   163   269 0.74 Putative NAD(P)-binding
GIDA                 PF01134.17   392 sp|Q08352|DHA_BACSU  -            378    0.0095   14.8   0.1   1   1   1.9e-05     0.016   14.1   0.1     1    38   168   205   168   225 0.89 Glucose inhibited division protein A
UDPG_MGDP_dh_N       PF03721.9    185 sp|Q08352|DHA_BACSU  -            378     0.011   15.1   1.6   1   1   4.5e-05     0.037   13.4   1.4     2    40   168   206   167   263 0.89 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain
XdhC_C               PF13478.1    136 sp|Q08352|DHA_BACSU  -            378     0.014   15.7   0.1   1   1   3.1e-05     0.025   14.8   0.1     1    42   169   210   169   289 0.85 XdhC Rossmann domain
NAD_Gly3P_dh_N       PF01210.18   157 sp|Q08352|DHA_BACSU  -            378     0.015   15.0   1.8   1   1   4.7e-05     0.038   13.7   1.8     1    95   168   258   168   282 0.77 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus
Methyltransf_31      PF13847.1    152 sp|Q08352|DHA_BACSU  -            378     0.067   12.7   0.0   1   1   0.00018      0.15   11.6   0.0    13   112   173   268   173   327 0.77 Methyltransferase domain
BacA                 PF02673.13   259 sp|Q08352|DHA_BACSU  -            378     0.097   11.8   0.1   1   1   0.00023      0.19   10.8   0.1   156   180   158   182   140   186 0.91 Bacitracin resistance protein BacA
DAO                  PF01266.19   358 sp|Q08352|DHA_BACSU  -            378      0.17   10.7   3.8   1   1   0.00019      0.16   10.8   2.1     2    29   169   196   168   200 0.94 FAD dependent oxidoreductase
adh_short            PF00106.20   167 sp|P39071|DHBA_BACSU -            261   6.4e-38  130.2   1.6   1   1   4.5e-41   8.4e-38  129.9   1.6     1   166     9   175     9   176 0.96 short chain dehydrogenase
adh_short_C2         PF13561.1    241 sp|P39071|DHBA_BACSU -            261   2.5e-32  112.5   0.7   1   1   1.6e-35     3e-32  112.3   0.7     1   241    15   258    15   258 0.92 Enoyl-(Acyl carrier protein) reductase
KR                   PF08659.5    181 sp|P39071|DHBA_BACSU -            261   6.1e-17   61.8   0.3   1   1   4.8e-20   8.9e-17   61.3   0.3     4   155    12   163    10   201 0.90 KR domain
NAD_binding_10       PF13460.1    183 sp|P39071|DHBA_BACSU -            261   6.1e-05   23.1   0.6   1   1   7.1e-08   0.00013   22.0   0.6     3   145    13   189    12   239 0.79 NADH(P)-binding
Methyltransf_25      PF13649.1    101 sp|P39071|DHBA_BACSU -            261   0.00017   21.8   0.0   1   1   1.7e-07   0.00032   21.0   0.0     9    90    17   113    14   116 0.74 Methyltransferase domain
Epimerase            PF01370.16   236 sp|P39071|DHBA_BACSU -            261    0.0024   17.3   0.1   1   1   3.1e-06    0.0058   16.1   0.1     2   108    12   132    11   249 0.69 NAD dependent epimerase/dehydratase family
TrkA_N               PF02254.13   116 sp|P39071|DHBA_BACSU -            261     0.011   15.7   0.1   1   1   1.1e-05     0.021   14.8   0.1     9    58    20    75    12    79 0.72 TrkA-N domain
3HCDH_N              PF02737.13   180 sp|P39071|DHBA_BACSU -            261      0.06   12.9   0.1   1   1   5.5e-05       0.1   12.2   0.1    10    65    20    77    12    90 0.74 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain
Isochorismatase      PF00857.15   174 sp|P45743|DHBB_BACSU -            312   2.6e-38  131.6   0.1   1   3   2.3e-41   1.7e-37  129.0   0.0     2   172    32   203    31   205 0.97 Isochorismatase family
PP-binding           PF00550.20    67 sp|P45743|DHBB_BACSU -            312   7.3e-10   38.9   0.2   1   1   2.1e-13   1.6e-09   37.8   0.2     3    62   235   293   233   298 0.94 Phosphopantetheine attachment site
Chorismate_bind      PF00425.13   257 sp|P45744|DHBC_BACSU -            398   2.5e-78  262.9   0.0   1   1   2.1e-82   3.2e-78  262.6   0.0     2   257   124   385   123   385 0.97 chorismate binding enzyme
AMP-binding          PF00501.23   417 sp|P40871|DHBE_BACSU -            539   9.8e-85  284.4   0.0   1   2   6.5e-88   2.4e-84  283.1   0.0     2   416    32   435    31   436 0.83 AMP-binding enzyme
AMP-binding_C        PF13193.1     73 sp|P40871|DHBE_BACSU -            539     7e-17   62.1   0.1   1   1   8.9e-20   3.3e-16   59.9   0.1     1    73   444   519   444   519 0.95 AMP-binding enzyme C-terminal domain
SAP                  PF02037.22    35 sp|P40871|DHBE_BACSU -            539     0.082   12.4   0.1   1   1   4.2e-05      0.16   11.5   0.1     5    19   484   498   484   499 0.91 SAP domain
AMP-binding          PF00501.23   417 sp|P45745|DHBF_BACSU -           2378  3.4e-234  776.7   0.0   1   2  7.3e-120  1.2e-116  389.5   0.0     1   417   464   861   464   861 0.88 AMP-binding enzyme
AMP-binding          PF00501.23   417 sp|P45745|DHBF_BACSU -           2378  3.4e-234  776.7   0.0   2   2  1.5e-118  2.5e-115  385.1   0.0     1   417  1520  1935  1520  1935 0.85 AMP-binding enzyme
Condensation         PF00668.15   301 sp|P45745|DHBF_BACSU -           2378  2.6e-119  397.5   0.0   1   2   1.4e-51   2.3e-48  164.5   0.0     4   300     8   301     5   302 0.94 Condensation domain
Condensation         PF00668.15   301 sp|P45745|DHBF_BACSU -           2378  2.6e-119  397.5   0.0   2   2   7.8e-72   1.3e-68  231.0   0.0     3   300  1049  1349  1047  1350 0.93 Condensation domain
AMP-binding_C        PF13193.1     73 sp|P45745|DHBF_BACSU -           2378   7.6e-39  132.5   2.1   1   2   2.2e-20   3.6e-17   63.0   0.1     1    73   869   942   869   942 0.94 AMP-binding enzyme C-terminal domain
AMP-binding_C        PF13193.1     73 sp|P45745|DHBF_BACSU -           2378   7.6e-39  132.5   2.1   2   2   6.3e-22     1e-18   68.0   0.2     1    73  1943  2017  1943  2017 0.93 AMP-binding enzyme C-terminal domain
Thioesterase         PF00975.15   229 sp|P45745|DHBF_BACSU -           2378   1.2e-36  127.0   0.0   2   2   7.5e-39   1.2e-35  123.7   0.0     1   215  2129  2358  2129  2369 0.79 Thioesterase domain
PP-binding           PF00550.20    67 sp|P45745|DHBF_BACSU -           2378   9.8e-30  102.6   1.8   1   2   1.6e-16   2.7e-13   49.9   0.1     2    67   969  1032   968  1032 0.95 Phosphopantetheine attachment site
PP-binding           PF00550.20    67 sp|P45745|DHBF_BACSU -           2378   9.8e-30  102.6   1.8   2   2   7.7e-17   1.3e-13   51.0   0.1     3    67  2045  2107  2043  2107 0.94 Phosphopantetheine attachment site
HxxPF_rpt            PF13745.1     91 sp|P45745|DHBF_BACSU -           2378   8.8e-29   99.6   0.1   2   2   1.8e-30   2.9e-27   94.8   0.1     1    90  1371  1466  1371  1467 0.95 HxxPF-repeated domain
Abhydrolase_6        PF12697.2    228 sp|P45745|DHBF_BACSU -           2378     3e-14   53.4   0.9   2   2   6.8e-16   1.1e-12   48.3   0.0     1   103  2131  2233  2131  2342 0.81 Alpha/beta hydrolase family
Abhydrolase_5        PF12695.2    145 sp|P45745|DHBF_BACSU -           2378   0.00078   19.2   0.0   1   1   1.1e-06    0.0018   18.0   0.0     4    96  2133  2232  2130  2277 0.71 Alpha/beta hydrolase family
HicB                 PF05534.7     51 sp|P45745|DHBF_BACSU -           2378    0.0073   15.8   0.0   1   1   1.1e-05     0.018   14.5   0.0    19    43  1273  1297  1264  1297 0.93 HicB family
ELFV_dehydrog        PF00208.16   244 sp|P39633|DHE2_BACSU -            424     3e-73  246.3   0.9   1   1   1.2e-76   4.6e-73  245.7   0.9     1   244   191   422   191   422 0.97 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase
ELFV_dehydrog_N      PF02812.13   131 sp|P39633|DHE2_BACSU -            424   2.7e-54  182.2   0.0   2   2   3.4e-57   1.3e-53  180.1   0.0     1   130    45   174    45   175 0.99 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain
2-Hacid_dh_C         PF02826.14   178 sp|P39633|DHE2_BACSU -            424     0.028   13.5   0.2   1   1   1.6e-05     0.058   12.5   0.2    27    67   212   252   194   264 0.87 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain
Malic_M              PF03949.10   255 sp|P39633|DHE2_BACSU -            424     0.044   13.3   0.3   1   1   1.9e-05     0.069   12.6   0.3    10   126   206   314   198   344 0.73 Malic enzyme, NAD binding domain
adh_short            PF00106.20   167 sp|P80869|DHG2_BACSU -            258   2.7e-32  111.9   0.1   1   1   2.2e-35   5.4e-32  111.0   0.1     1   165     8   176     8   178 0.95 short chain dehydrogenase
adh_short_C2         PF13561.1    241 sp|P80869|DHG2_BACSU -            258   3.7e-30  105.4   1.2   1   1   1.7e-33   4.3e-30  105.2   1.2     5   241    16   251    13   251 0.89 Enoyl-(Acyl carrier protein) reductase
KR                   PF08659.5    181 sp|P80869|DHG2_BACSU -            258     1e-09   38.3   0.1   1   1   5.9e-13   1.5e-09   37.8   0.1     2   150     9   160     8   195 0.76 KR domain
Eno-Rase_NADH_b      PF12242.3     78 sp|P80869|DHG2_BACSU -            258    0.0076   16.0   0.0   1   1   8.2e-06      0.02   14.6   0.0    38    75     7    41     2    44 0.85 NAD(P)H binding domain of trans-2-enoyl-CoA reductase
THF_DHG_CYH_C        PF02882.14   161 sp|P80869|DHG2_BACSU -            258     0.046   12.8   0.4   1   2   5.4e-05      0.13   11.2   0.1    33    69     4    41     1    73 0.70 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain
Epimerase            PF01370.16   236 sp|P80869|DHG2_BACSU -            258      0.14   11.5   0.8   1   2   0.00017      0.42   10.0   0.5     2   117    11   147    10   206 0.73 NAD dependent epimerase/dehydratase family
adh_short            PF00106.20   167 sp|P12310|DHG_BACSU  -            261   8.6e-34  116.8   0.0   1   1   6.4e-37   1.6e-33  116.0   0.0     1   166     8   176     8   177 0.96 short chain dehydrogenase
adh_short_C2         PF13561.1    241 sp|P12310|DHG_BACSU  -            261   6.1e-24   85.1   0.1   1   1   2.9e-27   7.2e-24   84.8   0.1     1   241    14   251    14   251 0.90 Enoyl-(Acyl carrier protein) reductase
KR                   PF08659.5    181 sp|P12310|DHG_BACSU  -            261   8.1e-10   38.6   0.0   1   1   5.7e-13   1.4e-09   37.8   0.0     3   116    10   120     9   165 0.86 KR domain
Epimerase            PF01370.16   236 sp|P12310|DHG_BACSU  -            261    0.0055   16.1   0.3   1   1     5e-06     0.012   15.0   0.2     2    77    11    97    10   202 0.77 NAD dependent epimerase/dehydratase family
THF_DHG_CYH_C        PF02882.14   161 sp|P12310|DHG_BACSU  -            261    0.0083   15.2   0.4   1   1   5.6e-06     0.014   14.5   0.4    33   103     4    72     1    93 0.88 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain
Polysacc_synt_2      PF02719.10   294 sp|P12310|DHG_BACSU  -            261    0.0096   14.8   0.3   1   1   4.9e-06     0.012   14.5   0.3     1   122    10   134    10   174 0.79 Polysaccharide biosynthesis protein
ELFV_dehydrog        PF00208.16   244 sp|P54531|DHLE_BACSU -            364   1.4e-44  152.4   1.7   1   1   1.6e-46   1.7e-43  148.9   1.7     1   243   141   350   141   351 0.92 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase
ELFV_dehydrog_N      PF02812.13   131 sp|P54531|DHLE_BACSU -            364   7.5e-40  135.5   0.1   1   1   1.4e-42   1.5e-39  134.5   0.1     2   131    13   134    12   134 0.97 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain
2-Hacid_dh_C         PF02826.14   178 sp|P54531|DHLE_BACSU -            364     2e-06   27.0   0.0   2   2   1.2e-08   1.3e-05   24.4   0.0    25    94   162   233   151   264 0.79 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain
AdoHcyase_NAD        PF00670.16   162 sp|P54531|DHLE_BACSU -            364   0.00052   19.8   0.3   1   1   8.5e-07   0.00091   19.1   0.3    17   107   168   258   151   271 0.77 S-adenosyl-L-homocysteine hydrolase, NAD binding domain
NAD_binding_2        PF03446.10   163 sp|P54531|DHLE_BACSU -            364   0.00079   19.2   0.0   1   1   1.3e-06    0.0013   18.5   0.0     2    64   174   237   173   273 0.76 NAD binding domain of 6-phosphogluconate dehydrogenase
UPF0146              PF03686.8    127 sp|P54531|DHLE_BACSU -            364    0.0024   17.7   0.1   1   1   6.4e-06    0.0068   16.2   0.1    15    70   173   236   161   254 0.76 Uncharacterised protein family (UPF0146)
NAD_binding_7        PF13241.1    103 sp|P54531|DHLE_BACSU -            364     0.003   17.7   0.1   1   1   6.9e-06    0.0073   16.5   0.1     5    60   171   233   170   281 0.60 Putative NAD(P)-binding
TrkA_N               PF02254.13   116 sp|P54531|DHLE_BACSU -            364    0.0035   17.3   0.0   1   1   1.3e-05     0.013   15.4   0.0     1    45   176   221   176   231 0.86 TrkA-N domain
F420_oxidored        PF03807.12    96 sp|P54531|DHLE_BACSU -            364    0.0059   16.9   0.0   2   2   0.00084      0.89   10.0   0.0     1    52   175   222   175   235 0.83 NADP oxidoreductase coenzyme F420-dependent
adh_short_C2         PF13561.1    241 sp|P54531|DHLE_BACSU -            364     0.021   14.6   0.0   1   1   3.4e-05     0.036   13.8   0.0     8    52   184   230   180   276 0.70 Enoyl-(Acyl carrier protein) reductase
Shikimate_DH         PF01488.15   135 sp|P54531|DHLE_BACSU -            364     0.032   14.3   0.0   2   2   0.00029      0.31   11.1   0.0     6    64   165   221   160   261 0.81 Shikimate / quinate 5-dehydrogenase
IlvN                 PF07991.7    165 sp|P54531|DHLE_BACSU -            364      0.04   13.2   0.2   1   1     8e-05     0.084   12.2   0.2     2    58   171   227   170   314 0.78 Acetohydroxy acid isomeroreductase, catalytic domain
Pyr_redox_3          PF13738.1    203 sp|P54531|DHLE_BACSU -            364     0.049   13.6   0.0   1   1   0.00012      0.13   12.2   0.0   155   195   161   201   126   209 0.78 Pyridine nucleotide-disulphide oxidoreductase
UDPG_MGDP_dh_N       PF03721.9    185 sp|P54531|DHLE_BACSU -            364     0.092   12.1   0.0   1   2   0.00051      0.54    9.6   0.0     2    38   175   211   174   216 0.93 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain
Pyr_redox_2          PF07992.9    201 sp|P42974|DHNA_BACSU -            509   5.7e-30  104.7   0.0   1   1   1.7e-32   1.1e-29  103.7   0.0     1   198   210   482   210   485 0.89 Pyridine nucleotide-disulphide oxidoreductase
Pyr_redox            PF00070.22    80 sp|P42974|DHNA_BACSU -            509   3.3e-14   53.0   8.3   2   2   4.5e-15     3e-12   46.7   0.3     2    75   350   418   349   424 0.93 Pyridine nucleotide-disulphide oxidoreductase
Pyr_redox_3          PF13738.1    203 sp|P42974|DHNA_BACSU -            509   2.3e-13   50.6   0.6   2   2   2.2e-13   1.5e-10   41.5   0.0    74   195   255   375   245   380 0.77 Pyridine nucleotide-disulphide oxidoreductase
FAD_binding_2        PF00890.19   417 sp|P42974|DHNA_BACSU -            509   7.7e-09   34.8  16.5   2   5     3e-06     0.002   17.0   3.3     1    30   210   239   210   246 0.92 FAD binding domain
FAD_binding_2        PF00890.19   417 sp|P42974|DHNA_BACSU -            509   7.7e-09   34.8  16.5   4   5    0.0015      0.99    8.1   2.4     1    33   349   381   349   450 0.83 FAD binding domain
FAD_binding_2        PF00890.19   417 sp|P42974|DHNA_BACSU -            509   7.7e-09   34.8  16.5   5   5   0.00045      0.31    9.8   0.1   378   407   455   486   403   495 0.70 FAD binding domain
Thioredoxin_3        PF13192.1     76 sp|P42974|DHNA_BACSU -            509   8.4e-09   35.1   0.2   1   2   6.2e-10   4.2e-07   29.6   0.0     6    73   124   193   119   195 0.83 Thioredoxin domain
GIDA                 PF01134.17   392 sp|P42974|DHNA_BACSU -            509   1.3e-07   30.8  16.0   1   4   2.9e-07    0.0002   20.3   1.8     1    31   210   240   210   262 0.83 Glucose inhibited division protein A
GIDA                 PF01134.17   392 sp|P42974|DHNA_BACSU -            509   1.3e-07   30.8  16.0   3   4   0.00013     0.088   11.6   2.4     1    27   349   375   349   389 0.82 Glucose inhibited division protein A
FAD_oxidored         PF12831.2    428 sp|P42974|DHNA_BACSU -            509   6.5e-07   28.7   7.5   1   3   1.4e-08   9.7e-06   24.9   0.0     1    31   210   240   210   301 0.93 FAD dependent oxidoreductase
DAO                  PF01266.19   358 sp|P42974|DHNA_BACSU -            509   3.1e-06   26.3   7.1   1   3   1.8e-06    0.0012   17.8   0.9     1    31   210   240   210   253 0.92 FAD dependent oxidoreductase
DAO                  PF01266.19   358 sp|P42974|DHNA_BACSU -            509   3.1e-06   26.3   7.1   3   3    0.0012       0.8    8.5   0.3     1    29   349   377   349   383 0.93 FAD dependent oxidoreductase
Thi4                 PF01946.12   230 sp|P42974|DHNA_BACSU -            509   4.6e-06   25.8   3.7   1   3     3e-06     0.002   17.2   0.1    14    49   205   240   196   261 0.83 Thi4 family
HI0933_like          PF03486.9    409 sp|P42974|DHNA_BACSU -            509   1.7e-05   23.4  10.3   1   3   0.00012     0.082   11.3   1.1     1    28   209   236   209   243 0.88 HI0933-like protein
HI0933_like          PF03486.9    409 sp|P42974|DHNA_BACSU -            509   1.7e-05   23.4  10.3   3   3   4.6e-05     0.031   12.7   0.2     2    34   349   381   348   388 0.92 HI0933-like protein
NAD_binding_7        PF13241.1    103 sp|P42974|DHNA_BACSU -            509   7.7e-05   22.8   0.6   1   2   0.00053      0.35   11.1   0.0     6    48   207   256   203   321 0.71 Putative NAD(P)-binding
NAD_binding_7        PF13241.1    103 sp|P42974|DHNA_BACSU -            509   7.7e-05   22.8   0.6   2   2    0.0013      0.91    9.8   0.1     5    45   345   396   344   463 0.70 Putative NAD(P)-binding
Glutaredoxin         PF00462.19    60 sp|P42974|DHNA_BACSU -            509   0.00026   20.9   0.3   1   1   7.1e-06    0.0048   16.8   0.0     4    59   123   179   120   180 0.82 Glutaredoxin
K_oxygenase          PF13434.1    341 sp|P42974|DHNA_BACSU -            509   0.00042   19.3   0.2   2   2   5.5e-06    0.0037   16.2   0.0   107   215   268   372   264   386 0.73 L-lysine 6-monooxygenase (NADPH-requiring)
FAD_binding_3        PF01494.14   356 sp|P42974|DHNA_BACSU -            509   0.00051   19.2   0.4   1   3   7.5e-07   0.00051   19.2   0.4     3    31   210   238   208   247 0.90 FAD binding domain
Thioredoxin_4        PF13462.1    163 sp|P42974|DHNA_BACSU -            509   0.00066   19.7   0.9   3   3   0.00047      0.32   10.9   0.0   124   157   156   190   136   193 0.81 Thioredoxin
NAD_binding_8        PF13450.1     68 sp|P42974|DHNA_BACSU -            509    0.0028   17.6   3.6   1   2   8.5e-05     0.057   13.4   0.6     1    35   213   245   213   257 0.87 NAD(P)-binding Rossmann-like domain
Lycopene_cycl        PF05834.7    374 sp|P42974|DHNA_BACSU -            509     0.051   12.4   5.6   1   3   0.00078      0.53    9.1   0.3     1    30   210   237   210   244 0.87 Lycopene cyclase protein
Homoserine_dh        PF00742.14   179 sp|P19582|DHOM_BACSU -            433     5e-67  225.0   0.0   1   1   1.1e-69   1.8e-66  223.2   0.0     1   179   137   315   137   315 1.00 Homoserine dehydrogenase
NAD_binding_3        PF03447.11   117 sp|P19582|DHOM_BACSU -            433   5.9e-29  100.8   0.3   1   1     1e-31   1.7e-28   99.3   0.4     1   117    10   129    10   129 0.99 Homoserine dehydrogenase, NAD binding domain
ACT                  PF01842.20    66 sp|P19582|DHOM_BACSU -            433   2.7e-11   42.6   0.2   1   1   1.7e-14   2.7e-11   42.6   0.2     3    65   351   416   350   417 0.98 ACT domain
GFO_IDH_MocA         PF01408.17   120 sp|P19582|DHOM_BACSU -            433     0.012   16.0   0.1   1   1   3.3e-05     0.055   13.9   0.1     1    90     4   101     4   103 0.79 Oxidoreductase family, NAD-binding Rossmann fold
ACT_4                PF13291.1     80 sp|P19582|DHOM_BACSU -            433      0.02   15.2   0.2   1   1     4e-05     0.065   13.5   0.2     9    79   351   422   349   422 0.92 ACT domain
DXP_reductoisom      PF02670.11   129 sp|P19582|DHOM_BACSU -            433     0.051   14.1   0.1   1   1   0.00013      0.22   12.0   0.1    46   127    37   110    16   112 0.69 1-deoxy-D-xylulose 5-phosphate reductoisomerase
Saccharop_dh         PF03435.13   386 sp|P19582|DHOM_BACSU -            433     0.083   11.8   0.8   1   1     8e-05      0.13   11.1   0.8     1   115     6   123     6   136 0.70 Saccharopine dehydrogenase
Pterin_bind          PF00809.17   210 sp|P28822|DHPS_BACSU -            285   3.7e-75  251.8   0.1   1   1   3.3e-79   4.9e-75  251.4   0.1     1   210    30   229    30   229 0.99 Pterin binding enzyme
Sdh_cyt              PF01127.17   121 sp|P08064|DHSC_BACSU -            202   3.3e-15   55.9  21.6   1   2   3.4e-06     0.026   14.3   3.4    28    91    15    79     7    92 0.73 Succinate dehydrogenase/Fumarate reductase transmembrane subunit
Sdh_cyt              PF01127.17   121 sp|P08064|DHSC_BACSU -            202   3.3e-15   55.9  21.6   2   2   9.4e-17     7e-13   48.4   9.8    18   118    91   191    80   194 0.86 Succinate dehydrogenase/Fumarate reductase transmembrane subunit
DUF1691              PF07950.6    110 sp|P08064|DHSC_BACSU -            202   0.00062   19.6   7.0   2   2   4.7e-06     0.035   14.0   2.4     2    93   108   193   107   201 0.72 Protein of unknown function (DUF1691)
ADH_zinc_N           PF00107.21   130 sp|Q06004|DHSO_BACSU -            353   3.2e-36  123.7   0.0   1   1   3.8e-39     7e-36  122.6   0.0     1   129   183   311   183   312 0.99 Zinc-binding dehydrogenase
ADH_N                PF08240.7    109 sp|Q06004|DHSO_BACSU -            353   2.9e-35  120.3   0.8   1   1   2.7e-38   5.1e-35  119.5   0.8     2   107    33   141    32   143 0.97 Alcohol dehydrogenase GroES-like domain
ADH_zinc_N_2         PF13602.1    127 sp|Q06004|DHSO_BACSU -            353    0.0001   23.1   0.0   1   1   1.5e-07   0.00028   21.7   0.0     1   115   216   336   216   339 0.68 Zinc-binding dehydrogenase
2-Hacid_dh_C         PF02826.14   178 sp|Q06004|DHSO_BACSU -            353    0.0046   16.1   0.1   1   1   4.7e-06    0.0088   15.2   0.1    35    80   172   218   161   232 0.82 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain
AlaDh_PNT_C          PF01262.16   168 sp|Q06004|DHSO_BACSU -            353    0.0095   15.5   0.1   1   1     1e-05     0.019   14.5   0.1    19    69   171   223   161   248 0.83 Alanine dehydrogenase/PNT, C-terminal domain
AdoHcyase_NAD        PF00670.16   162 sp|Q06004|DHSO_BACSU -            353     0.027   14.3   0.5   2   2     5e-05     0.092   12.5   0.1    20    61   170   212   156   244 0.77 S-adenosyl-L-homocysteine hydrolase, NAD binding domain
DinB                 PF05163.7    169 sp|Q02886|DINB_BACSU -            172   4.1e-51  173.0   0.3   1   1   6.1e-55   4.5e-51  172.9   0.3     1   165     1   169     1   172 0.98 DinB family
DinB_2               PF12867.2    127 sp|Q02886|DINB_BACSU -            172   8.1e-07   29.4   0.1   1   1   1.4e-10     1e-06   29.0   0.1     5   125    15   142    12   144 0.84 DinB superfamily
Helicase_C_2         PF13307.1    167 sp|P54394|DING_BACSU -            931   4.3e-41  140.6   0.0   1   1   6.9e-44   1.3e-40  139.1   0.0     5   166   750   911   746   912 0.96 Helicase C-terminal domain
RNase_T              PF00929.19   164 sp|P54394|DING_BACSU -            931   1.6e-36  126.0   0.2   1   2     6e-39   1.1e-35  123.3   0.0     1   162     7   161     7   163 0.97 Exonuclease
DEAD                 PF00270.24   169 sp|P54394|DING_BACSU -            931   1.5e-07   31.0   1.9   1   3   1.5e-06    0.0028   17.1   0.0     7    61   270   322   261   383 0.85 DEAD/DEAH box helicase
ResIII               PF04851.10   184 sp|P54394|DING_BACSU -            931   1.1e-05   25.3   4.4   1   3   1.7e-08   3.1e-05   23.8   0.4     3   163   258   472   256   512 0.72 Type III restriction enzyme, res subunit
RNase_H_2            PF13482.1    164 sp|P54394|DING_BACSU -            931    0.0019   18.0   0.1   1   1     6e-06     0.011   15.5   0.1     2   118     8   148     7   159 0.72 RNase_H superfamily
T4SS-DNA_transf      PF02534.9    469 sp|P54394|DING_BACSU -            931     0.023   13.3   0.0   1   1   2.7e-05     0.051   12.1   0.0    44    72   264   305   226   311 0.76 Type IV secretory system Conjugative DNA transfer
DEAD_2               PF06733.10   174 sp|P54394|DING_BACSU -            931     0.033   13.5   0.0   2   2   0.00016      0.29   10.5   0.0   104   164   416   474   400   483 0.79 DEAD_2
DisA-linker          PF10635.4    145 sp|P37573|DISA_BACSU -            360   7.7e-54  181.1   5.0   1   1   8.2e-57   1.5e-53  180.1   5.0     1   143   146   287   146   289 0.97 DisA bacterial checkpoint controller linker region
DisA_N               PF02457.11   122 sp|P37573|DISA_BACSU -            360   8.4e-34  115.3   0.1   1   1   8.3e-37   1.5e-33  114.4   0.1     1   121    27   143    27   144 0.97 DisA bacterial checkpoint controller nucleotide-binding
HHH_2                PF12826.2     64 sp|P37573|DISA_BACSU -            360   1.9e-06   27.6   0.4   2   2   1.1e-08   2.1e-05   24.2   0.1    19    53   311   345   308   356 0.89 Helix-hairpin-helix motif
HHH                  PF00633.18    30 sp|P37573|DISA_BACSU -            360   2.8e-05   23.5   0.4   1   1   4.3e-08   7.9e-05   22.1   0.4     5    28   321   344   320   345 0.94 Helix-hairpin-helix motif
HHH_5                PF14520.1     60 sp|P37573|DISA_BACSU -            360   9.3e-05   22.5   0.1   1   1   1.4e-07   0.00027   21.0   0.1     7    58   297   347   294   349 0.84 Helix-hairpin-helix domain
HHH_3                PF12836.2     65 sp|P37573|DISA_BACSU -            360     0.022   14.7   0.1   1   1   7.6e-05      0.14   12.1   0.0    11    30   324   343   321   346 0.93 Helix-hairpin-helix motif
DUF2670              PF10875.3    139 sp|P37573|DISA_BACSU -            360     0.024   14.6   0.1   1   1   2.5e-05     0.047   13.7   0.1    33    97   133   200   119   218 0.81 Protein of unknown function (DUF2670)
Cullin_Nedd8         PF10557.4     68 sp|P37573|DISA_BACSU -            360     0.041   13.7   0.1   1   1   5.4e-05       0.1   12.4   0.1    38    63   334   359   323   360 0.87 Cullin protein neddylation domain
DivIVA               PF05103.8    131 sp|P71021|DIV4A_BACSU -            164   1.8e-46  157.4  12.7   1   1   1.4e-49   2.1e-46  157.2  12.7     1   131     3   133     3   133 0.99 DivIVA protein
DUF1664              PF07889.7    126 sp|P71021|DIV4A_BACSU -            164    0.0074   16.0   2.8   1   2     5e-06    0.0074   16.0   2.8    43   111    23    91    18   103 0.86 Protein of unknown function (DUF1664)
DUF2087              PF09860.4     71 sp|P71021|DIV4A_BACSU -            164    0.0077   15.9   0.1   1   1   1.3e-05     0.019   14.7   0.1    27    51    17    41    10    45 0.87 Uncharacterized protein conserved in bacteria (DUF2087)
Orbi_NS1             PF01718.11   546 sp|P71021|DIV4A_BACSU -            164    0.0086   14.1   0.7   1   1   6.9e-06      0.01   13.8   0.7   210   307    53   151    14   152 0.87 Orbivirus non-structural protein NS1, or hydrophobic tubular protein
DUF948               PF06103.6     90 sp|P71021|DIV4A_BACSU -            164      0.09   12.6   2.6   1   2   0.00014      0.21   11.4   0.4    29    64    23    58    12    87 0.85 Bacterial protein of unknown function (DUF948)
ATP-synt_B           PF00430.13   132 sp|P71021|DIV4A_BACSU -            164      0.15   11.8  13.1   1   1   0.00012      0.18   11.5  12.2    43   101    64   123    43   131 0.77 ATP synthase B/B' CF(0)
POTRA_1              PF08478.5     69 sp|P16655|DIVIB_BACSU -            263   1.7e-20   72.7   2.6   1   1   1.7e-23   4.1e-20   71.5   2.2     1    69    54   123    54   123 0.99 POTRA domain, FtsQ-type
FtsQ                 PF03799.10   117 sp|P16655|DIVIB_BACSU -            263   1.2e-14   54.5   0.0   1   1   9.6e-18   2.4e-14   53.5   0.0     1   108   126   235   126   242 0.91 Cell division protein FtsQ
ExbD                 PF02472.11   130 sp|P16655|DIVIB_BACSU -            263     0.025   14.5   3.3   1   2   1.3e-05     0.032   14.2   1.3    16   119    33   142    33   144 0.79 Biopolymer transport protein ExbD/TolR
ABC2_membrane_3      PF12698.2    344 sp|P16655|DIVIB_BACSU -            263     0.026   13.5   5.4   1   1   1.4e-05     0.034   13.2   5.4     6   147    34   198    30   237 0.60 ABC-2 family transporter protein
Orbi_NS3             PF01616.11   195 sp|P16655|DIVIB_BACSU -            263     0.049   12.5   1.3   1   1   3.4e-05     0.084   11.8   1.3    77   168    18   110     9   113 0.68 Orbivirus NS3
DUF2116              PF09889.4     59 sp|P16655|DIVIB_BACSU -            263      0.22   11.3   1.2   1   1   0.00026      0.63    9.8   1.2    30    55    22    47    18    52 0.56 Uncharacterized protein containing a Zn-ribbon (DUF2116)
Pyr_redox_2          PF07992.9    201 sp|P21880|DLDH1_BACSU -            470   1.5e-43  149.0   8.9   1   1     2e-46   1.5e-43  149.0   8.9     2   200    12   320    11   321 0.94 Pyridine nucleotide-disulphide oxidoreductase
Pyr_redox_dim        PF02852.17   110 sp|P21880|DLDH1_BACSU -            470   9.6e-38  128.5   0.4   1   1   3.4e-40   2.5e-37  127.2   0.4     1   109   349   457   349   458 0.98 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain
Pyr_redox            PF00070.22    80 sp|P21880|DLDH1_BACSU -            470   6.4e-23   80.9   5.5   1   2   6.6e-05     0.049   14.0   0.3     3    30    13    40    11    43 0.93 Pyridine nucleotide-disulphide oxidoreductase
Pyr_redox            PF00070.22    80 sp|P21880|DLDH1_BACSU -            470   6.4e-23   80.9   5.5   2   2   6.8e-22     5e-19   68.4   0.9     1    78   178   256   178   262 0.94 Pyridine nucleotide-disulphide oxidoreductase
GIDA                 PF01134.17   392 sp|P21880|DLDH1_BACSU -            470   1.5e-10   40.4   0.9   1   3   2.1e-13   1.5e-10   40.4   0.9     2   150    12   149    11   174 0.86 Glucose inhibited division protein A
FAD_oxidored         PF12831.2    428 sp|P21880|DLDH1_BACSU -            470   4.4e-08   32.6   4.2   1   2   5.7e-09   4.3e-06   26.0   3.5     1    37    11    46    11    62 0.90 FAD dependent oxidoreductase
FAD_binding_2        PF00890.19   417 sp|P21880|DLDH1_BACSU -            470   2.1e-07   30.1  11.3   1   3   3.9e-09   2.9e-06   26.3   2.7     1    32    11    42    11    50 0.93 FAD binding domain
Pyr_redox_3          PF13738.1    203 sp|P21880|DLDH1_BACSU -            470   4.1e-07   30.2   3.4   1   2   1.6e-07   0.00012   22.2   0.7     1   177    13   186    13   194 0.72 Pyridine nucleotide-disulphide oxidoreductase
HI0933_like          PF03486.9    409 sp|P21880|DLDH1_BACSU -            470     1e-05   24.1   7.6   1   2   5.9e-08   4.4e-05   22.1   0.7     2    33    11    42    10    49 0.93 HI0933-like protein
NAD_binding_9        PF13454.1    156 sp|P21880|DLDH1_BACSU -            470   6.9e-05   22.6   2.4   3   3   0.00024      0.18   11.5   0.1   105   155   220   275   215   276 0.74 FAD-NAD(P)-binding
DAO                  PF01266.19   358 sp|P21880|DLDH1_BACSU -            470   0.00013   20.9  13.6   1   3     4e-06     0.003   16.5   1.4     1    35    11    45    11    64 0.94 FAD dependent oxidoreductase
DAO                  PF01266.19   358 sp|P21880|DLDH1_BACSU -            470   0.00013   20.9  13.6   3   3    0.0012      0.91    8.3   0.1   153   200   223   274   218   306 0.81 FAD dependent oxidoreductase
NAD_binding_8        PF13450.1     68 sp|P21880|DLDH1_BACSU -            470   0.00015   21.7   0.5   1   2     2e-07   0.00015   21.7   0.5     1    36    14    48    14    71 0.88 NAD(P)-binding Rossmann-like domain
DUF4150              PF13665.1    110 sp|P21880|DLDH1_BACSU -            470    0.0021   17.9   0.2   1   1   5.5e-06    0.0041   16.9   0.2    24    88    65   131    46   141 0.89 Domain of unknown function (DUF4150)
FAD_binding_3        PF01494.14   356 sp|P21880|DLDH1_BACSU -            470    0.0022   17.1  12.4   1   2   1.4e-05      0.01   14.9   0.3     1    33     9    41     9    43 0.95 FAD binding domain
FAD_binding_3        PF01494.14   356 sp|P21880|DLDH1_BACSU -            470    0.0022   17.1  12.4   2   2   0.00044      0.33    9.9   0.1   118   171   224   276   216   313 0.79 FAD binding domain
3HCDH_N              PF02737.13   180 sp|P21880|DLDH1_BACSU -            470    0.0029   17.3   2.1   2   2   8.2e-05     0.061   12.9   0.1     2    57   179   241   178   273 0.76 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain
Thi4                 PF01946.12   230 sp|P21880|DLDH1_BACSU -            470    0.0057   15.7   0.5   1   1   7.7e-06    0.0057   15.7   0.5    16    68     8    59     5   119 0.75 Thi4 family
UDPG_MGDP_dh_N       PF03721.9    185 sp|P21880|DLDH1_BACSU -            470     0.011   15.1   7.9   2   2   0.00011     0.079   12.3   2.6     2    85   178   274   177   288 0.59 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain
Trp_halogenase       PF04820.9    454 sp|P21880|DLDH1_BACSU -            470      0.06   11.9   0.9   1   1   0.00014      0.11   11.1   0.9     3    47    13    54    11    63 0.83 Tryptophan halogenase
Pyr_redox_2          PF07992.9    201 sp|P54533|DLDH2_BACSU -            474   1.4e-42  145.8   0.0   1   1   5.4e-45   3.5e-42  144.5   0.0     1   199     6   324     6   326 0.93 Pyridine nucleotide-disulphide oxidoreductase
Pyr_redox_dim        PF02852.17   110 sp|P54533|DLDH2_BACSU -            474   7.1e-38  129.0   1.0   1   1   1.7e-40   1.1e-37  128.4   0.0     1   110   355   464   355   464 0.99 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain
Pyr_redox            PF00070.22    80 sp|P54533|DLDH2_BACSU -            474   3.5e-23   81.7   5.5   2   2   1.5e-23   9.5e-21   74.0   0.1     1    64   183   246   183   265 0.94 Pyridine nucleotide-disulphide oxidoreductase
GIDA                 PF01134.17   392 sp|P54533|DLDH2_BACSU -            474     8e-10   38.1   7.0   1   3   3.9e-11   2.5e-08   33.2   0.3     1   150     6   153     6   174 0.66 Glucose inhibited division protein A
FAD_binding_2        PF00890.19   417 sp|P54533|DLDH2_BACSU -            474   2.5e-08   33.2   5.6   1   2   1.1e-10   7.1e-08   31.7   0.7     1    35     6    39     6   104 0.93 FAD binding domain
FAD_oxidored         PF12831.2    428 sp|P54533|DLDH2_BACSU -            474   4.3e-08   32.6   0.8   1   1   6.7e-11   4.3e-08   32.6   0.8     1    37     6    41     6    91 0.90 FAD dependent oxidoreductase
DAO                  PF01266.19   358 sp|P54533|DLDH2_BACSU -            474   4.1e-07   29.2   7.4   1   3   2.6e-07   0.00017   20.6   0.3     1    35     6    40     6   106 0.85 FAD dependent oxidoreductase
DAO                  PF01266.19   358 sp|P54533|DLDH2_BACSU -            474   4.1e-07   29.2   7.4   2   3   0.00029      0.19   10.6   1.4     2    30   184   212   183   216 0.93 FAD dependent oxidoreductase
Pyr_redox_3          PF13738.1    203 sp|P54533|DLDH2_BACSU -            474   5.7e-07   29.7   0.2   1   2   1.2e-08     8e-06   26.0   0.1     1   197     8   211     8   217 0.69 Pyridine nucleotide-disulphide oxidoreductase
3HCDH_N              PF02737.13   180 sp|P54533|DLDH2_BACSU -            474   7.6e-07   28.9   1.2   2   2   9.2e-08   5.9e-05   22.7   0.0     2    59   184   241   183   271 0.83 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain
Thi4                 PF01946.12   230 sp|P54533|DLDH2_BACSU -            474     1e-06   28.0   0.9   1   2     3e-06    0.0019   17.3   0.1    16    60     3    46     1    87 0.84 Thi4 family
Thi4                 PF01946.12   230 sp|P54533|DLDH2_BACSU -            474     1e-06   28.0   0.9   2   2    0.0012      0.77    8.8   0.1    18    47   182   211   168   215 0.88 Thi4 family
FAD_binding_3        PF01494.14   356 sp|P54533|DLDH2_BACSU -            474   1.4e-06   27.6   0.7   1   2   0.00017      0.11   11.4   0.2     1    34     4    37     4   111 0.69 FAD binding domain
FAD_binding_3        PF01494.14   356 sp|P54533|DLDH2_BACSU -            474   1.4e-06   27.6   0.7   2   2     2e-05     0.013   14.6   0.0     4    34   184   214   182   271 0.91 FAD binding domain
NAD_binding_8        PF13450.1     68 sp|P54533|DLDH2_BACSU -            474   4.4e-05   23.4   7.1   1   2   0.00013     0.084   12.9   2.3     1    35     9    42     9    46 0.91 NAD(P)-binding Rossmann-like domain
NAD_binding_8        PF13450.1     68 sp|P54533|DLDH2_BACSU -            474   4.4e-05   23.4   7.1   2   2   0.00017      0.11   12.5   0.2     1    31   186   216   186   216 0.96 NAD(P)-binding Rossmann-like domain
HI0933_like          PF03486.9    409 sp|P54533|DLDH2_BACSU -            474     5e-05   21.9   6.1   1   3   1.7e-06    0.0011   17.5   0.5     1    33     5    37     5    45 0.92 HI0933-like protein
Trp_halogenase       PF04820.9    454 sp|P54533|DLDH2_BACSU -            474   0.00049   18.8   4.5   1   2   1.4e-05    0.0089   14.6   0.4     1    48     6    50     6    59 0.87 Tryptophan halogenase
K_oxygenase          PF13434.1    341 sp|P54533|DLDH2_BACSU -            474   0.00049   19.1   0.0   1   2   2.1e-05     0.014   14.3   0.0   139   239   135   228   127   231 0.77 L-lysine 6-monooxygenase (NADPH-requiring)
NAD_binding_7        PF13241.1    103 sp|P54533|DLDH2_BACSU -            474   0.00085   19.5   0.7   2   2    0.0002      0.13   12.5   0.0     8    41   182   220   174   297 0.76 Putative NAD(P)-binding
2-Hacid_dh_C         PF02826.14   178 sp|P54533|DLDH2_BACSU -            474     0.009   15.1   3.3   2   2   3.4e-05     0.022   13.9   0.1    37    91   182   234   163   284 0.82 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain
XdhC_C               PF13478.1    136 sp|P54533|DLDH2_BACSU -            474     0.023   15.0   0.1   2   2   0.00087      0.56   10.5   0.0     1    38   184   221   184   260 0.82 XdhC Rossmann domain
TrkA_N               PF02254.13   116 sp|P54533|DLDH2_BACSU -            474     0.086   12.8   1.8   1   1   0.00032      0.21   11.6   0.1     1    32   184   215   184   252 0.89 TrkA-N domain
RepB                 PF07506.6    185 sp|P54533|DLDH2_BACSU -            474      0.15   11.8   0.0   1   1    0.0005      0.32   10.8   0.0    53    87   195   232   190   264 0.81 RepB plasmid partitioning protein
Pyr_redox_2          PF07992.9    201 sp|O34324|DLDH3_BACSU -            458   4.3e-43  147.5   0.8   1   1   4.5e-45   2.7e-42  144.9   0.8     2   199     3   309     2   311 0.92 Pyridine nucleotide-disulphide oxidoreductase
Pyr_redox_dim        PF02852.17   110 sp|O34324|DLDH3_BACSU -            458   4.9e-33  113.4   0.4   1   1   1.6e-35   9.6e-33  112.5   0.4     1   109   339   447   339   448 0.99 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain
Pyr_redox            PF00070.22    80 sp|O34324|DLDH3_BACSU -            458   9.5e-25   86.8   4.7   2   2   3.7e-25   2.2e-22   79.2   0.1     1    71   172   242   172   248 0.96 Pyridine nucleotide-disulphide oxidoreductase
GIDA                 PF01134.17   392 sp|O34324|DLDH3_BACSU -            458   4.4e-14   52.1   0.9   1   3   4.1e-12   2.4e-09   36.5   0.0     3   150     4   142     2   161 0.77 Glucose inhibited division protein A
GIDA                 PF01134.17   392 sp|O34324|DLDH3_BACSU -            458   4.4e-14   52.1   0.9   2   3   0.00024      0.14   10.9   0.0     2    30   173   200   172   220 0.86 Glucose inhibited division protein A
Pyr_redox_3          PF13738.1    203 sp|O34324|DLDH3_BACSU -            458   1.1e-12   48.4   0.0   1   2   3.1e-12   1.9e-09   37.9   0.0     1   199     4   202     4   206 0.68 Pyridine nucleotide-disulphide oxidoreductase
DAO                  PF01266.19   358 sp|O34324|DLDH3_BACSU -            458   4.2e-10   39.0   8.1   1   3   2.8e-08   1.7e-05   23.9   0.2     2    35     3    36     2    73 0.92 FAD dependent oxidoreductase
DAO                  PF01266.19   358 sp|O34324|DLDH3_BACSU -            458   4.2e-10   39.0   8.1   2   3   2.7e-05     0.016   14.1   1.5     2    31   173   202   172   205 0.93 FAD dependent oxidoreductase
FAD_oxidored         PF12831.2    428 sp|O34324|DLDH3_BACSU -            458   8.2e-10   38.3   7.1   1   3   2.5e-11   1.5e-08   34.1   0.2     2    42     3    42     2   111 0.88 FAD dependent oxidoreductase
HI0933_like          PF03486.9    409 sp|O34324|DLDH3_BACSU -            458   2.1e-09   36.3  10.9   1   3   2.7e-09   1.6e-06   26.8   0.9     3    33     3    33     1    40 0.91 HI0933-like protein
HI0933_like          PF03486.9    409 sp|O34324|DLDH3_BACSU -            458   2.1e-09   36.3  10.9   3   3   9.9e-06    0.0059   15.1   0.1    86   163   189   265   184   269 0.84 HI0933-like protein
NAD_binding_8        PF13450.1     68 sp|O34324|DLDH3_BACSU -            458   5.9e-08   32.6   7.3   1   2   1.2e-07     7e-05   22.7   1.3     1    35     5    38     5    42 0.92 NAD(P)-binding Rossmann-like domain
NAD_binding_8        PF13450.1     68 sp|O34324|DLDH3_BACSU -            458   5.9e-08   32.6   7.3   2   2   0.00018       0.1   12.6   0.5     1    31   175   205   175   205 0.97 NAD(P)-binding Rossmann-like domain
3HCDH_N              PF02737.13   180 sp|O34324|DLDH3_BACSU -            458   1.3e-07   31.4   0.3   2   2   4.9e-07   0.00029   20.5   0.0     3    71   174   241   172   262 0.85 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain
FAD_binding_2        PF00890.19   417 sp|O34324|DLDH3_BACSU -            458   5.4e-07   28.7  15.2   1   4   2.2e-09   1.3e-06   27.5   0.3     3    38     4    37     2   101 0.88 FAD binding domain
Trp_halogenase       PF04820.9    454 sp|O34324|DLDH3_BACSU -            458   0.00012   20.8   1.0   1   2   4.2e-06    0.0025   16.5   0.1     2    51     3    49     2   107 0.80 Tryptophan halogenase
UDPG_MGDP_dh_N       PF03721.9    185 sp|O34324|DLDH3_BACSU -            458   0.00013   21.4   1.6   3   3   0.00068       0.4   10.0   0.0     4    63   174   233   171   248 0.78 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain
AlaDh_PNT_C          PF01262.16   168 sp|O34324|DLDH3_BACSU -            458   0.00019   21.0   1.2   2   2   7.9e-06    0.0047   16.5   0.0    20   100   170   257   166   266 0.70 Alanine dehydrogenase/PNT, C-terminal domain
NAD_binding_7        PF13241.1    103 sp|O34324|DLDH3_BACSU -            458   0.00034   20.8   0.4   2   2    0.0003      0.18   12.1   0.0    10    67   173   263   170   271 0.71 Putative NAD(P)-binding
FAD_binding_3        PF01494.14   356 sp|O34324|DLDH3_BACSU -            458   0.00094   18.3   8.4   1   3    0.0001      0.06   12.3   0.4     5    32     4    31     1    34 0.93 FAD binding domain
FAD_binding_3        PF01494.14   356 sp|O34324|DLDH3_BACSU -            458   0.00094   18.3   8.4   2   3     0.001      0.61    9.0   0.8     5    35   174   204   171   215 0.90 FAD binding domain
XdhC_C               PF13478.1    136 sp|O34324|DLDH3_BACSU -            458     0.002   18.4   0.0   2   2   0.00016     0.092   13.0   0.0     1    50   173   223   173   278 0.81 XdhC Rossmann domain
Lycopene_cycl        PF05834.7    374 sp|O34324|DLDH3_BACSU -            458    0.0034   16.3   4.6   1   2   0.00019      0.11   11.3   0.8     2    33     3    32     2    36 0.90 Lycopene cyclase protein
TrkA_N               PF02254.13   116 sp|O34324|DLDH3_BACSU -            458    0.0043   17.0   2.0   2   2    0.0013       0.8    9.7   0.1     2    36   174   208   173   226 0.79 TrkA-N domain
ApbA                 PF02558.11   151 sp|O34324|DLDH3_BACSU -            458    0.0067   15.8   5.0   2   2   0.00023      0.13   11.6   1.2     2    74   174   263   173   269 0.64 Ketopantoate reductase PanE/ApbA
2-Hacid_dh_C         PF02826.14   178 sp|O34324|DLDH3_BACSU -            458    0.0068   15.5   0.3   2   2    0.0016      0.95    8.5   0.0    28    72   163   206   152   224 0.72 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain
NAD_binding_9        PF13454.1    156 sp|O34324|DLDH3_BACSU -            458      0.24   11.1   9.6   1   3   0.00075      0.44   10.2   0.1     1    40     4    37     4    51 0.88 FAD-NAD(P)-binding
AMP-binding          PF00501.23   417 sp|P39581|DLTA_BACSU -            503   2.6e-92  309.3   0.0   1   1   4.2e-96   3.1e-92  309.1   0.0     2   416     8   403     7   404 0.84 AMP-binding enzyme
AMP-binding_C        PF13193.1     73 sp|P39581|DLTA_BACSU -            503   9.2e-09   36.1   0.1   1   1   3.3e-12   2.5e-08   34.7   0.1     1    73   412   491   412   491 0.89 AMP-binding enzyme C-terminal domain
MBOAT                PF03062.14   322 sp|P39580|DLTB_BACSU -            395   3.1e-72  243.4  32.7   2   2   6.3e-76   3.1e-72  243.4  32.7     3   319   104   388   102   391 0.96 MBOAT, membrane-bound O-acyltransferase family
DUF4405              PF14358.1     64 sp|P39580|DLTB_BACSU -            395      0.18   11.9   0.1   3   4   3.7e-05      0.18   11.9   0.1    12    52   246   288   242   289 0.92 Domain of unknown function (DUF4405)
YwiC                 PF14256.1    129 sp|P39580|DLTB_BACSU -            395       7.3    6.6  15.8   2   2   1.4e-05      0.07   13.2   5.2    28   122   280   374   267   381 0.71 YwiC-like protein
adh_short            PF00106.20   167 sp|P39577|DLTE_BACSU -            252   7.4e-35  120.3   0.0   1   1   8.3e-38   9.5e-35  119.9   0.0     1   166     6   170     6   171 0.96 short chain dehydrogenase
KR                   PF08659.5    181 sp|P39577|DLTE_BACSU -            252   2.6e-12   46.7   0.0   1   1   3.3e-15   3.7e-12   46.2   0.0     2   164     7   167     6   181 0.74 KR domain
adh_short_C2         PF13561.1    241 sp|P39577|DLTE_BACSU -            252   5.7e-08   32.8   0.0   1   1   6.9e-11   7.9e-08   32.3   0.0     6   161    15   166    12   186 0.85 Enoyl-(Acyl carrier protein) reductase
NAD_binding_10       PF13460.1    183 sp|P39577|DLTE_BACSU -            252   5.4e-05   23.2   0.0   1   1   7.5e-08   8.6e-05   22.6   0.0     1    53     8    64     8    72 0.91 NADH(P)-binding
F420_oxidored        PF03807.12    96 sp|P39577|DLTE_BACSU -            252    0.0013   19.1   0.1   1   1   2.2e-06    0.0025   18.1   0.1     8    61    15    62     7    68 0.83 NADP oxidoreductase coenzyme F420-dependent
Epimerase            PF01370.16   236 sp|P39577|DLTE_BACSU -            252    0.0021   17.5   0.0   1   1   3.1e-06    0.0035   16.8   0.0     1    60     8    68     8    91 0.82 NAD dependent epimerase/dehydratase family
Polysacc_synt_2      PF02719.10   294 sp|P39577|DLTE_BACSU -            252    0.0026   16.6   0.0   1   1   3.7e-06    0.0042   16.0   0.0     1    51     8    56     8    84 0.81 Polysaccharide biosynthesis protein
Pyr_redox            PF00070.22    80 sp|P39577|DLTE_BACSU -            252     0.023   15.0   0.1   1   1   7.8e-05     0.089   13.2   0.1     3    35     9    42     7    59 0.75 Pyridine nucleotide-disulphide oxidoreductase
Saccharop_dh         PF03435.13   386 sp|P39577|DLTE_BACSU -            252     0.029   13.3   0.0   1   1   3.4e-05     0.039   12.9   0.0     2    64     9    68     8    87 0.82 Saccharopine dehydrogenase
TrkA_N               PF02254.13   116 sp|P39577|DLTE_BACSU -            252     0.072   13.0   0.0   1   1    0.0001      0.12   12.4   0.0     8    52    16    62     8    85 0.83 TrkA-N domain
RmlD_sub_bind        PF04321.12   287 sp|P39577|DLTE_BACSU -            252     0.084   11.7   0.0   1   1   0.00011      0.13   11.1   0.0     2    51     7    56     6    85 0.85 RmlD substrate binding domain
3Beta_HSD            PF01073.14   280 sp|P39577|DLTE_BACSU -            252     0.088   11.4   0.0   1   1   0.00011      0.13   10.9   0.0     1    59     9    64     9    75 0.82 3-beta hydroxysteroid dehydrogenase/isomerase family
Oxidored_nitro       PF00148.14   398 sp|P39577|DLTE_BACSU -            252      0.12   11.0   0.0   1   1   0.00014      0.16   10.5   0.0   270   344     4    79     1    88 0.83 Nitrogenase component 1 type Oxidoreductase
Cupin_2              PF07883.6     71 sp|P96578|DLYKI_BACSU -            167   1.1e-05   24.8   2.3   1   2   2.4e-05      0.12   11.9   0.3     7    41    62   102    57   104 0.84 Cupin domain
Cupin_2              PF07883.6     71 sp|P96578|DLYKI_BACSU -            167   1.1e-05   24.8   2.3   2   2   1.8e-05     0.091   12.2   0.1    37    64   119   146   112   152 0.81 Cupin domain
DUF1498              PF07385.7    225 sp|P96578|DLYKI_BACSU -            167   0.00034   19.8   0.0   2   2   1.2e-06    0.0059   15.7   0.0   153   201   118   165   108   166 0.86 Protein of unknown function (DUF1498)
ARD                  PF03079.9    157 sp|P96578|DLYKI_BACSU -            167    0.0016   18.4   0.0   1   1   5.4e-07    0.0027   17.6   0.0   112   144   116   148   111   151 0.90 ARD/ARD' family
Bac_DnaA             PF00308.13   219 sp|P05648|DNAA_BACSU -            446  1.1e-103  345.6   0.0   1   1  1.8e-106  2.1e-103  344.7   0.0     1   217   111   327   111   329 0.99 Bacterial dnaA  protein
Bac_DnaA_C           PF08299.6     70 sp|P05648|DNAA_BACSU -            446   5.8e-33  112.5   0.1   1   1   1.2e-35   1.3e-32  111.4   0.1     1    70   355   424   355   424 0.99 Bacterial dnaA protein helix-turn-helix
DnaA_N               PF11638.3     65 sp|P05648|DNAA_BACSU -            446   1.8e-17   62.6   0.1   1   1   4.3e-20   4.9e-17   61.2   0.1     3    62     7    65     6    68 0.93 DnaA N-terminal domain
IstB_IS21            PF01695.12   178 sp|P05648|DNAA_BACSU -            446   3.7e-13   49.2   0.0   1   1   5.6e-16   6.4e-13   48.4   0.0    50   152   147   252   127   259 0.89 IstB-like ATP binding protein
AAA                  PF00004.24   132 sp|P05648|DNAA_BACSU -            446   1.9e-08   34.5   0.2   1   2   3.5e-09     4e-06   27.0   0.0     2   129   148   266   147   269 0.80 ATPase family associated with various cellular activities (AAA)
AFG1_ATPase          PF03969.11   362 sp|P05648|DNAA_BACSU -            446   9.6e-05   21.3   0.5   1   2   2.6e-05      0.03   13.1   0.1    59    81   141   163    82   175 0.83 AFG1-like ATPase
Arch_ATPase          PF01637.13   234 sp|P05648|DNAA_BACSU -            446   0.00012   21.8   0.9   1   2   1.7e-06    0.0019   17.9   0.3    19   122   143   245   136   248 0.61 Archaeal ATPase
DNA_pol3_a_NII       PF11490.3    117 sp|P05648|DNAA_BACSU -            446   0.00022   20.8   2.1   1   1   2.1e-07   0.00024   20.7   0.1     2    76     7    84     6   104 0.86 DNA polymerase III polC-type N-terminus II
RNA_helicase         PF00910.17   107 sp|P05648|DNAA_BACSU -            446   0.00051   20.1   0.0   1   1   1.3e-06    0.0015   18.7   0.0     1    76   147   236   147   254 0.77 RNA helicase
AAA_22               PF13401.1    131 sp|P05648|DNAA_BACSU -            446    0.0076   16.3   3.4   1   1   0.00076      0.87    9.7   1.3     7   113   147   238   142   247 0.53 AAA domain
DUF2075              PF09848.4    352 sp|P05648|DNAA_BACSU -            446      0.02   13.8   0.2   2   2   0.00076      0.87    8.4   0.0   108   166   195   264   180   274 0.82 Uncharacterized conserved protein (DUF2075)
DEK_C                PF08766.6     54 sp|P05648|DNAA_BACSU -            446     0.053   13.3   0.0   1   1   0.00015      0.17   11.6   0.0     6    43   339   376   334   377 0.94 DEK C terminal domain
AAA_25               PF13481.1    194 sp|P05648|DNAA_BACSU -            446     0.094   12.1   0.0   1   1   0.00022      0.25   10.7   0.0    36   103   147   211   142   266 0.74 AAA domain
DnaB_C               PF03796.10   259 sp|P37469|DNAC_BACSU -            454  5.6e-119  395.7   0.9   1   1  4.3e-122  9.1e-119  395.0   0.9     1   258   185   442   185   443 0.99 DnaB-like helicase C terminal domain
DnaB                 PF00772.16   103 sp|P37469|DNAC_BACSU -            454   9.7e-36  121.7   0.3   1   1   1.9e-38     4e-35  119.7   0.0     2   103    10   111     9   111 0.99 DnaB-like helicase N terminal domain
AAA_25               PF13481.1    194 sp|P37469|DNAC_BACSU -            454   3.6e-15   55.8   0.1   2   2   4.6e-18   9.7e-15   54.4   0.0    13   188   184   362   174   366 0.85 AAA domain
KaiC                 PF06745.8    227 sp|P37469|DNAC_BACSU -            454   2.8e-06   26.6   0.3   1   1   5.8e-09   1.2e-05   24.5   0.3     1   127   186   325   186   413 0.69 KaiC
AAA                  PF00004.24   132 sp|P37469|DNAC_BACSU -            454   0.00086   19.5   0.3   2   2   3.9e-06    0.0083   16.3   0.0     2   111   207   363   206   374 0.75 ATPase family associated with various cellular activities (AAA)
AAA_31               PF13614.1    157 sp|P37469|DNAC_BACSU -            454     0.014   15.2   0.2   1   1   3.2e-05     0.068   13.0   0.0     5    38   207   241   205   255 0.86 AAA domain
AAA_19               PF13245.1     76 sp|P37469|DNAC_BACSU -            454      0.11   12.2   0.0   1   1   0.00013      0.27   11.0   0.0     9    37   202   230   195   250 0.84 Part of AAA domain
Toprim_N             PF08275.6    128 sp|P05096|DNAG_BACSU -            603   1.9e-46  157.1   0.3   1   1   4.5e-49   5.6e-46  155.6   0.3     1   128   128   255   127   255 0.93 DNA primase catalytic core, N-terminal domain
zf-CHC2              PF01807.15    98 sp|P05096|DNAG_BACSU -            603   1.8e-39  133.2   0.0   1   1   3.8e-42   4.7e-39  131.8   0.0     2    95     6    99     5   102 0.97 CHC2 zinc finger
Toprim_4             PF13662.1     81 sp|P05096|DNAG_BACSU -            603   3.9e-16   58.8   0.3   1   1   9.4e-19   1.2e-15   57.3   0.1     2    79   263   337   262   339 0.94 Toprim domain
Toprim_2             PF13155.1     96 sp|P05096|DNAG_BACSU -            603   2.2e-15   56.7   0.0   1   1   5.6e-18   6.9e-15   55.1   0.0     1    95   265   349   265   350 0.94 Toprim-like
DnaB_bind            PF10410.4     59 sp|P05096|DNAG_BACSU -            603   3.1e-12   46.2   0.1   1   1   1.1e-14   1.4e-11   44.1   0.1     2    59   370   427   369   427 0.97 DnaB-helicase binding domain of primase
Toprim_3             PF13362.1     96 sp|P05096|DNAG_BACSU -            603   5.1e-07   29.8   0.0   1   1   1.3e-09   1.7e-06   28.2   0.0     3    94   265   354   263   356 0.86 Toprim domain
Toprim               PF01751.17   100 sp|P05096|DNAG_BACSU -            603   1.7e-06   27.9   0.1   1   1   5.7e-09   7.1e-06   25.9   0.1     3    95   265   335   263   340 0.88 Toprim domain
DnaB                 PF00772.16   103 sp|P05096|DNAG_BACSU -            603    0.0027   17.5   0.8   1   1   1.3e-05     0.016   15.1   0.5     6   101   468   560   464   562 0.86 DnaB-like helicase N terminal domain
DUF3854              PF12965.2    130 sp|P05096|DNAG_BACSU -            603    0.0037   16.8   0.0   1   1   8.6e-06     0.011   15.4   0.0    56   126   291   354   260   358 0.74 Domain of unknown function (DUF3854)
RecX                 PF02631.11   122 sp|P05096|DNAG_BACSU -            603    0.0092   16.1   4.6   1   2   0.00011      0.13   12.4   0.0    70   114   115   157   102   160 0.86 RecX family
PepX_N               PF09168.5    154 sp|P05096|DNAG_BACSU -            603    0.0093   16.2   0.9   1   1   2.9e-05     0.035   14.3   0.0   118   154   114   150    92   150 0.87 X-Prolyl dipeptidyl aminopeptidase PepX, N-terminal
Mrr_N                PF14338.1     92 sp|P05096|DNAG_BACSU -            603     0.014   15.4   0.3   1   1   0.00014      0.18   11.9   0.1     5    50   392   439   385   445 0.89 Mrr N-terminal domain
CTDII                PF01556.13    81 sp|P17631|DNAJ_BACSU -            375   4.3e-36  122.6   2.8   1   3   0.00014      0.34   10.8   0.0     1    41   117   157   117   183 0.83 DnaJ C terminal domain
CTDII                PF01556.13    81 sp|P17631|DNAJ_BACSU -            375   4.3e-36  122.6   2.8   2   3   2.6e-10   6.4e-07   29.1   0.2    15    69   205   256   198   263 0.86 DnaJ C terminal domain
CTDII                PF01556.13    81 sp|P17631|DNAJ_BACSU -            375   4.3e-36  122.6   2.8   3   3   1.2e-26   3.1e-23   81.4   0.2     1    80   267   344   267   345 0.95 DnaJ C terminal domain
DnaJ                 PF00226.26    64 sp|P17631|DNAJ_BACSU -            375   1.4e-27   95.2   5.3   1   1   1.1e-30   2.7e-27   94.2   5.3     1    64     5    66     5    66 0.99 DnaJ domain
DnaJ_CXXCXGXG        PF00684.14    66 sp|P17631|DNAJ_BACSU -            375   5.2e-15   55.2  18.9   1   1   3.8e-18   9.3e-15   54.4  18.9     1    66   145   209   145   209 0.99 DnaJ central domain
SRR                  PF07709.6     14 sp|P17631|DNAJ_BACSU -            375      0.11   12.7   2.7   1   1   6.1e-05      0.15   12.3   0.1     1    14    44    57    44    57 0.93 Seven Residue Repeat
Nudix_N_2            PF14803.1     34 sp|P17631|DNAJ_BACSU -            375         4    7.2  14.1   2   4   2.6e-05     0.064   12.9   2.8     3    29   162   192   161   193 0.90 Nudix N-terminal
HSP70                PF00012.15   602 sp|P17820|DNAK_BACSU -            611  5.7e-253  840.2  21.8   1   1  2.2e-253  5.3e-250  830.4  21.8     1   601     4   573     4   574 0.99 Hsp70 protein
MreB_Mbl             PF06723.8    327 sp|P17820|DNAK_BACSU -            611   2.2e-22   79.1   5.0   1   3   8.8e-26   2.2e-22   79.1   5.0     2   317     3   347     2   353 0.71 MreB/Mbl protein
DMRL_synthase        PF00885.14   144 sp|P17820|DNAK_BACSU -            611     0.068   12.8   0.1   1   2   2.7e-05     0.068   12.8   0.1    16    77   281   351   267   367 0.82 6,7-dimethyl-8-ribityllumazine synthase
Hydantoinase_A       PF01968.13   290 sp|P17820|DNAK_BACSU -            611     0.088   11.8   0.1   2   4   3.5e-05     0.088   11.8   0.1    52    97   136   182    92   194 0.85 Hydantoinase/oxoprolinase
DNA_ligase_aden      PF01653.13   315 sp|O31498|DNLJ_BACSU -            668    2e-135  450.7   0.0   1   1  3.4e-138  3.2e-135  450.1   0.0     2   315     5   314     4   314 0.98 NAD-dependent DNA ligase adenylation domain
DNA_ligase_OB        PF03120.11    82 sp|O31498|DNLJ_BACSU -            668   2.5e-35  119.9   4.0   1   1     6e-38   5.5e-35  118.8   4.0     2    81   317   396   316   397 0.98 NAD-dependent DNA ligase OB-fold domain
HHH_2                PF12826.2     64 sp|O31498|DNLJ_BACSU -            668   2.9e-25   87.9   1.2   1   1   1.4e-27   1.3e-24   85.8   0.3     1    64   505   568   505   568 0.98 Helix-hairpin-helix motif
HHH_5                PF14520.1     60 sp|O31498|DNLJ_BACSU -            668   5.5e-18   64.8   0.1   1   2   1.2e-09   1.1e-06   28.7   0.0     3    59   439   496   437   497 0.93 Helix-hairpin-helix domain
HHH_5                PF14520.1     60 sp|O31498|DNLJ_BACSU -            668   5.5e-18   64.8   0.1   2   2   5.3e-11   4.9e-08   33.0   0.1     8    58   510   559   502   561 0.92 Helix-hairpin-helix domain
BRCT                 PF00533.21    78 sp|O31498|DNLJ_BACSU -            668   2.5e-13   49.9   0.0   1   1   7.4e-16   6.8e-13   48.5   0.0     4    74   593   662   590   663 0.96 BRCA1 C Terminus (BRCT) domain
DNA_ligase_ZBD       PF03119.11    28 sp|O31498|DNLJ_BACSU -            668   4.1e-12   45.5   6.7   1   1     1e-14   9.7e-12   44.3   6.7     1    28   403   429   403   429 0.98 NAD-dependent DNA ligase C4 zinc finger domain
HHH                  PF00633.18    30 sp|O31498|DNLJ_BACSU -            668   1.3e-07   30.8   0.1   1   1   4.3e-10     4e-07   29.3   0.1     1    30   529   558   529   558 0.95 Helix-hairpin-helix motif
PTCB-BRCT            PF12738.2     63 sp|O31498|DNLJ_BACSU -            668   2.6e-06   27.1   0.0   1   1   7.7e-09   7.1e-06   25.7   0.0     4    58   601   656   599   659 0.87 twin BRCT domain
zf-NADH-PPase        PF09297.6     32 sp|O31498|DNLJ_BACSU -            668    0.0064   15.9   1.0   1   1   1.4e-05     0.013   15.0   1.0     6    27   404   427   404   429 0.96 NADH pyrophosphatase zinc ribbon domain
5_3_exonuc           PF01367.15   101 sp|O31498|DNLJ_BACSU -            668     0.009   16.2   1.1   1   2   0.00089      0.82    9.9   0.0    22    46   511   535   510   543 0.90 5'-3' exonuclease, C-terminal SAM fold
RNA_pol_A_CTD        PF03118.10    67 sp|O31498|DNLJ_BACSU -            668     0.011   15.1   3.0   1   2   0.00097       0.9    9.0   0.4    33    65   463   495   449   497 0.89 Bacterial RNA polymerase, alpha chain C terminal domain
Zn-ribbon_8          PF09723.5     42 sp|O31498|DNLJ_BACSU -            668     0.023   14.6   0.4   2   2   0.00053      0.49   10.3   0.1    25    39   400   413   395   414 0.78 Zinc ribbon domain
zf-tcix              PF14952.1     44 sp|O31498|DNLJ_BACSU -            668     0.037   13.3   0.3   1   1   8.2e-05     0.076   12.3   0.3    13    38   403   432   402   434 0.87 Putative treble-clef, zinc-finger, Zn-binding
HHH_3                PF12836.2     65 sp|O31498|DNLJ_BACSU -            668     0.082   12.8   0.0   1   1   0.00031      0.28   11.1   0.0     7    48   532   573   527   576 0.87 Helix-hairpin-helix motif
zf-IS66              PF13005.2     47 sp|O31498|DNLJ_BACSU -            668      0.15   12.0   3.2   1   1    0.0002      0.19   11.7   1.0     2    20   401   418   400   422 0.90 zinc-finger binding domain of transposase IS66
zf-C4_Topoisom       PF01396.14    39 sp|O31498|DNLJ_BACSU -            668      0.36   10.3   1.2   1   1    0.0009      0.83    9.2   1.2     3    16   403   416   402   430 0.79 Topoisomerase DNA binding C4 zinc finger
DNA_pol_A            PF00476.15   383 sp|O34996|DPO1_BACSU -            880  2.4e-145  483.9   0.3   1   1  2.2e-148  3.6e-145  483.4   0.3     1   383   499   879   499   879 0.99 DNA polymerase family A
5_3_exonuc_N         PF02739.11   169 sp|O34996|DPO1_BACSU -            880     1e-66  223.4   0.1   1   1   1.6e-69   2.6e-66  222.1   0.1     1   169     5   171     5   171 0.99 5'-3' exonuclease, N-terminal resolvase-like domain
5_3_exonuc           PF01367.15   101 sp|O34996|DPO1_BACSU -            880     1e-35  121.9   0.2   1   1   2.5e-38   4.2e-35  120.0   0.2     1   100   173   272   173   273 0.98 5'-3' exonuclease, C-terminal SAM fold
HHH_2                PF12826.2     64 sp|O34996|DPO1_BACSU -            880    0.0015   18.3   0.0   1   1   2.8e-06    0.0046   16.7   0.0     7    31   194   218   192   224 0.92 Helix-hairpin-helix motif
HHH_5                PF14520.1     60 sp|O34996|DPO1_BACSU -            880    0.0042   17.2   0.3   1   1   2.6e-06    0.0042   17.2   0.3     8    43   193   226   186   294 0.77 Helix-hairpin-helix domain
UBA_3                PF09288.5     55 sp|O34996|DPO1_BACSU -            880      0.01   15.3   0.0   1   1   2.2e-05     0.036   13.6   0.0    13    38   258   283   255   292 0.89 Fungal ubiquitin-associated domain
HHH                  PF00633.18    30 sp|O34996|DPO1_BACSU -            880     0.088   12.5   0.4   1   1   0.00019      0.32   10.7   0.4    16    28   195   207   192   208 0.90 Helix-hairpin-helix motif
Enkurin              PF13864.1     98 sp|O34996|DPO1_BACSU -            880       0.1   12.8   4.6   1   1   2.6e-05     0.043   14.0   1.1    24    92   456   524   442   529 0.88 Calmodulin-binding
DNA_pol3_alpha       PF07733.7    426 sp|O34623|DPO3A_BACSU -           1115  1.1e-176  587.5   0.0   1   1    6e-180  1.5e-176  587.0   0.0     1   425   281   703   281   704 0.99 Bacterial DNA polymerase III alpha subunit
PHP                  PF02811.14   175 sp|O34623|DPO3A_BACSU -           1115   2.2e-27   95.9   0.0   1   1   5.8e-30   1.4e-26   93.3   0.0     1   164     4   166     4   171 0.94 PHP domain
HHH_6                PF14579.1     90 sp|O34623|DPO3A_BACSU -           1115   1.7e-25   88.8   0.0   1   1   2.3e-28   5.6e-25   87.2   0.0     1    90   777   865   777   865 0.97 Helix-hairpin-helix motif
tRNA_anti-codon      PF01336.20    75 sp|O34623|DPO3A_BACSU -           1115   5.2e-08   32.6   0.0   1   1   5.4e-11   1.3e-07   31.3   0.0     7    74   963  1030   960  1031 0.91 OB-fold nucleic acid binding domain
DUF4539              PF15072.1     86 sp|O34623|DPO3A_BACSU -           1115   0.00035   20.2   0.0   1   1   3.4e-07   0.00083   18.9   0.0    10    55   962  1009   956  1011 0.85 Domain of unknown function (DUF4539)
tRNA_anti_2          PF13742.1     99 sp|O34623|DPO3A_BACSU -           1115     0.019   14.8   0.0   1   1   2.3e-05     0.058   13.2   0.0    26    86   959  1019   941  1029 0.81 OB-fold nucleic acid binding domain
DNA_pol3_delta2      PF13177.1    162 sp|P09122|DPO3X_BACSU -            563   9.1e-49  165.2   0.2   1   2   7.2e-49   5.9e-46  156.0   0.0     1   161    20   178    20   179 0.97 DNA polymerase III, delta subunit
DNA_pol3_gamma3      PF12169.3    143 sp|P09122|DPO3X_BACSU -            563   6.5e-15   55.1   0.3   1   1   2.8e-17   2.3e-14   53.3   0.1     9   141   240   376   232   378 0.85 DNA polymerase III subunits gamma and tau domain III
AAA                  PF00004.24   132 sp|P09122|DPO3X_BACSU -            563   3.3e-12   46.7   0.0   1   1   1.5e-14   1.3e-11   44.8   0.0     2   125    42   174    41   180 0.75 ATPase family associated with various cellular activities (AAA)
TIP49                PF06068.8    398 sp|P09122|DPO3X_BACSU -            563   1.4e-06   27.2   0.2   2   2   1.9e-06    0.0015   17.3   0.3   281   395   122   224    88   227 0.85 TIP49 C-terminus
RuvB_N               PF05496.7    234 sp|P09122|DPO3X_BACSU -            563   1.6e-06   27.3   0.1   1   1   1.5e-08   1.3e-05   24.4   0.1    16    79     8    67     2   228 0.89 Holliday junction DNA helicase ruvB N-terminus
AAA_22               PF13401.1    131 sp|P09122|DPO3X_BACSU -            563   3.9e-05   23.8   0.0   1   1   3.7e-07   0.00031   20.9   0.0     7   117    41   150    36   163 0.68 AAA domain
AAA_16               PF13191.1    185 sp|P09122|DPO3X_BACSU -            563   0.00033   20.6   0.2   1   1   3.5e-06    0.0029   17.6   0.0     2    51    18    65    17   117 0.82 AAA ATPase domain
AAA_5                PF07728.9    139 sp|P09122|DPO3X_BACSU -            563   0.00039   20.1   0.0   1   2   7.3e-06     0.006   16.3   0.0     3    91    42   145    40   151 0.82 AAA domain (dynein-related subfamily)
PIF1                 PF05970.9    364 sp|P09122|DPO3X_BACSU -            563    0.0023   16.9   0.0   1   1   5.5e-06    0.0045   15.9   0.0     6   127    21   144    18   149 0.82 PIF1-like helicase
AAA_17               PF13207.1    121 sp|P09122|DPO3X_BACSU -            563    0.0023   18.7   0.0   1   1     1e-05    0.0086   16.8   0.0     3    77    42   127    41   179 0.63 AAA domain
AAA_30               PF13604.1    196 sp|P09122|DPO3X_BACSU -            563    0.0031   17.1   0.0   1   1     1e-05    0.0086   15.6   0.0    20   120    40   146    26   153 0.69 AAA domain
Rep_fac_C            PF08542.6     89 sp|P09122|DPO3X_BACSU -            563    0.0067   16.3   0.7   1   1   9.5e-05     0.078   12.9   0.0     3    51   244   292   242   301 0.91 Replication factor C C-terminal domain
Rad17                PF03215.10   519 sp|P09122|DPO3X_BACSU -            563    0.0072   15.0   0.1   1   2   0.00014      0.11   11.1   0.0    11    70     8    63     2    84 0.76 Rad17 cell cycle checkpoint protein
Mg_chelatase         PF01078.16   207 sp|P09122|DPO3X_BACSU -            563     0.027   13.6   0.0   1   1   6.4e-05     0.053   12.6   0.0     2    43    15    59    14    84 0.85 Magnesium chelatase, subunit ChlI
AAA_14               PF13173.1    128 sp|P09122|DPO3X_BACSU -            563     0.039   13.8   0.0   1   1   0.00019      0.15   11.9   0.0     4    89    40   148    38   162 0.61 AAA domain
NPV_P10              PF05531.7     75 sp|P09122|DPO3X_BACSU -            563     0.046   13.9   1.6   2   2   0.00082      0.68   10.2   0.0    28    73   362   434   352   436 0.89 Nucleopolyhedrovirus P10 protein
T2SE                 PF00437.15   272 sp|P09122|DPO3X_BACSU -            563     0.047   12.5   0.0   1   2    0.0005      0.41    9.5   0.0   103   153    14    63     7    69 0.84 Type II/IV secretion system protein
DUF815               PF05673.8    250 sp|P09122|DPO3X_BACSU -            563     0.062   12.2   0.0   1   1   0.00016      0.13   11.1   0.0    25    79    13    64     4    69 0.81 Protein of unknown function (DUF815)
DNA_pol3_alpha       PF07733.7    426 sp|P13267|DPO3_BACSU -           1437  4.3e-108  361.4   0.0   1   1    2e-108  1.8e-105  352.8   0.0     2   424   825  1246   824  1248 0.95 Bacterial DNA polymerase III alpha subunit
PHP                  PF02811.14   175 sp|P13267|DPO3_BACSU -           1437     6e-64  215.0   0.7   1   1   2.4e-66   2.1e-63  213.2   0.5     1   173   335   716   335   727 0.99 PHP domain
RNase_T              PF00929.19   164 sp|P13267|DPO3_BACSU -           1437   3.8e-42  144.3   1.5   1   1   5.6e-45   4.9e-42  144.0   0.4     1   164   422   578   422   578 0.97 Exonuclease
DNA_pol3_a_NII       PF11490.3    117 sp|P13267|DPO3_BACSU -           1437   1.2e-31  108.6   5.7   1   1   3.2e-34   2.8e-31  107.5   5.7     1   115    96   207    96   209 0.98 DNA polymerase III polC-type N-terminus II
DNA_pol3_a_NI        PF14480.1     76 sp|P13267|DPO3_BACSU -           1437   1.3e-26   92.0   4.7   1   1   4.1e-29   3.6e-26   90.6   4.7     2    76    10    84     9    84 0.98 DNA polymerase III polC-type N-terminus I
HHH_6                PF14579.1     90 sp|P13267|DPO3_BACSU -           1437   1.6e-11   44.0   0.0   1   1   1.1e-13   9.4e-11   41.6   0.0     4    87  1352  1433  1349  1436 0.89 Helix-hairpin-helix motif
tRNA_anti-codon      PF01336.20    75 sp|P13267|DPO3_BACSU -           1437   6.3e-06   25.9   0.2   1   1   1.7e-08   1.5e-05   24.7   0.2     1    71   238   315   238   322 0.88 OB-fold nucleic acid binding domain
HHH_3                PF12836.2     65 sp|P13267|DPO3_BACSU -           1437   4.4e-05   23.3   0.0   2   2   6.4e-06    0.0055   16.6   0.0    18    59  1378  1418  1375  1423 0.88 Helix-hairpin-helix motif
zf-ribbon_3          PF13248.1     26 sp|P13267|DPO3_BACSU -           1437    0.0088   15.2   3.1   1   1   2.1e-05     0.019   14.1   3.1     4    26   911   944   909   944 0.83 zinc-ribbon domain
RNase_H_2            PF13482.1    164 sp|P13267|DPO3_BACSU -           1437     0.011   15.5   2.6   2   2   0.00017      0.15   11.8   0.1     1   116   422   561   422   576 0.73 RNase_H superfamily
DZR                  PF12773.2     50 sp|P13267|DPO3_BACSU -           1437     0.057   13.2   0.8   1   1    0.0002      0.17   11.7   0.9     1    23   912   945   912   953 0.85 Double zinc ribbon
zf-IS66              PF13005.2     47 sp|P13267|DPO3_BACSU -           1437      0.35   10.8   5.0   2   2    0.0004      0.35   10.8   0.3     2    18   934   950   933   954 0.91 zinc-finger binding domain of transposase IS66
zinc_ribbon_2        PF13240.1     23 sp|P13267|DPO3_BACSU -           1437       1.8    8.1   5.6   1   1    0.0003      0.26   10.8   0.4    15    23   936   944   934   948 0.57 zinc-ribbon domain
Auto_anti-p27        PF06677.7     41 sp|P13267|DPO3_BACSU -           1437       3.8    7.3   6.1   1   1   0.00033      0.29   10.9   0.4    12    33   929   948   926   950 0.78 Sjogren's syndrome/scleroderma autoantigen 1 (Autoantigen p27)
IMS                  PF00817.15   149 sp|P54545|DPO41_BACSU -            414   7.5e-51  171.8   0.0   1   1   4.8e-54   1.2e-50  171.2   0.0     1   149    11   158    11   158 0.97 impB/mucB/samB family
IMS_C                PF11799.3    127 sp|P54545|DPO41_BACSU -            414   6.6e-22   77.7   0.1   1   1   5.5e-25   1.4e-21   76.7   0.1    10   127   245   358   236   358 0.95 impB/mucB/samB family C-terminal domain
IMS_HHH              PF11798.3     32 sp|P54545|DPO41_BACSU -            414   4.9e-10   38.8   0.3   1   1   5.2e-13   1.3e-09   37.5   0.3     4    32   173   201   170   201 0.96 IMS family HHH motif
HHH_5                PF14520.1     60 sp|P54545|DPO41_BACSU -            414   5.3e-06   26.5   0.3   1   1   5.2e-09   1.3e-05   25.2   0.3    12    47   187   223   183   233 0.89 Helix-hairpin-helix domain
DNA_pol_lambd_f      PF10391.4     52 sp|P54545|DPO41_BACSU -            414    0.0022   17.4   0.0   1   1   2.1e-06    0.0052   16.3   0.0     7    38   185   217   183   221 0.86 Fingers domain of DNA polymerase lambda
Cdd1                 PF11731.3     93 sp|P54545|DPO41_BACSU -            414    0.0027   17.6   0.1   1   2   2.4e-05     0.059   13.2   0.0    17    48   185   216   180   259 0.89 Pathogenicity locus
IMS                  PF00817.15   149 sp|P54560|DPO42_BACSU -            412   2.2e-44  150.8   0.0   1   1   7.5e-48   3.7e-44  150.1   0.0     1   149    10   158    10   158 0.97 impB/mucB/samB family
IMS_C                PF11799.3    127 sp|P54560|DPO42_BACSU -            412   3.7e-21   75.3   0.0   1   1   1.2e-24   6.1e-21   74.6   0.0     8   127   246   363   238   363 0.89 impB/mucB/samB family C-terminal domain
IMS_HHH              PF11798.3     32 sp|P54560|DPO42_BACSU -            412   0.00023   21.0   0.0   1   1   1.1e-07   0.00055   19.8   0.0     8    32   180   204   173   204 0.92 IMS family HHH motif
Peptidase_M55        PF04951.8    265 sp|P26902|DPPA_BACSU -            274  2.5e-101  338.3   0.0   1   1  1.9e-105  2.8e-101  338.1   0.0     1   265     1   264     1   264 0.99 D-aminopeptidase
BPD_transp_1         PF00528.17   185 sp|P26903|DPPB_BACSU -            308   1.8e-40  138.4  17.0   2   2   3.6e-44   1.8e-40  138.4  17.0     1   184   112   303   112   304 0.99 Binding-protein-dependent transport system inner membrane component
DUF3687              PF12459.3     42 sp|P26903|DPPB_BACSU -            308     0.058   12.6   1.1   1   1   2.4e-05      0.12   11.6   0.4     9    27   272   290   264   293 0.83 D-Ala-teichoic acid biosynthesis protein
BPD_transp_1         PF00528.17   185 sp|P26904|DPPC_BACSU -            320   6.6e-30  103.9  12.6   2   2   8.9e-34   6.6e-30  103.9  12.6     1   185   135   320   131   320 0.94 Binding-protein-dependent transport system inner membrane component
OppC_N               PF12911.2     56 sp|P26904|DPPC_BACSU -            320   1.4e-22   78.7   0.2   1   2   1.9e-26   1.4e-22   78.7   0.2     1    56    40    95    40    95 0.95 N-terminal TM domain of oligopeptide transport permease C
ABC_tran             PF00005.22   137 sp|P26905|DPPD_BACSU -            335   2.6e-30  105.4   0.0   1   1   4.3e-33   3.7e-30  104.9   0.0     2   136    25   183    24   184 0.92 ABC transporter
oligo_HPY            PF08352.7     64 sp|P26905|DPPD_BACSU -            335     9e-19   67.5   0.1   1   1   1.8e-21   1.6e-18   66.8   0.1     2    64   236   299   235   299 0.98 Oligopeptide/dipeptide transporter, C-terminal region
AAA_21               PF13304.1    303 sp|P26905|DPPD_BACSU -            335   3.5e-11   43.6   0.1   2   2     1e-12   8.9e-10   38.9   0.0   226   300   145   217    67   220 0.84 AAA domain
SMC_N                PF02463.14   220 sp|P26905|DPPD_BACSU -            335   3.6e-05   23.0   0.0   1   1   7.1e-08   6.2e-05   22.3   0.0    26   212    36   229    24   236 0.76 RecF/RecN/SMC N terminal domain
AAA_10               PF12846.2    304 sp|P26905|DPPD_BACSU -            335   0.00037   20.0   0.5   1   2   0.00048      0.42   10.0   0.1     4    23    37    56    34    71 0.87 AAA-like domain
AAA_15               PF13175.1    415 sp|P26905|DPPD_BACSU -            335   0.00053   19.1   0.2   2   2   2.9e-06    0.0025   16.9   0.2   372   411   176   215   166   219 0.93 AAA ATPase domain
AAA_22               PF13401.1    131 sp|P26905|DPPD_BACSU -            335   0.00067   19.8   0.9   1   1   2.6e-05     0.022   14.8   0.9     7   124    37   214    31   221 0.65 AAA domain
ATP-synt_ab          PF00006.20   215 sp|P26905|DPPD_BACSU -            335    0.0035   16.8   0.2   1   1   1.1e-05    0.0093   15.4   0.0    10    36    29    55    20    66 0.90 ATP synthase alpha/beta family, nucleotide-binding domain
ABC_ATPase           PF09818.4    448 sp|P26905|DPPD_BACSU -            335    0.0053   15.4   1.0   2   2   0.00022      0.19   10.2   0.4   376   420   194   238   143   254 0.74 Predicted ATPase of the ABC class
AAA_25               PF13481.1    194 sp|P26905|DPPD_BACSU -            335    0.0076   15.6   0.1   1   2   0.00098      0.86    8.9   0.0    30    54    31    55    21    72 0.89 AAA domain
AAA_29               PF13555.1     62 sp|P26905|DPPD_BACSU -            335     0.023   14.1   0.1   1   1     5e-05     0.043   13.3   0.1    15    50    27    61    19    66 0.79 P-loop containing region of AAA domain
Mg_chelatase         PF01078.16   207 sp|P26905|DPPD_BACSU -            335     0.035   13.2   0.0   1   1   0.00014      0.12   11.4   0.0    24    51    36    63    16    68 0.85 Magnesium chelatase, subunit ChlI
FtsK_SpoIIIE         PF01580.13   205 sp|P26905|DPPD_BACSU -            335     0.074   12.5   0.0   1   1   0.00016      0.14   11.5   0.0    23    59    19    55     8    63 0.85 FtsK/SpoIIIE family
DUF258               PF03193.11   161 sp|P26905|DPPD_BACSU -            335      0.14   11.3   0.1   1   1   0.00029      0.25   10.5   0.0    15    51    12    50     1    87 0.77 Protein of unknown function, DUF258
AAA_16               PF13191.1    185 sp|P26905|DPPD_BACSU -            335      0.15   12.0   0.1   1   1   0.00041      0.36   10.7   0.1    24    44    34    54    23    67 0.87 AAA ATPase domain
AAA_23               PF13476.1    202 sp|P26905|DPPD_BACSU -            335      0.16   12.3   0.0   1   1   0.00023       0.2   11.9   0.0    11    45    25    60     5   211 0.74 AAA domain
SBP_bac_5            PF00496.17   374 sp|P26906|DPPE_BACSU -            543   1.2e-85  287.6  14.4   1   1   1.2e-89   1.8e-85  287.0  14.4     1   372    86   465    86   467 0.92 Bacterial extracellular solute-binding proteins, family 5 Middle
Tyr_Deacylase        PF02580.11   145 sp|O32042|DTD_BACSU  -            146     3e-60  202.4   0.1   1   1   2.2e-64   3.3e-60  202.2   0.1     1   145     2   145     2   145 0.99 D-Tyr-tRNA(Tyr) deacylase
Dus                  PF01207.12   310 sp|P37567|DUS1_BACSU -            333  9.4e-114  379.4   1.2   1   1  7.7e-117  1.1e-113  379.1   1.2     1   307    14   320    14   324 0.98 Dihydrouridine synthase (Dus)
Oxidored_FMN         PF00724.15   341 sp|P37567|DUS1_BACSU -            333   2.4e-09   36.6   0.8   1   2   0.00024      0.36    9.7   0.0     6    25     2    21     1    31 0.89 NADH:flavin oxidoreductase / NADH oxidase family
Oxidored_FMN         PF00724.15   341 sp|P37567|DUS1_BACSU -            333   2.4e-09   36.6   0.8   2   2   9.3e-09   1.4e-05   24.2   0.3   244   335   153   240   123   246 0.63 NADH:flavin oxidoreductase / NADH oxidase family
His_biosynth         PF00977.16   229 sp|P37567|DUS1_BACSU -            333     5e-07   29.2   0.4   2   2   1.7e-09   2.5e-06   26.9   0.1   126   224   129   230   116   233 0.86 Histidine biosynthesis protein
DHO_dh               PF01180.16   295 sp|P37567|DUS1_BACSU -            333   0.00043   19.3   0.1   1   2   0.00052      0.77    8.6   0.0   103   169    72   142    46   162 0.67 Dihydroorotate dehydrogenase
DHO_dh               PF01180.16   295 sp|P37567|DUS1_BACSU -            333   0.00043   19.3   0.1   2   2   0.00048      0.71    8.7   0.0   233   263   187   215   182   245 0.76 Dihydroorotate dehydrogenase
NanE                 PF04131.9    192 sp|P37567|DUS1_BACSU -            333    0.0016   17.4   0.0   1   1   2.2e-06    0.0032   16.4   0.0   120   175   170   228   139   242 0.80 Putative N-acetylmannosamine-6-phosphate epimerase
PEP_mutase           PF13714.1    238 sp|P37567|DUS1_BACSU -            333    0.0023   17.2   0.2   1   2   5.3e-06    0.0079   15.4   0.1    52   107   118   173   115   197 0.81 Phosphoenolpyruvate phosphomutase
ThiG                 PF05690.9    247 sp|P37567|DUS1_BACSU -            333    0.0037   16.3   0.1   1   1     4e-06    0.0059   15.7   0.1   137   206   157   228   113   242 0.83 Thiazole biosynthesis protein ThiG
TIM                  PF00121.13   244 sp|P37567|DUS1_BACSU -            333     0.038   13.0   0.0   1   1   7.4e-05      0.11   11.5   0.0   198   235   192   230   173   234 0.80 Triosephosphate isomerase
Dus                  PF01207.12   310 sp|O31546|DUS2_BACSU -            325   6.7e-48  163.0   0.0   1   1   5.6e-52   8.3e-48  162.7   0.0     1   306    15   317    15   321 0.90 Dihydrouridine synthase (Dus)
DXP_redisom_C        PF08436.7     84 sp|O31753|DXR_BACSU  -            383   8.8e-43  144.0   0.1   1   1     6e-46   1.8e-42  143.1   0.1     1    84   144   227   144   227 0.99 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal
DXP_reductoisom      PF02670.11   129 sp|O31753|DXR_BACSU  -            383   9.5e-43  145.8   0.6   1   1   7.1e-46   2.1e-42  144.7   0.2     1   129     4   130     4   130 0.99 1-deoxy-D-xylulose 5-phosphate reductoisomerase
DXPR_C               PF13288.1    121 sp|O31753|DXR_BACSU  -            383   1.9e-42  144.0   0.0   1   1   1.1e-45   3.4e-42  143.2   0.0     1   120   259   377   259   378 0.96 DXP reductoisomerase C-terminal domain
Semialdhyde_dh       PF01118.19   121 sp|O31753|DXR_BACSU  -            383    0.0022   18.2   0.3   1   2   1.4e-05     0.041   14.1   0.0     1    73     3    74     3   118 0.67 Semialdehyde dehydrogenase, NAD binding domain
NAD_binding_3        PF03447.11   117 sp|O31753|DXR_BACSU  -            383     0.021   15.2   0.6   1   2   9.5e-05      0.28   11.5   0.2     3    95    11   127    10   142 0.64 Homoserine dehydrogenase, NAD binding domain
DXP_synthase_N       PF13292.1    270 sp|P54523|DXS_BACSU  -            633  5.1e-112  373.2   0.0   1   1  5.1e-115  9.5e-112  372.3   0.0     2   270     4   278     3   278 0.97 1-deoxy-D-xylulose-5-phosphate synthase
Transket_pyr         PF02779.19   178 sp|P54523|DXS_BACSU  -            633   2.3e-38  131.4   0.5   1   2   9.6e-41   1.8e-37  128.5   0.7     3   174   316   477   314   479 0.97 Transketolase, pyrimidine binding domain
Transketolase_C      PF02780.15   124 sp|P54523|DXS_BACSU  -            633   9.1e-33  112.8   0.0   1   1   1.8e-35   3.3e-32  111.0   0.0     1   124   493   615   493   615 0.98 Transketolase, C-terminal domain
Transketolase_N      PF00456.16   333 sp|P54523|DXS_BACSU  -            633   5.5e-08   31.9   0.1   1   2   3.9e-08   7.2e-05   21.7   0.1    19   196    36   186    20   201 0.82 Transketolase, thiamine diphosphate binding domain
TPP_enzyme_C         PF02775.16   153 sp|P54523|DXS_BACSU  -            633     4e-05   23.2   2.2   1   1   1.2e-07   0.00022   20.8   0.2    32    85   117   176    96   276 0.77 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain
DUF987               PF06174.6     66 sp|P54523|DXS_BACSU  -            633    0.0051   16.2   0.0   1   1   7.2e-06     0.013   14.9   0.0    25    64   193   232   175   234 0.92 Protein of unknown function (DUF987)
DUF2188              PF09954.4     62 sp|P54523|DXS_BACSU  -            633    0.0079   16.0   0.0   1   1   1.3e-05     0.024   14.5   0.0     9    49   493   532   481   537 0.85 Uncharacterized protein conserved in bacteria (DUF2188)
E1_dh                PF00676.15   300 sp|P54523|DXS_BACSU  -            633     0.011   14.4   0.0   1   2   2.1e-05     0.039   12.6   0.0   108   162   120   174    91   183 0.81 Dehydrogenase E1 component
DHFR_1               PF00186.14   161 sp|P11045|DYR_BACSU  -            168     2e-65  219.3   0.0   1   1   1.5e-69   2.2e-65  219.1   0.0     1   161     1   159     1   159 0.99 Dihydrofolate reductase
Glyco_hydro_43       PF04616.9    286 sp|P94522|EABN1_BACSU -            323   3.1e-52  177.4   4.7   1   1   5.3e-56   3.9e-52  177.1   4.7     9   286    41   321    38   321 0.95 Glycosyl hydrolases family 43
Glyco_hydro_32N      PF00251.15   308 sp|P94522|EABN1_BACSU -            323    0.0014   18.0   1.8   1   2   0.00012      0.87    8.8   0.0   130   175    43    86    28    92 0.83 Glycosyl hydrolases family 32 N-terminal domain
Glyco_hydro_43       PF04616.9    286 sp|P42293|EABN2_BACSU -            469   1.6e-35  122.6   5.7   1   1   5.6e-37   8.3e-33  113.6   5.7     4   286    29   360    26   360 0.87 Glycosyl hydrolases family 43
Multi_Drug_Res       PF00893.14    93 sp|P0CW80|EBRA_BACSU -            105   9.7e-33  112.5   4.8   1   1   3.1e-36   1.2e-32  112.2   4.8     2    93     4    95     3    95 0.98 Small Multidrug Resistance protein
EmrE                 PF13536.1    113 sp|P0CW80|EBRA_BACSU -            105   1.7e-08   34.6   5.8   1   1     5e-12   1.9e-08   34.5   5.8    12   106     7   104     1   105 0.77 Multidrug resistance efflux transporter
EamA                 PF00892.15   126 sp|P0CW80|EBRA_BACSU -            105    0.0013   18.7   8.0   1   1   8.2e-07    0.0031   17.5   8.0    58   125    35   103     1   104 0.68 EamA-like transporter family
UPF0546              PF10639.4    113 sp|P0CW80|EBRA_BACSU -            105    0.0041   16.9   1.0   1   1   1.7e-06    0.0064   16.2   0.9    55   112    42   102    20   103 0.74 Uncharacterised protein family UPF0546
Multi_Drug_Res       PF00893.14    93 sp|P0CW82|EBRB_BACSU -            117   3.9e-31  107.3   7.3   1   1   2.4e-34   5.9e-31  106.7   7.3     3    93     4    94     2    94 0.98 Small Multidrug Resistance protein
EmrE                 PF13536.1    113 sp|P0CW82|EBRB_BACSU -            117   3.9e-08   33.4   7.7   1   1   1.8e-11   4.4e-08   33.3   7.7    15   111     9   108     1   110 0.78 Multidrug resistance efflux transporter
EamA                 PF00892.15   126 sp|P0CW82|EBRB_BACSU -            117   0.00027   20.9  13.8   1   1   1.6e-07   0.00039   20.4  13.8    55   125    33   102     3   103 0.75 EamA-like transporter family
UPF0060              PF02694.10   107 sp|P0CW82|EBRB_BACSU -            117    0.0079   16.2   4.9   1   1   3.7e-06     0.009   16.0   4.9     3   102     2   102     1   107 0.86 Uncharacterised BCR, YnfA/UPF0060 family
UPF0546              PF10639.4    113 sp|P0CW82|EBRB_BACSU -            117     0.028   14.2   1.9   1   1   1.3e-05     0.031   14.0   1.9    58   111    47   100    10   102 0.90 Uncharacterised protein family UPF0546
TPT                  PF03151.11   153 sp|P0CW82|EBRB_BACSU -            117      0.11   12.2   6.4   1   1   6.3e-05      0.16   11.6   6.4   116   150    66   100     4   103 0.90 Triose-phosphate Transporter family
ABC_tran             PF00005.22   137 sp|P40735|ECFA1_BACSU -            281     4e-36  124.3   0.0   1   1   9.5e-39   5.7e-36  123.8   0.0     1   137    25   171    25   171 0.97 ABC transporter
SMC_N                PF02463.14   220 sp|P40735|ECFA1_BACSU -            281   2.5e-10   39.9   0.2   1   1   2.2e-12   1.3e-09   37.6   0.2    26   209    37   213    28   221 0.74 RecF/RecN/SMC N terminal domain
AAA_21               PF13304.1    303 sp|P40735|ECFA1_BACSU -            281   1.8e-08   34.7   0.1   1   2   1.2e-06   0.00071   19.6   0.1     3    22    39    58    38    86 0.83 AAA domain
AAA_21               PF13304.1    303 sp|P40735|ECFA1_BACSU -            281   1.8e-08   34.7   0.1   2   2   0.00013     0.075   12.9   0.0   220   285   126   188    74   205 0.75 AAA domain
AAA_22               PF13401.1    131 sp|P40735|ECFA1_BACSU -            281   1.6e-05   25.0   0.3   1   1   3.2e-07   0.00019   21.5   0.3     7   128    38   204    31   206 0.71 AAA domain
AAA_29               PF13555.1     62 sp|P40735|ECFA1_BACSU -            281   3.9e-05   23.0   0.0   1   1   1.4e-07   8.1e-05   22.0   0.0    22    51    34    63    24    69 0.82 P-loop containing region of AAA domain
ABC_ATPase           PF09818.4    448 sp|P40735|ECFA1_BACSU -            281   9.5e-05   21.1   0.0   1   2    0.0012      0.73    8.3   0.0   241   265    31    56    20    61 0.84 Predicted ATPase of the ABC class
ABC_ATPase           PF09818.4    448 sp|P40735|ECFA1_BACSU -            281   9.5e-05   21.1   0.0   2   2   0.00023      0.14   10.7   0.0   324   402   144   222   131   226 0.95 Predicted ATPase of the ABC class
AAA                  PF00004.24   132 sp|P40735|ECFA1_BACSU -            281    0.0006   20.0   0.3   1   2    0.0001      0.06   13.5   0.0     3    52    40    91    38   101 0.88 ATPase family associated with various cellular activities (AAA)
AAA_25               PF13481.1    194 sp|P40735|ECFA1_BACSU -            281   0.00064   19.1   0.6   1   1   8.1e-06    0.0048   16.3   0.6    30   188    32   201     8   205 0.57 AAA domain
Mg_chelatase         PF01078.16   207 sp|P40735|ECFA1_BACSU -            281   0.00068   18.8   0.0   1   2   6.6e-05     0.039   13.1   0.0    25    55    38    69    19    97 0.72 Magnesium chelatase, subunit ChlI
AAA_23               PF13476.1    202 sp|P40735|ECFA1_BACSU -            281   0.00072   19.9   0.1   1   1   3.2e-06    0.0019   18.5   0.1    23    42    39    58    38    97 0.86 AAA domain
AAA_16               PF13191.1    185 sp|P40735|ECFA1_BACSU -            281    0.0009   19.2   0.2   1   1   3.5e-06    0.0021   18.1   0.2     9    56    21    69    14   209 0.66 AAA ATPase domain
AAA_17               PF13207.1    121 sp|P40735|ECFA1_BACSU -            281    0.0012   19.6   0.1   1   1   4.4e-06    0.0026   18.5   0.1     3    21    39    57    38   239 0.85 AAA domain
AAA_30               PF13604.1    196 sp|P40735|ECFA1_BACSU -            281    0.0017   17.9   0.1   1   1   1.9e-05     0.011   15.2   0.1    20   115    37   183    27   199 0.64 AAA domain
IstB_IS21            PF01695.12   178 sp|P40735|ECFA1_BACSU -            281    0.0047   16.3   0.0   1   2    0.0002      0.12   11.7   0.0    19    67     9    55     4    59 0.83 IstB-like ATP binding protein
SbcCD_C              PF13558.1     90 sp|P40735|ECFA1_BACSU -            281     0.006   16.4   0.1   1   1   0.00013     0.075   12.9   0.1    32    89   142   186   119   187 0.73 Putative exonuclease SbcCD, C subunit
AAA_10               PF12846.2    304 sp|P40735|ECFA1_BACSU -            281    0.0085   15.5   0.6   1   2     0.001       0.6    9.4   0.1     5    22    39    56    37    68 0.83 AAA-like domain
AAA_13               PF13166.1    712 sp|P40735|ECFA1_BACSU -            281     0.013   14.0   0.0   1   1   2.9e-05     0.017   13.6   0.0    21    43    40    62    38   114 0.78 AAA domain
AAA_33               PF13671.1    143 sp|P40735|ECFA1_BACSU -            281     0.016   15.0   0.0   1   1     8e-05     0.047   13.5   0.0     3    19    39    55    38    76 0.90 AAA domain
MobB                 PF03205.9    140 sp|P40735|ECFA1_BACSU -            281     0.022   14.4   0.0   1   1   0.00018      0.11   12.2   0.0     3    20    38    55    36    63 0.89 Molybdopterin guanine dinucleotide synthesis protein B
AAA_18               PF13238.1    129 sp|P40735|ECFA1_BACSU -            281     0.045   14.0   0.5   1   1   0.00015      0.09   13.0   0.2     2    23    39    65    38   231 0.84 AAA domain
DUF258               PF03193.11   161 sp|P40735|ECFA1_BACSU -            281     0.053   12.7   0.0   1   1   0.00014     0.082   12.0   0.0    33    59    33    59     4    88 0.77 Protein of unknown function, DUF258
NB-ARC               PF00931.17   287 sp|P40735|ECFA1_BACSU -            281     0.071   11.9   0.0   1   1   0.00021      0.12   11.1   0.0    18    39    34    55    19    57 0.86 NB-ARC domain
NACHT                PF05729.7    166 sp|P40735|ECFA1_BACSU -            281     0.093   12.3   0.0   1   1   0.00041      0.24   11.0   0.0     3    20    38    55    36    61 0.89 NACHT domain
MMR_HSR1             PF01926.18   116 sp|P40735|ECFA1_BACSU -            281      0.12   12.2   0.2   1   1   0.00038      0.22   11.4   0.2     3    20    39    56    38   217 0.85 50S ribosome-binding GTPase
ABC_tran             PF00005.22   137 sp|P70970|ECFA2_BACSU -            276   2.8e-33  115.1   0.1   1   1   7.9e-36   3.9e-33  114.6   0.1     2   137    11   161    10   161 0.94 ABC transporter
AAA_21               PF13304.1    303 sp|P70970|ECFA2_BACSU -            276   1.7e-14   54.4   0.0   1   2   0.00029      0.14   12.0   0.2     3    64    24   101    22   126 0.68 AAA domain
AAA_21               PF13304.1    303 sp|P70970|ECFA2_BACSU -            276   1.7e-14   54.4   0.0   2   2     3e-13   1.5e-10   41.5   0.0   223   298   119   192    64   194 0.78 AAA domain
SMC_N                PF02463.14   220 sp|P70970|ECFA2_BACSU -            276   2.6e-07   30.0   0.0   1   1   8.9e-10   4.4e-07   29.3   0.0    25   209    21   204    11   213 0.72 RecF/RecN/SMC N terminal domain
AAA_15               PF13175.1    415 sp|P70970|ECFA2_BACSU -            276   2.9e-05   23.3   0.0   1   2   0.00035      0.17   10.8   0.1    18    86    11   111     4   125 0.74 AAA ATPase domain
AAA_15               PF13175.1    415 sp|P70970|ECFA2_BACSU -            276   2.9e-05   23.3   0.0   2   2   0.00043      0.21   10.5   0.0   372   411   153   192   140   194 0.94 AAA ATPase domain
AAA_22               PF13401.1    131 sp|P70970|ECFA2_BACSU -            276   8.4e-05   22.7   0.3   1   1   1.9e-06   0.00095   19.3   0.3     4   123    20   190    17   196 0.67 AAA domain
AAA_16               PF13191.1    185 sp|P70970|ECFA2_BACSU -            276   0.00012   22.1   0.0   1   1   4.8e-07   0.00024   21.1   0.0    15    58    10    54     7    96 0.81 AAA ATPase domain
AAA_29               PF13555.1     62 sp|P70970|ECFA2_BACSU -            276   0.00012   21.4   0.2   1   1   5.8e-07   0.00029   20.3   0.2    22    51    19    48    11    55 0.83 P-loop containing region of AAA domain
DUF258               PF03193.11   161 sp|P70970|ECFA2_BACSU -            276    0.0014   17.7   0.2   1   1     5e-06    0.0025   17.0   0.2    28    67    12    52     5    78 0.82 Protein of unknown function, DUF258
AAA_30               PF13604.1    196 sp|P70970|ECFA2_BACSU -            276    0.0015   18.1   0.0   1   1   5.4e-06    0.0027   17.3   0.0    17    68    19    76    13    84 0.87 AAA domain
AAA_10               PF12846.2    304 sp|P70970|ECFA2_BACSU -            276    0.0015   18.0   0.5   1   2   0.00035      0.17   11.2   0.2     3    21    22    40    20    51 0.85 AAA-like domain
AAA_17               PF13207.1    121 sp|P70970|ECFA2_BACSU -            276    0.0023   18.7   0.1   1   1   8.1e-06     0.004   17.9   0.1     2    46    23    70    23   182 0.82 AAA domain
T2SE                 PF00437.15   272 sp|P70970|ECFA2_BACSU -            276    0.0038   16.1   0.1   1   1   1.7e-05    0.0083   15.0   0.1   121   159    13    51     2    53 0.83 Type II/IV secretion system protein
Miro                 PF08477.8    119 sp|P70970|ECFA2_BACSU -            276    0.0047   17.4   0.2   1   1   1.9e-05    0.0096   16.4   0.2     2    33    23    55    22    96 0.65 Miro-like protein
NACHT                PF05729.7    166 sp|P70970|ECFA2_BACSU -            276    0.0047   16.5   0.1   1   1   1.8e-05     0.009   15.6   0.1     2    25    22    45    21    53 0.86 NACHT domain
Mg_chelatase         PF01078.16   207 sp|P70970|ECFA2_BACSU -            276     0.005   16.0   0.0   1   1   1.8e-05    0.0091   15.1   0.0    25    73    23    71    12    91 0.80 Magnesium chelatase, subunit ChlI
AAA_23               PF13476.1    202 sp|P70970|ECFA2_BACSU -            276    0.0055   17.0   0.0   1   1   1.7e-05    0.0082   16.4   0.0    22    64    23    68    12   132 0.71 AAA domain
MobB                 PF03205.9    140 sp|P70970|ECFA2_BACSU -            276    0.0081   15.8   0.1   1   1   2.7e-05     0.014   15.1   0.1     3    24    23    44    21    95 0.78 Molybdopterin guanine dinucleotide synthesis protein B
GTP_EFTU             PF00009.22   188 sp|P70970|ECFA2_BACSU -            276     0.018   14.4   0.0   1   1   6.1e-05      0.03   13.7   0.0     6    28    23    45    18    88 0.82 Elongation factor Tu GTP binding domain
AAA_18               PF13238.1    129 sp|P70970|ECFA2_BACSU -            276     0.022   15.0   0.7   1   1   6.2e-05     0.031   14.5   0.7     1    35    23    66    23   179 0.81 AAA domain
AAA_25               PF13481.1    194 sp|P70970|ECFA2_BACSU -            276     0.022   14.1   0.1   1   2    0.0005      0.25   10.7   0.1    30    53    17    40     3    62 0.88 AAA domain
ABC_ATPase           PF09818.4    448 sp|P70970|ECFA2_BACSU -            276     0.023   13.2   2.4   2   2     0.001      0.51    8.8   0.1   376   413   171   208   153   215 0.89 Predicted ATPase of the ABC class
Dynamin_N            PF00350.18   168 sp|P70970|ECFA2_BACSU -            276     0.027   14.3   0.3   1   1   8.6e-05     0.043   13.6   0.3     1    20    23    42    23    78 0.88 Dynamin family
AAA_33               PF13671.1    143 sp|P70970|ECFA2_BACSU -            276     0.027   14.3   0.0   1   1   0.00012     0.061   13.1   0.1     2    20    23    44    22    92 0.75 AAA domain
DUF87                PF01935.12   229 sp|P70970|ECFA2_BACSU -            276     0.048   13.4   0.4   1   1   0.00018     0.087   12.6   0.4    26    43    23    40    14    57 0.88 Domain of unknown function DUF87
MMR_HSR1             PF01926.18   116 sp|P70970|ECFA2_BACSU -            276     0.049   13.5   0.3   1   1    0.0002     0.099   12.6   0.3     2    20    23    41    22    95 0.81 50S ribosome-binding GTPase
FtsK_SpoIIIE         PF01580.13   205 sp|P70970|ECFA2_BACSU -            276      0.05   13.0   0.1   1   1   0.00024      0.12   11.8   0.1    37    58    19    40     8    41 0.83 FtsK/SpoIIIE family
SbcCD_C              PF13558.1     90 sp|P70970|ECFA2_BACSU -            276     0.051   13.4   0.0   1   1   0.00036      0.18   11.7   0.0    63    88   150   175   107   177 0.88 Putative exonuclease SbcCD, C subunit
PduV-EutP            PF10662.4    143 sp|P70970|ECFA2_BACSU -            276     0.057   12.9   0.1   1   1   0.00026      0.13   11.7   0.1     4    24    23    43    21    60 0.82 Ethanolamine utilisation - propanediol utilisation
ATP_bind_1           PF03029.12   238 sp|P70970|ECFA2_BACSU -            276      0.14   11.6   0.1   1   1   0.00054      0.27   10.7   0.1     1    23    25    47    25    53 0.85 Conserved hypothetical ATP binding protein
CbiQ                 PF02361.11   224 sp|P70972|ECFT_BACSU -            265   1.7e-66  223.9   7.9   1   1   1.8e-70   2.7e-66  223.3   7.9     2   224    14   237    13   237 0.99 Cobalt transport protein
ABC_tran             PF00005.22   137 sp|P55339|ECSA_BACSU -            247   3.1e-29  102.0   0.0   1   1   2.6e-32   4.3e-29  101.5   0.0     1   136    19   162    19   163 0.92 ABC transporter
AAA_21               PF13304.1    303 sp|P55339|ECSA_BACSU -            247   3.5e-14   53.4   0.0   1   2    0.0002      0.34   10.8   0.1     3    56    33    85    31   100 0.62 AAA domain
AAA_21               PF13304.1    303 sp|P55339|ECSA_BACSU -            247   3.5e-14   53.4   0.0   2   2   1.9e-13   3.1e-10   40.4   0.0   221   297   119   192    94   194 0.89 AAA domain
AAA_15               PF13175.1    415 sp|P55339|ECSA_BACSU -            247   5.1e-05   22.5   0.0   2   2     3e-05     0.049   12.6   0.0   372   411   155   193   131   195 0.89 AAA ATPase domain
AAA_29               PF13555.1     62 sp|P55339|ECSA_BACSU -            247    0.0033   16.9   0.0   1   1   3.2e-06    0.0052   16.2   0.0    16    56    23    63    18    69 0.81 P-loop containing region of AAA domain
Zeta_toxin           PF06414.7    201 sp|P55339|ECSA_BACSU -            247    0.0063   15.6   0.0   1   1   5.5e-06     0.009   15.1   0.0    18    62    31    76    18   114 0.81 Zeta toxin
AAA_23               PF13476.1    202 sp|P55339|ECSA_BACSU -            247     0.014   15.7   0.1   1   1   1.4e-05     0.023   15.0   0.1    11    39    20    49    11    58 0.82 AAA domain
ArgK                 PF03308.11   267 sp|P55339|ECSA_BACSU -            247     0.047   12.4   0.1   1   1   4.3e-05     0.071   11.8   0.1    19    50    19    50    12    60 0.80 ArgK protein
DUF258               PF03193.11   161 sp|P55339|ECSA_BACSU -            247      0.12   11.5   0.0   1   1   0.00012      0.19   10.8   0.0    26    65    19    59     6    69 0.82 Protein of unknown function, DUF258
Peptidase_M75        PF09375.5    288 sp|P39596|EFEM_BACSU -            385   3.1e-40  138.3   5.1   2   2   1.7e-43   3.1e-40  138.3   5.1     2   287   151   380   150   381 0.94 Imelysin
PCYCGC               PF13798.1    158 sp|P39596|EFEM_BACSU -            385     0.035   13.7   0.3   1   1   7.5e-05      0.14   11.8   0.1     9    61    12    63     5    94 0.77 Protein of unknown function with PCYCGC motif
Syntaxin-6_N         PF09177.6     97 sp|P39596|EFEM_BACSU -            385     0.053   13.9  14.9   1   5   9.3e-05      0.17   12.2   0.2     6    55    39    87    37    89 0.92 Syntaxin 6, N-terminal
DASH_Dad1            PF08649.5     58 sp|P39596|EFEM_BACSU -            385      0.14   11.8   2.3   1   1   6.4e-05      0.12   12.1   0.5     7    56    36    87    33    89 0.87 DASH complex subunit Dad1
Laminin_II           PF06009.7    138 sp|P39596|EFEM_BACSU -            385       7.1    6.3  14.3   2   3   0.00022      0.41   10.4   0.4    13    72    96   155    94   205 0.79 Laminin Domain II
Dyp_perox            PF04261.7    313 sp|P39597|EFEN_BACSU -            416  1.4e-110  368.9   0.0   1   1  2.2e-114  1.7e-110  368.6   0.0     1   313    66   405    66   405 0.98 Dyp-type peroxidase family
TAT_signal           PF10518.4     26 sp|P39597|EFEN_BACSU -            416   2.6e-05   23.8   1.3   1   2     1e-08   7.7e-05   22.3   0.4     2    25    11    34    10    35 0.91 TAT (twin-arginine translocation) pathway signal sequence
FTR1                 PF03239.9    306 sp|P39595|EFEU_BACSU -            481   1.9e-90  302.9   8.6   1   1   6.4e-94   2.4e-90  302.6   8.6     1   306     9   395     9   395 0.99 Iron permease FTR1 family
DUF4363              PF14276.1    121 sp|P39595|EFEU_BACSU -            481   0.00072   19.2  10.1   1   3   3.5e-06     0.013   15.1   1.2    22    75    24    79     4    88 0.76 Domain of unknown function (DUF4363)
Asparaginase         PF00710.15   313 sp|P39595|EFEU_BACSU -            481     0.019   13.8   0.0   1   1   9.9e-06     0.037   12.9   0.0   176   253    54   140    33   145 0.80 Asparaginase
GTP_EFTU             PF00009.22   188 sp|P80868|EFG_BACSU  -            692   1.8e-65  219.9   0.0   1   1   2.5e-68   4.2e-65  218.7   0.0     2   187     9   279     8   280 0.95 Elongation factor Tu GTP binding domain
EFG_IV               PF03764.13   120 sp|P80868|EFG_BACSU  -            692   1.4e-44  150.4   0.0   1   1     2e-47   3.3e-44  149.2   0.0     1   120   477   596   477   596 0.99 Elongation factor G, domain IV
EFG_II               PF14492.1     75 sp|P80868|EFG_BACSU  -            692   7.6e-37  125.0   0.1   1   1     1e-39   1.7e-36  123.9   0.1     1    74   402   475   402   476 0.99 Elongation Factor G, domain II
EFG_C                PF00679.19    89 sp|P80868|EFG_BACSU  -            692   1.1e-32  111.7   0.2   1   1   2.7e-35   4.5e-32  109.7   0.2     1    88   598   684   598   685 0.98 Elongation factor G C-terminus
GTP_EFTU_D2          PF03144.20    74 sp|P80868|EFG_BACSU  -            692   5.1e-15   55.3   0.1   1   1   1.2e-17   1.9e-14   53.4   0.1     1    74   322   389   322   389 0.96 Elongation factor Tu domain 2
MMR_HSR1             PF01926.18   116 sp|P80868|EFG_BACSU  -            692   0.00022   21.1   0.0   1   1   2.8e-07   0.00047   20.1   0.0     3   116    14   136    12   136 0.70 50S ribosome-binding GTPase
AIG1                 PF04548.11   212 sp|P80868|EFG_BACSU  -            692    0.0021   17.1   0.0   1   1   2.3e-06    0.0038   16.3   0.0    31    67    57    93    15   103 0.87 AIG1 family
Nol1_Nop2_Fmu_2      PF13636.1    102 sp|P80868|EFG_BACSU  -            692     0.024   14.6   0.0   1   1   3.4e-05     0.057   13.5   0.0    40    75   210   249   197   267 0.76 pre-rRNA processing and ribosome biogenesis
Miro                 PF08477.8    119 sp|P80868|EFG_BACSU  -            692      0.14   12.7   0.0   1   1    0.0002      0.33   11.4   0.0    10   119    21   138    12   138 0.77 Miro-like protein
EFP_N                PF08207.7     58 sp|P49778|EFP_BACSU  -            185   1.6e-30  104.7   0.2   1   1   5.3e-34   2.6e-30  104.0   0.2     1    58     3    60     3    60 0.99 Elongation factor P (EF-P) KOW-like domain
Elong-fact-P_C       PF09285.6     56 sp|P49778|EFP_BACSU  -            185   4.2e-26   90.0   0.7   2   2   8.6e-30   4.2e-26   90.0   0.7     1    56   129   184   129   184 0.99 Elongation factor P, C-terminal
EFP                  PF01132.15    55 sp|P49778|EFP_BACSU  -            185   2.8e-21   74.9   5.0   1   2   5.7e-25   2.8e-21   74.9   5.0     2    54    68   120    67   121 0.97 Elongation factor P (EF-P) OB domain
EF_TS                PF00889.14   221 sp|P80700|EFTS_BACSU -            293   8.8e-81  270.4   4.9   1   1   2.4e-84   1.2e-80  270.0   4.9     1   221    56   274    56   274 0.99 Elongation factor TS
UBA                  PF00627.26    37 sp|P80700|EFTS_BACSU -            293   7.7e-12   44.6   0.1   1   1   5.4e-15   2.7e-11   42.9   0.1     1    37     3    40     3    40 0.97 UBA/TS-N domain
HBS1_N               PF08938.5     79 sp|P80700|EFTS_BACSU -            293      0.14   12.2   0.1   1   1   2.8e-05      0.14   12.2   0.1    34    79    10    52     2    52 0.80 HBS1 N-terminus
GTP_EFTU             PF00009.22   188 sp|P33166|EFTU_BACSU -            396     1e-63  214.2   0.1   1   1   7.4e-67   1.4e-63  213.7   0.1     1   188    10   203    10   203 0.95 Elongation factor Tu GTP binding domain
GTP_EFTU_D3          PF03143.12    99 sp|P33166|EFTU_BACSU -            396   7.1e-34  115.9   0.8   2   2   2.3e-36   4.2e-33  113.4   0.1     1    98   300   394   300   395 0.98 Elongation factor Tu C-terminal domain
GTP_EFTU_D2          PF03144.20    74 sp|P33166|EFTU_BACSU -            396   8.1e-20   70.7   2.5   1   1   1.1e-22   2.1e-19   69.3   2.5     1    74   226   296   226   296 0.98 Elongation factor Tu domain 2
MMR_HSR1             PF01926.18   116 sp|P33166|EFTU_BACSU -            396   1.8e-05   24.6   0.0   1   1   2.7e-08     5e-05   23.2   0.0     2   113    15   134    14   138 0.70 50S ribosome-binding GTPase
Miro                 PF08477.8    119 sp|P33166|EFTU_BACSU -            396     0.022   15.2   0.0   1   1   2.8e-05     0.051   14.0   0.0     3   119    16   140    14   140 0.73 Miro-like protein
DLIC                 PF05783.6    472 sp|P33166|EFTU_BACSU -            396     0.044   12.4   0.2   1   2   0.00012      0.23   10.0   0.0    24    64    11    51     4    63 0.85 Dynein light intermediate chain (DLIC)
cobW                 PF02492.14   178 sp|P33166|EFTU_BACSU -            396     0.067   12.6   0.3   2   2   0.00015      0.27   10.6   0.0   105   172    91   160    80   164 0.73 CobW/HypB/UreG, nucleotide-binding domain
AAA_29               PF13555.1     62 sp|P33166|EFTU_BACSU -            396      0.11   11.9   0.2   1   1   0.00017      0.32   10.5   0.2    23    49    12    38     2    48 0.78 P-loop containing region of AAA domain
HhH-GPD              PF00730.20   108 sp|P39788|END3_BACSU -            219   2.8e-23   82.2   0.0   1   1   1.6e-26   3.5e-23   81.9   0.0     1   106    35   169    35   171 0.95 HhH-GPD superfamily base excision DNA repair protein
HHH                  PF00633.18    30 sp|P39788|END3_BACSU -            219   6.7e-10   38.1   0.0   1   1     6e-13   1.3e-09   37.2   0.0     1    29   100   128   100   129 0.94 Helix-hairpin-helix motif
EndIII_4Fe-2S        PF10576.4     17 sp|P39788|END3_BACSU -            219   0.00062   19.8   7.4   1   1   7.2e-07    0.0015   18.6   7.4     1    17   189   205   189   205 0.99 Iron-sulfur binding domain of endonuclease III
MutS_II              PF05188.12   137 sp|P39788|END3_BACSU -            219    0.0074   16.3   0.0   1   1   1.2e-05     0.026   14.5   0.0    20   103     2   108     1   131 0.91 MutS domain II
HHH_5                PF14520.1     60 sp|P39788|END3_BACSU -            219     0.034   14.3   0.1   1   1   5.9e-05      0.12   12.5   0.1    36    52   108   124    49   130 0.91 Helix-hairpin-helix domain
HHH_8                PF14716.1     68 sp|P39788|END3_BACSU -            219     0.034   14.3   0.0   1   1   3.1e-05     0.066   13.4   0.0    15    63    71   126    66   129 0.78 Helix-hairpin-helix domain
EDR1                 PF14381.1    205 sp|P39788|END3_BACSU -            219     0.087   12.3   0.0   1   1   6.1e-05      0.13   11.8   0.0    75   124    70   117    60   142 0.81 Ethylene-responsive protein kinase Le-CTR1
AP_endonuc_2         PF01261.19   213 sp|P54476|END4_BACSU -            297   2.9e-36  124.7   0.6   1   1   2.6e-40   3.9e-36  124.3   0.6     3   213    22   237    21   237 0.93 Xylose isomerase-like TIM barrel
RHH_1                PF01402.16    39 sp|P96621|ENDAI_BACSU -             93   9.3e-07   28.4   0.3   1   1   1.1e-10   1.7e-06   27.6   0.3     3    37    11    45    10    47 0.95 Ribbon-helix-helix protein, copG family
PemK                 PF02452.12   110 sp|P96622|ENDOA_BACSU -            116   5.7e-33  113.4   0.1   1   1   4.3e-37   6.4e-33  113.2   0.1     1   110     4   111     4   111 0.92 PemK-like protein
MMR_HSR1             PF01926.18   116 sp|P38424|ENGB_BACSU -            195   1.3e-20   73.4   0.0   1   1   1.7e-23   2.1e-20   72.8   0.0     1   116    25   143    25   143 0.90 50S ribosome-binding GTPase
FeoB_N               PF02421.13   156 sp|P38424|ENGB_BACSU -            195   2.5e-09   36.5   0.0   1   1   2.5e-12   3.1e-09   36.3   0.0     2   151    25   184    24   189 0.76 Ferrous iron transport protein B
Miro                 PF08477.8    119 sp|P38424|ENGB_BACSU -            195   4.1e-08   33.7   0.0   1   1   5.2e-11   6.4e-08   33.1   0.0     2   119    26   145    25   145 0.71 Miro-like protein
Dynamin_N            PF00350.18   168 sp|P38424|ENGB_BACSU -            195   7.3e-07   29.1   0.1   1   2   7.6e-06    0.0094   15.7   0.2     1    27    26    52    26    62 0.86 Dynamin family
Dynamin_N            PF00350.18   168 sp|P38424|ENGB_BACSU -            195   7.3e-07   29.1   0.1   2   2   0.00016       0.2   11.4   0.0    97   167    65   143    56   144 0.77 Dynamin family
AIG1                 PF04548.11   212 sp|P38424|ENGB_BACSU -            195   2.6e-06   26.7   0.0   1   1   2.6e-09   3.2e-06   26.3   0.0     3   137    26   155    24   185 0.80 AIG1 family
DUF258               PF03193.11   161 sp|P38424|ENGB_BACSU -            195   0.00014   21.0   0.0   1   1   1.8e-07   0.00023   20.4   0.0    39   107    27    89    23   104 0.78 Protein of unknown function, DUF258
GTP_EFTU             PF00009.22   188 sp|P38424|ENGB_BACSU -            195    0.0024   17.3   0.2   2   2   4.9e-05     0.061   12.7   0.1    88   154   100   166    94   194 0.74 Elongation factor Tu GTP binding domain
Septin               PF00735.13   281 sp|P38424|ENGB_BACSU -            195    0.0036   16.3   0.4   1   2   1.3e-05     0.016   14.1   0.0     7    39    26    58    21   108 0.65 Septin
SRPRB                PF09439.5    181 sp|P38424|ENGB_BACSU -            195     0.032   13.4   0.0   1   1   4.5e-05     0.056   12.6   0.0     4    85    24   115    22   148 0.68 Signal recognition particle receptor beta subunit
FtsK_SpoIIIE         PF01580.13   205 sp|P38424|ENGB_BACSU -            195     0.042   13.3   0.0   1   2   0.00038      0.48    9.8   0.0    37    60    22    45     6    67 0.81 FtsK/SpoIIIE family
MobB                 PF03205.9    140 sp|P38424|ENGB_BACSU -            195     0.054   13.2   0.0   1   2   0.00016       0.2   11.3   0.0     3    23    26    46    24    61 0.90 Molybdopterin guanine dinucleotide synthesis protein B
RNA_helicase         PF00910.17   107 sp|P38424|ENGB_BACSU -            195      0.11   12.6   0.0   1   1   0.00015      0.18   11.9   0.0     2    43    27    73    26   121 0.79 RNA helicase
Enolase_C            PF00113.17   296 sp|P37869|ENO_BACSU  -            430  1.8e-142  473.5   1.3   1   1  6.1e-146  2.3e-142  473.3   1.3     2   293   140   425   139   428 0.98 Enolase, C-terminal TIM barrel domain
Enolase_N            PF03952.11   132 sp|P37869|ENO_BACSU  -            430   6.1e-63  210.6   0.0   1   1   3.3e-66   1.2e-62  209.6   0.0     2   132     4   134     3   134 0.99 Enolase, N-terminal domain
MAAL_C               PF07476.6    249 sp|P37869|ENO_BACSU  -            430   6.8e-06   25.1   0.1   1   1   4.1e-09   1.5e-05   24.0   0.1   134   221   303   389   259   394 0.86 Methylaspartate ammonia-lyase C-terminus
MR_MLE_C             PF13378.1    111 sp|P37869|ENO_BACSU  -            430     0.012   15.5   0.0   1   1   9.5e-06     0.035   14.0   0.0    11    72   325   388   317   422 0.72 Enolase C-terminal domain-like
Glycos_transf_1      PF00534.15   172 sp|P71055|EPSF_BACSU -            384   2.2e-26   92.3   0.0   1   1   1.3e-29   3.2e-26   91.7   0.0     3   123   192   309   190   352 0.96 Glycosyl transferases group 1
Glyco_trans_4_4      PF13579.1    160 sp|P71055|EPSF_BACSU -            384     3e-16   59.9   0.0   1   2   2.4e-17     6e-14   52.5   0.0     1   160    18   178    18   178 0.88 Glycosyl transferase 4-like domain
Glyco_trans_1_4      PF13692.1    135 sp|P71055|EPSF_BACSU -            384   2.1e-13   50.6   0.0   1   1   1.8e-16   4.4e-13   49.5   0.0     2   109   204   316   203   344 0.78 Glycosyl transferases group 1
Glyco_transf_4       PF13439.1    177 sp|P71055|EPSF_BACSU -            384   1.4e-07   31.4   0.0   1   2   1.9e-10   4.7e-07   29.6   0.0     8   176    14   184     8   185 0.77 Glycosyltransferase Family 4
Glyco_trans_4_2      PF13477.1    139 sp|P71055|EPSF_BACSU -            384   2.7e-05   24.0   0.0   1   3   1.2e-05      0.03   14.1   0.0    10   135    21   150    14   154 0.71 Glycosyl transferase 4-like
PFK                  PF00365.15   282 sp|P71055|EPSF_BACSU -            384     0.078   11.9   0.0   1   1   5.8e-05      0.14   11.0   0.0    66   108   206   249   183   323 0.87 Phosphofructokinase
Glycos_transf_1      PF00534.15   172 sp|P71053|EPSD_BACSU -            381   9.9e-46  155.2   0.1   1   1   6.9e-49   1.3e-45  154.9   0.1     2   171   184   350   183   351 0.98 Glycosyl transferases group 1
Glyco_trans_4_2      PF13477.1    139 sp|P71053|EPSD_BACSU -            381   8.8e-19   67.7   0.1   1   1   7.4e-22   1.4e-18   67.0   0.1     1   136     4   143     4   146 0.77 Glycosyl transferase 4-like
Glyco_trans_1_4      PF13692.1    135 sp|P71053|EPSD_BACSU -            381   6.7e-18   65.1   0.0   1   1   6.9e-21   1.3e-17   64.2   0.0    15   134   210   336   197   337 0.86 Glycosyl transferases group 1
Glyco_trans_4_4      PF13579.1    160 sp|P71053|EPSD_BACSU -            381   3.1e-16   59.9   0.0   1   1   4.8e-19   8.9e-16   58.4   0.0    13   150    25   157    22   168 0.83 Glycosyl transferase 4-like domain
Glyco_trans_1_2      PF13524.1     92 sp|P71053|EPSD_BACSU -            381   2.2e-11   43.8   0.0   1   1   3.2e-14   5.8e-11   42.5   0.0     2    89   275   363   268   366 0.91 Glycosyl transferases group 1
Glyco_transf_4       PF13439.1    177 sp|P71053|EPSD_BACSU -            381     7e-08   32.3   0.0   1   1   6.2e-11   1.1e-07   31.6   0.0    25   138    26   137    23   177 0.84 Glycosyltransferase Family 4
ETF                  PF01012.16   164 sp|P71053|EPSD_BACSU -            381     0.017   14.8   0.2   2   2   0.00024      0.44   10.2   0.1    11    61   206   254   199   259 0.84 Electron transfer flavoprotein domain
PIGA                 PF08288.7     90 sp|P71053|EPSD_BACSU -            381     0.026   14.8   0.1   1   1   3.5e-05     0.065   13.5   0.0    33    85    61   114    41   118 0.85 PIGA (GPI anchor biosynthesis)
Glycos_transf_2      PF00535.21   169 sp|P71054|EPSE_BACSU -            278   7.5e-36  123.3   0.0   1   1   3.2e-39   9.5e-36  123.0   0.0     1   128     8   136     8   206 0.89 Glycosyl transferase family 2
Glyco_tranf_2_3      PF13641.1    228 sp|P71054|EPSE_BACSU -            278   1.5e-21   77.2   0.1   1   1     1e-23     3e-20   73.0   0.1     1   208     5   205     5   224 0.83 Glycosyltransferase like family 2
Glyco_tranf_2_2      PF10111.4    281 sp|P71054|EPSE_BACSU -            278   8.6e-06   25.0   0.4   1   2   2.2e-07   0.00065   18.8   0.0     1   113     8   111     8   121 0.82 Glycosyltransferase like family 2
Glyco_tranf_2_4      PF13704.1     97 sp|P71054|EPSE_BACSU -            278   0.00024   21.3   0.1   1   1   1.5e-07   0.00044   20.5   0.1     1    89    14   104    14   111 0.75 Glycosyl transferase family 2
Glyco_transf_7C      PF02709.9     78 sp|P71054|EPSE_BACSU -            278     0.014   14.8   0.3   1   1   1.4e-05     0.042   13.3   0.3    12    66   146   200   136   221 0.84 N-terminal domain of galactosyltransferase
Polysacc_synt_2      PF02719.10   294 sp|P71052|EPSC_BACSU -            598  5.4e-122  406.2   2.2   2   2  4.4e-125  5.4e-122  406.2   2.2     1   291   271   552   271   555 0.97 Polysaccharide biosynthesis protein
Epimerase            PF01370.16   236 sp|P71052|EPSC_BACSU -            598     2e-22   79.7   0.1   1   1   1.9e-24   2.4e-21   76.2   0.1     1   202   271   461   271   491 0.86 NAD dependent epimerase/dehydratase family
CoA_binding_3        PF13727.1    175 sp|P71052|EPSC_BACSU -            598   1.5e-17   64.0   0.1   1   1     2e-20   2.5e-17   63.2   0.1     4   175    52   226    50   226 0.92 CoA-binding domain
RmlD_sub_bind        PF04321.12   287 sp|P71052|EPSC_BACSU -            598     3e-16   59.1   0.1   1   1   7.6e-18   9.4e-15   54.2   0.1     2   157   270   441   269   518 0.87 RmlD substrate binding domain
adh_short            PF00106.20   167 sp|P71052|EPSC_BACSU -            598   1.8e-12   47.5   0.0   1   1   2.8e-15   3.5e-12   46.5   0.0     1   146   269   406   269   419 0.92 short chain dehydrogenase
3Beta_HSD            PF01073.14   280 sp|P71052|EPSC_BACSU -            598   1.1e-09   37.4   0.1   1   1   3.4e-12   4.3e-09   35.4   0.1     1   122   272   401   272   417 0.80 3-beta hydroxysteroid dehydrogenase/isomerase family
KR                   PF08659.5    181 sp|P71052|EPSC_BACSU -            598   4.7e-08   32.9   0.0   1   1   8.2e-11     1e-07   31.8   0.0     2   139   270   398   269   409 0.83 KR domain
Shikimate_DH         PF01488.15   135 sp|P71052|EPSC_BACSU -            598   1.7e-06   28.2   0.1   1   3   0.00032       0.4   10.7   0.0     9    35   125   151   118   159 0.81 Shikimate / quinate 5-dehydrogenase
Shikimate_DH         PF01488.15   135 sp|P71052|EPSC_BACSU -            598   1.7e-06   28.2   0.1   2   3   0.00031      0.39   10.8   0.1     6    59   262   320   258   386 0.78 Shikimate / quinate 5-dehydrogenase
NAD_binding_4        PF07993.7    249 sp|P71052|EPSC_BACSU -            598   3.4e-06   26.1   0.9   1   2   1.5e-06    0.0019   17.1   0.3     2   140   274   401   273   407 0.61 Male sterility protein
GFO_IDH_MocA         PF01408.17   120 sp|P71052|EPSC_BACSU -            598    0.0097   16.4   0.0   1   1   3.1e-05     0.038   14.5   0.0     2    76   130   207   129   222 0.81 Oxidoreductase family, NAD-binding Rossmann fold
Glycos_transf_2      PF00535.21   169 sp|P71057|EPSH_BACSU -            344   4.3e-40  137.1   0.3   1   1   2.7e-43   6.6e-40  136.5   0.3     1   166     7   170     7   173 0.95 Glycosyl transferase family 2
Glyco_tranf_2_3      PF13641.1    228 sp|P71057|EPSH_BACSU -            344   6.6e-17   62.0   0.0   1   1   3.6e-20   8.8e-17   61.6   0.0     1   202     4   204     3   240 0.82 Glycosyltransferase like family 2
Glyco_tranf_2_2      PF10111.4    281 sp|P71057|EPSH_BACSU -            344   2.7e-13   49.6   5.1   1   2   3.6e-16   8.9e-13   47.9   0.1     6   132    12   121     7   152 0.82 Glycosyltransferase like family 2
Glyco_tranf_2_4      PF13704.1     97 sp|P71057|EPSH_BACSU -            344   2.7e-05   24.3   0.1   1   2     2e-07   0.00051   20.3   0.1     2    94    14   106    13   123 0.83 Glycosyl transferase family 2
Glyco_transf_21      PF13506.1    175 sp|P71057|EPSH_BACSU -            344     0.015   14.6   0.0   1   1   1.1e-05     0.026   13.8   0.0    24    69    77   120    64   155 0.88 Glycosyl transferase family 21
PS_pyruv_trans       PF04230.8    286 sp|P71058|EPSI_BACSU -            358   2.5e-29  102.8   0.0   1   1   4.2e-33   6.2e-29  101.5   0.0     1   283    52   293    52   297 0.79 Polysaccharide pyruvyl transferase
Glycos_transf_2      PF00535.21   169 sp|P71059|EPSJ_BACSU -            344   5.7e-40  136.7   0.0   1   1   2.5e-43   9.4e-40  136.0   0.0     1   162     6   168     6   175 0.86 Glycosyl transferase family 2
Glyco_tranf_2_3      PF13641.1    228 sp|P71059|EPSJ_BACSU -            344   6.6e-15   55.5   0.0   1   2   4.3e-18   1.6e-14   54.2   0.0     3   215     5   218     3   223 0.76 Glycosyltransferase like family 2
Glyco_tranf_2_2      PF10111.4    281 sp|P71059|EPSJ_BACSU -            344   1.7e-12   47.0   0.0   1   2   1.4e-15   5.2e-12   45.4   0.0     1   140     6   129     6   171 0.91 Glycosyltransferase like family 2
Glyco_tranf_2_5      PF13712.1    217 sp|P71059|EPSJ_BACSU -            344      0.11   11.6   0.1   2   2   0.00024      0.87    8.7   0.0    37    90    64   116    48   124 0.84 Glycosyltransferase like family
Bac_transf           PF02397.11   187 sp|P71062|EPSL_BACSU -            202   7.4e-66  220.8   0.0   1   1   5.9e-70   8.7e-66  220.6   0.0     1   185     4   182     4   184 0.91 Bacterial sugar transferase
Hexapep              PF00132.19    36 sp|P71063|EPSM_BACSU -            216   1.6e-12   46.3  16.0   1   3   1.6e-11   1.2e-07   30.9   4.5     2    33   103   134   102   137 0.96 Bacterial transferase hexapeptide (six repeats)
Hexapep              PF00132.19    36 sp|P71063|EPSM_BACSU -            216   1.6e-12   46.3  16.0   3   3   1.1e-07    0.0008   18.8   3.4     3    34   158   189   156   191 0.91 Bacterial transferase hexapeptide (six repeats)
DegT_DnrJ_EryC1      PF01041.12   363 sp|Q795J3|EPSN_BACSU -            388   8.9e-97  324.3   0.0   1   1  4.7e-100     1e-96  324.1   0.0     5   362    14   371    10   372 0.94 DegT/DnrJ/EryC1/StrS aminotransferase family
Beta_elim_lyase      PF01212.16   290 sp|Q795J3|EPSN_BACSU -            388   4.6e-10   39.1   0.0   1   1     4e-13   8.4e-10   38.2   0.0    29   271    34   273    32   289 0.78 Beta-eliminating lyase
Aminotran_1_2        PF00155.16   363 sp|Q795J3|EPSN_BACSU -            388   1.2e-07   30.9   0.0   1   1   8.7e-11   1.8e-07   30.4   0.0    46   189    36   163    13   172 0.91 Aminotransferase class I and II
SLA_LP_auto_ag       PF05889.8    389 sp|Q795J3|EPSN_BACSU -            388   0.00026   19.5   0.0   1   1   1.9e-07    0.0004   18.9   0.0   132   244   103   210    32   231 0.71 Soluble liver antigen/liver pancreas antigen (SLA/LP autoantigen)
Cys_Met_Meta_PP      PF01053.15   386 sp|Q795J3|EPSN_BACSU -            388     0.002   16.5   0.1   1   2     2e-06    0.0042   15.4   0.0    55   109    34    89    32   123 0.87 Cys/Met metabolism PLP-dependent enzyme
Aminotran_5          PF00266.14   371 sp|Q795J3|EPSN_BACSU -            388    0.0072   15.0   0.0   1   1   6.3e-06     0.013   14.2   0.0    47   336    38   316    30   324 0.72 Aminotransferase class-V
Pyridoxal_deC        PF00282.14   373 sp|Q795J3|EPSN_BACSU -            388     0.018   13.5   0.0   1   1   1.2e-05     0.025   13.0   0.0   173   233   107   164    95   220 0.87 Pyridoxal-dependent decarboxylase conserved domain
PS_pyruv_trans       PF04230.8    286 sp|P71065|EPSO_BACSU -            322   9.8e-28   97.6   0.1   1   1   8.1e-32   1.2e-27   97.3   0.1     1   285    37   288    37   289 0.77 Polysaccharide pyruvyl transferase
MMR_HSR1             PF01926.18   116 sp|P42182|ERA_BACSU  -            301   2.8e-24   85.3   0.2   1   1   4.2e-27   4.8e-24   84.5   0.2     2   116    11   125    10   125 0.89 50S ribosome-binding GTPase
KH_2                 PF07650.12    78 sp|P42182|ERA_BACSU  -            301   2.2e-21   75.1   1.3   1   1   4.5e-24   5.1e-21   74.0   1.3     1    78   208   285   208   285 0.95 KH domain
GTP_EFTU             PF00009.22   188 sp|P42182|ERA_BACSU  -            301   5.7e-15   55.2   0.0   1   1   2.8e-16   3.2e-13   49.5   0.0     8   187    13   173     9   174 0.74 Elongation factor Tu GTP binding domain
FeoB_N               PF02421.13   156 sp|P42182|ERA_BACSU  -            301   1.3e-12   47.2   0.1   1   1   1.8e-15     2e-12   46.6   0.1     3   156    11   168    10   168 0.87 Ferrous iron transport protein B
Dynamin_N            PF00350.18   168 sp|P42182|ERA_BACSU  -            301   4.2e-11   42.9   0.3   1   2   4.1e-07   0.00047   20.0   0.1     1    34    11    44    11    58 0.87 Dynamin family
Dynamin_N            PF00350.18   168 sp|P42182|ERA_BACSU  -            301   4.2e-11   42.9   0.3   2   2   1.8e-07   0.00021   21.1   0.0   102   167    57   125    47   126 0.83 Dynamin family
Miro                 PF08477.8    119 sp|P42182|ERA_BACSU  -            301   2.2e-07   31.3   0.4   1   1   6.7e-10   7.7e-07   29.6   0.1     2   119    11   127    11   127 0.74 Miro-like protein
PduV-EutP            PF10662.4    143 sp|P42182|ERA_BACSU  -            301   8.1e-07   28.6   0.1   1   1   1.8e-09     2e-06   27.3   0.1     6   142    13   169     9   170 0.75 Ethanolamine utilisation - propanediol utilisation
AIG1                 PF04548.11   212 sp|P42182|ERA_BACSU  -            301   1.9e-05   23.8   0.2   1   1   2.9e-08   3.3e-05   23.1   0.2     5   110    13   115    11   120 0.81 AIG1 family
DUF258               PF03193.11   161 sp|P42182|ERA_BACSU  -            301   0.00021   20.5   0.4   1   1   3.2e-07   0.00037   19.7   0.4    33   103     6    72     2    89 0.77 Protein of unknown function, DUF258
AAA_22               PF13401.1    131 sp|P42182|ERA_BACSU  -            301    0.0024   18.0   0.0   1   1   4.4e-06     0.005   16.9   0.0     4   109     8   138     3   166 0.77 AAA domain
Ras                  PF00071.17   162 sp|P42182|ERA_BACSU  -            301    0.0028   17.0   0.0   1   1   4.7e-06    0.0054   16.1   0.0     4   155    13   167    11   173 0.74 Ras family
KH_1                 PF00013.24    60 sp|P42182|ERA_BACSU  -            301     0.049   13.2   0.2   1   1   0.00012      0.14   11.8   0.2     3    33   233   264   231   272 0.82 KH domain
Lipase_2             PF01674.13   219 sp|P37957|ESTA_BACSU -            212   1.7e-12   47.1   0.2   1   1   2.8e-15   3.7e-12   46.0   0.1     2   103    35   128    34   141 0.85 Lipase (class 2)
Abhydrolase_6        PF12697.2    228 sp|P37957|ESTA_BACSU -            212   1.7e-09   37.8   0.0   1   1   2.6e-12   3.5e-09   36.9   0.0     1   103    37   139    37   179 0.78 Alpha/beta hydrolase family
Abhydrolase_1        PF00561.15   230 sp|P37957|ESTA_BACSU -            212   2.4e-07   30.5   0.0   1   1   2.2e-10   2.9e-07   30.2   0.0    29    92    85   168    60   202 0.80 alpha/beta hydrolase fold
Abhydrolase_5        PF12695.2    145 sp|P37957|ESTA_BACSU -            212   8.1e-07   28.8   0.2   1   1   7.8e-10     1e-06   28.5   0.2     1   118    36   167    36   188 0.77 Alpha/beta hydrolase family
PGAP1                PF07819.8    225 sp|P37957|ESTA_BACSU -            212   1.9e-05   24.3   0.1   1   1   4.3e-08   5.9e-05   22.7   0.1     4   120    34   134    31   141 0.84 PGAP1-like protein
DUF915               PF06028.6    255 sp|P37957|ESTA_BACSU -            212   3.7e-05   22.9   0.3   2   2   3.4e-06    0.0046   16.0   0.2    77   141    75   135    68   144 0.74 Alpha/beta hydrolase of unknown function (DUF915)
LCAT                 PF02450.10   389 sp|P37957|ESTA_BACSU -            212   0.00012   21.1   0.0   1   1   1.2e-07   0.00016   20.7   0.0    72   140    55   121    43   137 0.75 Lecithin:cholesterol acyltransferase
DUF900               PF05990.7    234 sp|P37957|ESTA_BACSU -            212    0.0003   20.2   0.0   1   1   2.6e-07   0.00036   19.9   0.0    68   119    73   125    28   168 0.86 Alpha/beta hydrolase of unknown function (DUF900)
DUF676               PF05057.9    219 sp|P37957|ESTA_BACSU -            212    0.0024   17.1   0.1   1   1     5e-06    0.0067   15.7   0.1     8    98    37   119    31   133 0.78 Putative serine esterase (DUF676)
ADH_zinc_N           PF00107.21   130 sp|P37957|ESTA_BACSU -            212     0.029   13.9   0.0   1   1   3.7e-05      0.05   13.1   0.0    41    95    80   137    66   160 0.85 Zinc-binding dehydrogenase
Ser_hydrolase        PF06821.8    171 sp|P37957|ESTA_BACSU -            212      0.11   12.0   0.0   1   1   0.00014      0.19   11.3   0.0    35    92    82   138    60   190 0.79 Serine hydrolase
Lipase_2             PF01674.13   219 sp|Q79F14|ESTB_BACSU -            210   6.9e-14   51.6   0.6   1   1     7e-17     1e-13   51.1   0.2     2   102    33   125    32   140 0.87 Lipase (class 2)
Abhydrolase_6        PF12697.2    228 sp|Q79F14|ESTB_BACSU -            210     1e-08   35.3   0.0   1   1   7.9e-12   1.2e-08   35.1   0.0     1   102    35   136    35   181 0.78 Alpha/beta hydrolase family
Abhydrolase_1        PF00561.15   230 sp|Q79F14|ESTB_BACSU -            210   1.9e-07   30.8   0.0   1   1   1.5e-10   2.2e-07   30.6   0.0    25    87    79   140    39   190 0.85 alpha/beta hydrolase fold
LCAT                 PF02450.10   389 sp|Q79F14|ESTB_BACSU -            210     7e-06   25.2   0.1   1   1   6.4e-09   9.5e-06   24.8   0.1    66   140    47   119    37   137 0.80 Lecithin:cholesterol acyltransferase
Abhydrolase_5        PF12695.2    145 sp|Q79F14|ESTB_BACSU -            210   3.2e-05   23.6   0.0   1   1   2.8e-08   4.1e-05   23.3   0.0     1   118    34   165    34   182 0.69 Alpha/beta hydrolase family
DUF676               PF05057.9    219 sp|Q79F14|ESTB_BACSU -            210   3.5e-05   23.1   0.0   1   1   4.4e-08   6.5e-05   22.3   0.0     8   100    35   119    29   131 0.80 Putative serine esterase (DUF676)
DUF900               PF05990.7    234 sp|Q79F14|ESTB_BACSU -            210   4.8e-05   22.8   0.0   1   1   4.3e-08   6.4e-05   22.3   0.0    48   116    51   120    29   137 0.82 Alpha/beta hydrolase of unknown function (DUF900)
PGAP1                PF07819.8    225 sp|Q79F14|ESTB_BACSU -            210   0.00014   21.4   0.6   1   1   1.3e-06    0.0019   17.8   0.6     5   120    33   132    29   142 0.71 PGAP1-like protein
DUF915               PF06028.6    255 sp|Q79F14|ESTB_BACSU -            210   0.00022   20.3   1.2   2   2   4.2e-06    0.0062   15.6   0.8    73   141    69   133    61   142 0.74 Alpha/beta hydrolase of unknown function (DUF915)
Ser_hydrolase        PF06821.8    171 sp|Q79F14|ESTB_BACSU -            210     0.027   14.0   0.0   1   1   3.2e-05     0.047   13.2   0.0    35   153    80   186    57   194 0.68 Serine hydrolase
Abhydrolase_6        PF12697.2    228 sp|O32232|EST_BACSU  -            246     4e-19   69.4   0.0   1   1   3.2e-22   4.8e-19   69.1   0.0     1   225    18   232    18   235 0.82 Alpha/beta hydrolase family
Abhydrolase_5        PF12695.2    145 sp|O32232|EST_BACSU  -            246   7.9e-17   61.3   0.0   1   1   6.5e-20   9.6e-17   61.0   0.0     1   144    17   222    17   223 0.84 Alpha/beta hydrolase family
DLH                  PF01738.13   218 sp|O32232|EST_BACSU  -            246   6.1e-09   35.4   0.4   1   3   1.7e-06    0.0025   17.1   0.0    14   127    15   113     3   160 0.77 Dienelactone hydrolase family
DLH                  PF01738.13   218 sp|O32232|EST_BACSU  -            246   6.1e-09   35.4   0.4   3   3   1.5e-05     0.022   14.0   0.1   141   196   177   230   171   240 0.88 Dienelactone hydrolase family
DUF2048              PF09752.4    348 sp|O32232|EST_BACSU  -            246   1.1e-06   27.7   0.2   1   1   9.8e-09   1.5e-05   24.1   0.2   168   347    78   242    72   243 0.66 Uncharacterized conserved protein (DUF2048)
Peptidase_S9         PF00326.16   213 sp|O32232|EST_BACSU  -            246   3.9e-06   26.2   0.6   2   2   3.5e-07   0.00052   19.2   0.3   136   208   171   243   121   244 0.76 Prolyl oligopeptidase family
Hydrolase_4          PF12146.3     79 sp|O32232|EST_BACSU  -            246   6.6e-05   22.6   0.0   1   1   9.5e-08   0.00014   21.6   0.0    16    63    15    62     5    79 0.86 Putative lysophospholipase
BAAT_C               PF08840.6    213 sp|O32232|EST_BACSU  -            246   0.00012   21.8   0.0   1   1   1.2e-07   0.00017   21.3   0.0     9   165    75   226    72   229 0.69 BAAT / Acyl-CoA thioester hydrolase C terminal
UPF0227              PF05728.7    187 sp|O32232|EST_BACSU  -            246     0.014   15.1   0.1   1   1   2.6e-05     0.038   13.7   0.1    56   173    82   196    66   209 0.63 Uncharacterised protein family (UPF0227)
ABC_tran_2           PF12848.2     85 sp|O32232|EST_BACSU  -            246     0.027   14.3   0.1   1   1   3.4e-05     0.051   13.4   0.1     4    53   126   176   124   192 0.86 ABC transporter
Abhydrolase_1        PF00561.15   230 sp|O32232|EST_BACSU  -            246     0.055   13.0   0.3   1   1   8.8e-05      0.13   11.7   0.0   121   219   126   227   119   235 0.72 alpha/beta hydrolase fold
ETF                  PF01012.16   164 sp|P94551|ETFA_BACSU -            325   2.2e-42  144.5   0.5   1   2     9e-46   4.5e-42  143.5   0.0     2   162     5   160     4   162 0.97 Electron transfer flavoprotein domain
ETF_alpha            PF00766.14    86 sp|P94551|ETFA_BACSU -            325   9.3e-37  124.5   0.5   1   1   4.1e-40     2e-36  123.4   0.5     2    86   198   282   197   282 0.99 Electron transfer flavoprotein FAD-binding domain
TPP_enzyme_M         PF00205.17   137 sp|P94551|ETFA_BACSU -            325    0.0086   15.8   0.3   1   1   4.1e-06      0.02   14.6   0.3     3   133   193   310   191   314 0.69 Thiamine pyrophosphate enzyme, central domain
ETF                  PF01012.16   164 sp|P94550|ETFB_BACSU -            257   1.2e-38  132.4   0.1   1   1   1.2e-42   1.7e-38  131.9   0.1     7   164    26   183    21   183 0.95 Electron transfer flavoprotein domain
Exonuc_VII_L         PF02601.10   319 sp|P54521|EX7L_BACSU -            448   1.3e-90  303.8   2.9   1   1   4.4e-94   1.6e-90  303.5   2.9     1   318   125   439   125   440 0.95 Exonuclease VII, large subunit
tRNA_anti_2          PF13742.1     99 sp|P54521|EX7L_BACSU -            448   6.4e-31  106.1   0.0   1   1   3.8e-34   1.4e-30  105.0   0.0     2    99     7   103     6   103 0.98 OB-fold nucleic acid binding domain
tRNA_anti-codon      PF01336.20    75 sp|P54521|EX7L_BACSU -            448   2.9e-08   33.4   0.0   1   1   1.8e-11   6.5e-08   32.3   0.0     1    73    29   102    29   104 0.93 OB-fold nucleic acid binding domain
Baculo_PEP_C         PF04513.7    140 sp|P54521|EX7L_BACSU -            448      0.33   10.7   3.5   2   2   8.3e-05      0.31   10.8   1.8    31    98   324   389   316   400 0.88 Baculovirus polyhedron envelope protein, PEP, C terminus
Exonuc_VII_S         PF02609.11    53 sp|P54522|EX7S_BACSU -             84   1.2e-20   72.9   0.9   1   1     1e-24   1.5e-20   72.6   0.9     1    51    12    62    12    64 0.98 Exonuclease VII small subunit
Exo_endo_phos        PF03372.18   249 sp|P37454|EXOA_BACSU -            252   1.3e-29  103.8   0.1   1   1   3.1e-33   1.5e-29  103.6   0.1     2   249     5   243     4   243 0.69 Endonuclease/Exonuclease/phosphatase family
Exo_endo_phos_2      PF14529.1    119 sp|P37454|EXOA_BACSU -            252   4.5e-13   48.8   0.0   1   1   1.3e-16   6.6e-13   48.3   0.0     2   118   101   246   100   247 0.80 Endonuclease-reverse transcriptase
Peptidase_S7         PF00949.16   132 sp|P37454|EXOA_BACSU -            252     0.095   12.1   0.0   1   1     3e-05      0.15   11.4   0.0    90   121    55    86    23    95 0.86 Peptidase S7, Flavivirus NS3 serine protease
ABC_tran             PF00005.22   137 sp|P39115|EXPZ_BACSU -            547   3.7e-46  156.8   4.6   1   3   1.5e-13     4e-11   43.3   0.1     2    60    21    77    20    95 0.78 ABC transporter
ABC_tran             PF00005.22   137 sp|P39115|EXPZ_BACSU -            547   3.7e-46  156.8   4.6   2   3   2.7e-08   7.3e-06   26.3   0.0   104   137    99   132    71   132 0.81 ABC transporter
ABC_tran             PF00005.22   137 sp|P39115|EXPZ_BACSU -            547   3.7e-46  156.8   4.6   3   3   6.9e-27   1.9e-24   86.5   0.0     2   137   308   435   307   435 0.84 ABC transporter
AAA_21               PF13304.1    303 sp|P39115|EXPZ_BACSU -            547   1.9e-24   87.1  10.6   1   4   5.2e-05     0.014   15.3   0.7     2    19    33    50    32    57 0.89 AAA domain
AAA_21               PF13304.1    303 sp|P39115|EXPZ_BACSU -            547   1.9e-24   87.1  10.6   2   4     2e-09   5.4e-07   29.8   0.1   232   303    99   164    56   164 0.85 AAA domain
AAA_21               PF13304.1    303 sp|P39115|EXPZ_BACSU -            547   1.9e-24   87.1  10.6   3   4   3.5e-07   9.4e-05   22.5   0.0     3    21   321   339   320   382 0.68 AAA domain
AAA_21               PF13304.1    303 sp|P39115|EXPZ_BACSU -            547   1.9e-24   87.1  10.6   4   4     2e-07   5.4e-05   23.3   0.1   233   303   403   467   401   467 0.94 AAA domain
SMC_N                PF02463.14   220 sp|P39115|EXPZ_BACSU -            547   6.3e-12   45.1   2.9   1   4   0.00016     0.042   13.0   0.1    25    70    31    74    13    84 0.80 RecF/RecN/SMC N terminal domain
SMC_N                PF02463.14   220 sp|P39115|EXPZ_BACSU -            547   6.3e-12   45.1   2.9   2   4   0.00021     0.058   12.6   0.0   104   207    71   168    64   178 0.78 RecF/RecN/SMC N terminal domain
SMC_N                PF02463.14   220 sp|P39115|EXPZ_BACSU -            547   6.3e-12   45.1   2.9   3   4   5.2e-05     0.014   14.6   0.1    24    50   317   340   294   345 0.77 RecF/RecN/SMC N terminal domain
AAA_22               PF13401.1    131 sp|P39115|EXPZ_BACSU -            547   7.3e-11   42.3   1.2   1   2   4.1e-07   0.00011   22.3   0.1     4   123    30   157    27   162 0.78 AAA domain
AAA_22               PF13401.1    131 sp|P39115|EXPZ_BACSU -            547   7.3e-11   42.3   1.2   2   2   1.3e-05    0.0036   17.4   0.1     7   115   320   455   314   485 0.67 AAA domain
AAA_29               PF13555.1     62 sp|P39115|EXPZ_BACSU -            547   6.7e-10   38.3   0.3   1   2   1.6e-05    0.0043   16.5   0.0    17    41    25    48    15    62 0.75 P-loop containing region of AAA domain
AAA_29               PF13555.1     62 sp|P39115|EXPZ_BACSU -            547   6.7e-10   38.3   0.3   2   2     2e-06   0.00054   19.4   0.1    12    40   307   334   304   339 0.84 P-loop containing region of AAA domain
ABC_tran_2           PF12848.2     85 sp|P39115|EXPZ_BACSU -            547   1.1e-08   34.8  25.4   1   1   4.2e-11   1.1e-08   34.7  18.8     1    68   171   260   171   279 0.75 ABC transporter
DUF258               PF03193.11   161 sp|P39115|EXPZ_BACSU -            547   1.5e-08   33.9   0.2   1   2   1.8e-05    0.0048   16.1   0.1    16    67    10    62     2    79 0.84 Protein of unknown function, DUF258
DUF258               PF03193.11   161 sp|P39115|EXPZ_BACSU -            547   1.5e-08   33.9   0.2   2   2   3.2e-05    0.0085   15.2   0.0    22    62   303   344   284   430 0.84 Protein of unknown function, DUF258
AAA_15               PF13175.1    415 sp|P39115|EXPZ_BACSU -            547   1.9e-07   30.5  19.3   1   5   0.00015      0.04   12.9   0.0    13    42    21    50     6    90 0.78 AAA ATPase domain
AAA_15               PF13175.1    415 sp|P39115|EXPZ_BACSU -            547   1.9e-07   30.5  19.3   4   5   0.00038       0.1   11.6   0.0    12    42   307   337   296   385 0.75 AAA ATPase domain
Miro                 PF08477.8    119 sp|P39115|EXPZ_BACSU -            547     2e-07   31.5   0.9   1   2   0.00014     0.037   14.5   0.0     2    66    33   113    33   158 0.63 Miro-like protein
Miro                 PF08477.8    119 sp|P39115|EXPZ_BACSU -            547     2e-07   31.5   0.9   2   2   0.00019      0.05   14.0   0.0     1    25   319   343   319   430 0.78 Miro-like protein
AAA_10               PF12846.2    304 sp|P39115|EXPZ_BACSU -            547   8.4e-07   28.7   0.1   1   2    0.0016      0.44    9.9   0.0     6    33    35    62    32    79 0.85 AAA-like domain
AAA_10               PF12846.2    304 sp|P39115|EXPZ_BACSU -            547   8.4e-07   28.7   0.1   2   2   3.6e-05    0.0097   15.3   0.0     4    29   320   345   318   364 0.88 AAA-like domain
AAA_16               PF13191.1    185 sp|P39115|EXPZ_BACSU -            547   8.5e-07   29.1   2.8   1   2   3.1e-05    0.0084   16.1   0.1    18   119    24   125    17   180 0.52 AAA ATPase domain
AAA_16               PF13191.1    185 sp|P39115|EXPZ_BACSU -            547   8.5e-07   29.1   2.8   2   2   0.00058      0.16   11.9   0.0    22    45   315   338   304   389 0.78 AAA ATPase domain
AAA_30               PF13604.1    196 sp|P39115|EXPZ_BACSU -            547   1.3e-06   28.0   0.1   1   2   7.9e-05     0.021   14.3   0.0    14   130    27   159    17   166 0.72 AAA domain
AAA_30               PF13604.1    196 sp|P39115|EXPZ_BACSU -            547   1.3e-06   28.0   0.1   2   2    0.0026       0.7    9.4   0.1    16    46   316   345   309   451 0.60 AAA domain
MMR_HSR1             PF01926.18   116 sp|P39115|EXPZ_BACSU -            547   1.4e-06   28.2   1.5   1   2   0.00052      0.14   12.1   0.1     2    56    33   131    32   197 0.57 50S ribosome-binding GTPase
MMR_HSR1             PF01926.18   116 sp|P39115|EXPZ_BACSU -            547   1.4e-06   28.2   1.5   2   2   9.2e-05     0.025   14.5   0.1     1    28   319   346   319   536 0.76 50S ribosome-binding GTPase
AAA_23               PF13476.1    202 sp|P39115|EXPZ_BACSU -            547   1.8e-06   28.4  26.3   1   4   6.7e-05     0.018   15.3   0.1    20    39    31    50    12    52 0.83 AAA domain
AAA_23               PF13476.1    202 sp|P39115|EXPZ_BACSU -            547   1.8e-06   28.4  26.3   3   4   2.2e-06    0.0006   20.1   0.4    10    39   307   337   292   346 0.83 AAA domain
T2SE                 PF00437.15   272 sp|P39115|EXPZ_BACSU -            547   2.3e-06   26.7   1.3   1   2    0.0012      0.34    9.7   0.1   111   158    13    60     2    66 0.80 Type II/IV secretion system protein
T2SE                 PF00437.15   272 sp|P39115|EXPZ_BACSU -            547   2.3e-06   26.7   1.3   2   2   2.2e-05     0.006   15.5   0.1    69   151   249   340   201   348 0.59 Type II/IV secretion system protein
AAA_14               PF13173.1    128 sp|P39115|EXPZ_BACSU -            547   2.6e-06   27.3   1.0   1   2    0.0016      0.43   10.4   0.1     2   101    30   162    29   175 0.52 AAA domain
AAA_14               PF13173.1    128 sp|P39115|EXPZ_BACSU -            547   2.6e-06   27.3   1.0   2   2   0.00023     0.062   13.1   0.1     3    42   318   365   316   475 0.83 AAA domain
NACHT                PF05729.7    166 sp|P39115|EXPZ_BACSU -            547   3.1e-06   26.9   0.3   1   2   0.00036     0.097   12.3   0.0     3    27    33    57    31    78 0.86 NACHT domain
NACHT                PF05729.7    166 sp|P39115|EXPZ_BACSU -            547   3.1e-06   26.9   0.3   2   2   0.00043      0.12   12.0   0.1     3    20   320   337   318   346 0.87 NACHT domain
NB-ARC               PF00931.17   287 sp|P39115|EXPZ_BACSU -            547     7e-06   25.1   0.3   1   2   0.00013     0.036   12.9   0.0     9    46    20    58    13   160 0.76 NB-ARC domain
NB-ARC               PF00931.17   287 sp|P39115|EXPZ_BACSU -            547     7e-06   25.1   0.3   2   2    0.0017      0.45    9.3   0.1    22    58   320   352   305   438 0.69 NB-ARC domain
AAA_17               PF13207.1    121 sp|P39115|EXPZ_BACSU -            547     9e-06   26.5   4.6   2   2   0.00012     0.032   15.0   0.0     1    18   319   336   319   381 0.90 AAA domain
AAA_33               PF13671.1    143 sp|P39115|EXPZ_BACSU -            547   1.2e-05   25.2   0.0   1   2    0.0011      0.29   11.0   0.0     4    33    35    87    32   232 0.73 AAA domain
AAA_33               PF13671.1    143 sp|P39115|EXPZ_BACSU -            547   1.2e-05   25.2   0.0   2   2   0.00099      0.27   11.1   0.0     2    24   320   342   320   394 0.79 AAA domain
MobB                 PF03205.9    140 sp|P39115|EXPZ_BACSU -            547   2.2e-05   24.1   1.7   2   2   0.00018     0.048   13.3   0.1     3    23   320   340   318   350 0.85 Molybdopterin guanine dinucleotide synthesis protein B
AAA_28               PF13521.1    163 sp|P39115|EXPZ_BACSU -            547   2.2e-05   24.4   1.2   2   2     3e-05    0.0082   16.1   0.0     1    41   319   364   319   394 0.75 AAA domain
Zeta_toxin           PF06414.7    201 sp|P39115|EXPZ_BACSU -            547   2.7e-05   23.3   0.1   1   2   0.00039       0.1   11.6   0.0    14    46    28    62    16    66 0.78 Zeta toxin
Zeta_toxin           PF06414.7    201 sp|P39115|EXPZ_BACSU -            547   2.7e-05   23.3   0.1   2   2    0.0026      0.71    8.9   0.0     2    46   304   347   303   352 0.77 Zeta toxin
SbcCD_C              PF13558.1     90 sp|P39115|EXPZ_BACSU -            547   3.4e-05   23.6   0.2   1   2   9.2e-05     0.025   14.5   0.1    27    88    98   146    76   148 0.81 Putative exonuclease SbcCD, C subunit
ATP-synt_ab          PF00006.20   215 sp|P39115|EXPZ_BACSU -            547   7.4e-05   22.3   0.0   2   2   0.00014     0.038   13.4   0.0     9    49   311   355   301   543 0.75 ATP synthase alpha/beta family, nucleotide-binding domain
cobW                 PF02492.14   178 sp|P39115|EXPZ_BACSU -            547   9.6e-05   21.8   1.2   2   2   0.00022     0.059   12.8   0.1     4    25   321   342   319   349 0.80 CobW/HypB/UreG, nucleotide-binding domain
AAA_19               PF13245.1     76 sp|P39115|EXPZ_BACSU -            547   0.00024   20.7   0.0   2   2   0.00013     0.034   13.8   0.0     8    33   315   339   310   370 0.81 Part of AAA domain
AAA_18               PF13238.1    129 sp|P39115|EXPZ_BACSU -            547   0.00025   21.3  10.5   1   2   0.00019     0.051   13.8   0.4     1    69    33   118    33   171 0.60 AAA domain
AAA_18               PF13238.1    129 sp|P39115|EXPZ_BACSU -            547   0.00025   21.3  10.5   2   2   0.00092      0.25   11.6   0.1     1    30   320   353   320   447 0.60 AAA domain
Arch_ATPase          PF01637.13   234 sp|P39115|EXPZ_BACSU -            547    0.0004   20.1   6.7   2   2   0.00037     0.099   12.3   0.0    24    68   321   378   314   466 0.55 Archaeal ATPase
AAA_25               PF13481.1    194 sp|P39115|EXPZ_BACSU -            547   0.00041   19.8   0.4   2   2    0.0023      0.62    9.4   0.0    31    63   315   348   300   438 0.65 AAA domain
KAP_NTPase           PF07693.9    325 sp|P39115|EXPZ_BACSU -            547     0.001   18.1   1.3   1   2   0.00025     0.066   12.1   0.0    15    64    25   247    16   290 0.68 KAP family P-loop domain
Dynamin_N            PF00350.18   168 sp|P39115|EXPZ_BACSU -            547    0.0017   18.2   8.3   2   2   0.00027     0.074   12.8   0.0     1    78   320   403   320   475 0.65 Dynamin family
Sigma54_activat      PF00158.21   168 sp|P39115|EXPZ_BACSU -            547    0.0019   17.7   0.1   1   2    0.0031      0.84    9.0   0.0     9    53    17    61    10    79 0.81 Sigma-54 interaction domain
FtsK_SpoIIIE         PF01580.13   205 sp|P39115|EXPZ_BACSU -            547    0.0026   17.2   0.2   2   2    0.0026      0.69    9.3   0.1    31    58   310   337   286   340 0.77 FtsK/SpoIIIE family
PduV-EutP            PF10662.4    143 sp|P39115|EXPZ_BACSU -            547    0.0039   16.6   0.3   2   2    0.0018      0.48    9.9   0.1     2    26   318   342   317   346 0.89 Ethanolamine utilisation - propanediol utilisation
ArgK                 PF03308.11   267 sp|P39115|EXPZ_BACSU -            547    0.0084   14.9   0.0   1   2   3.1e-05    0.0084   14.9   0.0     4    53     4    54     1    62 0.84 ArgK protein
PRK                  PF00485.13   194 sp|P39115|EXPZ_BACSU -            547     0.012   15.2   0.7   1   1    0.0029      0.77    9.2   0.0     1    29    32    60    32   112 0.71 Phosphoribulokinase / Uridine kinase family
DUF4488              PF14869.1    133 sp|P39115|EXPZ_BACSU -            547     0.017   14.6   0.4   1   1   0.00022     0.059   12.9   0.1    68   123   480   539   449   545 0.82 Domain of unknown function (DUF4488)
AAA_24               PF13479.1    213 sp|P39115|EXPZ_BACSU -            547     0.032   13.8   3.9   2   2    0.0016      0.44   10.0   0.0     5    21   319   335   315   342 0.88 AAA domain
SRPRB                PF09439.5    181 sp|P39115|EXPZ_BACSU -            547      0.06   12.5   4.0   2   2    0.0014      0.37   10.0   0.0     4    40   318   354   315   382 0.78 Signal recognition particle receptor beta subunit
IstB_IS21            PF01695.12   178 sp|P39115|EXPZ_BACSU -            547     0.063   12.6   1.1   1   1    0.0037      0.99    8.7   0.1    44    72   314   343   296   350 0.77 IstB-like ATP binding protein
Peptidase_M23        PF01551.17    96 sp|P39115|EXPZ_BACSU -            547     0.063   13.3   0.5   1   1    0.0015       0.4   10.7   0.1    57    85    21    49     7    60 0.78 Peptidase family M23
DEAD                 PF00270.24   169 sp|P39115|EXPZ_BACSU -            547      0.15   11.5   2.8   1   1    0.0015      0.41   10.1   0.1    11    56   314   355   308   460 0.71 DEAD/DEAH box helicase
PDDEXK_1             PF12705.2    257 sp|P39115|EXPZ_BACSU -            547      0.39   10.0   4.5   1   1   0.00051      0.14   11.5   1.3    53   130   196   285   139   295 0.82 PD-(D/E)XK nuclease superfamily
MFS_1                PF07690.11   352 sp|O34456|EXUT_BACSU -            422   2.2e-60  204.2  67.5   1   2   3.8e-61   9.4e-58  195.5  43.0     1   352    13   369    13   369 0.88 Major Facilitator Superfamily
MFS_1                PF07690.11   352 sp|O34456|EXUT_BACSU -            422   2.2e-60  204.2  67.5   2   2   1.5e-08   3.8e-05   22.5  16.6    59   172   290   404   290   420 0.76 Major Facilitator Superfamily
Sugar_tr             PF00083.19   451 sp|O34456|EXUT_BACSU -            422   1.4e-10   40.3  43.6   1   1   9.8e-13   2.4e-09   36.2  43.6    44   436    41   404     8   412 0.79 Sugar (and other) transporter
ATG22                PF11700.3    477 sp|O34456|EXUT_BACSU -            422   9.1e-07   27.7  25.2   2   2   3.7e-10   9.1e-07   27.7  25.2   206   460   151   396   132   407 0.79 Vacuole effluxer Atg22 like
OAD_gamma            PF04277.8     79 sp|O34456|EXUT_BACSU -            422      0.09   13.1   1.4   1   2   0.00018      0.44   10.9   0.3    16    56   164   205   150   217 0.75 Oxaloacetate decarboxylase, gamma chain
DUF2484              PF10658.4     77 sp|O34456|EXUT_BACSU -            422      0.13   12.4   0.4   3   3   5.1e-05      0.13   12.4   0.4    36    66   366   396   358   405 0.90 Protein of unknown function (DUF2484)
EzrA                 PF06160.7    560 sp|O34894|EZRA_BACSU -            562  3.4e-178  593.3  45.5   1   1    2e-181  3.8e-178  593.1  45.5     1   558     3   560     3   562 0.99 Septation ring formation regulator, EzrA
FUSC                 PF04632.7    650 sp|O34894|EZRA_BACSU -            562     0.064   11.6   4.6   2   2   1.1e-05      0.02   13.3   1.4   160   297   350   493   342   545 0.76 Fusaric acid resistance protein family
TMPIT                PF07851.8    330 sp|O34894|EZRA_BACSU -            562      0.49    9.4  23.2   4   4     8e-06     0.015   14.3   5.5     3    87   381   466   379   530 0.92 TMPIT-like protein
Cob_adeno_trans      PF01923.13   163 sp|O34894|EZRA_BACSU -            562      0.99    9.1  21.5   5   5   0.00038      0.71    9.6   2.1    52   151   416   511   399   523 0.73 Cobalamin adenosyltransferase
FBPase_2             PF06874.6    641 sp|Q45597|F16PC_BACSU -            641         0 1031.9  12.6   1   1         0         0 1031.7  12.6     2   638     4   638     3   641 0.99 Firmicute fructose-1,6-bisphosphatase
Acyl_transf_1        PF00698.16   318 sp|P71019|FABD_BACSU -            317   2.2e-46  158.6   0.0   1   1   3.5e-50   2.6e-46  158.4   0.0     2   281     6   290     5   316 0.86 Acyl transferase domain
Lyase_catalyt        PF09093.6    373 sp|P71019|FABD_BACSU -            317      0.16   10.8   0.0   1   1   3.6e-05      0.27   10.1   0.0   192   275    18   103    14   119 0.88 Lyase, catalytic
ketoacyl-synt        PF00109.21   254 sp|O34340|FABF_BACSU -            413   9.1e-64  215.3   1.7   1   2   2.1e-66     1e-62  211.8   0.4     2   254     4   246     3   246 0.93 Beta-ketoacyl synthase, N-terminal domain
Ketoacyl-synt_C      PF02801.17   119 sp|O34340|FABF_BACSU -            413   6.9e-41  138.8   1.0   1   1   2.8e-44   1.4e-40  137.8   1.0     1   118   254   368   254   369 0.97 Beta-ketoacyl synthase, C-terminal domain
Thiolase_N           PF00108.18   264 sp|O34340|FABF_BACSU -            413   0.00013   21.0   0.0   1   2     4e-07     0.002   17.1   0.0    81   117   158   193   145   227 0.82 Thiolase, N-terminal domain
adh_short            PF00106.20   167 sp|P51831|FABG_BACSU -            246   6.1e-45  153.1   0.4   1   1   5.4e-48   8.9e-45  152.5   0.4     1   166     5   172     5   173 0.98 short chain dehydrogenase
adh_short_C2         PF13561.1    241 sp|P51831|FABG_BACSU -            246   5.6e-33  114.7   2.3   1   1   4.1e-36   6.8e-33  114.4   2.3     5   240    13   244    11   245 0.94 Enoyl-(Acyl carrier protein) reductase
KR                   PF08659.5    181 sp|P51831|FABG_BACSU -            246   2.6e-25   89.1   0.3   1   1   2.8e-28   4.6e-25   88.3   0.2     2   156     6   161     6   188 0.91 KR domain
Epimerase            PF01370.16   236 sp|P51831|FABG_BACSU -            246   2.7e-06   27.0   0.3   1   1     3e-09   4.9e-06   26.1   0.3     2   123     8   149     7   159 0.87 NAD dependent epimerase/dehydratase family
Saccharop_dh         PF03435.13   386 sp|P51831|FABG_BACSU -            246   1.3e-05   24.4   0.5   1   1   1.2e-08   1.9e-05   23.8   0.5     8   136    15   159     8   161 0.87 Saccharopine dehydrogenase
NAD_binding_10       PF13460.1    183 sp|P51831|FABG_BACSU -            246   0.00031   20.7   0.6   1   1   5.9e-07   0.00098   19.1   0.6     3   127     9   161     8   220 0.69 NADH(P)-binding
NmrA                 PF05368.8    233 sp|P51831|FABG_BACSU -            246     0.011   14.9   0.4   1   1   1.1e-05     0.017   14.3   0.4     2    74     8    85     7   102 0.87 NmrA-like family
DUF460               PF04312.8    138 sp|P51831|FABG_BACSU -            246     0.012   15.1   1.1   1   1     1e-05     0.017   14.6   0.3    32    99     7    77     2    82 0.73 Protein of unknown function (DUF460)
Eno-Rase_NADH_b      PF12242.3     78 sp|P51831|FABG_BACSU -            246     0.044   13.5   1.9   1   2   0.00019      0.31   10.8   0.3    40    68     5    32     3    42 0.79 NAD(P)H binding domain of trans-2-enoyl-CoA reductase
ACP_syn_III_C        PF08541.5     90 sp|O34746|FABH1_BACSU -            312   4.4e-37  125.9   1.0   1   1   9.1e-40   1.4e-36  124.4   0.0     1    90   221   310   221   310 0.99 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal
ACP_syn_III          PF08545.5     80 sp|O34746|FABH1_BACSU -            312   2.2e-30  104.1   0.3   1   1   2.9e-33   4.3e-30  103.2   0.3     1    80   106   184   106   184 0.97 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III
Thiolase_N           PF00108.18   264 sp|O34746|FABH1_BACSU -            312     6e-08   31.9   1.9   1   2   4.3e-11   6.3e-08   31.9   0.3    10   125    35   149    32   171 0.86 Thiolase, N-terminal domain
Chal_sti_synt_C      PF02797.10   151 sp|O34746|FABH1_BACSU -            312   8.8e-07   28.9   0.1   1   1   1.2e-09   1.7e-06   27.9   0.1    21   148   192   309   180   310 0.84 Chalcone and stilbene synthases, C-terminal domain
Chal_sti_synt_N      PF00195.14   227 sp|O34746|FABH1_BACSU -            312   0.00064   19.0   1.4   1   2     2e-06    0.0029   16.8   0.9    96   224    44   167     9   170 0.77 Chalcone and stilbene synthases, N-terminal domain
SpoVAD               PF07451.6    329 sp|O34746|FABH1_BACSU -            312    0.0011   17.5   0.5   2   2   0.00036      0.54    8.6   0.0    32    77   191   235   179   254 0.82 Stage V sporulation protein AD (SpoVAD)
FAE1_CUT1_RppA       PF08392.7    290 sp|O34746|FABH1_BACSU -            312     0.011   14.8   0.1   1   2     2e-05     0.029   13.4   0.0    84   179    52   146     8   182 0.80 FAE1/Type III polyketide synthase-like protein
HMG_CoA_synt_N       PF01154.12   174 sp|O34746|FABH1_BACSU -            312     0.018   14.5   0.2   1   1   2.1e-05     0.031   13.8   0.2     5   144     3   139     1   170 0.78 Hydroxymethylglutaryl-coenzyme A synthase N terminal
ACP_syn_III_C        PF08541.5     90 sp|O07600|FABH2_BACSU -            325   1.5e-32  111.4   0.0   1   1   9.4e-36   3.5e-32  110.2   0.0     1    90   234   323   234   323 0.99 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal
ACP_syn_III          PF08545.5     80 sp|O07600|FABH2_BACSU -            325   2.7e-27   94.2   0.2   1   1   1.6e-30   5.8e-27   93.1   0.2     1    79   107   184   107   185 0.93 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III
Chal_sti_synt_C      PF02797.10   151 sp|O07600|FABH2_BACSU -            325   0.00028   20.8   0.0   1   1   1.5e-07   0.00056   19.8   0.0    21   148   205   322   196   323 0.73 Chalcone and stilbene synthases, C-terminal domain
HMG_CoA_synt_N       PF01154.12   174 sp|O07600|FABH2_BACSU -            325     0.055   13.0   0.0   1   1   2.4e-05     0.087   12.3   0.0     6    92     5    91     2   154 0.80 Hydroxymethylglutaryl-coenzyme A synthase N terminal
adh_short_C2         PF13561.1    241 sp|P54616|FABI_BACSU -            258     6e-82  275.0   0.1   1   1   2.3e-85   6.7e-82  274.8   0.1     1   241    14   254    14   254 0.98 Enoyl-(Acyl carrier protein) reductase
adh_short            PF00106.20   167 sp|P54616|FABI_BACSU -            258   1.4e-07   31.5   0.1   1   1   6.7e-11     2e-07   31.0   0.1    12   166    21   179    11   180 0.83 short chain dehydrogenase
KR                   PF08659.5    181 sp|P54616|FABI_BACSU -            258   0.00032   20.4   0.0   1   2     3e-07    0.0009   18.9   0.0    12    94    21   100    10   111 0.76 KR domain
Enoyl_reductase      PF12241.3    237 sp|P54616|FABI_BACSU -            258     0.055   12.4   0.0   2   2   5.8e-05      0.17   10.8   0.0   133   184   136   185   128   221 0.87 Trans-2-enoyl-CoA reductase catalytic region
Acetyltransf_1       PF00583.19    83 sp|P54616|FABI_BACSU -            258     0.098   12.6   0.0   1   1     9e-05      0.27   11.3   0.0    23    67   144   189    94   199 0.84 Acetyltransferase (GNAT) family
adh_short_C2         PF13561.1    241 sp|P71079|FABL_BACSU -            250   2.6e-42  145.2   0.5   1   1   1.6e-45     3e-42  145.0   0.5     5   239    13   245    10   247 0.96 Enoyl-(Acyl carrier protein) reductase
adh_short            PF00106.20   167 sp|P71079|FABL_BACSU -            250   3.2e-29  101.9   0.5   1   1   2.2e-32   4.2e-29  101.6   0.5     1   166     5   172     5   173 0.96 short chain dehydrogenase
KR                   PF08659.5    181 sp|P71079|FABL_BACSU -            250   1.3e-11   44.4   0.2   1   1   9.9e-15   1.8e-11   44.0   0.2     4   163     8   168     6   183 0.81 KR domain
Epimerase            PF01370.16   236 sp|P71079|FABL_BACSU -            250   0.00025   20.5   0.1   1   1     2e-07   0.00038   19.9   0.1     1    77     7    93     7   143 0.80 NAD dependent epimerase/dehydratase family
Eno-Rase_NADH_b      PF12242.3     78 sp|P71079|FABL_BACSU -            250    0.0018   18.0   1.1   1   2   5.5e-06      0.01   15.6   0.5    40    65     5    29     2    42 0.76 NAD(P)H binding domain of trans-2-enoyl-CoA reductase
Aminotran_5          PF00266.14   371 sp|P71079|FABL_BACSU -            250    0.0073   15.0   0.1   1   1   7.9e-06     0.015   14.0   0.1    77   163    20   103     3   107 0.85 Aminotransferase class-V
HHH_5                PF14520.1     60 sp|P71079|FABL_BACSU -            250     0.029   14.5   0.2   1   1   5.6e-05       0.1   12.7   0.1    11    41    14    58    10    76 0.91 Helix-hairpin-helix domain
IMPDH                PF00478.20   352 sp|P71079|FABL_BACSU -            250     0.036   12.9   0.1   1   1   3.8e-05      0.07   12.0   0.1    97   159    30    92    16   106 0.87 IMP dehydrogenase / GMP reductase domain
FabA                 PF07977.8    138 sp|P94584|FABZ_BACSU -            141   1.9e-45  153.7   0.0   1   1   5.7e-49   2.1e-45  153.5   0.0     1   138    11   134    11   134 0.97 FabA-like domain
MaoC_dehydratas      PF01575.14   123 sp|P94584|FABZ_BACSU -            141   0.00017   20.9   0.0   1   1   6.9e-08   0.00025   20.3   0.0    51   106    59   114    48   132 0.83 MaoC like domain
4HBT                 PF03061.17    79 sp|P94584|FABZ_BACSU -            141   0.00019   21.4   0.0   1   1     1e-07   0.00038   20.5   0.0    15    64    67   117    53   132 0.80 Thioesterase superfamily
4HBT_2               PF13279.1    121 sp|P94584|FABZ_BACSU -            141      0.14   12.6   0.0   1   1   4.2e-05      0.16   12.4   0.0    26    72    62   112    30   138 0.69 Thioesterase-like superfamily
Thiolase_N           PF00108.18   264 sp|O32177|FADA_BACSU -            391   3.4e-81  272.0   3.1   1   1   2.1e-84   6.1e-81  271.2   3.1     1   263     1   260     1   261 0.92 Thiolase, N-terminal domain
Thiolase_C           PF02803.13   123 sp|O32177|FADA_BACSU -            391   4.8e-49  164.8   0.8   1   1   4.2e-52   1.2e-48  163.5   0.4     2   122   269   389   268   390 0.98 Thiolase, C-terminal domain
ketoacyl-synt        PF00109.21   254 sp|O32177|FADA_BACSU -            391   3.2e-06   26.8   0.1   1   1   2.7e-09   8.2e-06   25.4   0.1   168   219    82   133    66   146 0.79 Beta-ketoacyl synthase, N-terminal domain
ACP_syn_III_C        PF08541.5     90 sp|O32177|FADA_BACSU -            391     0.029   14.3   0.1   1   1   3.4e-05       0.1   12.6   0.1     1    85   299   386   299   389 0.82 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal
ECH                  PF00378.15   245 sp|P94549|FADB_BACSU -            258   5.1e-69  232.0   0.0   1   1   7.8e-73   5.8e-69  231.9   0.0     5   245     9   250     5   250 0.96 Enoyl-CoA hydratase/isomerase family
ECH_C                PF13766.1    118 sp|P94549|FADB_BACSU -            258   0.00025   21.1   0.0   1   1   6.4e-08   0.00048   20.2   0.0    28    99   185   254   170   258 0.87 2-enoyl-CoA Hydratase C-terminal region
Acyl-CoA_dh_1        PF00441.19   150 sp|O32176|FADE_BACSU -            594   3.8e-34  117.9   4.6   1   2   4.6e-37   1.7e-33  115.8   0.0     1   146   252   416   252   420 0.95 Acyl-CoA dehydrogenase, C-terminal domain
Acyl-CoA_dh_N        PF02771.11   113 sp|O32176|FADE_BACSU -            594   9.7e-31  106.6   0.1   1   2   1.3e-33   4.9e-30  104.4   0.0     1   113    31   143    31   143 0.93 Acyl-CoA dehydrogenase, N-terminal domain
Acyl-CoA_dh_M        PF02770.14    52 sp|O32176|FADE_BACSU -            594   5.7e-18   64.1   0.3   1   1   2.8e-21   1.1e-17   63.3   0.3     1    52   147   200   147   201 0.97 Acyl-CoA dehydrogenase, middle domain
Acyl-CoA_dh_2        PF08028.6    134 sp|O32176|FADE_BACSU -            594   8.1e-14   52.0   1.5   1   2   6.8e-16   2.5e-12   47.1   0.0     7   133   273   408   268   409 0.85 Acyl-CoA dehydrogenase, C-terminal domain
DUF1906              PF08924.6    136 sp|O34320|FADG_BACSU -            576     1e-43  148.4   2.5   1   1   3.1e-47   2.3e-43  147.3   2.5     2   136   294   427   293   427 0.97 Domain of unknown function (DUF1906)
PG_binding_1         PF01471.13    57 sp|O34320|FADG_BACSU -            576   1.5e-30  104.9   0.9   2   4   3.1e-15   2.3e-11   43.4   0.0     3    57    79   134    77   134 0.95 Putative peptidoglycan binding domain
PG_binding_1         PF01471.13    57 sp|O34320|FADG_BACSU -            576   1.5e-30  104.9   0.9   3   4   4.3e-05      0.32   10.9   0.0     3    53   148   207   146   211 0.73 Putative peptidoglycan binding domain
PG_binding_1         PF01471.13    57 sp|O34320|FADG_BACSU -            576   1.5e-30  104.9   0.9   4   4   6.3e-15   4.7e-11   42.5   0.0     5    57   226   277   222   277 0.94 Putative peptidoglycan binding domain
adh_short_C2         PF13561.1    241 sp|O34717|FADH_BACSU -            254   3.1e-29  102.4   0.2   1   1     3e-32   4.4e-29  101.9   0.2     5   239    12   246    10   247 0.86 Enoyl-(Acyl carrier protein) reductase
adh_short            PF00106.20   167 sp|O34717|FADH_BACSU -            254   1.1e-27   97.0   2.4   1   1   9.3e-31   1.4e-27   96.6   2.4     1   165     4   170     4   172 0.97 short chain dehydrogenase
KR                   PF08659.5    181 sp|O34717|FADH_BACSU -            254   2.9e-09   36.8   0.3   1   1     4e-12   5.9e-09   35.8   0.3     3   122     6   121     5   158 0.86 KR domain
Epimerase            PF01370.16   236 sp|O34717|FADH_BACSU -            254   0.00035   20.0   0.1   1   1   5.5e-07   0.00081   18.8   0.1     1    79     6    95     6   127 0.86 NAD dependent epimerase/dehydratase family
NAD_binding_10       PF13460.1    183 sp|O34717|FADH_BACSU -            254    0.0019   18.2   0.1   1   1   1.8e-06    0.0027   17.7   0.1     1    68     6    75     6   145 0.82 NADH(P)-binding
NAD_binding_2        PF03446.10   163 sp|O34717|FADH_BACSU -            254    0.0072   16.1   0.1   1   1     9e-06     0.013   15.3   0.1     8    45    11    53     3    99 0.68 NAD binding domain of 6-phosphogluconate dehydrogenase
3HCDH_N              PF02737.13   180 sp|O34717|FADH_BACSU -            254     0.021   14.4   0.5   1   1   2.5e-05     0.037   13.6   0.5     7    56    12    60     5    91 0.72 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain
DFP                  PF04127.10   185 sp|O34717|FADH_BACSU -            254     0.069   12.7   0.6   1   1    0.0001      0.15   11.6   0.6    23    91     8    89     5    98 0.68 DNA / pantothenate metabolism flavoprotein
NmrA                 PF05368.8    233 sp|O34717|FADH_BACSU -            254      0.11   11.7   0.1   1   1   0.00012      0.17   11.0   0.1     1    68     6    77     6    93 0.76 NmrA-like family
ATP_bind_2           PF03668.10   284 sp|O34717|FADH_BACSU -            254      0.13   11.2   0.0   1   1   0.00014      0.21   10.6   0.0     3    74     6    75     4    83 0.78 P-loop ATPase protein family
3HCDH_N              PF02737.13   180 sp|O32178|FADN_BACSU -            789   2.1e-44  151.3   0.1   1   1   2.9e-47   4.3e-44  150.3   0.1     1   180     7   205     7   205 0.94 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain
3HCDH                PF00725.17    97 sp|O32178|FADN_BACSU -            789   5.9e-20   71.4   0.2   1   2   2.4e-14   3.5e-11   43.3   0.0     2    96   208   306   208   307 0.91 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain
3HCDH                PF00725.17    97 sp|O32178|FADN_BACSU -            789   5.9e-20   71.4   0.2   2   2   1.7e-08   2.5e-05   24.5   0.0    18    64   374   420   363   438 0.80 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain
ECH                  PF00378.15   245 sp|O32178|FADN_BACSU -            789   4.6e-19   68.5   0.2   1   1   6.9e-22     1e-18   67.3   0.2     3   195   485   691   483   729 0.83 Enoyl-CoA hydratase/isomerase family
NAD_binding_2        PF03446.10   163 sp|O32178|FADN_BACSU -            789    0.0015   18.4   0.3   1   1   1.2e-05     0.018   14.8   0.3     3    98     7   139     5   160 0.63 NAD binding domain of 6-phosphogluconate dehydrogenase
NAD_Gly3P_dh_N       PF01210.18   157 sp|O32178|FADN_BACSU -            789     0.014   15.0   0.8   1   1   5.3e-05     0.078   12.7   0.8     1   106     7   139     7   155 0.64 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus
ApbA                 PF02558.11   151 sp|O32178|FADN_BACSU -            789     0.021   14.2   0.1   1   1   4.6e-05     0.068   12.6   0.1     2    47     9    56     8   149 0.75 Ketopantoate reductase PanE/ApbA
AlaDh_PNT_C          PF01262.16   168 sp|O32178|FADN_BACSU -            789     0.083   12.4   0.3   1   1   0.00029      0.43   10.1   0.0    22    64     7    49     3   105 0.83 Alanine dehydrogenase/PNT, C-terminal domain
DAO                  PF01266.19   358 sp|O32178|FADN_BACSU -            789     0.091   11.6   0.2   1   1   0.00012      0.18   10.6   0.2     2    29     8    35     7    40 0.95 FAD dependent oxidoreductase
Peptidase_M20        PF01546.23   189 sp|O31724|FAPD_BACSU -            426   3.1e-28   98.5   0.2   1   1   1.1e-31   5.2e-28   97.8   0.2     1   187    85   416    85   418 0.96 Peptidase family M20/M25/M40
M20_dimer            PF07687.9    112 sp|O31724|FAPD_BACSU -            426   3.4e-26   91.1   0.1   1   1   1.3e-29   6.3e-26   90.3   0.1     2   108   188   306   187   310 0.96 Peptidase dimerisation domain
SpoOE-like           PF09388.5     45 sp|O31724|FAPD_BACSU -            426     0.038   13.4   0.2   1   1   1.7e-05     0.086   12.3   0.2     2    19     8    25     7    33 0.86 Spo0E like sporulation regulatory protein
HTH_11               PF08279.7     55 sp|O34835|FAPR_BACSU -            188    0.0002   20.9   0.5   1   2   2.8e-07   0.00068   19.2   0.1     2    33     8    39     7    46 0.92 HTH domain
4HBT                 PF03061.17    79 sp|O34835|FAPR_BACSU -            188   0.00023   21.2   0.1   1   1   1.5e-07   0.00037   20.5   0.1    23    70   112   166   101   174 0.80 Thioesterase superfamily
MaoC_dehydratas      PF01575.14   123 sp|O34835|FAPR_BACSU -            188   0.00075   18.8   0.4   1   1   4.7e-07    0.0012   18.2   0.4    50   116   102   167    95   174 0.82 MaoC like domain
HTH_DeoR             PF08220.7     57 sp|O34835|FAPR_BACSU -            188    0.0014   18.1   0.1   1   1   1.2e-06     0.003   17.0   0.1     1    43     8    50     8    60 0.85 DeoR-like helix-turn-helix domain
MaoC_dehydrat_N      PF13452.1    132 sp|O34835|FAPR_BACSU -            188     0.006   16.3   0.2   1   1   5.6e-06     0.014   15.1   0.1    69   117   121   166   103   177 0.80 N-terminal half of MaoC dehydratase
AfsA                 PF03756.8    132 sp|O34835|FAPR_BACSU -            188     0.012   15.2   0.1   1   1   9.2e-06     0.023   14.4   0.1    69   130   124   182   104   184 0.86 A-factor biosynthesis hotdog domain
FdhD-NarQ            PF02634.10   236 sp|P39756|FDHD_BACSU -            262   2.4e-78  262.8   0.0   1   1   1.8e-82   2.7e-78  262.6   0.0     1   235    27   260    27   261 0.95 FdhD/NarQ family
Molybdopterin        PF00384.17   432 sp|Q795Y4|FDHL_BACSU -            980   2.3e-86  290.2   0.0   1   1   4.7e-89   3.5e-86  289.6   0.0     1   431   320   743   320   744 0.93 Molybdopterin oxidoreductase
Molydop_binding      PF01568.16   110 sp|Q795Y4|FDHL_BACSU -            980   3.8e-22   78.1   0.0   1   1   9.8e-25   7.3e-22   77.2   0.0     1   109   826   933   826   934 0.98 Molydopterin dinucleotide binding domain
Molybdop_Fe4S4       PF04879.11    55 sp|Q795Y4|FDHL_BACSU -            980   7.5e-18   64.1   0.4   1   1   2.9e-20   2.1e-17   62.6   0.4     1    55   263   317   263   317 0.98 Molybdopterin oxidoreductase Fe4S4 domain
Fer2_4               PF13510.1     82 sp|Q795Y4|FDHL_BACSU -            980   1.6e-15   56.6   0.9   1   1   6.6e-18   4.9e-15   55.1   0.3     2    77     5    75     4    78 0.97 2Fe-2S iron-sulfur cluster binding domain
NADH-G_4Fe-4S_3      PF10588.4     41 sp|Q795Y4|FDHL_BACSU -            980   2.4e-14   52.2   3.8   1   1   1.3e-16   9.7e-14   50.3   3.8     3    41    88   127    86   127 0.96 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region
Fer4                 PF00037.22    24 sp|Q795Y4|FDHL_BACSU -            980   4.3e-11   41.9  20.8   1   2   5.8e-08   4.3e-05   22.9   2.4     2    19   147   164   146   166 0.91 4Fe-4S binding domain
Fer4                 PF00037.22    24 sp|Q795Y4|FDHL_BACSU -            980   4.3e-11   41.9  20.8   2   2   3.7e-09   2.8e-06   26.6   5.7     1    23   189   211   189   212 0.94 4Fe-4S binding domain
Fer4_10              PF13237.1     52 sp|Q795Y4|FDHL_BACSU -            980   4.8e-07   29.4  11.4   1   2   6.5e-10   4.8e-07   29.4  11.4     3    52   147   207   145   207 0.73 4Fe-4S dicluster domain
Fer4_10              PF13237.1     52 sp|Q795Y4|FDHL_BACSU -            980   4.8e-07   29.4  11.4   2   2   3.6e-05     0.027   14.2   7.2     4    45   191   274   189   282 0.63 4Fe-4S dicluster domain
Fer4_7               PF12838.2     52 sp|Q795Y4|FDHL_BACSU -            980   5.2e-07   29.9  13.5   2   2   6.9e-10   5.2e-07   29.9  13.5     1    52   152   210   152   210 0.80 4Fe-4S dicluster domain
Fer4_6               PF12837.2     24 sp|Q795Y4|FDHL_BACSU -            980   2.8e-06   26.9  23.4   1   2   4.8e-06    0.0036   17.1   3.5     3    19   147   163   145   163 0.95 4Fe-4S binding domain
Fer4_6               PF12837.2     24 sp|Q795Y4|FDHL_BACSU -            980   2.8e-06   26.9  23.4   2   2   2.4e-07   0.00018   21.2   5.0     4    24   191   211   191   211 0.94 4Fe-4S binding domain
Fer4_8               PF13183.1     57 sp|Q795Y4|FDHL_BACSU -            980   5.7e-06   26.2  11.6   2   2   7.7e-09   5.7e-06   26.2  11.6     3    56   151   209   149   210 0.75 4Fe-4S dicluster domain
Fer4_21              PF14697.1     59 sp|Q795Y4|FDHL_BACSU -            980   8.5e-06   25.5  10.4   1   1   1.1e-08   8.5e-06   25.5  10.4     4    54   149   209   147   213 0.71 4Fe-4S dicluster domain
Fer4_15              PF13459.1     65 sp|Q795Y4|FDHL_BACSU -            980     4e-05   24.0   9.6   1   2   6.2e-05     0.046   14.2   0.5     4    21   149   166   147   183 0.87 4Fe-4S single cluster domain
Fer4_15              PF13459.1     65 sp|Q795Y4|FDHL_BACSU -            980     4e-05   24.0   9.6   2   2   7.6e-05     0.057   13.9   0.5     3    21   191   209   189   239 0.83 4Fe-4S single cluster domain
Fer4_2               PF12797.2     22 sp|Q795Y4|FDHL_BACSU -            980   9.5e-05   22.0  12.5   1   2   1.8e-06    0.0013   18.5   1.4     3    20   146   163   144   165 0.91 4Fe-4S binding domain
Fer4_2               PF12797.2     22 sp|Q795Y4|FDHL_BACSU -            980   9.5e-05   22.0  12.5   2   2   2.8e-06    0.0021   17.9   3.9     4    21   190   207   187   207 0.91 4Fe-4S binding domain
Fer4_9               PF13187.1     55 sp|Q795Y4|FDHL_BACSU -            980   0.00042   20.5  17.0   2   2   5.6e-07   0.00042   20.5  17.0     2    54   153   210   152   211 0.73 4Fe-4S dicluster domain
Fer4_16              PF13484.1     67 sp|Q795Y4|FDHL_BACSU -            980   0.00095   19.8  12.6   1   2   1.3e-06   0.00095   19.8  12.6     1    67   152   209   152   209 0.89 4Fe-4S double cluster binding domain
Fer4_17              PF13534.1     61 sp|Q795Y4|FDHL_BACSU -            980    0.0025   18.1  12.7   2   3   3.4e-06    0.0025   18.1  12.7     1    58   152   208   152   212 0.75 4Fe-4S dicluster domain
Fer4_13              PF13370.1     58 sp|Q795Y4|FDHL_BACSU -            980     0.076   13.4  16.5   1   2   0.00031      0.23   11.8   2.1     2    18   149   165   149   168 0.90 4Fe-4S single cluster domain
Fer4_18              PF13746.1     69 sp|Q795Y4|FDHL_BACSU -            980     0.079   13.3  20.9   2   2     5e-05     0.037   14.4   2.7    49    64   193   208   176   212 0.87 4Fe-4S dicluster domain
CDK5_activator       PF03261.10   346 sp|Q795Y4|FDHL_BACSU -            980      0.13   11.6   0.0   1   1   0.00031      0.23   10.7   0.0   226   247   482   503   472   509 0.86 Cyclin-dependent kinase 5 activator protein
Fer4_4               PF12800.2     17 sp|Q795Y4|FDHL_BACSU -            980         2    8.9  29.5   1   2   0.00014       0.1   12.9   3.2     2    15   151   164   150   167 0.89 4Fe-4S binding domain
Fer4_4               PF12800.2     17 sp|Q795Y4|FDHL_BACSU -            980         2    8.9  29.5   2   2   6.7e-05      0.05   13.9   3.7     3    15   195   207   193   221 0.89 4Fe-4S binding domain
Pyr_redox_2          PF07992.9    201 sp|O31475|FENR1_BACSU -            336   8.6e-20   71.4   0.2   1   1   1.1e-22   1.1e-19   71.1   0.2     1   198     9   290     9   293 0.85 Pyridine nucleotide-disulphide oxidoreductase
Pyr_redox            PF00070.22    80 sp|O31475|FENR1_BACSU -            336   2.1e-16   60.0   0.9   1   2   9.7e-05     0.096   13.1   0.1     2    72    10    99     9   108 0.67 Pyridine nucleotide-disulphide oxidoreductase
Pyr_redox            PF00070.22    80 sp|O31475|FENR1_BACSU -            336   2.1e-16   60.0   0.9   2   2   3.5e-14   3.4e-11   43.3   0.1     1    77   157   228   157   235 0.91 Pyridine nucleotide-disulphide oxidoreductase
Pyr_redox_3          PF13738.1    203 sp|O31475|FENR1_BACSU -            336   2.5e-10   40.7   0.0   2   2   1.7e-11   1.7e-08   34.7   0.0    82   200    67   188    62   189 0.77 Pyridine nucleotide-disulphide oxidoreductase
HI0933_like          PF03486.9    409 sp|O31475|FENR1_BACSU -            336   1.4e-07   30.3   0.7   1   2   1.3e-07   0.00012   20.6   0.0     1    40     8    47     8    48 0.95 HI0933-like protein
DAO                  PF01266.19   358 sp|O31475|FENR1_BACSU -            336   1.8e-07   30.4   0.2   1   2   1.3e-05     0.013   14.4   0.0     1    29     9    37     9    44 0.94 FAD dependent oxidoreductase
DAO                  PF01266.19   358 sp|O31475|FENR1_BACSU -            336   1.8e-07   30.4   0.2   2   2   2.5e-05     0.025   13.4   0.0   148   214    68   135    64   190 0.77 FAD dependent oxidoreductase
Thi4                 PF01946.12   230 sp|O31475|FENR1_BACSU -            336   8.5e-05   21.7   0.1   1   2   2.2e-06    0.0021   17.1   0.0    16    54     6    44     1    56 0.88 Thi4 family
K_oxygenase          PF13434.1    341 sp|O31475|FENR1_BACSU -            336   0.00012   21.1   0.1   2   3   5.9e-05     0.059   12.2   0.0   141   233   106   196    71   200 0.75 L-lysine 6-monooxygenase (NADPH-requiring)
NAD_binding_8        PF13450.1     68 sp|O31475|FENR1_BACSU -            336    0.0004   20.3   0.0   1   2   1.2e-05     0.012   15.5   0.0     1    36    12    47    12    62 0.92 NAD(P)-binding Rossmann-like domain
NAD_binding_7        PF13241.1    103 sp|O31475|FENR1_BACSU -            336   0.00098   19.3   0.2   2   2   1.1e-05      0.01   16.0   0.0     5    41   153   195   151   245 0.65 Putative NAD(P)-binding
FMO-like             PF00743.14   532 sp|O31475|FENR1_BACSU -            336    0.0022   16.2   0.0   1   1   3.8e-06    0.0037   15.5   0.0   163   215   136   187   101   196 0.81 Flavin-binding monooxygenase-like
FAD_binding_2        PF00890.19   417 sp|O31475|FENR1_BACSU -            336    0.0023   16.8   0.0   2   2   0.00057      0.56    8.9   0.0   110   255   167   309    65   318 0.72 FAD binding domain
FAD_oxidored         PF12831.2    428 sp|O31475|FENR1_BACSU -            336     0.015   14.4   0.1   1   3   0.00032      0.31   10.0   0.0     1    39     9    47     9    91 0.90 FAD dependent oxidoreductase
NAD_binding_9        PF13454.1    156 sp|O31475|FENR1_BACSU -            336     0.017   14.8   0.2   2   2   0.00052      0.52   10.0   0.0   119   155    85   122    66   123 0.77 FAD-NAD(P)-binding
Amino_oxidase        PF01593.19   450 sp|O31475|FENR1_BACSU -            336      0.12   11.3   0.0   1   2   0.00051      0.51    9.3   0.0   218   290    77   147    56   150 0.71 Flavin containing amine oxidoreductase
Pyr_redox_2          PF07992.9    201 sp|O05268|FENR2_BACSU -            332   8.6e-21   74.7   0.1   1   1     1e-23     1e-20   74.4   0.1     1   199     9   289     9   291 0.86 Pyridine nucleotide-disulphide oxidoreductase
Pyr_redox            PF00070.22    80 sp|O05268|FENR2_BACSU -            332   4.2e-16   59.1   0.8   1   3   0.00063      0.62   10.5   0.0     2    35    10    43     9    53 0.90 Pyridine nucleotide-disulphide oxidoreductase
Pyr_redox            PF00070.22    80 sp|O05268|FENR2_BACSU -            332   4.2e-16   59.1   0.8   3   3     1e-13   9.8e-11   41.9   0.0     1    78   156   227   156   233 0.92 Pyridine nucleotide-disulphide oxidoreductase
Pyr_redox_3          PF13738.1    203 sp|O05268|FENR2_BACSU -            332   1.7e-14   54.4   0.1   1   1   3.8e-15   3.7e-12   46.7   0.1     2   200    12   187    11   189 0.76 Pyridine nucleotide-disulphide oxidoreductase
HI0933_like          PF03486.9    409 sp|O05268|FENR2_BACSU -            332     8e-11   41.0   0.5   1   2   6.8e-07   0.00068   18.2   0.1     1    37     8    44     8    48 0.92 HI0933-like protein
HI0933_like          PF03486.9    409 sp|O05268|FENR2_BACSU -            332     8e-11   41.0   0.5   2   2   1.8e-07   0.00017   20.1   0.0   102   165    61   122    59   126 0.93 HI0933-like protein
K_oxygenase          PF13434.1    341 sp|O05268|FENR2_BACSU -            332   3.6e-08   32.6   0.4   2   2   1.3e-10   1.2e-07   30.9   0.0   101   233    73   195    60   215 0.82 L-lysine 6-monooxygenase (NADPH-requiring)
DAO                  PF01266.19   358 sp|O05268|FENR2_BACSU -            332   3.5e-07   29.4   0.3   1   2   7.3e-06    0.0072   15.2   0.1     1    35     9    44     9    49 0.88 FAD dependent oxidoreductase
DAO                  PF01266.19   358 sp|O05268|FENR2_BACSU -            332   3.5e-07   29.4   0.3   2   2   4.9e-05     0.049   12.5   0.0   145   205    65   125    59   211 0.76 FAD dependent oxidoreductase
NAD_binding_8        PF13450.1     68 sp|O05268|FENR2_BACSU -            332   0.00021   21.2   0.1   1   1   7.1e-07   0.00071   19.5   0.0     1    37    12    48    12    66 0.89 NAD(P)-binding Rossmann-like domain
Thi4                 PF01946.12   230 sp|O05268|FENR2_BACSU -            332   0.00046   19.3   0.0   1   2   1.7e-05     0.017   14.2   0.0    16    54     6    44     1    99 0.89 Thi4 family
GIDA                 PF01134.17   392 sp|O05268|FENR2_BACSU -            332     0.001   18.0   0.9   3   3   0.00064      0.63    8.8   0.0   345   385   268   307   256   314 0.82 Glucose inhibited division protein A
FAD_oxidored         PF12831.2    428 sp|O05268|FENR2_BACSU -            332    0.0016   17.6   0.1   1   1     4e-06     0.004   16.2   0.1     1    40     9    48     9    97 0.85 FAD dependent oxidoreductase
Oxidored_nitro       PF00148.14   398 sp|O05268|FENR2_BACSU -            332     0.046   12.3   0.0   1   1   6.8e-05     0.067   11.8   0.0   251   315   134   198   114   238 0.82 Nitrogenase component 1 type Oxidoreductase
FMO-like             PF00743.14   532 sp|O05268|FENR2_BACSU -            332     0.047   11.8   0.0   1   1   6.6e-05     0.065   11.4   0.0   101   215    82   186    58   196 0.76 Flavin-binding monooxygenase-like
Peptidase_C69        PF03577.10   403 sp|O05268|FENR2_BACSU -            332     0.087   11.6   0.0   1   1   0.00013      0.13   11.1   0.0    99   148   201   250   190   255 0.89 Peptidase family C69
Peripla_BP_2         PF01497.13   238 sp|P40409|FEUA_BACSU -            317   3.3e-32  111.5   0.7   1   1   2.2e-35   4.6e-32  111.0   0.7    43   233    98   288    73   291 0.87 Periplasmic binding protein
DUF2031              PF09592.5    228 sp|P40409|FEUA_BACSU -            317    0.0047   16.1   1.2   1   1   4.2e-06     0.009   15.1   1.2    89   135   143   191   132   216 0.78 Protein of unknown function (DUF2031)
Lipoxygenase         PF00305.14   667 sp|P40409|FEUA_BACSU -            317     0.018   13.0   0.2   1   1   1.3e-05     0.028   12.4   0.2   578   649   125   192    93   213 0.81 Lipoxygenase
DUF3316              PF11777.3    114 sp|P40409|FEUA_BACSU -            317      0.05   13.3   0.3   1   1     5e-05      0.11   12.3   0.3     1    34     1    34     1    45 0.70 Protein of unknown function (DUF3316)
DIM                  PF08194.7     36 sp|P40409|FEUA_BACSU -            317      0.27   11.2   2.2   1   1   0.00033      0.71    9.8   2.2     1    19     1    19     1    22 0.91 DIM protein
ETRAMP               PF09716.5     84 sp|P40409|FEUA_BACSU -            317       3.2    7.7  12.2   1   2   0.00029      0.62   10.0   0.3     5    61     3    63     1    66 0.86 Malarial early transcribed membrane protein (ETRAMP)
FecCD                PF01032.13   311 sp|P40410|FEUB_BACSU -            334   1.8e-85  286.5  26.1   1   1   4.3e-89   2.1e-85  286.2  26.1     2   311    18   327    17   327 0.98 FecCD transport family
Lysis_S              PF04971.7     68 sp|P40410|FEUB_BACSU -            334     0.076   12.7   1.1   1   1   5.5e-05      0.27   10.9   0.1    28    60   145   177   139   181 0.94 Lysis protein S
Spore_YabQ           PF09578.5     80 sp|P40410|FEUB_BACSU -            334       1.9    8.5   6.2   1   3   0.00014      0.71    9.8   0.6     5    77    67   137    64   139 0.82 Spore cortex protein YabQ (Spore_YabQ)
FecCD                PF01032.13   311 sp|P40411|FEUC_BACSU -            336   5.5e-88  294.7  25.4   1   1     9e-92   6.7e-88  294.4  25.4     1   311    11   329    11   329 0.98 FecCD transport family
ABC2_membrane_5      PF13346.1    206 sp|P40411|FEUC_BACSU -            336    0.0083   15.4   3.7   1   2   1.1e-06    0.0083   15.4   3.7    88   202   122   259   118   263 0.67 ABC-2 family transporter protein
FecCD                PF01032.13   311 sp|P49936|FHUB_BACSU -            384   1.6e-90  303.1  35.6   2   2   3.2e-94   1.6e-90  303.1  35.6     2   311    70   379    67   379 0.98 FecCD transport family
Neurensin            PF14927.1    141 sp|P49936|FHUB_BACSU -            384      0.61    9.4  14.5   3   3   4.8e-05      0.24   10.8   4.8    53   122   248   319   238   323 0.84 Neurensin
ABC-3                PF00950.12   258 sp|P49936|FHUB_BACSU -            384       5.5    6.2  29.8   3   3   0.00013      0.64    9.2  22.3    73   252   191   374   140   378 0.71 ABC 3 transport family
ABC_tran             PF00005.22   137 sp|P49938|FHUC_BACSU -            269     1e-31  110.0   0.0   1   1   2.6e-34   1.5e-31  109.5   0.0     2   136    20   167    19   168 0.96 ABC transporter
AAA_21               PF13304.1    303 sp|P49938|FHUC_BACSU -            269   6.1e-11   42.8   0.2   1   2   1.2e-07     7e-05   22.9   0.0     1    24    31    54    31    99 0.81 AAA domain
AAA_21               PF13304.1    303 sp|P49938|FHUC_BACSU -            269   6.1e-11   42.8   0.2   2   2   3.3e-06    0.0019   18.2   0.0   230   293   133   194   109   200 0.88 AAA domain
SMC_N                PF02463.14   220 sp|P49938|FHUC_BACSU -            269   3.3e-09   36.2   0.0   1   2   1.6e-05    0.0091   15.2   0.1    24    44    29    49    19    53 0.83 RecF/RecN/SMC N terminal domain
SMC_N                PF02463.14   220 sp|P49938|FHUC_BACSU -            269   3.3e-09   36.2   0.0   2   2   4.9e-07   0.00028   20.1   0.0   100   189    49   188    46   215 0.90 RecF/RecN/SMC N terminal domain
AAA_29               PF13555.1     62 sp|P49938|FHUC_BACSU -            269   6.2e-06   25.6   0.0   1   1   2.1e-08   1.2e-05   24.7   0.0    19    51    26    57    19    68 0.82 P-loop containing region of AAA domain
AAA_15               PF13175.1    415 sp|P49938|FHUC_BACSU -            269   7.9e-06   25.1   0.1   1   2   1.9e-05     0.011   14.7   0.0    17    43    23    56     6    91 0.75 AAA ATPase domain
AAA_15               PF13175.1    415 sp|P49938|FHUC_BACSU -            269   7.9e-06   25.1   0.1   2   2    0.0015      0.85    8.5   0.0   364   406   158   194   116   199 0.82 AAA ATPase domain
AAA_16               PF13191.1    185 sp|P49938|FHUC_BACSU -            269   1.5e-05   25.0   0.3   1   1   1.2e-07   6.6e-05   22.9   0.3    23   166    28   207    19   214 0.56 AAA ATPase domain
ABC_ATPase           PF09818.4    448 sp|P49938|FHUC_BACSU -            269     6e-05   21.8   0.2   1   2    0.0004      0.23    9.9   0.1   240   271    24    56    21    58 0.87 Predicted ATPase of the ABC class
ABC_ATPase           PF09818.4    448 sp|P49938|FHUC_BACSU -            269     6e-05   21.8   0.2   2   2   0.00045      0.25    9.8   0.0   324   395   141   212   133   230 0.85 Predicted ATPase of the ABC class
AAA_23               PF13476.1    202 sp|P49938|FHUC_BACSU -            269   0.00011   22.5   0.1   1   1   4.3e-07   0.00025   21.4   0.1    11    38    20    48    13    59 0.86 AAA domain
AAA_14               PF13173.1    128 sp|P49938|FHUC_BACSU -            269   0.00062   19.6   0.0   1   2     1e-05    0.0058   16.5   0.0     2    41    29    68    28    90 0.73 AAA domain
ATP-synt_ab          PF00006.20   215 sp|P49938|FHUC_BACSU -            269    0.0008   18.9   0.3   1   1   2.3e-06    0.0013   18.2   0.3     6    50    20    64    14   230 0.85 ATP synthase alpha/beta family, nucleotide-binding domain
Rad17                PF03215.10   519 sp|P49938|FHUC_BACSU -            269    0.0025   16.5   0.1   1   1   6.2e-06    0.0035   16.0   0.1    46    81    30    66    21    81 0.75 Rad17 cell cycle checkpoint protein
DUF258               PF03193.11   161 sp|P49938|FHUC_BACSU -            269    0.0025   16.9   0.1   1   1   6.6e-06    0.0037   16.4   0.1    21    66    14    60     1    79 0.77 Protein of unknown function, DUF258
AAA_5                PF07728.9    139 sp|P49938|FHUC_BACSU -            269    0.0029   17.3   0.1   1   1   2.6e-05     0.015   15.0   0.0     4    30    34    62    32    98 0.71 AAA domain (dynein-related subfamily)
AAA_25               PF13481.1    194 sp|P49938|FHUC_BACSU -            269     0.003   16.9   0.1   1   2   0.00012      0.07   12.5   0.0    30    53    26    49    15    63 0.89 AAA domain
PRK                  PF00485.13   194 sp|P49938|FHUC_BACSU -            269     0.007   15.9   0.0   1   2    0.0003      0.17   11.4   0.0     4    46    34    79    31    91 0.72 Phosphoribulokinase / Uridine kinase family
Mg_chelatase         PF01078.16   207 sp|P49938|FHUC_BACSU -            269    0.0096   15.1   0.1   1   1   3.5e-05      0.02   14.0   0.0    16    70    23    77    13   100 0.82 Magnesium chelatase, subunit ChlI
AAA                  PF00004.24   132 sp|P49938|FHUC_BACSU -            269     0.014   15.6   0.2   1   1   4.8e-05     0.028   14.6   0.0     3    50    34    83    32   100 0.77 ATPase family associated with various cellular activities (AAA)
AAA_22               PF13401.1    131 sp|P49938|FHUC_BACSU -            269     0.014   15.5   2.8   1   1   0.00022      0.12   12.4   2.8     4    57    29    78    24   204 0.64 AAA domain
RNA_helicase         PF00910.17   107 sp|P49938|FHUC_BACSU -            269     0.019   15.1   0.0   1   1   6.9e-05     0.039   14.1   0.0     3    37    34    63    32    97 0.78 RNA helicase
Arch_ATPase          PF01637.13   234 sp|P49938|FHUC_BACSU -            269     0.022   14.4   0.0   1   1   8.1e-05     0.046   13.4   0.0    21    56    30    64    20    94 0.78 Archaeal ATPase
AAA_30               PF13604.1    196 sp|P49938|FHUC_BACSU -            269     0.034   13.7   0.0   1   1   0.00011     0.062   12.8   0.0    18    67    29    80    23   136 0.65 AAA domain
ATP_bind_1           PF03029.12   238 sp|P49938|FHUC_BACSU -            269     0.038   13.5   0.1   1   2    0.0013      0.74    9.3   0.0     2    23    35    56    34    63 0.86 Conserved hypothetical ATP binding protein
G-alpha              PF00503.15   389 sp|P49938|FHUC_BACSU -            269     0.064   11.9   0.1   1   1   0.00016     0.094   11.3   0.1    63    85    34    56    28    79 0.90 G-protein alpha subunit
NACHT                PF05729.7    166 sp|P49938|FHUC_BACSU -            269     0.079   12.6   0.2   1   2   0.00092      0.52    9.9   0.1     4    25    33    54    30    61 0.83 NACHT domain
SbcCD_C              PF13558.1     90 sp|P49938|FHUC_BACSU -            269     0.084   12.8   0.1   1   1    0.0012      0.71    9.8   0.1    19    89   126   183   115   184 0.71 Putative exonuclease SbcCD, C subunit
AAA_19               PF13245.1     76 sp|P49938|FHUC_BACSU -            269     0.095   12.4   0.0   1   1   0.00077      0.44   10.3   0.0    10    52    29    64    22    85 0.78 Part of AAA domain
Peripla_BP_2         PF01497.13   238 sp|P37580|FHUD_BACSU -            315   1.4e-35  122.5   0.1   1   1   4.1e-39     2e-35  122.0   0.1    51   236   106   291    72   292 0.92 Periplasmic binding protein
DUF3693              PF12472.3     60 sp|P37580|FHUD_BACSU -            315      0.05   13.2   1.3   1   2     2e-05     0.097   12.2   0.3    20    53     3    37     2    40 0.90 Phage related protein
FecCD                PF01032.13   311 sp|P49937|FHUG_BACSU -            336   2.7e-95  318.7  34.0   1   1   4.3e-99   3.2e-95  318.5  34.0     1   311    18   334    17   334 0.99 FecCD transport family
DUF4133              PF13571.1     96 sp|P49937|FHUG_BACSU -            336       2.8    8.2   7.3   2   2   8.2e-05      0.61   10.3   1.2    21    65   130   176   111   187 0.88 Domain of unknown function (DUF4133)
Flavodoxin_1         PF00258.20   143 sp|O34737|FLAV_BACSU -            158   2.1e-29  102.3   0.2   1   1   8.2e-33   2.4e-29  102.1   0.2     1   140     6   136     6   139 0.89 Flavodoxin
Flavodoxin_3         PF12641.2    160 sp|O34737|FLAV_BACSU -            158   1.5e-09   37.5   0.0   1   1   6.1e-13   1.8e-09   37.2   0.0     1    88     5    98     5   115 0.87 Flavodoxin domain
Flavodoxin_5         PF12724.2    143 sp|O34737|FLAV_BACSU -            158   1.4e-06   28.3   0.0   1   1   6.1e-10   1.8e-06   28.0   0.0     1    82     5    89     5   157 0.88 Flavodoxin domain
Flavodoxin_NdrI      PF07972.6    122 sp|O34737|FLAV_BACSU -            158    0.0046   16.8   0.0   1   1   2.1e-06    0.0063   16.4   0.0     1    91     6   100     6   110 0.71 NrdI Flavodoxin like
Flavodoxin_4         PF12682.2    156 sp|O34737|FLAV_BACSU -            158    0.0087   15.4   0.2   1   2   0.00021      0.64    9.3   0.0     1    31     3    33     3    44 0.84 Flavodoxin
Flavodoxin_1         PF00258.20   143 sp|O34589|FLAW_BACSU -            151   2.3e-32  111.9   0.5   1   1   1.1e-35   2.6e-32  111.7   0.5     1   140     6   137     6   140 0.91 Flavodoxin
Flavodoxin_3         PF12641.2    160 sp|O34589|FLAW_BACSU -            151   2.9e-05   23.5   0.0   1   1   1.4e-08   3.6e-05   23.2   0.0     2    65     6    76     5   113 0.76 Flavodoxin domain
Flavodoxin_5         PF12724.2    143 sp|O34589|FLAW_BACSU -            151   7.8e-05   22.7   0.0   1   1   5.7e-08   0.00014   21.8   0.0     1    69     5    76     5    98 0.73 Flavodoxin domain
Flavodoxin_4         PF12682.2    156 sp|O34589|FLAW_BACSU -            151   0.00013   21.3   0.1   1   2   0.00011      0.28   10.5   0.0     1    33     3    35     3    45 0.87 Flavodoxin
Flavodoxin_4         PF12682.2    156 sp|O34589|FLAW_BACSU -            151   0.00013   21.3   0.1   2   2   0.00022      0.54    9.6   0.0    68   114    44    94    34   119 0.73 Flavodoxin
FMN_red              PF03358.10   152 sp|O34589|FLAW_BACSU -            151   0.00048   19.6   0.0   1   1   2.7e-07   0.00068   19.1   0.0     2    72     3    80     2    82 0.84 NADPH-dependent FMN reductase
Flavodoxin_NdrI      PF07972.6    122 sp|O34589|FLAW_BACSU -            151     0.006   16.4   0.0   1   1   3.9e-06    0.0096   15.8   0.0     1   100     6   110     6   113 0.71 NrdI Flavodoxin like
Flagellin_N          PF00669.15   139 sp|P02968|FLA_BACSU  -            304   8.7e-45  151.9  12.3   1   2   4.1e-48   8.7e-45  151.9  12.3     1   138     3   142     3   143 0.99 Bacterial flagellin N-terminal helical region
Flagellin_C          PF00700.16    86 sp|P02968|FLA_BACSU  -            304   8.7e-33  112.3   8.1   1   1   4.1e-36   8.7e-33  112.3   8.1     2    86   219   303   218   303 0.98 Bacterial flagellin C-terminal helical region
Vps5                 PF09325.5    236 sp|P02968|FLA_BACSU  -            304     0.018   14.2   3.1   2   2   1.1e-05     0.023   13.9   1.0    36    78   214   256   201   294 0.82 Vps5 C terminal like
DivIVA               PF05103.8    131 sp|P02968|FLA_BACSU  -            304       3.8    7.5  12.3   2   2   6.7e-05      0.14   12.1   3.0    22   102   220   300   209   303 0.87 DivIVA protein
Flg_bb_rod           PF00460.15    31 sp|P24500|FLGB_BACSU -            129   8.8e-12   44.4   2.0   1   1   5.1e-15   1.9e-11   43.4   1.1     1    31     8    38     8    38 0.96 Flagella basal body rod protein
Flg_bbr_C            PF06429.8     74 sp|P24500|FLGB_BACSU -            129   0.00016   21.5   0.4   1   1   7.9e-08   0.00029   20.6   0.4    33    59    86   112    64   126 0.82 Flagellar basal body rod FlgEFG protein C-terminal
Flg_bb_rod           PF00460.15    31 sp|P24501|FLGC_BACSU -            150   3.2e-12   45.8   0.9   1   2   4.3e-16   3.2e-12   45.8   0.9     1    31     7    37     7    37 0.97 Flagella basal body rod protein
Flg_bbr_C            PF06429.8     74 sp|P24501|FLGC_BACSU -            150     2e-11   43.6   0.1   1   1   5.1e-15   3.8e-11   42.7   0.1    22    73    99   147    82   148 0.86 Flagellar basal body rod FlgEFG protein C-terminal
Flg_bbr_C            PF06429.8     74 sp|P23446|FLGG_BACSU -            264   7.2e-25   86.6   0.6   2   2   2.6e-28   1.9e-24   85.3   0.1     2    74   184   262   183   262 0.86 Flagellar basal body rod FlgEFG protein C-terminal
Flg_bb_rod           PF00460.15    31 sp|P23446|FLGG_BACSU -            264   1.3e-13   50.2   0.2   1   1   5.1e-17   3.8e-13   48.8   0.2     1    31     5    35     5    35 0.98 Flagella basal body rod protein
Flg_bbr_C            PF06429.8     74 sp|P39810|FLGK_BACSU -            507   7.7e-12   44.9   3.7   2   2   2.1e-15   7.7e-12   44.9   3.7    23    73   454   500   434   501 0.80 Flagellar basal body rod FlgEFG protein C-terminal
Flg_bb_rod           PF00460.15    31 sp|P39810|FLGK_BACSU -            507   2.2e-11   43.1   6.2   1   1   2.6e-14   9.6e-11   41.1   6.2     1    31     8    38     8    38 0.97 Flagella basal body rod protein
Fmp27_WPPW           PF10359.4    475 sp|P39810|FLGK_BACSU -            507     0.028   12.8   1.3   1   1   1.3e-05     0.049   12.0   1.3   279   365    74   164     9   198 0.81 RNA pol II promoter Fmp27 protein domain
Flagellin_N          PF00669.15   139 sp|P96501|FLGL_BACSU -            298   5.3e-24   84.6   6.9   1   2   1.4e-27   5.3e-24   84.6   6.9     5   139     7   140     3   140 0.97 Bacterial flagellin N-terminal helical region
Flagellin_C          PF00700.16    86 sp|P96501|FLGL_BACSU -            298     8e-08   32.3   0.5   2   2   2.2e-11     8e-08   32.3   0.5     3    86   216   297   214   297 0.94 Bacterial flagellin C-terminal helical region
DUF2408              PF10303.4    134 sp|P96501|FLGL_BACSU -            298     0.037   14.1   1.9   2   2   5.2e-05      0.19   11.8   0.1    18    67    85   137    73   247 0.82 Protein of unknown function (DUF2408)
MafB19-deam          PF14437.1    146 sp|P96501|FLGL_BACSU -            298      0.12   12.0   0.7   1   1   6.5e-05      0.24   11.0   0.7    10    66    98   161    90   180 0.67 MafB19-like deaminase
FlgM                 PF04316.8     57 sp|P39809|FLGM_BACSU -             88   6.2e-19   67.6   1.8   1   1   2.1e-22     1e-18   66.9   1.8     1    57    32    85    32    85 0.96 Anti-sigma-28 factor, FlgM
DUF3138              PF11336.3    514 sp|P39809|FLGM_BACSU -             88      0.05   11.7   1.3   1   1   1.1e-05     0.052   11.7   1.3    49   104    22    77     2    82 0.80 Protein of unknown function (DUF3138)
FHIPEP               PF00771.15   658 sp|P35620|FLHA_BACSU -            677  3.1e-266  884.9   9.8   1   1  7.2e-270  3.6e-266  884.7   9.8     1   658    14   669    14   669 0.99 FHIPEP family
ProQ                 PF04352.8    115 sp|P35620|FLHA_BACSU -            677    0.0034   16.9   0.2   2   2   1.1e-05     0.052   13.1   0.0     4    50   488   532   486   546 0.78 ProQ/FINO family
MutS_III             PF05192.13   204 sp|P35620|FLHA_BACSU -            677      0.03   14.1   0.1   1   1     1e-05     0.052   13.3   0.1    70   186   506   625   486   664 0.71 MutS domain III
Bac_export_2         PF01312.14   343 sp|P35538|FLHB_BACSU -            360  1.7e-136  454.6   6.7   1   1  2.5e-140  1.9e-136  454.4   6.7     2   343    11   353    10   353 0.99 FlhB HrpN YscU SpaS Family
SRP54                PF00448.17   196 sp|Q01960|FLHF_BACSU -            366   8.3e-50  168.9   0.1   1   1   1.7e-52   8.3e-50  168.9   0.1     2   194   176   364   175   366 0.92 SRP54-type protein, GTPase domain
cobW                 PF02492.14   178 sp|Q01960|FLHF_BACSU -            366   3.9e-05   23.1   0.0   1   1   1.8e-07   9.1e-05   21.9   0.0     3   111   178   277   176   333 0.64 CobW/HypB/UreG, nucleotide-binding domain
AAA_24               PF13479.1    213 sp|Q01960|FLHF_BACSU -            366   0.00015   21.4   0.0   1   1   6.4e-07   0.00032   20.3   0.0     6    78   178   262   174   267 0.81 AAA domain
Zeta_toxin           PF06414.7    201 sp|Q01960|FLHF_BACSU -            366    0.0002   20.5   0.0   1   1   7.2e-07   0.00036   19.7   0.0    14    57   173   219   163   276 0.75 Zeta toxin
MMR_HSR1             PF01926.18   116 sp|Q01960|FLHF_BACSU -            366   0.00027   20.8   0.0   1   1   1.1e-06   0.00055   19.8   0.0     2    82   178   284   177   331 0.68 50S ribosome-binding GTPase
DEAD                 PF00270.24   169 sp|Q01960|FLHF_BACSU -            366    0.0015   18.0   0.4   1   2   3.5e-05     0.017   14.5   0.2    16   106   177   270   165   290 0.65 DEAD/DEAH box helicase
T2SE                 PF00437.15   272 sp|Q01960|FLHF_BACSU -            366    0.0016   17.3   0.0   1   1     7e-06    0.0035   16.2   0.0   128   162   175   210   160   235 0.77 Type II/IV secretion system protein
UvrD-helicase        PF00580.16   315 sp|Q01960|FLHF_BACSU -            366    0.0018   17.6   0.6   1   1   5.9e-06    0.0029   16.9   0.1     6    66   170   228   165   308 0.82 UvrD/REP helicase N-terminal domain
PduV-EutP            PF10662.4    143 sp|Q01960|FLHF_BACSU -            366    0.0018   17.7   0.9   1   2    0.0012      0.59    9.6   0.1     2    26   176   200   175   220 0.74 Ethanolamine utilisation - propanediol utilisation
AAA_14               PF13173.1    128 sp|Q01960|FLHF_BACSU -            366    0.0032   17.3   1.7   1   1   1.1e-05    0.0052   16.6   0.4     2    80   175   253   174   321 0.76 AAA domain
AAA_28               PF13521.1    163 sp|Q01960|FLHF_BACSU -            366    0.0036   17.2   0.1   1   1     2e-05    0.0099   15.8   0.1     2    57   178   238   177   267 0.60 AAA domain
AAA_33               PF13671.1    143 sp|Q01960|FLHF_BACSU -            366    0.0076   16.1   0.0   1   1   2.7e-05     0.013   15.3   0.0     2    76   178   259   177   298 0.68 AAA domain
AAA_22               PF13401.1    131 sp|Q01960|FLHF_BACSU -            366    0.0084   16.2   0.0   1   1   3.4e-05     0.017   15.2   0.0     5    50   176   218   170   293 0.66 AAA domain
ABC_tran             PF00005.22   137 sp|Q01960|FLHF_BACSU -            366    0.0085   16.3   0.0   1   1   5.9e-05     0.029   14.6   0.0    11    51   175   216   173   327 0.63 ABC transporter
Arch_ATPase          PF01637.13   234 sp|Q01960|FLHF_BACSU -            366     0.014   15.0   0.2   1   1   5.9e-05     0.029   14.0   0.2    21   112   176   277   167   326 0.66 Archaeal ATPase
AAA_17               PF13207.1    121 sp|Q01960|FLHF_BACSU -            366     0.016   16.0   0.0   1   1   7.4e-05     0.037   14.8   0.0     2    40   178   221   178   324 0.62 AAA domain
Miro                 PF08477.8    119 sp|Q01960|FLHF_BACSU -            366     0.016   15.7   0.2   1   1   8.2e-05      0.04   14.3   0.2     2    40   178   216   177   309 0.69 Miro-like protein
ResIII               PF04851.10   184 sp|Q01960|FLHF_BACSU -            366     0.023   14.5   0.1   1   1   8.4e-05     0.041   13.7   0.1    27   103   177   259   150   300 0.69 Type III restriction enzyme, res subunit
DUF258               PF03193.11   161 sp|Q01960|FLHF_BACSU -            366     0.025   13.7   0.0   1   1   0.00011     0.056   12.6   0.0    25    57   165   197   149   226 0.85 Protein of unknown function, DUF258
CbiA                 PF01656.18   195 sp|Q01960|FLHF_BACSU -            366     0.027   13.8   1.2   1   1   0.00022      0.11   11.9   1.2     3   104   179   262   177   324 0.72 CobQ/CobB/MinD/ParA nucleotide binding domain
AAA_30               PF13604.1    196 sp|Q01960|FLHF_BACSU -            366     0.033   13.7   0.1   1   1   0.00018      0.09   12.3   0.0    19   103   176   262   172   267 0.62 AAA domain
AAA_16               PF13191.1    185 sp|Q01960|FLHF_BACSU -            366     0.034   14.1   0.0   1   1   0.00011     0.053   13.5   0.0    24    88   175   243   153   304 0.67 AAA ATPase domain
MobB                 PF03205.9    140 sp|Q01960|FLHF_BACSU -            366     0.038   13.6   3.7   2   2   0.00069      0.34   10.6   0.5     3    67   178   230   176   261 0.61 Molybdopterin guanine dinucleotide synthesis protein B
PhoH                 PF02562.11   205 sp|Q01960|FLHF_BACSU -            366      0.04   13.1   0.0   1   1   0.00015     0.073   12.2   0.0    18    54   174   211   160   236 0.82 PhoH-like protein
AAA_19               PF13245.1     76 sp|Q01960|FLHF_BACSU -            366     0.067   12.9   0.0   1   1    0.0003      0.15   11.8   0.0    10    34   175   199   168   232 0.79 Part of AAA domain
UPF0079              PF02367.12   123 sp|Q01960|FLHF_BACSU -            366     0.067   12.8   0.8   1   1   0.00069      0.34   10.5   0.8    15    55   175   220   168   253 0.75 Uncharacterised P-loop hydrolase UPF0079
TrwB_AAD_bind        PF10412.4    386 sp|Q01960|FLHF_BACSU -            366     0.067   11.7   0.1   1   1   0.00031      0.15   10.6   0.1    16    47   176   207   168   215 0.80 Type IV secretion-system coupling protein DNA-binding domain
AAA_18               PF13238.1    129 sp|Q01960|FLHF_BACSU -            366      0.08   13.2   0.1   1   1   0.00032      0.16   12.2   0.1     1    28   178   209   178   294 0.58 AAA domain
AAA_29               PF13555.1     62 sp|Q01960|FLHF_BACSU -            366      0.11   11.9   0.0   1   1   0.00044      0.22   11.0   0.0    20    45   174   197   165   210 0.73 P-loop containing region of AAA domain
DUF87                PF01935.12   229 sp|Q01960|FLHF_BACSU -            366      0.12   12.1   1.4   1   1   0.00055      0.27   11.0   0.4    28    45   180   197   173   215 0.82 Domain of unknown function DUF87
Flg_bbr_C            PF06429.8     74 sp|P39752|FLHO_BACSU -            270   4.2e-17   61.8   1.7   2   2   5.7e-21   4.2e-17   61.8   1.7     2    73   190   265   189   266 0.88 Flagellar basal body rod FlgEFG protein C-terminal
Flg_bb_rod           PF00460.15    31 sp|P39752|FLHO_BACSU -            270   1.2e-13   50.4   2.9   1   2   1.6e-17   1.2e-13   50.4   2.9     1    31     5    35     5    35 0.99 Flagella basal body rod protein
Flg_bbr_C            PF06429.8     74 sp|P39753|FLHP_BACSU -            269   3.3e-19   68.5   4.5   2   2   8.9e-23   3.3e-19   68.5   4.5     1    72   191   266   191   268 0.82 Flagellar basal body rod FlgEFG protein C-terminal
Flg_bb_rod           PF00460.15    31 sp|P39753|FLHP_BACSU -            269   1.7e-11   43.5   6.3   1   2   7.9e-15   2.9e-11   42.8   2.6     1    31     5    35     5    35 0.98 Flagella basal body rod protein
Mis14                PF08641.7    139 sp|P39753|FLHP_BACSU -            269    0.0015   18.6   0.6   1   1   6.8e-07    0.0025   17.8   0.1     6    64     9    67     4    69 0.85 Kinetochore protein Mis14 like
FliD_C               PF07195.7    239 sp|P39738|FLID_BACSU -            498   1.3e-62  211.2  20.4   2   2   1.2e-65   1.3e-62  211.2  20.4     1   239   225   487   225   487 0.98 Flagellar hook-associated protein 2 C-terminus
FliD_N               PF02465.13    99 sp|P39738|FLID_BACSU -            498   1.3e-28   99.2   7.6   1   3   1.1e-31   1.3e-28   99.2   7.6     1    99     9   109     9   109 0.97 Flagellar hook-associated protein 2 N-terminus
Flagellin_IN         PF07196.8     56 sp|P39738|FLID_BACSU -            498   3.2e-09   36.6   4.6   2   2   2.8e-12   3.2e-09   36.6   4.6     1    54   124   185   124   187 0.88 Flagellin hook IN motif
DUF948               PF06103.6     90 sp|P39738|FLID_BACSU -            498   3.1e-06   26.9   6.4   2   3   1.1e-06    0.0013   18.5   0.1    20    68   249   297   244   299 0.92 Bacterial protein of unknown function (DUF948)
DUF3231              PF11553.3    166 sp|P39738|FLID_BACSU -            498     0.012   15.1   1.2   1   2   9.4e-05      0.11   12.0   0.1    54    95    44    85    31   107 0.88 Protein of unknown function (DUF3231)
AIP3                 PF03915.8    424 sp|P39738|FLID_BACSU -            498      0.27   10.0  11.0   3   3   1.7e-05     0.019   13.8   1.4    41   189   348   493   330   498 0.78 Actin interacting protein 3
Syntaxin-18_N        PF10496.4     87 sp|P39738|FLID_BACSU -            498      0.29   11.0   8.6   1   2   0.00046      0.53   10.1   0.5    36    77    36    79    16    84 0.74 SNARE-complex protein Syntaxin-18 N-terminus
Syntaxin-6_N         PF09177.6     97 sp|P39738|FLID_BACSU -            498      0.66   10.4   6.1   2   2   0.00043      0.49   10.8   0.3    15    83   421   486   391   494 0.81 Syntaxin 6, N-terminal
FliE                 PF02049.13    97 sp|P24502|FLIE_BACSU -            106   7.3e-29   99.6  12.5   1   1   1.8e-32   8.8e-29   99.4  12.5     5    97    14   106     6   106 0.94 Flagellar hook-basal body complex protein FliE
Pex19                PF04614.7    249 sp|P24502|FLIE_BACSU -            106     0.044   13.4   4.7   1   1   9.4e-06     0.047   13.3   4.7    43   105     8    75     2   105 0.68 Pex19 protein family
MSC                  PF09402.5    334 sp|P24502|FLIE_BACSU -            106      0.12   11.1   1.8   1   1   2.8e-05      0.14   10.8   1.8   133   216    16    99     9   104 0.79 Man1-Src1p-C-terminal domain
YscJ_FliF            PF01514.12   207 sp|P23447|FLIF_BACSU -            536   8.3e-60  201.4   1.9   1   1   6.7e-63   8.3e-60  201.4   1.9     3   203    21   225    19   230 0.95 Secretory protein of YscJ/FliF family
YscJ_FliF_C          PF08345.6    160 sp|P23447|FLIF_BACSU -            536   5.4e-25   88.2  10.9   1   1   1.3e-27   1.6e-24   86.6  10.9     1   152   257   415   257   432 0.86 Flagellar M-ring protein C-terminal
Lamp                 PF01299.12   306 sp|P23447|FLIF_BACSU -            536   0.00067   18.8   0.0   1   1   9.3e-07    0.0011   18.1   0.0   188   301   364   478   344   483 0.77 Lysosome-associated membrane glycoprotein (Lamp)
LRR19-TM             PF15176.1    102 sp|P23447|FLIF_BACSU -            536     0.007   16.0   0.0   1   1   4.1e-05      0.05   13.2   0.0     8    53   442   487   436   524 0.73 Leucine-rich repeat family 19 TM domain
DUF4179              PF13786.1     94 sp|P23447|FLIF_BACSU -            536     0.029   14.6   3.2   1   1   0.00015      0.18   12.0   0.2     4    39    17    57    14    80 0.61 Domain of unknown function (DUF4179)
DUF2970              PF11174.3     56 sp|P23447|FLIF_BACSU -            536      0.87    9.2   5.6   2   2   0.00017      0.21   11.1   0.5    30    51   450   471   440   473 0.89 Protein of unknown function (DUF2970)
FliG_N               PF14842.1    108 sp|P23448|FLIG_BACSU -            338   1.4e-49  166.7  10.9   1   3   4.3e-43   1.3e-39  134.6   0.5     2   108     6   112     5   112 0.99 FliG N-terminal domain
FliG_N               PF14842.1    108 sp|P23448|FLIG_BACSU -            338   1.4e-49  166.7  10.9   2   3   1.7e-11   4.9e-08   33.0   0.1     8    84   131   210   129   227 0.87 FliG N-terminal domain
FliG_C               PF01706.11   110 sp|P23448|FLIG_BACSU -            338   8.9e-41  138.3   6.6   2   2     3e-44   8.9e-41  138.3   6.6     1   109   220   328   220   329 0.98 FliG C-terminal domain
FliG_M               PF14841.1     80 sp|P23448|FLIG_BACSU -            338     1e-31  108.7  11.3   3   4   4.6e-34   1.4e-30  105.1   1.9     1    79   118   196   118   197 0.97 FliG middle domain
MgtE_N               PF03448.12   102 sp|P23448|FLIG_BACSU -            338     1e-06   28.9  14.5   3   5     1e-07   0.00031   21.0   0.2     2    49   118   165   117   180 0.91 MgtE intracellular N domain
MgtE_N               PF03448.12   102 sp|P23448|FLIG_BACSU -            338     1e-06   28.9  14.5   4   5     5e-06     0.015   15.6   0.4     2    38   130   166   130   238 0.67 MgtE intracellular N domain
His_biosynth         PF00977.16   229 sp|P23448|FLIG_BACSU -            338   0.00099   18.4   1.2   1   1   3.3e-07   0.00099   18.4   1.2    39   171   158   285   144   286 0.77 Histidine biosynthesis protein
FliH                 PF02108.11   128 sp|P23449|FLIH_BACSU -            208   5.7e-13   48.8   0.2   1   1   3.9e-16   1.1e-12   47.8   0.2     5   128    69   194    63   194 0.89 Flagellar assembly protein FliH
DUF2312              PF10073.4     74 sp|P23449|FLIH_BACSU -            208     0.026   13.8   6.3   1   2   1.1e-05     0.032   13.5   4.4     4    42    13    52    10    96 0.86 Uncharacterized protein conserved in bacteria (DUF2312)
DUF2317              PF10079.4    542 sp|P23449|FLIH_BACSU -            208      0.66    8.5   9.2   1   1   0.00031      0.93    8.0   9.2   385   489    11   114     3   125 0.86 Uncharacterized protein conserved in bacteria (DUF2317)
ATP-synt_ab          PF00006.20   215 sp|P23445|FLII_BACSU -            438     7e-74  247.9   0.1   1   1   5.4e-77   1.2e-73  247.2   0.1     2   215   145   354   144   354 0.99 ATP synthase alpha/beta family, nucleotide-binding domain
ATP-synt_ab_N        PF02874.18    69 sp|P23445|FLII_BACSU -            438   3.6e-07   30.2   0.3   1   1   5.1e-10   1.1e-06   28.7   0.1     1    69    22    88    22    88 0.96 ATP synthase alpha/beta family, beta-barrel domain
ABC_tran             PF00005.22   137 sp|P23445|FLII_BACSU -            438   0.00027   21.2   0.0   1   1   2.9e-07   0.00062   20.0   0.0     6    48   153   195   150   270 0.80 ABC transporter
DUF258               PF03193.11   161 sp|P23445|FLII_BACSU -            438    0.0019   17.4   0.0   1   1   1.4e-06    0.0031   16.7   0.0    26    75   149   198   137   245 0.84 Protein of unknown function, DUF258
AAA_10               PF12846.2    304 sp|P23445|FLII_BACSU -            438    0.0084   15.5   0.1   1   1     1e-05     0.022   14.2   0.1     6    48   163   211   160   372 0.77 AAA-like domain
DUF87                PF01935.12   229 sp|P23445|FLII_BACSU -            438     0.018   14.8   0.2   1   1   1.5e-05     0.033   14.0   0.2    24    47   159   182   150   192 0.88 Domain of unknown function DUF87
AAA_22               PF13401.1    131 sp|P23445|FLII_BACSU -            438     0.091   12.9   0.0   1   1   0.00012      0.26   11.4   0.0     3    56   158   204   156   266 0.66 AAA domain
FliJ                 PF02050.11   123 sp|P20487|FLIJ_BACSU -            147   8.9e-20   70.9  23.1   1   1   4.7e-23   1.4e-19   70.3  23.1     1   123    19   142     6   142 0.97 Flagellar FliJ protein
Integrase_DNA        PF02920.10    67 sp|P20487|FLIJ_BACSU -            147    0.0092   15.3   3.6   1   1   3.1e-06    0.0092   15.3   3.6     4    67    50   110    47   110 0.87 DNA binding domain of tn916 integrase
PDDEXK_1             PF12705.2    257 sp|P20487|FLIJ_BACSU -            147      0.29   10.4   4.5   1   1   0.00011      0.34   10.2   4.5    15   123     3   109     2   135 0.70 PD-(D/E)XK nuclease superfamily
Flg_hook             PF02120.11    85 sp|P23451|FLIK_BACSU -            487   1.6e-18   66.1   0.7   2   2   8.4e-21   3.1e-17   62.0   0.0     9    83   368   442   360   444 0.92 Flagellar hook-length control protein FliK
G6PD_N               PF00479.17   183 sp|P23451|FLIK_BACSU -            487      0.12   12.5   3.3   2   2   6.2e-05      0.23   11.6   0.7    24   134   118   229   115   236 0.84 Glucose-6-phosphate dehydrogenase, NAD binding domain
CsbD                 PF05532.7     53 sp|P23451|FLIK_BACSU -            487       1.4    8.6   9.9   2   2   9.4e-06     0.035   13.7   1.9    18    51   445   478   444   479 0.95 CsbD-like
Pup                  PF05639.6     69 sp|P23451|FLIK_BACSU -            487         2    9.0   8.4   2   2   7.7e-05      0.28   11.6   1.5    21    51   451   481   438   487 0.79 Pup-like protein
FliL                 PF03748.9     99 sp|P23452|FLIL_BACSU -            140   1.4e-22   79.5   2.4   1   1   1.1e-25     2e-22   79.0   2.4     3    99    47   140    45   140 0.97 Flagellar basal body-associated protein FliL
DUF3139              PF11337.3     85 sp|P23452|FLIL_BACSU -            140   8.5e-06   25.9   5.9   1   3   6.4e-09   1.2e-05   25.4   1.6     1    45     1    45     1    89 0.88 Protein of unknown function (DUF3139)
DUF4327              PF14217.1     68 sp|P23452|FLIL_BACSU -            140     0.022   14.5   0.4   1   1   2.8e-05     0.052   13.3   0.1    40    61    75    96    39   101 0.84 Domain of unknown function (DUF4327)
DUF4097              PF13349.1    166 sp|P23452|FLIL_BACSU -            140      0.06   12.8   7.4   1   2   4.8e-05     0.088   12.3   6.6     1    67     3    61     3   120 0.67 Domain of unknown function (DUF4097)
4HB_MCP_1            PF12729.2    181 sp|P23452|FLIL_BACSU -            140       0.1   11.9   7.0   1   1    0.0001      0.19   11.0   6.9     4    83     1    83     1   129 0.70 Four helix bundle sensory module for signal transduction
ABC2_membrane_3      PF12698.2    344 sp|P23452|FLIL_BACSU -            140       0.1   11.6   0.7   1   1   6.1e-05      0.11   11.4   0.7     2    79     4    86     3   138 0.67 ABC-2 family transporter protein
PLDc_N               PF13396.1     46 sp|P23452|FLIL_BACSU -            140      0.16   11.6   6.1   1   1   0.00014      0.26   10.9   6.1    24    46     8    30     5    30 0.90 Phospholipase_D-nuclease N-terminal
FliM                 PF02154.10   192 sp|P23453|FLIM_BACSU -            332   2.7e-83  278.3   2.9   1   1   4.8e-87   3.6e-83  277.9   2.9     1   192    40   230    40   230 1.00 Flagellar motor switch protein FliM
SpoA                 PF01052.15    77 sp|P23453|FLIM_BACSU -            332   1.6e-20   72.4   0.2   1   1     4e-24     3e-20   71.5   0.2     1    72   251   322   251   324 0.97 Surface presentation of antigens (SPOA)
FliP                 PF00813.15   194 sp|P35528|FLIP_BACSU -            221   1.9e-83  278.9  18.4   1   1     3e-87   2.3e-83  278.7  18.4     1   193    25   217    25   218 0.99 FliP family
Glyco_transf_8       PF01501.15   250 sp|P35528|FLIP_BACSU -            221     0.082   12.2   0.0   1   1   1.8e-05      0.13   11.5   0.0    28    94    62   138    36   145 0.82 Glycosyl transferase family 8
Bac_export_3         PF01313.14    76 sp|P35535|FLIQ_BACSU -             89   1.1e-31  108.3  11.0   1   1   4.2e-35   1.2e-31  108.1  11.0     2    76     5    79     4    79 0.97 Bacterial export proteins, family 3
TM_helix             PF05552.7     53 sp|P35535|FLIQ_BACSU -             89     0.023   14.3   0.5   2   2   7.8e-06     0.023   14.3   0.5     2    36    39    75    38    84 0.79 Conserved TM helix
VMA21                PF09446.5     66 sp|P35535|FLIQ_BACSU -             89     0.058   13.3   4.3   1   1   3.2e-05     0.094   12.6   4.3    10    61    14    65     6    66 0.93 VMA21-like domain
DUF420               PF04238.7    133 sp|P35535|FLIQ_BACSU -             89      0.13   12.1   4.4   1   2    0.0001       0.3   11.0   0.5    62   102     3    43     1    53 0.89 Protein of unknown function (DUF420)
zf-DHHC              PF01529.15   174 sp|P35535|FLIQ_BACSU -             89      0.68    9.3   3.8   1   1   0.00026      0.77    9.1   3.8    93   157    14    77     6    86 0.75 DHHC palmitoyltransferase
Bac_export_1         PF01311.15   249 sp|P35537|FLIR_BACSU -            259   1.2e-82  276.9  25.9   1   1   1.8e-86   1.4e-82  276.7  25.9     2   248     3   249     2   250 0.99 Bacterial export proteins, family 1
DUF1443              PF07280.6     43 sp|P35537|FLIR_BACSU -            259      0.17   11.4   0.3   1   2   2.3e-05      0.17   11.4   0.3     3    35   119   152   117   154 0.84 Protein of unknown function (DUF1443)
FliS                 PF02561.9    122 sp|P39739|FLIS_BACSU -            133   7.5e-48  161.4   1.9   1   1   1.1e-51   8.5e-48  161.2   1.9     2   122     4   122     3   122 0.98 Flagellar protein FliS
DUF1313              PF07011.6     89 sp|P39739|FLIS_BACSU -            133     0.035   13.7   0.9   1   1   7.2e-06     0.053   13.1   0.9    27    78    36    87    28   100 0.81 Protein of unknown function (DUF1313)
FliT                 PF05400.8     84 sp|P39740|FLIT_BACSU -            113   4.6e-10   39.7   4.3   1   1   7.7e-14   5.7e-10   39.4   4.3     3    84    20    95     5    95 0.95 Flagellar protein FliT
IFP_35_N             PF07334.8     76 sp|P39740|FLIT_BACSU -            113     0.087   12.7   2.3   2   2   7.6e-05      0.56   10.2   0.8     5    29    67    88    65    95 0.88 Interferon-induced 35 kDa protein (IFP 35) N-terminus
FliW                 PF02623.10   121 sp|P96503|FLIW_BACSU -            143     2e-44  150.0   0.9   1   1   1.6e-48   2.4e-44  149.7   0.9     1   120    19   138    19   139 0.99 FliW protein
CheC                 PF04509.7     38 sp|P24073|FLIY_BACSU -            378   2.3e-33  113.6   2.8   1   2   2.7e-19     1e-15   57.1   0.2     1    36    36    71    36    73 0.97 CheC-like family
CheC                 PF04509.7     38 sp|P24073|FLIY_BACSU -            378   2.3e-33  113.6   2.8   2   2   4.3e-19   1.6e-15   56.5   0.2     1    37   133   169   133   170 0.96 CheC-like family
SpoA                 PF01052.15    77 sp|P24073|FLIY_BACSU -            378   4.4e-21   74.2   1.7   1   1   2.4e-24   8.8e-21   73.3   1.7     4    76   298   370   296   371 0.96 Surface presentation of antigens (SPOA)
CheX                 PF13690.1     94 sp|P24073|FLIY_BACSU -            378   1.4e-08   34.4   1.0   1   3   3.2e-07    0.0012   18.6   0.0    36    91    31    90    12    93 0.79 Chemotaxis phosphatase CheX
CheX                 PF13690.1     94 sp|P24073|FLIY_BACSU -            378   1.4e-08   34.4   1.0   2   3   1.3e-05     0.047   13.5   0.1    11    72    98   168    88   170 0.77 Chemotaxis phosphatase CheX
FliM                 PF02154.10   192 sp|P24073|FLIY_BACSU -            378   2.6e-07   30.5   0.1   2   2     9e-10   3.3e-06   26.8   0.0    30   172    54   200    51   221 0.80 Flagellar motor switch protein FliM
DUF3816              PF12822.2    172 sp|P50726|FMNP_BACSU -            190   2.2e-24   86.2  25.1   1   1   8.6e-28   2.6e-24   86.0  25.1     1   171     4   173     4   174 0.92 Protein of unknown function (DUF3816)
ECF-ribofla_trS      PF07155.7    169 sp|P50726|FMNP_BACSU -            190   1.2e-07   31.5  16.7   1   1   4.9e-11   1.5e-07   31.3  16.7     3   168     2   178     1   179 0.83 ECF-type riboflavin transporter, S component
5TM-5TMR_LYT         PF07694.7    169 sp|P50726|FMNP_BACSU -            190   1.2e-05   24.6  16.3   1   1   5.9e-09   1.7e-05   24.1  16.3    17   164     4   172     1   177 0.64 5TMR of 5TMR-LYT
Thia_YuaJ            PF09515.5    177 sp|P50726|FMNP_BACSU -            190     0.017   14.9  17.5   1   1   1.3e-05     0.039   13.7  17.5     1   127     6   132     6   181 0.76 Thiamine transporter protein (Thia_YuaJ)
DUF2929              PF11151.3     57 sp|P50726|FMNP_BACSU -            190     0.038   14.0   0.4   3   3   1.3e-05     0.038   14.0   0.4    28    54   157   183   150   186 0.88 Protein of unknown function (DUF2929)
Formyl_trans_N       PF00551.14   181 sp|P94463|FMT_BACSU  -            317     1e-41  142.4   0.0   1   1     4e-45   1.5e-41  141.9   0.0     2   181     3   181     2   181 0.98 Formyl transferase
Formyl_trans_C       PF02911.13   100 sp|P94463|FMT_BACSU  -            317   9.4e-33  112.2   0.0   1   1   4.2e-36   1.6e-32  111.5   0.0     2    99   205   302   204   303 0.97 Formyl transferase, C-terminal domain
DUF3982              PF13138.1     73 sp|P94463|FMT_BACSU  -            317    0.0014   18.4   0.3   1   2   0.00017      0.63    9.9   0.1     8    55   133   180   130   186 0.84 Protein of unknown function (DUF3982)
Peripla_BP_2         PF01497.13   238 sp|P94463|FMT_BACSU  -            317     0.034   13.2   0.0   1   1   1.6e-05     0.058   12.5   0.0    52    70    71    89    41   108 0.85 Periplasmic binding protein
FolB                 PF02152.13   113 sp|P28823|FOLB_BACSU -            120   1.5e-31  108.8   0.0   1   1   1.1e-35   1.7e-31  108.7   0.0     1   113     4   117     4   117 0.99 Dihydroneopterin aldolase
Mur_ligase_M         PF08245.7    188 sp|Q05865|FOLC_BACSU -            430   2.2e-16   60.4   0.3   1   1   1.3e-19   6.3e-16   58.9   0.3     1   188    46   274    46   274 0.82 Mur ligase middle domain
Mur_ligase_C         PF02875.16    91 sp|Q05865|FOLC_BACSU -            430   1.1e-11   44.6   0.0   1   1   4.6e-15   2.3e-11   43.5   0.0     1    85   299   376   299   381 0.93 Mur ligase family, glutamate ligase domain
DUF3670              PF12419.3    141 sp|Q05865|FOLC_BACSU -            430    0.0037   16.7   0.0   1   1   1.6e-06    0.0081   15.5   0.0    63   104    71   112    48   123 0.86 SNF2 Helicase protein
THF_DHG_CYH_C        PF02882.14   161 sp|P54382|FOLD_BACSU -            283     4e-75  250.3   1.8   1   1   8.8e-79   6.5e-75  249.6   1.8     1   160   123   281   123   282 0.99 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain
THF_DHG_CYH          PF00763.18   117 sp|P54382|FOLD_BACSU -            283   6.3e-44  148.7   0.7   1   1   1.3e-47   9.8e-44  148.1   0.2     2   117     5   120     4   120 0.99 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain
Glyoxalase           PF00903.20   128 sp|O31817|FOSB_BACSU -            144   1.3e-16   60.6   0.2   1   1   2.6e-20   1.9e-16   60.1   0.2     1   128     5   117     5   117 0.93 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily
Glyoxalase_2         PF12681.2    108 sp|O31817|FOSB_BACSU -            144     2e-13   50.8   0.0   1   1   3.6e-17   2.7e-13   50.4   0.0     2   107    12   117    11   118 0.83 Glyoxalase-like domain
Fapy_DNA_glyco       PF01149.19   116 sp|O34403|FPG_BACSU  -            276   7.1e-34  116.6   1.5   1   1   5.1e-37   9.4e-34  116.2   0.4     1   115     2   117     2   118 0.96 Formamidopyrimidine-DNA glycosylase N-terminal domain
H2TH                 PF06831.9     93 sp|O34403|FPG_BACSU  -            276   4.5e-32  109.6   0.0   1   1   4.3e-35     8e-32  108.8   0.0     1    91   134   224   134   226 0.98 Formamidopyrimidine-DNA glycosylase H2TH domain
zf-FPG_IleRS         PF06827.9     30 sp|O34403|FPG_BACSU  -            276   6.5e-10   38.4   1.3   1   1   7.7e-13   1.4e-09   37.3   1.3     2    28   247   273   246   275 0.96 Zinc finger found in FPG and IleRS
FbpA                 PF05833.6    455 sp|O34403|FPG_BACSU  -            276   1.2e-07   30.6   0.0   1   1   9.1e-11   1.7e-07   30.1   0.0   160   282   129   254   124   259 0.70 Fibronectin-binding protein A N-terminus (FbpA)
Ribosomal_S13        PF00416.17   107 sp|O34403|FPG_BACSU  -            276     0.026   14.9   0.1   1   1   2.5e-05     0.047   14.1   0.1    10    65   156   214   148   244 0.76 Ribosomal protein S13/S18
YwqJ-deaminase       PF14431.1    126 sp|O34403|FPG_BACSU  -            276     0.052   13.4   0.3   1   1   9.2e-05      0.17   11.7   0.3    47   123   189   258   146   261 0.66 YwqJ-like deaminase
MafB19-deam          PF14437.1    146 sp|O34403|FPG_BACSU  -            276     0.087   12.4   1.0   1   1   0.00038      0.71    9.5   1.0    70   100   192   224   176   262 0.82 MafB19-like deaminase
PfkB                 PF00294.19   301 sp|O32153|FRLD_BACSU -            284     2e-41  142.1   0.2   1   1   3.5e-45   2.6e-41  141.7   0.2    26   294    12   263     1   265 0.86 pfkB family carbohydrate kinase
XdhC_C               PF13478.1    136 sp|O32153|FRLD_BACSU -            284      0.11   12.7   0.0   1   1   3.3e-05      0.25   11.6   0.0    68   119    27    79    23    84 0.87 XdhC Rossmann domain
FtsA                 PF14450.1    120 sp|P28264|FTSA_BACSU -            440   1.7e-52  176.3   5.8   1   2     1e-26   2.2e-23   82.3   1.0     2   118     8   192     7   194 0.97 Cell division protein FtsA
FtsA                 PF14450.1    120 sp|P28264|FTSA_BACSU -            440   1.7e-52  176.3   5.8   2   2   4.8e-31     1e-27   96.3   0.3     1   120   204   367   204   367 0.98 Cell division protein FtsA
SHS2_FTSA            PF02491.15    80 sp|P28264|FTSA_BACSU -            440     4e-25   87.5   3.2   1   2   1.7e-27   3.6e-24   84.4   2.1     2    80    81   161    80   161 0.97 SHS2 domain inserted in FTSA
MreB_Mbl             PF06723.8    327 sp|P28264|FTSA_BACSU -            440   4.8e-13   48.3   8.7   3   3   3.3e-16   7.1e-13   47.8   2.3   126   305   183   350   161   358 0.84 MreB/Mbl protein
PilM_2               PF11104.3    340 sp|P28264|FTSA_BACSU -            440   2.7e-10   39.6   3.8   2   2   5.3e-12   1.1e-08   34.3   0.1   171   307   193   351   171   354 0.78 Type IV pilus assembly protein PilM;
EutA                 PF06277.6    473 sp|P28264|FTSA_BACSU -            440   9.2e-09   34.4   7.8   2   2   5.7e-12   1.2e-08   34.0   0.6   131   206   189   265   173   329 0.85 Ethanolamine utilisation protein EutA
MutL                 PF13941.1    457 sp|P28264|FTSA_BACSU -            440    0.0012   17.3   2.0   2   2   0.00016      0.35    9.1   0.5   237   346   192   296   178   312 0.61 MutL protein
Ppx-GppA             PF02541.11   285 sp|P28264|FTSA_BACSU -            440     0.013   14.7   0.3   1   1   1.7e-05     0.036   13.2   0.2   116   168   206   258   190   293 0.85 Ppx/GppA phosphatase family
ABC_tran             PF00005.22   137 sp|O34814|FTSE_BACSU -            228   7.1e-39  133.2   0.0   1   1   2.3e-41     1e-38  132.7   0.0     1   136    18   165    18   166 0.89 ABC transporter
AAA_21               PF13304.1    303 sp|O34814|FTSE_BACSU -            228   1.4e-11   44.9   0.0   1   2   0.00015     0.062   13.2   0.1     4    21    33    50    30    78 0.77 AAA domain
AAA_21               PF13304.1    303 sp|O34814|FTSE_BACSU -            228   1.4e-11   44.9   0.0   2   2   9.6e-10   4.1e-07   30.2   0.0   219   303   100   201    51   201 0.72 AAA domain
AAA_33               PF13671.1    143 sp|O34814|FTSE_BACSU -            228   1.5e-05   24.9   0.0   1   1   8.3e-08   3.5e-05   23.7   0.0     2   118    31   206    30   224 0.71 AAA domain
SMC_N                PF02463.14   220 sp|O34814|FTSE_BACSU -            228   3.6e-05   23.1   0.3   1   1   3.4e-07   0.00014   21.1   0.3    10   208    15   206     7   215 0.68 RecF/RecN/SMC N terminal domain
AAA_22               PF13401.1    131 sp|O34814|FTSE_BACSU -            228   0.00019   21.5   0.1   1   1   2.2e-06   0.00094   19.3   0.1     5    37    29    80    25   203 0.58 AAA domain
AAA_15               PF13175.1    415 sp|O34814|FTSE_BACSU -            228   0.00048   19.2   0.0   2   2    0.0009      0.38    9.7   0.0   365   414   154   199   141   200 0.87 AAA ATPase domain
Miro                 PF08477.8    119 sp|O34814|FTSE_BACSU -            228   0.00059   20.3   0.2   1   1   4.3e-06    0.0018   18.7   0.0     2    55    31    86    31   103 0.69 Miro-like protein
DUF258               PF03193.11   161 sp|O34814|FTSE_BACSU -            228   0.00067   18.8   0.0   1   1     3e-06    0.0013   17.9   0.0    30    66    22    59     4    82 0.81 Protein of unknown function, DUF258
NB-ARC               PF00931.17   287 sp|O34814|FTSE_BACSU -            228   0.00095   18.1   0.4   1   2   0.00015     0.065   12.0   0.0    21    46    30    56    22    73 0.90 NB-ARC domain
AAA_18               PF13238.1    129 sp|O34814|FTSE_BACSU -            228   0.00099   19.4   0.1   1   2   0.00087      0.37   11.1   0.0     1    27    31    61    31    90 0.70 AAA domain
AAA_29               PF13555.1     62 sp|O34814|FTSE_BACSU -            228    0.0015   18.0   0.0   1   1   6.4e-06    0.0027   17.1   0.0    15    40    21    45    16    49 0.83 P-loop containing region of AAA domain
AAA_16               PF13191.1    185 sp|O34814|FTSE_BACSU -            228    0.0021   18.0   0.0   1   1   7.6e-06    0.0032   17.4   0.0    19    49    23    53    16   192 0.87 AAA ATPase domain
AAA_14               PF13173.1    128 sp|O34814|FTSE_BACSU -            228    0.0027   17.6   0.0   1   1   9.8e-06    0.0042   16.9   0.0     3    47    29    73    27   133 0.86 AAA domain
MMR_HSR1             PF01926.18   116 sp|O34814|FTSE_BACSU -            228    0.0031   17.4   0.8   1   1   1.9e-05    0.0081   16.1   0.8     2    82    31   188    30   213 0.47 50S ribosome-binding GTPase
MobB                 PF03205.9    140 sp|O34814|FTSE_BACSU -            228    0.0035   17.0   0.1   1   1   2.7e-05     0.011   15.3   0.0     3    25    31    53    29    75 0.81 Molybdopterin guanine dinucleotide synthesis protein B
AAA_10               PF12846.2    304 sp|O34814|FTSE_BACSU -            228     0.004   16.6   0.0   1   1   2.1e-05    0.0088   15.5   0.0     6    33    33    60    29    68 0.84 AAA-like domain
Arch_ATPase          PF01637.13   234 sp|O34814|FTSE_BACSU -            228     0.011   15.4   0.3   1   1   4.6e-05     0.019   14.6   0.2    19    65    27    74    15   193 0.79 Archaeal ATPase
AAA_25               PF13481.1    194 sp|O34814|FTSE_BACSU -            228     0.015   14.7   0.1   1   2   0.00026      0.11   11.8   0.0    30    50    25    45     8    49 0.88 AAA domain
RNA_helicase         PF00910.17   107 sp|O34814|FTSE_BACSU -            228     0.015   15.4   0.1   1   1    0.0002     0.086   13.0   0.0     1    21    31    51    31    79 0.81 RNA helicase
AAA_17               PF13207.1    121 sp|O34814|FTSE_BACSU -            228     0.017   15.9   0.2   1   1   8.4e-05     0.036   14.8   0.2     2    19    31    48    30    79 0.88 AAA domain
Septin               PF00735.13   281 sp|O34814|FTSE_BACSU -            228      0.02   13.9   0.0   1   1   7.4e-05     0.031   13.2   0.0     7    47    31    74    26   138 0.74 Septin
Zeta_toxin           PF06414.7    201 sp|O34814|FTSE_BACSU -            228      0.03   13.4   0.0   1   1   0.00021     0.087   11.9   0.0    18    52    30    65    26    71 0.83 Zeta toxin
cobW                 PF02492.14   178 sp|O34814|FTSE_BACSU -            228     0.031   13.7   0.2   1   1   0.00029      0.12   11.7   0.2     3    36    31    63    29   216 0.73 CobW/HypB/UreG, nucleotide-binding domain
Dynamin_N            PF00350.18   168 sp|O34814|FTSE_BACSU -            228     0.033   14.0   0.1   1   1   9.4e-05      0.04   13.7   0.1     1    29    31    59    31   207 0.89 Dynamin family
AAA_30               PF13604.1    196 sp|O34814|FTSE_BACSU -            228     0.037   13.6   0.1   1   1   0.00079      0.33   10.4   0.0    14    38    24    48    20    61 0.83 AAA domain
SbcCD_C              PF13558.1     90 sp|O34814|FTSE_BACSU -            228     0.039   13.8   0.0   1   1    0.0011      0.49   10.3   0.0    61    89   153   181   118   182 0.80 Putative exonuclease SbcCD, C subunit
ATP-synt_ab          PF00006.20   215 sp|O34814|FTSE_BACSU -            228      0.04   13.3   0.0   1   1   0.00019     0.079   12.4   0.0     3    95    15   211    13   222 0.76 ATP synthase alpha/beta family, nucleotide-binding domain
ATP_bind_1           PF03029.12   238 sp|O34814|FTSE_BACSU -            228     0.047   13.2   0.1   1   1   0.00067      0.28   10.6   0.0     1    18    33    50    33    62 0.84 Conserved hypothetical ATP binding protein
Spore_YhcN_YlaJ      PF09580.5    177 sp|O34814|FTSE_BACSU -            228     0.053   13.6   2.2   1   1   0.00018     0.076   13.1   2.2    90   150   146   205   142   218 0.85 Sporulation lipoprotein YhcN/YlaJ (Spore_YhcN_YlaJ)
AAA                  PF00004.24   132 sp|O34814|FTSE_BACSU -            228     0.055   13.6   0.1   1   1   0.00048       0.2   11.8   0.0     1    23    31    53    31   126 0.72 ATPase family associated with various cellular activities (AAA)
AAA_32               PF13654.1    509 sp|O34814|FTSE_BACSU -            228     0.061   11.9   0.0   1   1   0.00023     0.095   11.3   0.0    28    55    26    53    11    62 0.80 AAA domain
Sigma54_activat      PF00158.21   168 sp|O34814|FTSE_BACSU -            228     0.068   12.6   0.1   1   1   0.00037      0.16   11.4   0.0    24    53    30    59    11    74 0.78 Sigma-54 interaction domain
AAA_23               PF13476.1    202 sp|O34814|FTSE_BACSU -            228     0.084   13.1   0.4   1   1   0.00024       0.1   12.9   0.4    21    39    30    48    13   185 0.92 AAA domain
UPF0079              PF02367.12   123 sp|O34814|FTSE_BACSU -            228     0.094   12.3   0.0   1   1   0.00052      0.22   11.1   0.0    11    37    24    50    18    67 0.87 Uncharacterised P-loop hydrolase UPF0079
Peptidase_M41        PF01434.13   213 sp|P37476|FTSH_BACSU -            637   1.7e-89  298.8   0.3   1   1   4.7e-92   2.8e-89  298.2   0.3     3   213   392   600   390   600 0.99 Peptidase family M41
AAA                  PF00004.24   132 sp|P37476|FTSH_BACSU -            637   3.9e-45  153.2   0.0   1   1   1.7e-47     1e-44  151.9   0.0     1   131   197   329   197   330 0.97 ATPase family associated with various cellular activities (AAA)
FtsH_ext             PF06480.10   110 sp|P37476|FTSH_BACSU -            637   5.7e-15   55.4   1.2   1   2   1.3e-14   7.9e-12   45.3   0.5     2   108     9   103     8   105 0.84 FtsH Extracellular
AAA_5                PF07728.9    139 sp|P37476|FTSH_BACSU -            637   1.8e-05   24.5   0.0   1   1   2.4e-07   0.00014   21.5   0.0     1   136   196   317   196   319 0.83 AAA domain (dynein-related subfamily)
AAA_17               PF13207.1    121 sp|P37476|FTSH_BACSU -            637   8.2e-05   23.4   1.1   1   1   5.6e-07   0.00033   21.4   0.0     2    58   197   263   197   448 0.76 AAA domain
AAA_22               PF13401.1    131 sp|P37476|FTSH_BACSU -            637   9.7e-05   22.5   0.5   1   2   0.00015     0.088   12.9   0.1     7    26   197   216   194   312 0.80 AAA domain
TIP49                PF06068.8    398 sp|P37476|FTSH_BACSU -            637   0.00015   20.6   0.5   1   1   7.7e-07   0.00046   19.0   0.0    51    88   195   230   176   237 0.91 TIP49 C-terminus
IstB_IS21            PF01695.12   178 sp|P37476|FTSH_BACSU -            637    0.0009   18.7   0.0   1   1   7.9e-06    0.0047   16.3   0.0    48    71   195   218   147   262 0.89 IstB-like ATP binding protein
RuvB_N               PF05496.7    234 sp|P37476|FTSH_BACSU -            637    0.0011   18.0   0.0   1   1   5.3e-06    0.0032   16.5   0.0    52    85   196   229   148   269 0.71 Holliday junction DNA helicase ruvB N-terminus
AAA_16               PF13191.1    185 sp|P37476|FTSH_BACSU -            637    0.0012   18.8   0.3   1   2   2.3e-05     0.014   15.4   0.2    23    45   193   215   167   231 0.85 AAA ATPase domain
Zeta_toxin           PF06414.7    201 sp|P37476|FTSH_BACSU -            637    0.0023   17.0   0.0   1   1   1.1e-05    0.0063   15.6   0.0    16    54   194   231   181   253 0.86 Zeta toxin
AAA_19               PF13245.1     76 sp|P37476|FTSH_BACSU -            637    0.0024   17.5   1.7   1   1   1.1e-05    0.0068   16.1   0.9    10    32   195   215   187   221 0.71 Part of AAA domain
AAA_14               PF13173.1    128 sp|P37476|FTSH_BACSU -            637    0.0028   17.5   0.0   1   1   3.2e-05     0.019   14.8   0.0     5    81   197   285   194   313 0.69 AAA domain
AAA_33               PF13671.1    143 sp|P37476|FTSH_BACSU -            637     0.003   17.4   0.1   1   1   2.2e-05     0.013   15.3   0.0     2    25   197   222   197   260 0.85 AAA domain
AAA_25               PF13481.1    194 sp|P37476|FTSH_BACSU -            637    0.0043   16.4   1.2   1   2   5.9e-05     0.035   13.5   0.3    30    57   193   218   166   236 0.77 AAA domain
Mg_chelatase         PF01078.16   207 sp|P37476|FTSH_BACSU -            637    0.0092   15.1   0.0   1   1   3.1e-05     0.018   14.1   0.0    23    42   195   214   177   217 0.81 Magnesium chelatase, subunit ChlI
S_tail_recep_bd      PF14928.1    120 sp|P37476|FTSH_BACSU -            637     0.044   13.9   0.1   1   1   0.00023      0.14   12.4   0.1    24   108   492   576   484   582 0.83 Short tail fibre protein receptor-binding domain
AAA_18               PF13238.1    129 sp|P37476|FTSH_BACSU -            637     0.047   13.9   1.4   1   1   0.00044      0.26   11.5   0.0     1    22   197   218   197   305 0.71 AAA domain
YMF19                PF02326.10    86 sp|P37476|FTSH_BACSU -            637     0.048   14.2   0.0   1   1   0.00028      0.17   12.4   0.0     5    73   109   176   108   184 0.80 Plant ATP synthase F0
DUF815               PF05673.8    250 sp|P37476|FTSH_BACSU -            637     0.069   12.0   0.0   1   1   0.00028      0.16   10.8   0.0    20    76   153   217   140   234 0.77 Protein of unknown function (DUF815)
PhoH                 PF02562.11   205 sp|P37476|FTSH_BACSU -            637     0.071   12.3   0.2   1   1   0.00025      0.15   11.2   0.2    22    41   197   216   188   220 0.88 PhoH-like protein
DsbC_N               PF10411.4     57 sp|P37476|FTSH_BACSU -            637     0.076   12.2   0.1   1   1   0.00033      0.19   10.9   0.1    10    29    45    64    39    66 0.87 Disulfide bond isomerase protein N-terminus
AAA_28               PF13521.1    163 sp|P37476|FTSH_BACSU -            637      0.12   12.3   0.2   1   1   0.00049      0.29   11.0   0.0     2    32   197   228   196   250 0.80 AAA domain
DivIC                PF04977.10    80 sp|Q07867|FTSL_BACSU -            117   6.5e-07   28.7   1.2   1   1   4.2e-10     1e-06   28.1   1.2     1    65    41   103    41   115 0.92 Septum formation initiator
FtsL                 PF04999.8     97 sp|Q07867|FTSL_BACSU -            117    0.0025   17.4   0.4   1   1   1.5e-06    0.0038   16.9   0.4    12    85    33   108    20   116 0.81 Cell division protein FtsL
DUF4446              PF14584.1    152 sp|Q07867|FTSL_BACSU -            117    0.0082   15.9   0.6   1   1   4.2e-06      0.01   15.6   0.6    12    74    36    98    26   113 0.84 Protein of unknown function (DUF4446)
DUF4577              PF15145.1    128 sp|Q07867|FTSL_BACSU -            117     0.009   15.9   0.0   1   1     4e-06    0.0098   15.8   0.0    38   114    12    88     1   103 0.78 Domain of unknown function (DUF4577)
RELT                 PF12606.3     50 sp|Q07867|FTSL_BACSU -            117     0.093   11.8   0.1   1   1   8.5e-05      0.21   10.7   0.1     8    31    38    62    35    82 0.73 Tumour necrosis factor receptor superfamily member 19
DUF454               PF04304.8     71 sp|Q07867|FTSL_BACSU -            117      0.18   11.8   1.2   2   2   0.00013      0.33   11.0   0.3    21    52    27    57    25    61 0.82 Protein of unknown function (DUF454)
FTSW_RODA_SPOVE      PF01098.14   359 sp|O07639|FTSW_BACSU -            403  1.1e-120  402.7  36.4   1   1  1.8e-124  1.3e-120  402.4  36.4     2   358    12   376    11   377 0.98 Cell cycle protein
O-antigen_lig        PF13425.1    140 sp|O07639|FTSW_BACSU -            403   0.00016   21.6   8.9   3   4   2.1e-08   0.00016   21.6   8.9     9   140   153   296   146   299 0.52 O-antigen ligase like membrane protein
FtsX                 PF02687.16   121 sp|O34876|FTSX_BACSU -            296   1.7e-14   53.6  20.9   2   2     4e-18     3e-14   52.8  15.3     2   118   174   295   173   296 0.83 FtsX-like permease family
DUF2976              PF11190.3     87 sp|O34876|FTSX_BACSU -            296     0.071   12.6   0.2   1   4   9.5e-06     0.071   12.6   0.2    56    81    17    42     6    45 0.90 Protein of unknown function (DUF2976)
SRP54                PF00448.17   196 sp|P51835|FTSY_BACSU -            329   1.3e-81  272.7   1.0   1   1   7.4e-84   2.4e-81  271.8   1.0     2   195   121   320   120   321 0.99 SRP54-type protein, GTPase domain
SRP54_N              PF02881.14    75 sp|P51835|FTSY_BACSU -            329   4.1e-19   68.4   3.3   1   1   1.3e-21   4.1e-19   68.4   3.3     2    75    23    99    22    99 0.97 SRP54-type protein, helical bundle domain
ArgK                 PF03308.11   267 sp|P51835|FTSY_BACSU -            329   2.4e-05   23.2   1.3   1   1   3.9e-07   0.00013   20.8   1.0    17    66   108   157    98   242 0.82 ArgK protein
AAA_16               PF13191.1    185 sp|P51835|FTSY_BACSU -            329   6.1e-05   23.0   0.3   1   1   5.6e-07   0.00018   21.5   0.1    19   120   115   232   108   289 0.62 AAA ATPase domain
AAA_22               PF13401.1    131 sp|P51835|FTSY_BACSU -            329   9.7e-05   22.5   0.9   1   1   1.5e-06    0.0005   20.2   0.2     6   112   122   231   116   247 0.63 AAA domain
MobB                 PF03205.9    140 sp|P51835|FTSY_BACSU -            329   0.00026   20.6   1.4   1   1   2.4e-06   0.00077   19.1   0.9     2    32   122   152   121   158 0.92 Molybdopterin guanine dinucleotide synthesis protein B
AAA_30               PF13604.1    196 sp|P51835|FTSY_BACSU -            329   0.00061   19.4   1.5   1   1   5.1e-06    0.0017   18.0   1.5    19    65   121   167   107   233 0.68 AAA domain
Zeta_toxin           PF06414.7    201 sp|P51835|FTSY_BACSU -            329    0.0012   17.9   0.2   1   1   8.6e-06    0.0028   16.7   0.2    14    56   118   162   107   242 0.65 Zeta toxin
APS_kinase           PF01583.15   157 sp|P51835|FTSY_BACSU -            329    0.0013   18.4   1.0   1   1   7.2e-06    0.0023   17.5   0.2     4    49   122   167   119   174 0.92 Adenylylsulphate kinase
ABC_tran             PF00005.22   137 sp|P51835|FTSY_BACSU -            329    0.0013   19.0   0.4   1   1   7.6e-06    0.0025   18.1   0.1    12    80   121   206   110   269 0.69 ABC transporter
DUF258               PF03193.11   161 sp|P51835|FTSY_BACSU -            329    0.0018   17.5   0.8   2   2   9.2e-05      0.03   13.5   0.2    18    66   102   151    86   161 0.77 Protein of unknown function, DUF258
Thymidylate_kin      PF02223.12   186 sp|P51835|FTSY_BACSU -            329    0.0038   16.6   3.2   2   2   4.8e-05     0.016   14.6   0.2     3    29   127   153   125   168 0.91 Thymidylate kinase
AAA_5                PF07728.9    139 sp|P51835|FTSY_BACSU -            329    0.0049   16.6   0.4   1   1   5.5e-05     0.018   14.7   0.0     2    36   123   158   122   236 0.75 AAA domain (dynein-related subfamily)
MMR_HSR1             PF01926.18   116 sp|P51835|FTSY_BACSU -            329    0.0049   16.8   0.9   1   1   3.1e-05      0.01   15.8   0.1     2    93   123   252   122   288 0.62 50S ribosome-binding GTPase
DUF2075              PF09848.4    352 sp|P51835|FTSY_BACSU -            329    0.0055   15.7   1.2   1   1   1.9e-05    0.0062   15.5   0.1     3   115   122   231   120   246 0.75 Uncharacterized conserved protein (DUF2075)
AAA_33               PF13671.1    143 sp|P51835|FTSY_BACSU -            329    0.0059   16.4   0.0   1   1   3.4e-05     0.011   15.6   0.0     1    37   122   163   122   258 0.65 AAA domain
CbiA                 PF01656.18   195 sp|P51835|FTSY_BACSU -            329    0.0074   15.7   3.5   1   1   0.00074      0.24   10.7   3.5     9   109   130   217   122   306 0.62 CobQ/CobB/MinD/ParA nucleotide binding domain
cobW                 PF02492.14   178 sp|P51835|FTSY_BACSU -            329     0.011   15.2   0.5   1   1   3.4e-05     0.011   15.2   0.5     2   105   122   228   121   282 0.73 CobW/HypB/UreG, nucleotide-binding domain
AAA                  PF00004.24   132 sp|P51835|FTSY_BACSU -            329     0.012   15.8   0.5   1   1   3.6e-05     0.012   15.8   0.5     1    35   123   159   123   274 0.70 ATPase family associated with various cellular activities (AAA)
NACHT                PF05729.7    166 sp|P51835|FTSY_BACSU -            329     0.015   14.9   0.7   1   1   0.00014     0.046   13.3   0.5     2    28   122   148   121   153 0.91 NACHT domain
AAA_17               PF13207.1    121 sp|P51835|FTSY_BACSU -            329     0.015   16.0   1.6   1   1   0.00013     0.042   14.6   0.2     1    32   122   157   122   246 0.61 AAA domain
AAA_28               PF13521.1    163 sp|P51835|FTSY_BACSU -            329     0.032   14.1   1.5   1   1    0.0004      0.13   12.2   0.7     2    80   123   210   122   215 0.55 AAA domain
AAA_14               PF13173.1    128 sp|P51835|FTSY_BACSU -            329     0.033   14.0   0.1   1   1   0.00034      0.11   12.4   0.0     3    35   121   154   119   200 0.81 AAA domain
DUF1002              PF06207.6    225 sp|P51835|FTSY_BACSU -            329     0.035   13.4   2.2   1   1   0.00016     0.051   12.8   1.0   139   188    53   102    31   117 0.76 Protein of unknown function (DUF1002)
AAA_25               PF13481.1    194 sp|P51835|FTSY_BACSU -            329     0.042   13.2   3.2   2   2   0.00037      0.12   11.7   0.1    34   155   121   215   110   238 0.74 AAA domain
Myb_DNA-bind_4       PF13837.1     90 sp|P51835|FTSY_BACSU -            329     0.043   13.9   0.7   1   1    0.0022      0.71   10.0   0.3    40    72    18    49     3    58 0.77 Myb/SANT-like DNA-binding domain
SPT16                PF08644.6    152 sp|P51835|FTSY_BACSU -            329     0.056   13.2   1.9   1   1   0.00035      0.11   12.2   1.9    74   129    61   115     6   120 0.78 FACT complex subunit (SPT16/CDC68)
TrwB_AAD_bind        PF10412.4    386 sp|P51835|FTSY_BACSU -            329     0.056   12.0   0.7   1   1    0.0004      0.13   10.8   0.2    18    48   123   153   110   158 0.91 Type IV secretion-system coupling protein DNA-binding domain
AAA_19               PF13245.1     76 sp|P51835|FTSY_BACSU -            329     0.056   13.2   2.9   1   1   0.00022     0.072   12.8   0.7    11    52   121   158   115   188 0.80 Part of AAA domain
NTPase_1             PF03266.10   168 sp|P51835|FTSY_BACSU -            329     0.059   13.0   6.7   1   2    0.0003     0.096   12.3   1.1     2    30   123   151   122   185 0.93 NTPase
KTI12                PF08433.5    270 sp|P51835|FTSY_BACSU -            329     0.067   12.3   0.7   1   1   0.00049      0.16   11.1   0.0     3    41   122   160   120   182 0.87 Chromatin associated protein KTI12
AAA_29               PF13555.1     62 sp|P51835|FTSY_BACSU -            329      0.11   12.0   0.1   1   1   0.00082      0.27   10.8   0.0    24    40   121   137   100   141 0.82 P-loop containing region of AAA domain
Arch_ATPase          PF01637.13   234 sp|P51835|FTSY_BACSU -            329      0.11   12.1   0.1   1   1   0.00035      0.11   12.1   0.1    15    54   115   154   108   251 0.73 Archaeal ATPase
AAA_18               PF13238.1    129 sp|P51835|FTSY_BACSU -            329      0.12   12.6   0.2   1   1   0.00038      0.12   12.6   0.2     1    23   123   148   123   174 0.80 AAA domain
Miro                 PF08477.8    119 sp|P51835|FTSY_BACSU -            329      0.13   12.7   1.9   1   1    0.0013      0.43   11.0   0.2     2    26   123   162   122   236 0.64 Miro-like protein
ATP_bind_1           PF03029.12   238 sp|P51835|FTSY_BACSU -            329      0.14   11.6   4.7   1   2    0.0028      0.89    9.0   0.4     2    27   126   151   125   155 0.91 Conserved hypothetical ATP binding protein
DUF1342              PF07072.6    211 sp|P51835|FTSY_BACSU -            329      0.18   11.4   1.8   2   2    0.0025      0.79    9.3   0.1    32    73   207   246   193   267 0.82 Protein of unknown function (DUF1342)
AAA_32               PF13654.1    509 sp|P51835|FTSY_BACSU -            329      0.18   10.4   6.0   1   2    0.0011      0.36    9.4   2.1   167   237    13    84     4   119 0.78 AAA domain
Apolipoprotein       PF01442.13   202 sp|P51835|FTSY_BACSU -            329      0.24   10.8   4.0   1   2     0.001      0.33   10.4   0.5    15    61     5    51     2   114 0.61 Apolipoprotein A1/A4/E domain
ArsA_ATPase          PF02374.10   305 sp|P51835|FTSY_BACSU -            329      0.27   10.2   5.9   1   1   0.00021     0.067   12.2   0.7     2    38   121   157   120   160 0.92 Anion-transporting ATPase
PIF1                 PF05970.9    364 sp|P51835|FTSY_BACSU -            329      0.32    9.8   4.0   1   1   0.00032       0.1   11.5   0.1    20   132   118   234   106   240 0.84 PIF1-like helicase
ResIII               PF04851.10   184 sp|P51835|FTSY_BACSU -            329      0.36   10.6   2.6   1   1    0.0028      0.91    9.3   0.2    11    70    95   167    85   228 0.76 Type III restriction enzyme, res subunit
Tubulin              PF00091.20   216 sp|P17865|FTSZ_BACSU -            382   3.5e-41  141.3   2.1   1   2   1.2e-44   3.5e-41  141.3   2.1     2   215    14   184    13   185 0.97 Tubulin/FtsZ family, GTPase domain
FtsZ_C               PF12327.3     95 sp|P17865|FTSZ_BACSU -            382   2.2e-32  110.9   4.5   1   1   7.4e-36   2.2e-32  110.9   4.5     1    94   222   315   222   316 0.99 FtsZ family, C-terminal domain
NmrA                 PF05368.8    233 sp|P17865|FTSZ_BACSU -            382     0.036   13.3   0.9   1   2    0.0003      0.88    8.7   0.1    53    93    84   124    30   128 0.73 NmrA-like family
Tubulin_2            PF13809.1    345 sp|P17865|FTSZ_BACSU -            382     0.075   11.9   5.2   2   2   0.00018      0.52    9.1   1.0   121   199    55   141    49   163 0.61 Tubulin like
Lyase_1              PF00206.15   312 sp|P07343|FUMC_BACSU -            462  3.6e-121  404.1   0.6   1   1  6.5e-125  4.8e-121  403.7   0.6     1   312    11   340    11   340 0.97 Lyase
FumaraseC_C          PF10415.4     55 sp|P07343|FUMC_BACSU -            462     5e-27   93.7   0.5   1   1   1.6e-30   1.2e-26   92.5   0.5     1    55   406   460   406   460 0.99 Fumarase C C-terminus
FUR                  PF01475.14   120 sp|P54574|FUR_BACSU  -            149   1.3e-40  138.0   0.4   1   1   1.2e-44   1.7e-40  137.6   0.4     2   119    15   136    14   137 0.97 Ferric uptake regulator family
TerD                 PF02342.13   186 sp|P80875|G16U_BACSU -            193   2.3e-64  216.1   0.2   1   1   1.7e-68   2.5e-64  216.0   0.2     1   186     1   192     1   192 0.99 TerD domain
Fe-ADH_2             PF13685.1    250 sp|P94527|G1PDH_BACSU -            394   1.6e-73  247.0   0.2   1   1     4e-77     2e-73  246.7   0.2     2   250    29   295    28   295 0.88 Iron-containing alcohol dehydrogenase
Fe-ADH               PF00465.14   366 sp|P94527|G1PDH_BACSU -            394     3e-13   49.1   0.2   1   1   8.9e-17   4.4e-13   48.6   0.2     3   349    26   369    25   384 0.73 Iron-containing alcohol dehydrogenase
DHQ_synthase         PF01761.15   261 sp|P94527|G1PDH_BACSU -            394   3.8e-09   35.8   0.0   1   2   3.4e-11   1.7e-07   30.4   0.0    16   178    93   245    78   250 0.83 3-dehydroquinate synthase
Ferritin             PF00210.19   142 sp|P80879|G20U_BACSU -            145   4.2e-26   91.4   4.1   1   1   6.3e-30   4.6e-26   91.2   4.1     1   136     6   144     6   145 0.96 Ferritin-like domain
DUF3352              PF11832.3    536 sp|P80879|G20U_BACSU -            145     0.092   11.0   0.0   1   1   1.5e-05      0.11   10.7   0.0   297   373    56   141    34   144 0.84 Protein of unknown function (DUF3352)
Gp_dh_C              PF02800.15   157 sp|P09124|G3P1_BACSU -            335     3e-74  247.7   0.0   1   1   1.7e-77   4.3e-74  247.1   0.0     1   157   157   313   157   313 1.00 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain
Gp_dh_N              PF00044.19   151 sp|P09124|G3P1_BACSU -            335   1.1e-61  207.2   1.2   1   1   7.8e-65   1.9e-61  206.4   1.2     1   151     3   152     3   152 0.99 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain
DapB_N               PF01113.15   124 sp|P09124|G3P1_BACSU -            335   5.4e-06   26.3   0.7   1   2   1.3e-08   3.1e-05   23.8   0.4     1   115     3   113     3   125 0.61 Dihydrodipicolinate reductase, N-terminus
2-Hacid_dh_C         PF02826.14   178 sp|P09124|G3P1_BACSU -            335     0.015   14.4   0.0   1   1   1.4e-05     0.034   13.3   0.0    38    72     4    39     2    56 0.79 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain
GFO_IDH_MocA         PF01408.17   120 sp|P09124|G3P1_BACSU -            335     0.069   13.6   0.0   1   1    0.0001      0.25   11.8   0.0     1    35     3    36     3    57 0.89 Oxidoreductase family, NAD-binding Rossmann fold
Gp_dh_C              PF02800.15   157 sp|O34425|G3P2_BACSU -            340   1.5e-69  232.4   0.1   1   1   8.4e-73   3.1e-69  231.4   0.1     1   157   157   313   157   313 1.00 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain
Gp_dh_N              PF00044.19   151 sp|O34425|G3P2_BACSU -            340   8.1e-59  197.9   1.5   1   2   4.3e-62   1.6e-58  196.9   0.5     1   151     3   152     3   152 0.99 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain
DapB_N               PF01113.15   124 sp|O34425|G3P2_BACSU -            340     0.025   14.4   1.5   1   2   2.5e-05     0.093   12.6   0.5     1    36     3    37     3   149 0.80 Dihydrodipicolinate reductase, N-terminus
NAD_binding_3        PF03447.11   117 sp|O34425|G3P2_BACSU -            340     0.042   14.2   0.2   1   1   3.8e-05      0.14   12.5   0.0     1    88     9   118     9   122 0.84 Homoserine dehydrogenase, NAD binding domain
G6PD_C               PF02781.11   294 sp|P54547|G6PD_BACSU -            489    5e-105  350.5   0.0   1   1  8.3e-109  6.1e-105  350.2   0.0     2   291   191   486   190   489 0.98 Glucose-6-phosphate dehydrogenase, C-terminal domain
G6PD_N               PF00479.17   183 sp|P54547|G6PD_BACSU -            489   4.8e-65  219.2   0.0   1   1   1.3e-68   9.7e-65  218.2   0.0     1   183    12   188    12   188 0.98 Glucose-6-phosphate dehydrogenase, NAD binding domain
PGI                  PF00342.14   486 sp|P80860|G6PI_BACSU -            450  2.5e-135  451.6   0.0   1   1  2.2e-139  3.3e-135  451.2   0.0    21   485    11   444     3   447 0.97 Phosphoglucose isomerase
Aldedh               PF00171.17   462 sp|P94428|GABD_BACSU -            462    3e-174  579.7   0.1   1   1  7.4e-178  3.7e-174  579.4   0.1     9   461     5   457     2   458 0.98 Aldehyde dehydrogenase family
ArsC                 PF03960.10   110 sp|P94428|GABD_BACSU -            462     0.047   13.7   0.3   1   2   7.8e-05      0.39   10.8   0.2    31    84     9    64     5    68 0.90 ArsC family
DUF1487              PF07368.6    215 sp|P94428|GABD_BACSU -            462     0.062   12.5   0.1   1   1   2.4e-05      0.12   11.6   0.1     8    61   239   294   236   402 0.81 Protein of unknown function (DUF1487)
AA_permease          PF00324.16   478 sp|P46349|GABP_BACSU -            469  4.7e-130  434.1  51.1   1   1  1.1e-133  5.3e-130  433.9  51.1     1   476    16   454    16   456 0.98 Amino acid permease
AA_permease_2        PF13520.1    426 sp|P46349|GABP_BACSU -            469   1.1e-50  172.3  54.5   1   1   2.8e-54   1.4e-50  172.1  54.5     2   419    13   432    12   444 0.85 Amino acid permease
Aminotran_1_2        PF00155.16   363 sp|P94426|GABR_BACSU -            479   5.5e-19   68.3   0.0   1   1   5.4e-22   7.2e-19   67.9   0.0    14   315   118   408   109   464 0.84 Aminotransferase class I and II
GntR                 PF00392.16    64 sp|P94426|GABR_BACSU -            479   1.8e-16   59.2   0.2   1   1   3.9e-19   5.3e-16   57.8   0.0     2    64    17    79    16    79 0.99 Bacterial regulatory proteins, gntR family
RPA_C                PF08784.6    102 sp|P94426|GABR_BACSU -            479   0.00092   19.5   0.0   1   2   2.8e-05     0.038   14.3   0.0    69    97    43    71    40    72 0.94 Replication protein A C terminal
AAA_32               PF13654.1    509 sp|P94426|GABR_BACSU -            479      0.01   14.5   0.4   1   1   1.2e-05     0.016   13.8   0.4    98   166   345   412   335   440 0.83 AAA domain
HTH_24               PF13412.1     48 sp|P94426|GABR_BACSU -            479     0.011   15.0   0.0   1   1   3.9e-05     0.053   12.9   0.0    19    47    41    69    39    70 0.96 Winged helix-turn-helix DNA-binding
HTH_36               PF13730.1     55 sp|P94426|GABR_BACSU -            479     0.014   15.4   0.0   1   1   2.7e-05     0.037   14.1   0.0    26    55    40    69    35    69 0.93 Helix-turn-helix domain
Sigma70_r4_2         PF08281.7     54 sp|P94426|GABR_BACSU -            479     0.028   13.8   0.2   1   2   0.00048      0.65    9.5   0.0    30    50    43    63    41    66 0.89 Sigma-70, region 4
Fe_dep_repress       PF01325.14    60 sp|P94426|GABR_BACSU -            479     0.052   13.5   0.0   1   1   0.00011      0.15   12.0   0.0    20    58    37    75    32    77 0.88 Iron dependent repressor, N-terminal DNA binding domain
TrmB                 PF01978.14    68 sp|P94426|GABR_BACSU -            479      0.08   12.6   0.0   1   1   0.00025      0.34   10.6   0.0    25    58    42    75    32    85 0.87 Sugar-specific transcriptional regulator TrmB
NUMOD1               PF07453.8     37 sp|P94426|GABR_BACSU -            479      0.15   11.9   0.0   1   1   0.00026      0.35   10.7   0.0    17    35    40    58    38    60 0.94 NUMOD1 domain
Aminotran_3          PF00202.16   339 sp|P94427|GABT_BACSU -            436  3.4e-107  358.2   0.0   1   1  5.4e-111    4e-107  357.9   0.0     2   339    33   374    32   374 0.96 Aminotransferase class-III
Aminotran_1_2        PF00155.16   363 sp|P94427|GABT_BACSU -            436   1.3e-05   24.3   0.2   3   3   1.1e-06    0.0078   15.1   0.0   164   278   229   337   226   356 0.76 Aminotransferase class I and II
GalKase_gal_bdg      PF10509.4     52 sp|P39574|GAL1_BACSU -            390   5.6e-24   83.1   0.2   1   1     2e-27   9.7e-24   82.4   0.2     3    52     8    58     6    58 0.95 Galactokinase galactose-binding signature
GHMP_kinases_N       PF00288.21    67 sp|P39574|GAL1_BACSU -            390   2.8e-14   52.9   0.0   1   1   1.3e-17   6.2e-14   51.8   0.0     1    66   114   181   114   182 0.91 GHMP kinases N terminal domain
GHMP_kinases_C       PF08544.8     85 sp|P39574|GAL1_BACSU -            390   1.6e-11   44.2   0.0   1   1   6.8e-15   3.4e-11   43.1   0.0     5    69   288   352   279   366 0.89 GHMP kinases C terminal
Epimerase            PF01370.16   236 sp|P55180|GALE_BACSU -            339   1.1e-59  201.7   0.0   1   1   1.3e-62   1.3e-59  201.5   0.0     1   236     3   261     3   261 0.95 NAD dependent epimerase/dehydratase family
Epimerase_Csub       PF13950.1     62 sp|P55180|GALE_BACSU -            339   3.1e-32  110.2   0.3   1   1   5.7e-35   5.6e-32  109.4   0.3     1    62   274   335   274   335 0.99 UDP-glucose 4-epimerase C-term subunit
3Beta_HSD            PF01073.14   280 sp|P55180|GALE_BACSU -            339   6.8e-17   61.0   0.0   1   1   1.1e-19   1.1e-16   60.3   0.0     1   156     4   158     4   170 0.84 3-beta hydroxysteroid dehydrogenase/isomerase family
Polysacc_synt_2      PF02719.10   294 sp|P55180|GALE_BACSU -            339   2.6e-16   59.4   0.0   1   1   2.7e-18   2.7e-15   56.0   0.0     1   173     3   181     3   185 0.82 Polysaccharide biosynthesis protein
RmlD_sub_bind        PF04321.12   287 sp|P55180|GALE_BACSU -            339   9.4e-15   54.2   0.0   1   1     2e-17     2e-14   53.1   0.0     1   139     1   162     1   177 0.94 RmlD substrate binding domain
adh_short            PF00106.20   167 sp|P55180|GALE_BACSU -            339   1.4e-14   54.3   0.0   1   1   2.3e-17   2.3e-14   53.6   0.0     2   144     2   132     1   135 0.86 short chain dehydrogenase
NAD_binding_10       PF13460.1    183 sp|P55180|GALE_BACSU -            339     4e-11   43.2   0.0   1   1   6.3e-14   6.2e-11   42.6   0.0     1   159     3   191     3   248 0.80 NADH(P)-binding
NAD_binding_4        PF07993.7    249 sp|P55180|GALE_BACSU -            339   3.8e-10   39.1   0.0   1   1   4.4e-12   4.3e-09   35.6   0.0     1   185     5   165     5   220 0.83 Male sterility protein
KR                   PF08659.5    181 sp|P55180|GALE_BACSU -            339   8.8e-09   35.2   0.0   1   1   2.5e-11   2.5e-08   33.8   0.0     3   144     3   131     2   136 0.79 KR domain
NmrA                 PF05368.8    233 sp|P55180|GALE_BACSU -            339   1.3e-06   27.8   0.2   1   2   4.5e-07   0.00044   19.5   0.1     1   103     3   124     3   130 0.79 NmrA-like family
UDPG_MGDP_dh_N       PF03721.9    185 sp|P55180|GALE_BACSU -            339    0.0015   17.9   0.1   1   1   2.1e-06     0.002   17.5   0.1     7    51     8    59     1   140 0.75 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain
3HCDH_N              PF02737.13   180 sp|P55180|GALE_BACSU -            339     0.031   13.9   0.0   1   1   6.8e-05     0.067   12.8   0.0     6    71     8    76     3    95 0.70 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain
adh_short_C2         PF13561.1    241 sp|P55180|GALE_BACSU -            339     0.037   13.7   0.0   1   1   7.5e-05     0.074   12.8   0.0     8    83    12    83     7   128 0.86 Enoyl-(Acyl carrier protein) reductase
DAO                  PF01266.19   358 sp|P55180|GALE_BACSU -            339     0.045   12.6   0.2   1   2   0.00063      0.62    8.8   0.1     6    30     8    32     3    40 0.92 FAD dependent oxidoreductase
Semialdhyde_dh       PF01118.19   121 sp|P55180|GALE_BACSU -            339      0.11   12.7   0.1   1   1   0.00033      0.32   11.2   0.1     2    72     3    70     2    82 0.76 Semialdehyde dehydrogenase, NAD binding domain
Aldose_epim          PF01263.15   300 sp|P39840|GALM_BACSU -            325   7.1e-57  192.8   2.1   1   1   1.1e-60   7.9e-57  192.6   2.1     3   299    16   318    14   319 0.94 Aldose 1-epimerase
DUF4432              PF14486.1    302 sp|P39840|GALM_BACSU -            325     0.014   13.9   1.3   2   2   2.3e-06     0.017   13.7   0.6    81   191    93   202    84   319 0.79 Domain of unknown function (DUF4432)
GalP_UDP_tr_C        PF02744.12   167 sp|P39575|GALT_BACSU -            513   5.6e-51  172.3   0.0   2   2   3.9e-54   2.9e-50  170.0   0.0     3   166   250   450   243   451 0.99 Galactose-1-phosphate uridyl transferase, C-terminal domain
GalP_UDP_transf      PF01087.17   183 sp|P39575|GALT_BACSU -            513     4e-36  124.7   0.1   1   1   9.7e-40   7.2e-36  123.9   0.1     5   183    22   234    18   234 0.94 Galactose-1-phosphate uridyl transferase, N-terminal domain
Glucosamine_iso      PF01182.15   199 sp|O31458|GAMA_BACSU -            249   2.1e-27   96.1   0.0   1   1   4.7e-31   3.5e-27   95.4   0.0     3   197    10   211     8   213 0.85 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase
Sugar-bind           PF04198.8    255 sp|O31458|GAMA_BACSU -            249     0.013   14.4   0.2   1   1   1.7e-05      0.13   11.1   0.2    34   232     8   209     4   220 0.69 Putative sugar-binding domain
Glyco_hydro_53       PF07745.8    332 sp|O07013|GANA_BACSU -            429  1.6e-135  451.2   2.8   1   1  2.5e-139  1.8e-135  450.9   2.8     1   332    54   417    54   417 0.99 Glycosyl hydrolase family 53
Cellulase            PF00150.13   281 sp|O07013|GANA_BACSU -            429     5e-09   35.7   2.9   1   1   1.2e-12   9.2e-09   34.8   2.9    17   172    72   232    54   314 0.71 Cellulase (glycosyl hydrolase family 5)
BPD_transp_1         PF00528.17   185 sp|O32261|GANP_BACSU -            418   1.9e-22   79.6  23.7   2   2   2.5e-26   1.9e-22   79.6  23.7     2   176   202   407   201   415 0.91 Binding-protein-dependent transport system inner membrane component
TM2                  PF05154.11    51 sp|O32261|GANP_BACSU -            418     1e-06   28.8   5.9   1   1   1.4e-10     1e-06   28.8   5.9     5    40     4    45     1    57 0.74 TM2 domain
BPD_transp_1         PF00528.17   185 sp|O07011|GANQ_BACSU -            283   9.4e-21   74.1  14.9   2   2   6.3e-25   9.4e-21   74.1  14.9     9   180    98   273    89   278 0.81 Binding-protein-dependent transport system inner membrane component
GD_AH_C              PF04295.8    397 sp|P42240|GARD_BACSU -            510  1.9e-146  487.7   0.0   1   1    3e-150  2.2e-146  487.5   0.0     2   396   115   509   114   510 0.98 D-galactarate dehydratase / Altronate hydrolase, C terminus
SAF                  PF08666.7     63 sp|P42240|GARD_BACSU -            510   2.8e-07   30.8   0.0   1   1   9.2e-11   6.8e-07   29.5   0.0     1    62    20    89    20    90 0.93 SAF domain
Amidase              PF01425.16   441 sp|O06491|GATA_BACSU -            485    2e-157  524.5   0.0   1   1  1.5e-161  2.3e-157  524.3   0.0     1   440    24   465    24   466 0.99 Amidase
GatB_N               PF02934.10   289 sp|O30509|GATB_BACSU -            476  1.2e-121  405.0   0.0   1   1  3.2e-125  1.6e-121  404.6   0.0     1   288     4   288     4   289 0.98 GatB/GatE catalytic domain
GatB_Yqey            PF02637.13   148 sp|O30509|GATB_BACSU -            476   1.8e-55  186.7   4.8   1   1   5.4e-59   2.7e-55  186.1   4.8     1   148   326   473   326   473 0.99 GatB domain
DUF3097              PF11296.3    275 sp|O30509|GATB_BACSU -            476     0.058   12.4   0.0   1   1   1.9e-05     0.096   11.6   0.0   129   174   412   458   373   469 0.80 Protein of unknown function (DUF3097)
Glu-tRNAGln          PF02686.10    72 sp|O06492|GATC_BACSU -             96   4.5e-29  100.0   1.0   1   1   8.2e-33   6.1e-29   99.6   1.0     1    72    20    91    20    91 0.99 Glu-tRNAGln amidotransferase C subunit
Ribosomal_L17        PF01196.14    97 sp|O06492|GATC_BACSU -             96     0.047   14.2   0.0   1   1   7.9e-06     0.058   13.9   0.0    11    78    14    91     6    95 0.78 Ribosomal protein L17
MarR_2               PF12802.2     62 sp|P71015|GBSR_BACSU -            180   0.00078   19.0   0.0   1   1   6.8e-07    0.0013   18.3   0.0    13    54    40    79    28    85 0.84 MarR family
MarR                 PF01047.17    59 sp|P71015|GBSR_BACSU -            180      0.04   13.6   0.0   1   1   4.4e-05     0.082   12.6   0.0    13    50    42    79    39    83 0.90 MarR family
HTH_20               PF12840.2     61 sp|P71015|GBSR_BACSU -            180     0.042   13.6   0.0   1   1   4.1e-05     0.076   12.8   0.0    21    56    43    78    22    82 0.89 Helix-turn-helix domain
HTH_34               PF13601.1     80 sp|P71015|GBSR_BACSU -            180     0.049   13.6   0.0   1   1   5.4e-05     0.099   12.6   0.0    11    46    43    78    36    90 0.85 Winged helix DNA-binding domain
EMP24_GP25L          PF01105.19   183 sp|P71015|GBSR_BACSU -            180     0.069   12.8   0.9   1   1   5.5e-05       0.1   12.3   0.9    51   140    73   161    40   168 0.78 emp24/gp25L/p24 family/GOLD
Rapsyn_N             PF10579.4     80 sp|P71015|GBSR_BACSU -            180     0.072   12.9   0.0   1   1   0.00014      0.26   11.1   0.0    12    45   141   174   131   177 0.90 Rapsyn N-terminal myristoylation and linker region
HTH_27               PF13463.1     68 sp|P71015|GBSR_BACSU -            180       0.1   12.9   0.0   1   1   0.00012      0.22   11.8   0.0    13    51    42    79    31    87 0.89 Winged helix DNA-binding domain
Fe-ADH               PF00465.14   366 sp|P71017|GBSB_BACSU -            402  8.4e-117  389.8   3.2   1   1  1.3e-120  9.5e-117  389.7   3.2     1   364    19   385    19   387 0.98 Iron-containing alcohol dehydrogenase
Fe-ADH_2             PF13685.1    250 sp|P71017|GBSB_BACSU -            402   5.2e-21   75.0   3.9   1   2   2.6e-16   1.9e-12   47.0   0.0     4    97    26   120    23   125 0.95 Iron-containing alcohol dehydrogenase
Fe-ADH_2             PF13685.1    250 sp|P71017|GBSB_BACSU -            402   5.2e-21   75.0   3.9   2   2   1.3e-10   9.9e-07   28.3   1.5   101   250   145   295   140   295 0.92 Iron-containing alcohol dehydrogenase
GTP_cyclohydroI      PF01227.17   179 sp|P19465|GCH1_BACSU -            190     5e-81  270.2   0.4   1   1   1.5e-84   5.6e-81  270.0   0.4     1   178     9   186     9   187 0.98 GTP cyclohydrolase I
QueF                 PF14489.1     81 sp|P19465|GCH1_BACSU -            190     0.022   14.6   0.0   1   1   1.7e-05     0.065   13.1   0.0     1    59    84   143    84   151 0.88 QueF-like protein
GCHY-1               PF02649.9    276 sp|P94398|GCH4_BACSU -            304   1.6e-78  263.7   0.1   1   1   3.6e-82   1.8e-78  263.5   0.1     1   276    34   293    34   293 0.97 Type I GTP cyclohydrolase folE2
DUF3595              PF12166.3    422 sp|P94398|GCH4_BACSU -            304    0.0033   16.3   0.1   1   1     8e-07     0.004   16.0   0.1   165   287   104   243    51   283 0.80 Protein of unknown function (DUF3595)
DUF3091              PF11291.3    100 sp|P94398|GCH4_BACSU -            304     0.055   13.4   0.1   1   1   3.6e-05      0.18   11.7   0.1    39    92    74   126    34   131 0.85 Protein of unknown function (DUF3091)
GCV_H                PF01597.14   122 sp|O32174|GCSH_BACSU -            127   1.4e-51  173.3   1.1   1   1     2e-55   1.5e-51  173.1   1.1     1   121     7   126     7   127 0.98 Glycine cleavage H-protein
Biotin_lipoyl        PF00364.17    74 sp|O32174|GCSH_BACSU -            127   0.00011   21.7   0.1   2   2   3.8e-08   0.00028   20.4   0.1    23    63    45    85    33    89 0.91 Biotin-requiring enzyme
GDC-P                PF02347.11   429 sp|P54376|GCSPA_BACSU -            448  2.1e-173  576.9   0.3   1   1  3.2e-177  2.4e-173  576.7   0.3     1   429     3   443     3   443 0.97 Glycine cleavage system P-protein
Aminotran_5          PF00266.14   371 sp|P54376|GCSPA_BACSU -            448   2.9e-06   26.2   0.1   1   1   6.8e-10     5e-06   25.4   0.1    69   194   138   259   134   379 0.75 Aminotransferase class-V
GDC-P                PF02347.11   429 sp|P54377|GCSPB_BACSU -            488   1.3e-14   53.8   0.0   1   2   1.2e-15   2.9e-12   46.0   0.0    46   284    50   300    32   305 0.81 Glycine cleavage system P-protein
Aminotran_5          PF00266.14   371 sp|P54377|GCSPB_BACSU -            488   3.4e-07   29.3   0.0   1   1     2e-10   4.9e-07   28.8   0.0    90   207   165   280   150   302 0.85 Aminotransferase class-V
Beta_elim_lyase      PF01212.16   290 sp|P54377|GCSPB_BACSU -            488   1.2e-06   27.9   0.1   1   1     7e-10   1.7e-06   27.3   0.1    24   202   110   280    99   282 0.71 Beta-eliminating lyase
DegT_DnrJ_EryC1      PF01041.12   363 sp|P54377|GCSPB_BACSU -            488     0.043   12.8   0.0   1   1   2.5e-05     0.061   12.3   0.0    64   148   162   248   122   281 0.82 DegT/DnrJ/EryC1/StrS aminotransferase family
GCV_T                PF01571.16   211 sp|P54378|GCST_BACSU -            362   4.7e-80  267.8   0.0   1   1   1.9e-83   6.9e-80  267.3   0.0     1   211    46   258    46   258 0.98 Aminomethyltransferase folate-binding domain
GCV_T_C              PF08669.6     95 sp|P54378|GCST_BACSU -            362   2.2e-28   98.1   0.3   1   1     1e-31   3.9e-28   97.3   0.3     2    94   266   356   265   357 0.97 Glycine cleavage T-protein C-terminal barrel domain
SoxG                 PF04268.7    147 sp|P54378|GCST_BACSU -            362   1.1e-08   35.0   0.1   2   2   1.1e-10   4.1e-07   29.9   0.0    43   144   109   214    91   217 0.73 Sarcosine oxidase, gamma subunit family
GerA                 PF03323.8    470 sp|P07868|GERAA_BACSU -            482  4.4e-171  569.1   4.0   1   1  3.7e-175  5.5e-171  568.8   4.0     4   466    16   466    13   471 0.96 Bacillus/Clostridium GerA spore germination protein
Spore_permease       PF03845.8    320 sp|P07869|GERAB_BACSU -            365  1.2e-104  349.4  33.6   1   2  2.5e-108  1.2e-104  349.4  33.6     1   320     9   331     9   331 0.99 Spore germination protein
AA_permease_2        PF13520.1    426 sp|P07869|GERAB_BACSU -            365   2.3e-08   32.9  30.0   1   1   4.7e-12   2.3e-08   32.9  30.0     1   286    10   292    10   299 0.80 Amino acid permease
Trp_Tyr_perm         PF03222.8    394 sp|P07869|GERAB_BACSU -            365   1.7e-06   27.1  24.0   1   3   3.5e-10   1.7e-06   27.1  24.0     5   254    12   254     9   292 0.83 Tryptophan/tyrosine permease family
Spore_GerAC          PF05504.6    171 sp|P07870|GERAC_BACSU -            373   1.4e-42  145.4   4.5   1   1   1.6e-46   2.4e-42  144.6   4.5     1   169   200   368   200   370 0.97 Spore germination B3/ GerAC like, C-terminal
GerA                 PF03323.8    470 sp|P39569|GERBA_BACSU -            483  6.7e-175  581.7   2.2   1   1  5.1e-179  7.6e-175  581.5   2.2     1   467    10   472    10   475 0.97 Bacillus/Clostridium GerA spore germination protein
Spore_permease       PF03845.8    320 sp|P39570|GERBB_BACSU -            368  7.4e-102  340.2  36.9   1   1  1.5e-105  7.4e-102  340.2  36.9     1   320     7   331     7   331 0.99 Spore germination protein
Trp_Tyr_perm         PF03222.8    394 sp|P39570|GERBB_BACSU -            368   1.5e-05   24.0  37.2   1   1   3.9e-09   1.9e-05   23.6  37.2     5   360    10   353     6   363 0.81 Tryptophan/tyrosine permease family
Aa_trans             PF01490.13   409 sp|P39570|GERBB_BACSU -            368      0.22    9.9  32.4   1   2   2.1e-06      0.01   14.3  26.1     1   245     6   232     6   241 0.75 Transmembrane amino acid transporter protein
Spore_GerAC          PF05504.6    171 sp|P39571|GERBC_BACSU -            374   3.4e-51  173.4   1.8   1   1   3.1e-55   4.7e-51  172.9   1.8     2   170   204   372   203   373 0.98 Spore germination B3/ GerAC like, C-terminal
GerA                 PF03323.8    470 sp|P49939|GERKA_BACSU -            544  3.1e-196  652.0   7.3   1   1  9.9e-200  3.7e-196  651.8   7.3     1   469    43   509    43   510 0.99 Bacillus/Clostridium GerA spore germination protein
Y1_Tnp               PF01797.11   121 sp|P49939|GERKA_BACSU -            544      0.11   12.3   0.0   1   2   0.00022      0.82    9.5   0.0    15    57    31    75    27    81 0.84 Transposase IS200 like
Spore_permease       PF03845.8    320 sp|P49940|GERKB_BACSU -            373    5e-107  357.2  23.6   1   1  8.4e-111  6.2e-107  356.9  23.6     1   319     5   325     5   326 0.99 Spore germination protein
MtrG                 PF04210.8     70 sp|P49940|GERKB_BACSU -            373       3.7    7.2   5.9   1   1   4.4e-05      0.33   10.6   0.2    40    64    29    55    22    60 0.87 Tetrahydromethanopterin S-methyltransferase, subunit G
Spore_GerAC          PF05504.6    171 sp|P49941|GERKC_BACSU -            407   1.4e-46  158.4   1.3   1   1   1.5e-50   2.2e-46  157.7   1.3     2   170   228   396   227   397 0.97 Spore germination B3/ GerAC like, C-terminal
gerPA                PF10676.4     73 sp|O06716|GERPF_BACSU -             72   5.3e-29   99.8   3.2   1   1   3.9e-33   5.7e-29   99.7   3.2     1    72     1    71     1    72 0.99 Spore germination protein gerPA/gerPF
gerPA                PF10676.4     73 sp|O06721|GERPA_BACSU -             73   1.1e-29  102.0   3.7   1   1   1.7e-33   1.2e-29  101.8   3.7     1    73     1    73     1    73 0.99 Spore germination protein gerPA/gerPF
DUF2772              PF10970.3    121 sp|O06721|GERPA_BACSU -             73     0.016   15.2   0.2   1   1     4e-06      0.03   14.4   0.2    77   110     2    34     1    41 0.70 Protein of unknown function (DUF2772)
Glycos_transf_2      PF00535.21   169 sp|P46917|GGAA_BACSU -            446   4.2e-33  114.4   0.4   1   1   1.7e-36   8.4e-33  113.4   0.4     1   164     3   169     3   174 0.87 Glycosyl transferase family 2
Glyco_tranf_2_3      PF13641.1    228 sp|P46917|GGAA_BACSU -            446   3.5e-14   53.1   0.0   1   1   9.9e-18   4.9e-14   52.6   0.0     3   192     2   191     1   219 0.88 Glycosyltransferase like family 2
Glyco_trans_2_3      PF13632.1    193 sp|P46917|GGAA_BACSU -            446     0.022   14.4   0.1   1   1   6.7e-06     0.033   13.8   0.1     2   143    89   232    88   274 0.65 Glycosyl transferase family group 2
Glyphos_transf       PF04464.9    369 sp|P46918|GGAB_BACSU -            900     5e-89  298.6  25.8   2   2   1.7e-92     5e-89  298.6  25.8     2   368   521   891   520   892 0.96 CDP-Glycerol:Poly(glycerophosphate) glycerophosphotransferase
Glycos_transf_2      PF00535.21   169 sp|P46918|GGAB_BACSU -            900   2.8e-35  121.4   0.6   1   2   9.4e-39   2.8e-35  121.4   0.6     1   163    11   171    11   176 0.97 Glycosyl transferase family 2
Glyco_tranf_2_3      PF13641.1    228 sp|P46918|GGAB_BACSU -            900     3e-15   56.6   0.0   1   1   1.9e-18   5.7e-15   55.7   0.0     3   198    10   201     8   233 0.80 Glycosyltransferase like family 2
Glyco_tranf_2_2      PF10111.4    281 sp|P46918|GGAB_BACSU -            900   2.1e-13   50.0   2.3   1   3     7e-17   2.1e-13   50.0   2.3     1   179    11   173    11   213 0.76 Glycosyltransferase like family 2
Glyco_trans_2_3      PF13632.1    193 sp|P46918|GGAB_BACSU -            900     0.022   14.4   0.0   1   1   1.2e-05     0.037   13.7   0.0     1   116    93   205    93   273 0.68 Glycosyl transferase family group 2
G_glu_transpept      PF01019.16   510 sp|P54422|GGT_BACSU  -            587  1.9e-178  594.1   0.0   1   1  1.4e-182  2.1e-178  593.9   0.0     2   510    62   577    61   577 0.95 Gamma-glutamyltranspeptidase
FAD-oxidase_C        PF02913.14   248 sp|P94535|GLCD_BACSU -            470     4e-73  245.8   0.2   1   1     1e-76   5.1e-73  245.4   0.2     1   248   216   457   216   457 0.99 FAD linked oxidases, C-terminal domain
FAD_binding_4        PF01565.18   139 sp|P94535|GLCD_BACSU -            470   5.7e-44  148.9   0.1   1   2   4.5e-47   2.2e-43  147.0   0.0     1   139    41   180    41   180 0.98 FAD binding domain
DUF3006              PF11213.3     71 sp|P94535|GLCD_BACSU -            470     0.042   13.6   1.3   2   2   7.9e-05      0.39   10.5   0.3    11    65   274   330   273   334 0.84 Protein of unknown function (DUF3006)
MFS_1                PF07690.11   352 sp|O07563|GLCP_BACSU -            401     3e-22   78.8  37.1   1   2     6e-26     3e-22   78.8  37.1     6   351    13   348     7   349 0.81 Major Facilitator Superfamily
7TMR-DISM_7TM        PF07695.6    205 sp|O07563|GLCP_BACSU -            401     0.011   15.4  16.7   2   3   2.2e-06     0.011   15.4  16.7     9   117    72   177    64   192 0.80 7TM diverse intracellular signalling
7TMR-DISM_7TM        PF07695.6    205 sp|O07563|GLCP_BACSU -            401     0.011   15.4  16.7   3   3   3.6e-05      0.18   11.4  22.2    25   192   206   379   196   382 0.77 7TM diverse intracellular signalling
PRD                  PF00874.15    89 sp|O31691|GLCT_BACSU -            281   7.7e-45  150.9  10.8   1   2   3.2e-29   1.2e-25   89.4   1.2     2    89    80   167    79   167 0.98 PRD domain
PRD                  PF00874.15    89 sp|O31691|GLCT_BACSU -            281   7.7e-45  150.9  10.8   2   2     5e-22   1.9e-18   66.3   2.7     2    88   185   275   184   276 0.95 PRD domain
CAT_RBD              PF03123.10    59 sp|O31691|GLCT_BACSU -            281   5.9e-24   83.5   3.9   1   1   4.2e-27   1.6e-23   82.1   3.9     2    59     6    63     5    63 0.98 CAT RNA binding domain
Sugar_transport      PF06800.7    269 sp|P40420|GLCU_BACSU -            287  5.3e-110  366.7  26.0   1   1    2e-113  6.1e-110  366.5  26.0     1   268    16   279    16   280 0.99 Sugar transport protein
EamA                 PF00892.15   126 sp|P40420|GLCU_BACSU -            287   4.3e-05   23.5  34.0   1   3   9.2e-05      0.27   11.2  18.5     1   122    11   127    11   135 0.81 EamA-like transporter family
EamA                 PF00892.15   126 sp|P40420|GLCU_BACSU -            287   4.3e-05   23.5  34.0   3   3   1.6e-06    0.0047   16.9   7.7    15   122   176   274   160   280 0.75 EamA-like transporter family
Tim17                PF02466.14   128 sp|P40420|GLCU_BACSU -            287    0.0069   16.4   1.3   1   2     9e-06     0.027   14.5   0.0    12    85    56   142    50   145 0.75 Tim17/Tim22/Tim23/Pmp24 family
EmrE                 PF13536.1    113 sp|P40420|GLCU_BACSU -            287      0.61   10.3  28.5   2   2   3.3e-05     0.097   12.8   7.9    29   103   197   275   153   282 0.79 Multidrug resistance efflux transporter
Glyco_transf_5       PF08323.6    245 sp|P39125|GLGA_BACSU -            484   3.4e-85  285.4   1.0   1   1   1.4e-88   5.1e-85  284.8   1.0     1   244     2   236     2   237 0.94 Starch synthase catalytic domain
Glycos_transf_1      PF00534.15   172 sp|P39125|GLGA_BACSU -            484   1.6e-15   56.9   0.0   1   1   7.5e-19   2.8e-15   56.1   0.0    10   157   288   439   280   448 0.94 Glycosyl transferases group 1
Glyco_trans_4_4      PF13579.1    160 sp|P39125|GLGA_BACSU -            484   8.5e-06   26.0   0.0   1   1   8.2e-09     3e-05   24.1   0.0     1   146    17   224    17   234 0.61 Glycosyl transferase 4-like domain
Glyco_transf_4       PF13439.1    177 sp|P39125|GLGA_BACSU -            484   1.1e-05   25.2   0.1   2   2   2.1e-08   7.6e-05   22.4   0.1    72   176   118   254    98   255 0.78 Glycosyltransferase Family 4
CBM_48               PF02922.13    85 sp|P39118|GLGB_BACSU -            627   7.1e-25   86.8   0.1   1   1   3.3e-28   1.6e-24   85.7   0.1     2    85    26   108    25   108 0.92 Carbohydrate-binding module 48 (Isoamylase N-terminal domain)
Alpha-amylase_C      PF02806.13    96 sp|P39118|GLGB_BACSU -            627   3.9e-20   71.8   0.0   1   1   2.4e-23   1.2e-19   70.2   0.0     1    92   520   617   520   621 0.89 Alpha amylase, C-terminal all-beta domain
Alpha-amylase        PF00128.19   316 sp|P39118|GLGB_BACSU -            627     3e-19   69.5   5.4   1   3   1.6e-16   7.9e-13   48.4   0.1    10    80   177   248   173   253 0.95 Alpha amylase, catalytic domain
Alpha-amylase        PF00128.19   316 sp|P39118|GLGB_BACSU -            627     3e-19   69.5   5.4   2   3   9.5e-09   4.7e-05   22.9   0.2   116   203   256   358   247   474 0.70 Alpha amylase, catalytic domain
NTP_transferase      PF00483.18   248 sp|P39122|GLGC_BACSU -            380     2e-71  240.1   0.0   1   1   9.8e-75   2.9e-71  239.6   0.0     2   247     7   260     6   261 0.97 Nucleotidyl transferase
NTP_transf_3         PF12804.2    160 sp|P39122|GLGC_BACSU -            380   1.3e-08   35.0   0.0   1   1   5.5e-12   1.6e-08   34.7   0.0     1   127     7   157     7   268 0.80 MobA-like NTP transferase domain
Hexapep              PF00132.19    36 sp|P39122|GLGC_BACSU -            380    0.0017   17.7   4.8   3   3   5.4e-06     0.016   14.6   1.6    11    29   325   342   315   346 0.72 Bacterial transferase hexapeptide (six repeats)
RtcB                 PF01139.12   420 sp|P39122|GLGC_BACSU -            380      0.22   10.4   0.6   1   1    0.0001      0.31    9.9   0.6    15    61   308   354   290   357 0.88 tRNA-splicing ligase RtcB
NTP_transferase      PF00483.18   248 sp|P39124|GLGD_BACSU -            343   1.8e-06   27.4   0.0   1   1   7.1e-10   5.3e-06   25.9   0.0    13   131    19   146    17   157 0.72 Nucleotidyl transferase
ROK                  PF00480.15   179 sp|P54495|GLK_BACSU  -            321   3.7e-47  160.4   6.0   1   2   9.9e-50   2.9e-46  157.5   7.1     1   179     8   192     8   192 0.90 ROK family
BcrAD_BadFG          PF01869.15   271 sp|P54495|GLK_BACSU  -            321   1.4e-06   27.8   0.3   1   1   4.7e-08   0.00014   21.2   0.3     2   249     8   280     7   311 0.66 BadF/BadG/BcrA/BcrD ATPase family
Glucokinase          PF02685.11   316 sp|P54495|GLK_BACSU  -            321   5.6e-06   25.3   7.5   1   1   5.7e-08   0.00017   20.4   7.5     4   314    10   312     7   314 0.69 Glucokinase
DUF1464              PF07318.7    343 sp|P54495|GLK_BACSU  -            321     0.031   13.1   9.8   1   2   5.7e-05      0.17   10.6   0.1     1    60     8    72     8    81 0.83 Protein of unknown function (DUF1464)
PGM_PMM_I            PF02878.11   138 sp|O34824|GLMM_BACSU -            448     2e-43  147.2   0.0   1   1   1.5e-46   3.7e-43  146.3   0.0     2   135     3   135     2   138 0.97 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I
PGM_PMM_III          PF02880.11   113 sp|O34824|GLMM_BACSU -            448     2e-34  118.0   0.1   1   1   1.8e-37   4.5e-34  116.8   0.1     1   112   257   368   257   369 0.95 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III
PGM_PMM_IV           PF00408.15    73 sp|O34824|GLMM_BACSU -            448   9.2e-20   70.4   2.5   2   2   1.2e-22   3.1e-19   68.7   1.7     1    72   373   441   373   442 0.97 Phosphoglucomutase/phosphomannomutase, C-terminal domain
PGM_PMM_II           PF02879.11   104 sp|O34824|GLMM_BACSU -            448   4.8e-18   65.4   0.8   1   1     1e-20   2.6e-17   63.0   0.2     1   104   157   253   157   253 0.93 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II
DUF669               PF05037.8    141 sp|O34824|GLMM_BACSU -            448     0.015   15.2   0.2   1   1   1.1e-05     0.028   14.3   0.2    50   123   324   392   315   402 0.86 Protein of unknown function (DUF669)
HDV_ag               PF01517.13   194 sp|O34824|GLMM_BACSU -            448      0.12   12.0   0.0   1   1    0.0001      0.25   10.9   0.0   109   157   107   156   101   160 0.85 Hepatitis delta virus delta antigen
Hexapep              PF00132.19    36 sp|P14192|GLMU_BACSU -            456   2.5e-29   99.4  20.2   1   5   7.7e-12   1.1e-08   34.1   1.8     1    34   266   299   266   301 0.96 Bacterial transferase hexapeptide (six repeats)
Hexapep              PF00132.19    36 sp|P14192|GLMU_BACSU -            456   2.5e-29   99.4  20.2   3   5   1.5e-13   2.2e-10   39.5   1.1     1    36   317   352   317   352 0.96 Bacterial transferase hexapeptide (six repeats)
Hexapep              PF00132.19    36 sp|P14192|GLMU_BACSU -            456   2.5e-29   99.4  20.2   5   5   5.6e-11   8.3e-08   31.3   0.2     2    35   395   428   394   429 0.97 Bacterial transferase hexapeptide (six repeats)
NTP_transferase      PF00483.18   248 sp|P14192|GLMU_BACSU -            456   1.2e-23   83.7   0.4   1   1   1.3e-26   1.9e-23   83.0   0.4     2   221     6   216     5   231 0.88 Nucleotidyl transferase
NTP_transf_3         PF12804.2    160 sp|P14192|GLMU_BACSU -            456   8.1e-20   71.5   0.0   1   1     1e-22   1.5e-19   70.6   0.0     1   127     6   135     6   198 0.81 MobA-like NTP transferase domain
IspD                 PF01128.14   221 sp|P14192|GLMU_BACSU -            456   1.6e-08   34.3   0.5   1   1   1.7e-11   2.5e-08   33.7   0.5     3   123     6   125     5   194 0.82 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase
Hexapep_2            PF14602.1     34 sp|P14192|GLMU_BACSU -            456     5e-06   25.9  16.9   4   4   2.3e-08   3.5e-05   23.2   0.2     2    33   395   428   394   429 0.93 Hexapeptide repeat of succinyl-transferase
CTP_transf_3         PF02348.14   217 sp|P14192|GLMU_BACSU -            456   0.00014   21.5   0.2   1   2   3.4e-07   0.00051   19.7   0.1     4   120     8   125     5   162 0.80 Cytidylyltransferase
CofC                 PF01983.11   217 sp|P14192|GLMU_BACSU -            456    0.0033   16.4   0.0   1   1   3.8e-06    0.0057   15.6   0.0    12   114    16   120     6   132 0.69 Guanylyl transferase CofC like
DUF2064              PF09837.4    122 sp|P14192|GLMU_BACSU -            456     0.027   14.0   0.2   1   1   6.6e-05     0.098   12.2   0.1    17    88    52   122    41   136 0.74 Uncharacterized protein conserved in bacteria (DUF2064)
GNT-I                PF03071.10   434 sp|P14192|GLMU_BACSU -            456     0.082   11.4   0.0   1   1     9e-05      0.13   10.7   0.0   349   414    35   100    22   118 0.85 GNT-I family
Gln-synt_C           PF00120.19   259 sp|P12425|GLNA_BACSU -            444  4.8e-103  343.8   0.0   1   1  1.3e-106  6.2e-103  343.4   0.0     2   259   106   354   105   354 0.97 Glutamine synthetase, catalytic domain
Gln-synt_N           PF03951.14    84 sp|P12425|GLNA_BACSU -            444   3.4e-33  113.0   0.0   1   1   1.5e-36   7.3e-33  112.0   0.0     1    84    17    99    17    99 0.99 Glutamine synthetase, beta-Grasp domain
DUF3755              PF12579.3     35 sp|P12425|GLNA_BACSU -            444     0.012   15.0   0.5   1   2   5.5e-05      0.27   10.6   0.1    16    30   109   123   109   125 0.91 Protein of unknown function (DUF3755)
SBP_bac_3            PF00497.15   225 sp|O34563|GLNH_BACSU -            273   1.4e-61  207.6   3.0   1   1   2.2e-65   1.7e-61  207.3   3.0     1   224    48   268    48   269 0.95 Bacterial extracellular solute-binding proteins, family 3
LPAM_2               PF13627.1     24 sp|O34563|GLNH_BACSU -            273      0.06   13.0   2.6   1   1   1.5e-05      0.11   12.1   2.6     2    19     8    25     6    26 0.80 Prokaryotic lipoprotein-attachment site
BPD_transp_1         PF00528.17   185 sp|O34671|GLNM_BACSU -            216   3.9e-20   72.1  12.5   2   2   5.3e-24   3.9e-20   72.1  12.5     3   184    33   213    31   214 0.93 Binding-protein-dependent transport system inner membrane component
BPD_transp_1         PF00528.17   185 sp|O34606|GLNP_BACSU -            218   6.7e-19   68.1  13.9   1   1   4.5e-23   6.7e-19   68.1  13.9     2   180    34   214    33   218 0.90 Binding-protein-dependent transport system inner membrane component
ABC_tran             PF00005.22   137 sp|O34677|GLNQ_BACSU -            242     4e-38  130.8   0.0   1   1   1.7e-40   5.3e-38  130.4   0.0     1   137    17   165    17   165 0.95 ABC transporter
AAA_21               PF13304.1    303 sp|O34677|GLNQ_BACSU -            242   5.5e-15   56.1   0.0   1   2   1.8e-07   5.7e-05   23.2   0.2     2    32    30    58    29    85 0.70 AAA domain
AAA_21               PF13304.1    303 sp|O34677|GLNQ_BACSU -            242   5.5e-15   56.1   0.0   2   2   6.9e-10   2.2e-07   31.1   0.0   220   298   120   195    64   198 0.81 AAA domain
SMC_N                PF02463.14   220 sp|O34677|GLNQ_BACSU -            242   4.4e-09   35.9   0.1   1   1     8e-10   2.5e-07   30.1   0.1    16   209    18   207     9   214 0.65 RecF/RecN/SMC N terminal domain
AAA_15               PF13175.1    415 sp|O34677|GLNQ_BACSU -            242   7.6e-07   28.5   0.0   1   2     7e-05     0.022   13.8   0.2    17    43    21    51     4    99 0.72 AAA ATPase domain
AAA_15               PF13175.1    415 sp|O34677|GLNQ_BACSU -            242   7.6e-07   28.5   0.0   2   2   0.00013      0.04   12.9   0.0   371   411   154   195   109   199 0.83 AAA ATPase domain
AAA_10               PF12846.2    304 sp|O34677|GLNQ_BACSU -            242   2.9e-06   26.9   0.2   1   2     1e-05    0.0032   16.9   0.1     4    23    30    49    27    84 0.82 AAA-like domain
ABC_ATPase           PF09818.4    448 sp|O34677|GLNQ_BACSU -            242   3.1e-06   26.0   0.4   1   2   0.00013     0.041   12.4   0.0   240   265    22    48    16    51 0.92 Predicted ATPase of the ABC class
ABC_ATPase           PF09818.4    448 sp|O34677|GLNQ_BACSU -            242   3.1e-06   26.0   0.4   2   2    0.0019      0.61    8.6   0.1   322   412   136   210   126   233 0.71 Predicted ATPase of the ABC class
AAA_23               PF13476.1    202 sp|O34677|GLNQ_BACSU -            242   4.8e-06   27.0   0.1   1   1   2.9e-08   9.3e-06   26.1   0.1     2    39     2    47     2    50 0.74 AAA domain
AAA_29               PF13555.1     62 sp|O34677|GLNQ_BACSU -            242   9.5e-06   25.0   0.0   1   1   5.7e-08   1.8e-05   24.1   0.0    15    41    18    45     5    59 0.77 P-loop containing region of AAA domain
AAA_13               PF13166.1    712 sp|O34677|GLNQ_BACSU -            242   1.7e-05   23.5   0.0   1   2    0.0027      0.85    7.9   0.0    16    48    27    57    12   118 0.77 AAA domain
AAA_13               PF13166.1    712 sp|O34677|GLNQ_BACSU -            242   1.7e-05   23.5   0.0   2   2   4.3e-05     0.014   13.9   0.0   527   580   154   205   145   229 0.90 AAA domain
AAA_22               PF13401.1    131 sp|O34677|GLNQ_BACSU -            242   2.4e-05   24.4   0.0   1   1   4.5e-07   0.00014   21.9   0.0     3    37    26    91    23   202 0.54 AAA domain
AAA_16               PF13191.1    185 sp|O34677|GLNQ_BACSU -            242   4.7e-05   23.4   0.1   1   1   1.8e-07   5.7e-05   23.1   0.1    23    59    26    63    15   202 0.83 AAA ATPase domain
AAA_19               PF13245.1     76 sp|O34677|GLNQ_BACSU -            242   8.1e-05   22.3   0.0   1   1   8.4e-07   0.00026   20.6   0.0    10    51    27    63    19    66 0.86 Part of AAA domain
Arch_ATPase          PF01637.13   234 sp|O34677|GLNQ_BACSU -            242   9.3e-05   22.2   0.1   1   1   1.1e-06   0.00035   20.3   0.0     8    52    17    58    15   130 0.74 Archaeal ATPase
DUF258               PF03193.11   161 sp|O34677|GLNQ_BACSU -            242   9.7e-05   21.6   0.1   1   1   4.5e-07   0.00014   21.0   0.1    25    59    16    51     2    88 0.76 Protein of unknown function, DUF258
TK                   PF00265.13   176 sp|O34677|GLNQ_BACSU -            242   0.00024   20.7   0.4   1   3     2e-05    0.0063   16.0   0.0     2    59    28    86    27   105 0.78 Thymidine kinase
AAA_17               PF13207.1    121 sp|O34677|GLNQ_BACSU -            242   0.00025   21.8   0.1   1   1   7.2e-06    0.0023   18.7   0.0     1    17    29    45    29    82 0.89 AAA domain
AAA_14               PF13173.1    128 sp|O34677|GLNQ_BACSU -            242     0.001   18.9   0.1   1   1   1.5e-05    0.0047   16.8   0.0     2    49    27    74    26   124 0.76 AAA domain
AAA_18               PF13238.1    129 sp|O34677|GLNQ_BACSU -            242    0.0011   19.2   0.0   1   1   9.2e-06    0.0029   17.9   0.0     1    67    30   110    30   132 0.74 AAA domain
AAA_25               PF13481.1    194 sp|O34677|GLNQ_BACSU -            242    0.0012   18.2   0.0   1   2   8.2e-05     0.026   13.9   0.0    30    50    24    44    16    47 0.91 AAA domain
SbcCD_C              PF13558.1     90 sp|O34677|GLNQ_BACSU -            242    0.0015   18.4   0.6   1   1   0.00012     0.037   13.9   0.2    61    89   152   180   114   181 0.79 Putative exonuclease SbcCD, C subunit
T2SE                 PF00437.15   272 sp|O34677|GLNQ_BACSU -            242    0.0015   17.4   0.0   1   1   7.2e-06    0.0023   16.8   0.0   118   166    17    64     5   100 0.79 Type II/IV secretion system protein
AAA_33               PF13671.1    143 sp|O34677|GLNQ_BACSU -            242    0.0018   18.1   0.0   1   1   9.8e-06    0.0031   17.3   0.0     1    19    29    47    29   118 0.79 AAA domain
MobB                 PF03205.9    140 sp|O34677|GLNQ_BACSU -            242    0.0036   16.9   0.1   1   1   4.2e-05     0.013   15.1   0.1     2    24    29    50    28    73 0.80 Molybdopterin guanine dinucleotide synthesis protein B
Sigma54_activat      PF00158.21   168 sp|O34677|GLNQ_BACSU -            242    0.0047   16.4   0.1   1   2   0.00015     0.048   13.1   0.0    11    63    16    67     9    71 0.86 Sigma-54 interaction domain
AAA_30               PF13604.1    196 sp|O34677|GLNQ_BACSU -            242    0.0051   16.4   0.8   1   1   4.2e-05     0.013   15.0   0.0    17    57    26    68    19    82 0.77 AAA domain
AAA                  PF00004.24   132 sp|O34677|GLNQ_BACSU -            242     0.009   16.2   0.2   1   1   0.00087      0.28   11.4   0.0     1    52    30    85    30   197 0.73 ATPase family associated with various cellular activities (AAA)
Adeno_IVa2           PF02456.10   370 sp|O34677|GLNQ_BACSU -            242     0.012   14.2   0.1   1   1     8e-05     0.025   13.2   0.0    77   117    16    54     3    68 0.71 Adenovirus IVa2 protein
UPF0079              PF02367.12   123 sp|O34677|GLNQ_BACSU -            242     0.012   15.1   0.0   1   1   7.2e-05     0.023   14.3   0.0     7    37    19    49    15    93 0.86 Uncharacterised P-loop hydrolase UPF0079
NACHT                PF05729.7    166 sp|O34677|GLNQ_BACSU -            242     0.013   15.1   0.0   1   1   7.4e-05     0.023   14.3   0.0     2    20    29    47    28    52 0.90 NACHT domain
AAA_5                PF07728.9    139 sp|O34677|GLNQ_BACSU -            242     0.013   15.2   0.0   1   1   0.00016      0.05   13.3   0.0     2    34    30    64    29    87 0.85 AAA domain (dynein-related subfamily)
AAA_28               PF13521.1    163 sp|O34677|GLNQ_BACSU -            242     0.014   15.3   0.0   1   1   0.00018     0.056   13.4   0.0     2    22    30    50    29    79 0.79 AAA domain
RNA12                PF10443.4    431 sp|O34677|GLNQ_BACSU -            242     0.016   13.7   0.0   1   1   7.8e-05     0.025   13.1   0.0    11    64    21    76    13    90 0.82 RNA12 protein
NB-ARC               PF00931.17   287 sp|O34677|GLNQ_BACSU -            242     0.019   13.8   0.1   1   1   9.1e-05     0.029   13.2   0.1    17    46    25    54    14    85 0.86 NB-ARC domain
MutS_V               PF00488.16   235 sp|O34677|GLNQ_BACSU -            242      0.03   13.7   0.0   1   1   0.00016     0.049   13.0   0.0    31    63    15    47     5    76 0.88 MutS domain V
MMR_HSR1             PF01926.18   116 sp|O34677|GLNQ_BACSU -            242      0.03   14.2   0.0   1   1   0.00015     0.049   13.5   0.0     2    21    30    49    29   127 0.81 50S ribosome-binding GTPase
Miro                 PF08477.8    119 sp|O34677|GLNQ_BACSU -            242     0.042   14.3   0.0   1   1   0.00024     0.076   13.5   0.0     2    44    30    71    29    97 0.76 Miro-like protein
Rad17                PF03215.10   519 sp|O34677|GLNQ_BACSU -            242     0.042   12.5   0.0   1   1   0.00017     0.054   12.1   0.0    36    95    18    81    14   118 0.68 Rad17 cell cycle checkpoint protein
cobW                 PF02492.14   178 sp|O34677|GLNQ_BACSU -            242     0.043   13.2   0.2   1   1   0.00032       0.1   12.0   0.0     2    22    29    49    28    84 0.79 CobW/HypB/UreG, nucleotide-binding domain
Zeta_toxin           PF06414.7    201 sp|O34677|GLNQ_BACSU -            242     0.044   12.8   0.0   1   1   0.00023     0.073   12.1   0.0    14    56    25    68    15    88 0.78 Zeta toxin
FtsK_SpoIIIE         PF01580.13   205 sp|O34677|GLNQ_BACSU -            242     0.047   13.1   0.0   1   1   0.00031     0.099   12.0   0.0    29    56    18    45     5    48 0.84 FtsK/SpoIIIE family
ATP_bind_1           PF03029.12   238 sp|O34677|GLNQ_BACSU -            242     0.054   13.0   0.1   1   2    0.0014      0.45   10.0   0.1     1    31    32    61    32    64 0.79 Conserved hypothetical ATP binding protein
IstB_IS21            PF01695.12   178 sp|O34677|GLNQ_BACSU -            242     0.096   12.1   0.0   1   1   0.00056      0.18   11.2   0.0    44    63    24    43    13    59 0.86 IstB-like ATP binding protein
Viral_helicase1      PF01443.13   234 sp|O34677|GLNQ_BACSU -            242     0.099   12.1   0.0   1   1   0.00092      0.29   10.6   0.0     2    54    31    87    30   100 0.75 Viral (Superfamily 1) RNA helicase
DUF3987              PF13148.1    378 sp|O34677|GLNQ_BACSU -            242      0.11   10.9   0.0   1   1   0.00059      0.19   10.2   0.0    42    68    30    55    29    79 0.87 Protein of unknown function (DUF3987)
Na_Ala_symp          PF01235.12   416 sp|O31464|GLNT_BACSU -            478  4.4e-156  519.6  27.9   1   1  3.7e-160  5.4e-156  519.3  27.9     2   413    45   451    44   454 0.97 Sodium:alanine symporter family
DAO                  PF01266.19   358 sp|O31616|GLOX_BACSU -            369   3.8e-73  246.4   0.0   1   1   3.5e-76   4.4e-73  246.2   0.0     2   358     7   345     6   345 0.92 FAD dependent oxidoreductase
NAD_binding_8        PF13450.1     68 sp|O31616|GLOX_BACSU -            369   1.6e-06   28.0   0.2   1   1   6.9e-09   8.5e-06   25.7   0.3     1    38     9    45     9    71 0.91 NAD(P)-binding Rossmann-like domain
Pyr_redox_3          PF13738.1    203 sp|O31616|GLOX_BACSU -            369   5.2e-05   23.3   0.2   1   1   1.7e-06    0.0021   18.1   0.2     1   139     8   207     8   224 0.73 Pyridine nucleotide-disulphide oxidoreductase
FAD_binding_2        PF00890.19   417 sp|O31616|GLOX_BACSU -            369   0.00066   18.6   0.4   1   1     1e-06    0.0013   17.6   0.4     2    72     7    75     6    88 0.76 FAD binding domain
Pyr_redox_2          PF07992.9    201 sp|O31616|GLOX_BACSU -            369     0.002   18.0   0.4   1   2   2.1e-05     0.026   14.4   0.4     3    43     8    46     6    93 0.74 Pyridine nucleotide-disulphide oxidoreductase
HI0933_like          PF03486.9    409 sp|O31616|GLOX_BACSU -            369    0.0027   16.2   0.1   2   2   0.00058      0.72    8.2   0.0   111   166   153   206   108   218 0.88 HI0933-like protein
FAD_oxidored         PF12831.2    428 sp|O31616|GLOX_BACSU -            369     0.012   14.7   0.0   1   1   1.2e-05     0.015   14.3   0.0     3    67     8    84     6   202 0.64 FAD dependent oxidoreductase
Pyr_redox            PF00070.22    80 sp|O31616|GLOX_BACSU -            369     0.025   14.9   0.6   1   1   4.3e-05     0.053   13.9   0.6     2    30     7    35     6    48 0.89 Pyridine nucleotide-disulphide oxidoreductase
NAD_Gly3P_dh_N       PF01210.18   157 sp|O31616|GLOX_BACSU -            369     0.025   14.2   0.2   1   1   4.4e-05     0.054   13.2   0.2     3    28     8    33     6    39 0.90 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus
ApbA                 PF02558.11   151 sp|O31616|GLOX_BACSU -            369      0.12   11.8   0.2   1   1   0.00016      0.19   11.1   0.2     2    25     8    31     7    38 0.83 Ketopantoate reductase PanE/ApbA
Thi4                 PF01946.12   230 sp|O31616|GLOX_BACSU -            369      0.12   11.4   0.4   1   1   0.00024      0.29   10.1   0.4    20    54     7    40     3    54 0.83 Thi4 family
GIDA                 PF01134.17   392 sp|O31616|GLOX_BACSU -            369      0.15   10.8   1.4   1   1   0.00019      0.23   10.2   1.4     3    29     8    37     6    61 0.81 Glucose inhibited division protein A
DAO                  PF01266.19   358 sp|P18158|GLPD_BACSU -            555   1.4e-57  195.2   0.0   1   1   1.6e-60   2.6e-57  194.3   0.0     1   356    24   379    24   381 0.87 FAD dependent oxidoreductase
Pyr_redox_2          PF07992.9    201 sp|P18158|GLPD_BACSU -            555   1.8e-05   24.7   2.3   1   1   4.7e-07   0.00077   19.3   2.3     1   142    24   254    24   266 0.77 Pyridine nucleotide-disulphide oxidoreductase
FAD_oxidored         PF12831.2    428 sp|P18158|GLPD_BACSU -            555   2.9e-05   23.3   0.6   1   1     3e-08   4.9e-05   22.5   0.1     1    48    24    71    24   110 0.85 FAD dependent oxidoreductase
FAD_binding_2        PF00890.19   417 sp|P18158|GLPD_BACSU -            555   5.2e-05   22.2   1.1   1   2   3.6e-05     0.059   12.2   0.4     1    40    24    63    24    76 0.88 FAD binding domain
FAD_binding_2        PF00890.19   417 sp|P18158|GLPD_BACSU -            555   5.2e-05   22.2   1.1   2   2   0.00047      0.78    8.5   0.0   147   209   180   241   168   258 0.81 FAD binding domain
GIDA                 PF01134.17   392 sp|P18158|GLPD_BACSU -            555   0.00015   20.8   1.1   1   2   3.1e-05      0.05   12.4   0.5     1    29    24    52    24    72 0.84 Glucose inhibited division protein A
NAD_binding_8        PF13450.1     68 sp|P18158|GLPD_BACSU -            555   0.00056   19.8   0.3   1   1     1e-06    0.0017   18.3   0.3     1    40    27    66    27    85 0.85 NAD(P)-binding Rossmann-like domain
3HCDH_N              PF02737.13   180 sp|P18158|GLPD_BACSU -            555     0.039   13.6   0.2   1   1   6.2e-05       0.1   12.2   0.2     3    36    26    59    24    90 0.82 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain
Pyr_redox            PF00070.22    80 sp|P18158|GLPD_BACSU -            555     0.081   13.3   0.4   1   1   0.00025      0.41   11.0   0.1     2    32    25    55    24    85 0.92 Pyridine nucleotide-disulphide oxidoreductase
FAD_binding_3        PF01494.14   356 sp|P18158|GLPD_BACSU -            555      0.15   11.0   0.8   1   1   0.00037      0.61    9.0   0.8     3   253    24   312    22   335 0.71 FAD binding domain
MIP                  PF00230.15   227 sp|P18156|GLPF_BACSU -            274     1e-49  169.0  13.9   1   1   9.6e-54   1.4e-49  168.5  13.9    10   227     3   230     1   230 0.89 Major intrinsic protein
FGGY_N               PF00370.16   245 sp|P18157|GLPK_BACSU -            496   3.8e-92  308.0   0.0   1   1   9.9e-96   4.9e-92  307.6   0.0     1   245     4   251     4   251 0.99 FGGY family of carbohydrate kinases, N-terminal domain
FGGY_C               PF02782.11   198 sp|P18157|GLPK_BACSU -            496   1.9e-67  226.7   0.0   2   2   8.9e-71   4.4e-67  225.5   0.0     2   198   261   450   260   450 0.97 FGGY family of carbohydrate kinases, C-terminal domain
BcrAD_BadFG          PF01869.15   271 sp|P18157|GLPK_BACSU -            496     0.044   13.0   0.0   1   2   4.7e-05      0.23   10.7   0.0     3    65     8    76     6   156 0.83 BadF/BadG/BcrA/BcrD ATPase family
GDPD                 PF03009.12   256 sp|P37965|GLPQ_BACSU -            293   4.8e-66  222.8   0.1   1   1   7.4e-70   5.5e-66  222.6   0.1     1   255    43   284    43   285 0.93 Glycerophosphoryl diester phosphodiesterase family
GDPD_2               PF13653.1     30 sp|P37965|GLPQ_BACSU -            293   5.1e-05   23.3   0.7   2   2   2.4e-07    0.0018   18.4   0.2     5    30   259   284   258   284 0.97 Glycerophosphoryl diester phosphodiesterase family
MFS_1                PF07690.11   352 sp|P37948|GLPT_BACSU -            444   3.7e-53  180.4  40.9   1   2   4.4e-56   1.6e-52  178.3  32.1     1   351    34   399    30   400 0.81 Major Facilitator Superfamily
MFS_1                PF07690.11   352 sp|P37948|GLPT_BACSU -            444   3.7e-53  180.4  40.9   2   2   4.6e-05      0.17   10.5   3.6   130   172   393   434   392   443 0.82 Major Facilitator Superfamily
Nuc_H_symport        PF03825.11   400 sp|P37948|GLPT_BACSU -            444    0.0035   16.1  20.8   1   4   4.3e-06     0.016   14.0   3.1    25   101    51   130    25   134 0.75 Nucleoside H+ symporter
Nuc_H_symport        PF03825.11   400 sp|P37948|GLPT_BACSU -            444    0.0035   16.1  20.8   3   4     4e-05      0.15   10.7   0.3    21    81   275   333   257   366 0.81 Nucleoside H+ symporter
MFS_1_like           PF12832.2     77 sp|P37948|GLPT_BACSU -            444     0.039   13.7   0.0   1   3   1.1e-05     0.039   13.7   0.0    26    63    54    91    50   105 0.92 MFS_1 like family
Cytochrome-c551      PF10643.4    233 sp|P37948|GLPT_BACSU -            444      0.27   10.5   4.6   1   2   0.00025      0.92    8.7   2.1    67   105    83   122    65   146 0.85 Photosystem P840 reaction-centre cytochrome c-551
FBPase_glpX          PF03320.8    309 sp|Q03224|GLPX_BACSU -            321    2e-142  473.4   7.1   1   1  4.5e-146  2.2e-142  473.2   7.1     1   309     2   309     2   309 0.99 Bacterial fructose-1,6-bisphosphatase, glpX-encoded
RHH_4                PF13467.1     67 sp|Q03224|GLPX_BACSU -            321     0.021   14.7   0.0   2   2     2e-05       0.1   12.5   0.0    15    52   132   168   129   179 0.82 Ribbon-helix-helix domain
ADH_zinc_N           PF00107.21   130 sp|Q03224|GLPX_BACSU -            321      0.07   12.6   0.3   1   1   2.8e-05      0.14   11.7   0.3     9    86   146   229   143   271 0.80 Zinc-binding dehydrogenase
Glutaminase          PF04960.10   286 sp|O31465|GLSA1_BACSU -            327  2.7e-121  403.9   0.0   1   1  2.1e-125  3.1e-121  403.7   0.0     1   286    32   327    32   327 0.99 Glutaminase
Glutaminase          PF04960.10   286 sp|O07637|GLSA2_BACSU -            309  5.1e-124  412.9   0.3   1   1  3.9e-128  5.8e-124  412.7   0.3     1   286    23   309    23   309 1.00 Glutaminase
Glu_synthase         PF01645.12   368 sp|P39812|GLTA_BACSU -           1520    1e-166  554.4   0.0   1   2   0.00028      0.69    8.7   0.0   251   300   627   677   619   682 0.83 Conserved region in glutamate synthase
Glu_synthase         PF01645.12   368 sp|P39812|GLTA_BACSU -           1520    1e-166  554.4   0.0   2   2  1.1e-166  2.7e-163  543.1   0.0     1   368   799  1167   799  1167 0.99 Conserved region in glutamate synthase
GATase_2             PF00310.16   361 sp|P39812|GLTA_BACSU -           1520  7.8e-146  485.4   0.0   1   1  4.6e-149  1.1e-145  484.8   0.0     1   360    22   387    22   388 0.98 Glutamine amidotransferases class-II
Glu_syn_central      PF04898.9    288 sp|P39812|GLTA_BACSU -           1520  1.9e-119  398.2   0.0   1   1  1.7e-122  4.1e-119  397.1   0.0     2   287   462   741   461   742 0.99 Glutamate synthase central domain
GXGXG                PF01493.14   202 sp|P39812|GLTA_BACSU -           1520   1.2e-66  223.5  10.2   1   1   9.3e-70   2.3e-66  222.6  10.2     3   201  1244  1438  1242  1439 0.98 GXGXG motif
GATase_7             PF13537.1    125 sp|P39812|GLTA_BACSU -           1520     0.011   15.4   0.0   2   2   6.7e-05      0.17   11.6   0.0    67   123   337   391   323   393 0.87 Glutamine amidotransferase domain
Fer4_20              PF14691.1    111 sp|O34399|GLTB_BACSU -            493   1.1e-22   79.8   0.0   1   1   4.2e-25   1.8e-22   79.0   0.0     2   111    24   141    23   141 0.93 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster
Pyr_redox_2          PF07992.9    201 sp|O34399|GLTB_BACSU -            493     9e-19   68.1   0.2   1   1   3.4e-21   1.5e-18   67.4   0.2     1   199   154   464   154   466 0.87 Pyridine nucleotide-disulphide oxidoreductase
Pyr_redox_3          PF13738.1    203 sp|O34399|GLTB_BACSU -            493   1.8e-14   54.3   0.3   1   2   1.1e-07   4.9e-05   23.4   0.1     1    43   156   197   156   209 0.88 Pyridine nucleotide-disulphide oxidoreductase
Pyr_redox_3          PF13738.1    203 sp|O34399|GLTB_BACSU -            493   1.8e-14   54.3   0.3   2   2     8e-09   3.5e-06   27.2   0.0   126   198   237   324   202   328 0.78 Pyridine nucleotide-disulphide oxidoreductase
NAD_binding_8        PF13450.1     68 sp|O34399|GLTB_BACSU -            493     8e-11   41.8   0.0   1   2   8.9e-12   3.9e-09   36.4   0.1     1    36   157   192   157   205 0.90 NAD(P)-binding Rossmann-like domain
Pyr_redox            PF00070.22    80 sp|O34399|GLTB_BACSU -            493     8e-10   38.9   0.1   1   2   5.6e-08   2.4e-05   24.6   0.2     1    63   154   225   154   235 0.74 Pyridine nucleotide-disulphide oxidoreductase
Pyr_redox            PF00070.22    80 sp|O34399|GLTB_BACSU -            493     8e-10   38.9   0.1   2   2    0.0012      0.53   10.7   0.0     2    34   295   328   294   337 0.79 Pyridine nucleotide-disulphide oxidoreductase
NAD_binding_7        PF13241.1    103 sp|O34399|GLTB_BACSU -            493   6.1e-08   32.8   0.3   1   2   9.6e-06    0.0042   17.3   0.1     6    75   151   252   148   266 0.63 Putative NAD(P)-binding
NAD_binding_7        PF13241.1    103 sp|O34399|GLTB_BACSU -            493   6.1e-08   32.8   0.3   2   2   0.00024       0.1   12.8   0.0     2    32   287   317   286   335 0.94 Putative NAD(P)-binding
DAO                  PF01266.19   358 sp|O34399|GLTB_BACSU -            493   3.1e-07   29.6   2.4   1   3   3.9e-08   1.7e-05   23.9   0.3     1    36   154   189   154   195 0.95 FAD dependent oxidoreductase
FMO-like             PF00743.14   532 sp|O34399|GLTB_BACSU -            493   4.2e-07   28.5   0.1   1   2     2e-05    0.0087   14.3   0.0     2    41   153   192   152   198 0.95 Flavin-binding monooxygenase-like
FMO-like             PF00743.14   532 sp|O34399|GLTB_BACSU -            493   4.2e-07   28.5   0.1   2   2   9.2e-05      0.04   12.1   0.0   131   209   232   319   200   341 0.70 Flavin-binding monooxygenase-like
HI0933_like          PF03486.9    409 sp|O34399|GLTB_BACSU -            493   4.6e-07   28.6   2.0   1   2   7.5e-08   3.3e-05   22.5   0.1     2    36   154   188   153   193 0.94 HI0933-like protein
Amino_oxidase        PF01593.19   450 sp|O34399|GLTB_BACSU -            493   5.3e-07   29.0   0.6   1   2   1.2e-08   5.3e-06   25.7   0.2     2    29   163   190   162   192 0.96 Flavin containing amine oxidoreductase
FAD_binding_3        PF01494.14   356 sp|O34399|GLTB_BACSU -            493   1.7e-05   24.0   0.3   1   1   2.4e-07   0.00011   21.4   0.1     3    35   154   186   153   190 0.93 FAD binding domain
Thi4                 PF01946.12   230 sp|O34399|GLTB_BACSU -            493   2.5e-05   23.5   0.3   1   2   1.6e-06    0.0007   18.7   0.1    19    78   154   215   148   235 0.80 Thi4 family
FAD_binding_2        PF00890.19   417 sp|O34399|GLTB_BACSU -            493   2.9e-05   23.1   4.2   1   3   3.7e-07   0.00016   20.6   0.5     2    36   155   189   154   194 0.92 FAD binding domain
NAD_binding_9        PF13454.1    156 sp|O34399|GLTB_BACSU -            493   5.2e-05   23.0   0.2   1   2   0.00018     0.078   12.7   0.1     1    40   156   190   156   221 0.79 FAD-NAD(P)-binding
FAD_oxidored         PF12831.2    428 sp|O34399|GLTB_BACSU -            493   6.8e-05   22.1   0.2   1   2   1.6e-07   6.8e-05   22.1   0.2     2    58   155   211   154   293 0.73 FAD dependent oxidoreductase
K_oxygenase          PF13434.1    341 sp|O34399|GLTB_BACSU -            493   0.00022   20.2   0.3   3   3   0.00021      0.09   11.6   0.0   186   224   283   325   261   340 0.75 L-lysine 6-monooxygenase (NADPH-requiring)
DJ-1_PfpI            PF01965.19   147 sp|O34399|GLTB_BACSU -            493   0.00029   20.3   1.2   1   3   0.00077      0.33   10.3   0.0    70   101   151   184   148   213 0.89 DJ-1/PfpI family
NAD_Gly3P_dh_N       PF01210.18   157 sp|O34399|GLTB_BACSU -            493   0.00074   19.2   0.0   1   2   0.00012     0.054   13.2   0.0     1    32   154   185   154   254 0.79 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus
AlaDh_PNT_C          PF01262.16   168 sp|O34399|GLTB_BACSU -            493    0.0019   17.7   0.6   1   2   0.00021     0.092   12.3   0.1    17    53   149   185   136   188 0.87 Alanine dehydrogenase/PNT, C-terminal domain
ApbA                 PF02558.11   151 sp|O34399|GLTB_BACSU -            493    0.0064   15.9   0.2   1   1     7e-05     0.031   13.7   0.2     1    79   155   249   155   257 0.76 Ketopantoate reductase PanE/ApbA
GIDA                 PF01134.17   392 sp|O34399|GLTB_BACSU -            493    0.0071   15.2   5.1   1   3   0.00058      0.25   10.1   1.0     1    35   154   187   154   230 0.70 Glucose inhibited division protein A
Lycopene_cycl        PF05834.7    374 sp|O34399|GLTB_BACSU -            493     0.012   14.5   0.1   1   2    0.0019      0.82    8.5   0.1     2    31   155   182   154   189 0.80 Lycopene cyclase protein
2-Hacid_dh_C         PF02826.14   178 sp|O34399|GLTB_BACSU -            493     0.023   13.8   0.0   1   2   0.00089      0.39    9.8   0.0    28    70   144   186   124   202 0.81 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain
IlvN                 PF07991.7    165 sp|O34399|GLTB_BACSU -            493     0.023   14.0   1.0   1   1   0.00016      0.07   12.4   0.1     4    37   152   185   150   190 0.90 Acetohydroxy acid isomeroreductase, catalytic domain
3HCDH_N              PF02737.13   180 sp|O34399|GLTB_BACSU -            493      0.04   13.5   0.5   1   1   0.00029      0.13   11.9   0.1     1    34   154   187   154   238 0.82 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain
F420_oxidored        PF03807.12    96 sp|O34399|GLTB_BACSU -            493     0.061   13.7   0.8   1   1    0.0021      0.92    9.9   0.2     1    37   154   185   154   264 0.72 NADP oxidoreductase coenzyme F420-dependent
DUF364               PF04016.7    147 sp|O34399|GLTB_BACSU -            493     0.064   12.5   0.0   1   2    0.0015      0.64    9.3   0.0     9    42   150   186   146   212 0.84 Domain of unknown function (DUF364)
NAD_binding_2        PF03446.10   163 sp|O34399|GLTB_BACSU -            493     0.071   12.9   0.1   1   1   0.00093      0.41   10.4   0.1     2    41   153   191   152   311 0.75 NAD binding domain of 6-phosphogluconate dehydrogenase
UDPG_MGDP_dh_N       PF03721.9    185 sp|O34399|GLTB_BACSU -            493     0.088   12.1   0.1   1   1   0.00049      0.21   10.9   0.1     1    34   153   186   153   277 0.75 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain
SDF                  PF00375.13   390 sp|P39817|GLTP_BACSU -            414  2.7e-118  395.1  38.0   1   1  4.3e-122  3.2e-118  394.9  38.0     2   390     6   395     5   395 0.98 Sodium:dicarboxylate symporter family
SDF                  PF00375.13   390 sp|O07605|GLTT_BACSU -            429  1.5e-129  432.1  37.4   1   1  1.2e-133  1.7e-129  431.9  37.4     1   390     8   403     8   403 0.99 Sodium:dicarboxylate symporter family
Rhomboid             PF01694.17   146 sp|P54493|GLUP_BACSU -            507   8.3e-40  136.1  16.0   1   1   2.9e-42   1.7e-39  135.1  16.0     3   141   218   353   216   358 0.96 Rhomboid family
TPR_19               PF14559.1     68 sp|P54493|GLUP_BACSU -            507   8.8e-13   48.3  16.7   1   2   4.1e-08   2.4e-05   24.5   2.4     1    63   400   463   400   464 0.85 Tetratricopeptide repeat
TPR_19               PF14559.1     68 sp|P54493|GLUP_BACSU -            507   8.8e-13   48.3  16.7   2   2   3.3e-12     2e-09   37.6   6.6     5    68   438   501   434   501 0.97 Tetratricopeptide repeat
TPR_11               PF13414.1     69 sp|P54493|GLUP_BACSU -            507   5.1e-10   38.8   5.5   2   2   1.5e-12   8.8e-10   38.0   2.1     3    69   424   489   422   489 0.95 TPR repeat
TPR_16               PF13432.1     65 sp|P54493|GLUP_BACSU -            507   6.3e-10   39.4   1.3   1   1   1.1e-12   6.3e-10   39.4   1.3     6    63   433   490   430   492 0.93 Tetratricopeptide repeat
TPR_2                PF07719.12    34 sp|P54493|GLUP_BACSU -            507   1.6e-09   36.9   4.9   2   3     5e-05      0.03   14.2   0.0     2    34   425   457   424   457 0.90 Tetratricopeptide repeat
TPR_2                PF07719.12    34 sp|P54493|GLUP_BACSU -            507   1.6e-09   36.9   4.9   3   3   1.2e-06   0.00073   19.2   1.7     3    33   460   490   458   491 0.95 Tetratricopeptide repeat
TPR_1                PF00515.23    34 sp|P54493|GLUP_BACSU -            507     8e-08   31.5   6.5   3   3   1.8e-07   0.00011   21.6   1.9     3    33   460   490   458   491 0.95 Tetratricopeptide repeat
TPR_14               PF13428.1     44 sp|P54493|GLUP_BACSU -            507   7.5e-07   29.2   4.1   1   2   4.2e-06    0.0025   18.2   0.0     3    42   426   465   423   466 0.89 Tetratricopeptide repeat
TPR_14               PF13428.1     44 sp|P54493|GLUP_BACSU -            507   7.5e-07   29.2   4.1   2   2   0.00011     0.066   13.8   0.4     3    38   460   495   458   500 0.90 Tetratricopeptide repeat
TPR_17               PF13431.1     34 sp|P54493|GLUP_BACSU -            507   3.1e-06   26.9   0.9   1   1   2.1e-08   1.2e-05   25.0   0.9     1    34   446   479   446   481 0.95 Tetratricopeptide repeat
TPR_8                PF13181.1     34 sp|P54493|GLUP_BACSU -            507     4e-06   26.2   6.9   3   3   1.1e-06   0.00066   19.2   1.4     2    32   459   489   458   491 0.94 Tetratricopeptide repeat
Apc3                 PF12895.2     84 sp|P54493|GLUP_BACSU -            507   5.5e-06   26.4   8.9   1   2   7.8e-06    0.0046   17.0   0.4    24    84   389   450   373   450 0.81 Anaphase-promoting complex, cyclosome, subunit 3
Apc3                 PF12895.2     84 sp|P54493|GLUP_BACSU -            507   5.5e-06   26.4   8.9   2   2   3.5e-07   0.00021   21.3   2.7     3    55   438   489   436   500 0.85 Anaphase-promoting complex, cyclosome, subunit 3
TPR_7                PF13176.1     36 sp|P54493|GLUP_BACSU -            507     3e-05   23.5   3.8   1   2   7.6e-05     0.045   13.5   0.0     5    34   430   457   426   459 0.83 Tetratricopeptide repeat
TPR_12               PF13424.1     78 sp|P54493|GLUP_BACSU -            507   3.1e-05   23.8   5.6   1   2   0.00056      0.33   10.9   0.1    40    74   421   452   388   456 0.74 Tetratricopeptide repeat
TPR_12               PF13424.1     78 sp|P54493|GLUP_BACSU -            507   3.1e-05   23.8   5.6   2   2   6.1e-08   3.6e-05   23.6   2.9    17    77   436   489   423   490 0.84 Tetratricopeptide repeat
Coatomer_E           PF04733.9    290 sp|P54493|GLUP_BACSU -            507   0.00081   18.6   1.0   1   1   2.9e-06    0.0017   17.6   1.0   194   270   418   492   391   505 0.78 Coatomer epsilon subunit
Fis1_TPR_C           PF14853.1     53 sp|P54493|GLUP_BACSU -            507    0.0016   18.2   4.0   1   2    0.0003      0.18   11.7   0.0     7    35   430   458   425   460 0.92 Fis1 C-terminal tetratricopeptide repeat
TPR_9                PF13371.1     73 sp|P54493|GLUP_BACSU -            507    0.0024   17.6   0.5   1   1   1.6e-05    0.0092   15.8   0.2     9    72   438   501   433   502 0.92 Tetratricopeptide repeat
TPR_5                PF12688.2    120 sp|P54493|GLUP_BACSU -            507    0.0035   17.3   0.7   1   2   0.00016     0.097   12.7   0.3    35    99   387   448   374   451 0.82 Tetratrico peptide repeat
TPR_15               PF13429.1    280 sp|P54493|GLUP_BACSU -            507    0.0047   16.0   5.3   1   1   5.6e-05     0.033   13.2   5.2   108   202   388   480   381   497 0.77 Tetratricopeptide repeat
Type_III_YscG        PF09477.5    116 sp|P54493|GLUP_BACSU -            507     0.012   15.6   0.1   1   1   5.1e-05      0.03   14.3   0.1    38   101   388   456   382   465 0.78 Bacterial type II secretion system chaperone protein (type_III_yscG)
TPR_20               PF14561.1     90 sp|P54493|GLUP_BACSU -            507     0.012   15.6   7.2   3   3   3.8e-05     0.022   14.8   1.7     7    53   443   489   439   500 0.83 Tetratricopeptide repeat
TPR_6                PF13174.1     33 sp|P54493|GLUP_BACSU -            507     0.032   14.6  10.3   1   2    0.0015      0.91   10.1   0.1     6    32   430   456   416   457 0.88 Tetratricopeptide repeat
BTAD                 PF03704.12   146 sp|P54493|GLUP_BACSU -            507      0.12   12.7   5.8   1   1   7.2e-05     0.043   14.1   2.0    24   123   389   485   384   499 0.85 Bacterial transcriptional activator domain
T2SM                 PF04612.7    160 sp|P54493|GLUP_BACSU -            507      0.17   11.6   0.1   1   1   0.00029      0.17   11.6   0.1    16    55   364   403   363   432 0.79 Type II secretion system (T2SS), protein M
Glyco_hydro_4C       PF11975.3    232 sp|P54716|GLVA_BACSU -            449   5.9e-85  284.7   0.2   1   1   1.2e-88   8.6e-85  284.2   0.2     1   232   191   417   191   417 0.99 Family 4 glycosyl hydrolase C-terminal domain
Glyco_hydro_4        PF02056.11   183 sp|P54716|GLVA_BACSU -            449   1.4e-77  259.1   0.0   1   1   2.7e-81     2e-77  258.6   0.0     1   182     7   186     7   187 0.99 Family 4 glycosyl hydrolase
Gly_kinase           PF02595.10   378 sp|P42100|GLXK_BACSU -            382    5e-186  617.9  10.8   1   1  7.7e-190  5.7e-186  617.7  10.8     1   377     1   377     1   378 1.00 Glycerate kinase family
AIRS                 PF00586.19    96 sp|P42100|GLXK_BACSU -            382     0.018   15.3   0.7   1   2   1.9e-05      0.14   12.3   0.2     6    93   206   321   201   321 0.78 AIR synthase related protein, N-terminal domain
SHMT                 PF00464.14   399 sp|P39148|GLYA_BACSU -            415  2.2e-187  622.3   0.4   1   1  1.4e-190  2.6e-187  622.0   0.4     3   399     6   380     4   380 0.99 Serine hydroxymethyltransferase
Beta_elim_lyase      PF01212.16   290 sp|P39148|GLYA_BACSU -            415   1.1e-10   41.2   0.0   1   1   9.4e-14   1.7e-10   40.5   0.0    21   235    57   315    42   406 0.82 Beta-eliminating lyase
Aminotran_1_2        PF00155.16   363 sp|P39148|GLYA_BACSU -            415   1.4e-10   40.6   0.0   1   1   1.3e-13   2.4e-10   39.9   0.0    65   352    84   364    31   369 0.75 Aminotransferase class I and II
Aminotran_5          PF00266.14   371 sp|P39148|GLYA_BACSU -            415   1.4e-05   24.0   0.1   1   2   2.6e-08   4.9e-05   22.2   0.0    48   224    74   249    35   256 0.78 Aminotransferase class-V
Cys_Met_Meta_PP      PF01053.15   386 sp|P39148|GLYA_BACSU -            415   0.00069   18.0   0.0   1   1   5.4e-07   0.00099   17.4   0.0    67   216    81   237    61   300 0.78 Cys/Met metabolism PLP-dependent enzyme
DegT_DnrJ_EryC1      PF01041.12   363 sp|P39148|GLYA_BACSU -            415   0.00073   18.6   0.1   1   1   7.5e-07    0.0014   17.7   0.0    34   157    78   208    75   245 0.85 DegT/DnrJ/EryC1/StrS aminotransferase family
SelA                 PF03841.8    367 sp|P39148|GLYA_BACSU -            415     0.055   12.2   0.0   1   2   0.00016      0.29    9.8   0.0    99   235   120   248    71   251 0.69 L-seryl-tRNA selenium transferase
OKR_DC_1             PF01276.15   417 sp|P39148|GLYA_BACSU -            415     0.099   11.1   0.2   1   2   0.00013      0.24    9.8   0.1    71   208    74   202    65   307 0.79 Orn/Lys/Arg decarboxylase, major domain
Glyco_hydro_1        PF00232.13   455 sp|O05508|GMUD_BACSU -            465  2.7e-141  470.8   4.9   1   1  4.2e-145  3.1e-141  470.6   4.9     3   454     7   464     5   465 0.93 Glycosyl hydrolase family 1
Cellulase            PF00150.13   281 sp|O05508|GMUD_BACSU -            465   2.3e-07   30.2   0.1   1   1   5.7e-11   4.2e-07   29.4   0.1    21   123    62   173    32   177 0.85 Cellulase (glycosyl hydrolase family 5)
UPF0052              PF01933.13   301 sp|O06974|GNGF_BACSU -            317  2.5e-103  345.5   0.1   1   1  1.9e-107  2.8e-103  345.3   0.1     2   299     8   294     7   296 0.98 Uncharacterised protein family UPF0052
FGGY_N               PF00370.16   245 sp|P12011|GNTK_BACSU -            513   1.4e-81  273.4   0.0   1   1   6.7e-85     2e-81  272.9   0.0     1   245     4   246     4   246 1.00 FGGY family of carbohydrate kinases, N-terminal domain
FGGY_C               PF02782.11   198 sp|P12011|GNTK_BACSU -            513   1.8e-38  132.1   0.0   1   1     1e-41   3.1e-38  131.4   0.0     2   198   256   452   255   452 0.88 FGGY family of carbohydrate kinases, C-terminal domain
BcrAD_BadFG          PF01869.15   271 sp|P12011|GNTK_BACSU -            513   4.2e-07   29.5   0.0   1   3   3.1e-09     9e-06   25.1   0.0     1    54     6    58     6   294 0.79 BadF/BadG/BcrA/BcrD ATPase family
ROK                  PF00480.15   179 sp|P12011|GNTK_BACSU -            513   0.00021   21.1   0.0   1   1   1.4e-07   0.00041   20.2   0.0     1    80     7   101     7   122 0.82 ROK family
MutL                 PF13941.1    457 sp|P12011|GNTK_BACSU -            513     0.067   11.5   0.0   1   1   3.4e-05       0.1   10.9   0.0     3    74     6    80     4    84 0.72 MutL protein
GntP_permease        PF02447.11   441 sp|P12012|GNTP_BACSU -            448  1.6e-183  610.2  51.3   1   1  2.4e-187  1.8e-183  610.0  51.3     1   441     1   447     1   447 0.98 GntP family permease
CitMHS               PF03600.11   351 sp|P12012|GNTP_BACSU -            448   2.3e-09   36.3  39.1   1   1   3.1e-13   2.3e-09   36.3  39.1     4   332     8   382     5   397 0.79 Citrate transporter
NAD_Gly3P_dh_N       PF01210.18   157 sp|P46919|GPDA_BACSU -            345   9.4e-57  191.1   0.3   1   1   1.6e-59   1.4e-56  190.6   0.3     1   156     3   161     3   162 0.99 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus
NAD_Gly3P_dh_C       PF07479.9    149 sp|P46919|GPDA_BACSU -            345   1.7e-54  183.6   0.4   1   1   4.4e-57   3.8e-54  182.4   0.4     2   149   181   324   180   324 0.99 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus
F420_oxidored        PF03807.12    96 sp|P46919|GPDA_BACSU -            345   2.5e-11   43.8   0.4   1   1   1.6e-13   1.4e-10   41.4   0.1     1    94     3   105     3   107 0.89 NADP oxidoreductase coenzyme F420-dependent
ApbA                 PF02558.11   151 sp|P46919|GPDA_BACSU -            345   9.7e-10   38.0   0.1   1   1   2.3e-12     2e-09   37.0   0.1     2   105     5   109     4   124 0.80 Ketopantoate reductase PanE/ApbA
NAD_binding_2        PF03446.10   163 sp|P46919|GPDA_BACSU -            345   7.2e-09   35.6   0.1   1   1   2.3e-11     2e-08   34.2   0.1     1    95     1   106     1   123 0.89 NAD binding domain of 6-phosphogluconate dehydrogenase
IlvN                 PF07991.7    165 sp|P46919|GPDA_BACSU -            345   6.9e-07   28.7   0.2   1   1   4.5e-09     4e-06   26.3   0.2     5    96     2   107     1   112 0.75 Acetohydroxy acid isomeroreductase, catalytic domain
UDPG_MGDP_dh_N       PF03721.9    185 sp|P46919|GPDA_BACSU -            345   1.1e-06   28.1   0.1   1   1   3.2e-09   2.8e-06   26.8   0.1     2    88     3    83     2   112 0.88 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain
3HCDH_N              PF02737.13   180 sp|P46919|GPDA_BACSU -            345   2.1e-05   24.2   0.1   1   1   6.4e-08   5.6e-05   22.8   0.1     1   120     3   111     3   119 0.81 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain
PDH                  PF02153.12   258 sp|P46919|GPDA_BACSU -            345   8.6e-05   21.5   0.1   1   1   1.9e-07   0.00016   20.6   0.1    36    76    61   102    40   107 0.81 Prephenate dehydrogenase
Rossmann-like        PF10727.4    127 sp|P46919|GPDA_BACSU -            345    0.0078   15.9   0.2   1   1   5.2e-05     0.045   13.4   0.1    12   105     3   106     2   110 0.75 Rossmann-like domain
2-Hacid_dh_C         PF02826.14   178 sp|P46919|GPDA_BACSU -            345     0.014   14.5   0.3   1   1   0.00019      0.16   11.0   0.1    37   129     2   107     1   116 0.72 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain
GFO_IDH_MocA         PF01408.17   120 sp|P46919|GPDA_BACSU -            345     0.024   15.1   0.0   1   1   8.1e-05     0.071   13.6   0.0     2    83     3    92     2   102 0.74 Oxidoreductase family, NAD-binding Rossmann fold
OTCace               PF00185.19   158 sp|P46919|GPDA_BACSU -            345     0.026   14.3   0.1   1   1   6.4e-05     0.056   13.3   0.1     4    89     3    83     1   107 0.62 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain
UDPG_MGDP_dh_C       PF03720.10   106 sp|P46919|GPDA_BACSU -            345     0.034   14.2   0.1   1   1   8.4e-05     0.073   13.2   0.1    51    98    56   102    20   109 0.78 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain
Glyco_hydro_4        PF02056.11   183 sp|P46919|GPDA_BACSU -            345     0.049   12.9   0.3   1   2   0.00034       0.3   10.3   0.1     1    81     3    79     3    91 0.72 Family 4 glycosyl hydrolase
NAD_binding_10       PF13460.1    183 sp|P46919|GPDA_BACSU -            345     0.063   13.2   0.1   1   1   0.00013      0.11   12.4   0.1     4   103     7   142     4   176 0.60 NADH(P)-binding
NAD_binding_7        PF13241.1    103 sp|P46919|GPDA_BACSU -            345     0.078   13.2   0.1   1   1   0.00022      0.19   12.0   0.1     8    79     2    90     1   107 0.71 Putative NAD(P)-binding
Metalloenzyme        PF01676.13   252 sp|P39773|GPMI_BACSU -            511   5.6e-91  304.3   0.1   1   1   1.7e-94   6.5e-91  304.1   0.1     1   251     4   505     4   506 0.99 Metalloenzyme superfamily
iPGM_N               PF06415.8    223 sp|P39773|GPMI_BACSU -            511   1.1e-90  302.8   0.1   1   1   4.2e-94   1.6e-90  302.3   0.1     1   223    82   308    82   308 0.99 BPG-independent PGAM N-terminus (iPGM_N)
Phosphodiest         PF01663.17   365 sp|P39773|GPMI_BACSU -            511   6.3e-07   29.0   0.0   1   1   3.4e-10   1.3e-06   28.0   0.0   172   249   380   456   343   490 0.82 Type I phosphodiesterase / nucleotide pyrophosphatase
PglZ                 PF08665.7    181 sp|P39773|GPMI_BACSU -            511     0.042   13.5   0.0   1   1   2.8e-05       0.1   12.2   0.0   108   174   386   447   341   449 0.73 PglZ domain
Peptidase_A25        PF03418.9    354 sp|P22322|GPR_BACSU  -            368  7.9e-226  748.4   3.3   1   1  1.2e-229  8.9e-226  748.2   3.3     1   354    18   368    18   368 1.00 Germination protease
DUF1256              PF06866.6    164 sp|P22322|GPR_BACSU  -            368   2.1e-05   23.7   0.1   2   2   4.6e-06     0.034   13.3   0.1    75   122   173   222   164   237 0.81 Protein of unknown function (DUF1256)
DivIVA               PF05103.8    131 sp|P0CI74|GPSB_BACSU -             98   2.2e-24   86.0   8.1   1   2   4.4e-24     6e-21   74.8   6.2     1    61     8    68     8    73 0.94 DivIVA protein
DivIVA               PF05103.8    131 sp|P0CI74|GPSB_BACSU -             98   2.2e-24   86.0   8.1   2   2   7.4e-05     0.099   12.6   0.0   106   131    68    93    65    93 0.88 DivIVA protein
CCDC92               PF14916.1     61 sp|P0CI74|GPSB_BACSU -             98   0.00094   18.7   2.0   1   1   1.3e-06    0.0018   17.8   2.0    26    57    44    75    42    79 0.83 Coiled-coil domain of unknown function
HALZ                 PF02183.13    45 sp|P0CI74|GPSB_BACSU -             98    0.0015   18.1   2.9   1   1     2e-06    0.0027   17.3   1.6    13    41    40    68    38    71 0.91 Homeobox associated leucine zipper
ZYG-11_interact      PF05884.7    299 sp|P0CI74|GPSB_BACSU -             98    0.0025   16.9   0.1   1   1   1.9e-06    0.0026   16.9   0.1    23    70    24    70     9    93 0.73 Interactor of ZYG-11
Herpes_BLRF2         PF05812.7    118 sp|P0CI74|GPSB_BACSU -             98    0.0035   17.1   1.9   1   1   3.8e-06    0.0051   16.6   1.9     4    34    40    70    38    91 0.82 Herpesvirus BLRF2 protein
Seryl_tRNA_N         PF02403.17   108 sp|P0CI74|GPSB_BACSU -             98     0.012   15.6   2.9   1   1   1.1e-05     0.015   15.3   2.9    21    68    23    71     6    91 0.81 Seryl-tRNA synthetase N-terminal domain
DUF3810              PF12725.2    318 sp|P0CI74|GPSB_BACSU -             98     0.027   13.3   1.3   1   1   2.1e-05     0.029   13.2   1.3    84   139    14    69    10    97 0.72 Protein of unknown function (DUF3810)
NYD-SP28_assoc       PF14775.1     60 sp|P0CI74|GPSB_BACSU -             98     0.037   13.7   1.5   1   1   5.2e-05      0.07   12.8   1.5    36    58    42    64    36    66 0.87 Sperm tail C-terminal domain
DUF4446              PF14584.1    152 sp|P0CI74|GPSB_BACSU -             98     0.066   13.0   2.0   1   1   6.6e-05     0.089   12.6   2.0    29    83    14    68     5    75 0.91 Protein of unknown function (DUF4446)
UCH                  PF00443.24   269 sp|P0CI74|GPSB_BACSU -             98      0.15   11.1   2.4   1   1   0.00012      0.17   10.9   2.4    77   117    10    63     4    90 0.66 Ubiquitin carboxyl-terminal hydrolase
GreA_GreB_N          PF03449.10    74 sp|P80240|GREA_BACSU -            157     5e-28   96.9   2.0   1   1   1.4e-31   6.9e-28   96.5   2.0     3    74     4    77     2    77 0.96 Transcription elongation factor, N-terminal
GreA_GreB            PF01272.14    77 sp|P80240|GREA_BACSU -            157   9.2e-27   92.5   0.9   1   1   3.4e-30   1.7e-26   91.7   0.9     4    76    85   157    81   157 0.97 Transcription elongation factor, GreA/GreB, C-term
Kri1                 PF05178.7    101 sp|P80240|GREA_BACSU -            157     0.006   16.8   1.0   1   1   1.9e-06    0.0093   16.2   1.0     5    42    11    48     9    86 0.80 KRI1-like family
GrpE                 PF01025.14   166 sp|P15874|GRPE_BACSU -            187     5e-54  182.3  16.1   1   1   1.2e-57   9.1e-54  181.4  16.1     4   166    25   187     3   187 0.96 GrpE
Fis1_TPR_C           PF14853.1     53 sp|P15874|GRPE_BACSU -            187     0.051   13.4   2.2   2   2   2.1e-05      0.16   11.9   0.1    20    45    92   117    88   131 0.88 Fis1 C-terminal tetratricopeptide repeat
Aldo_ket_red         PF00248.16   283 sp|O32210|GR_BACSU   -            276     1e-64  218.1   0.3   1   1   1.7e-68   1.2e-64  217.8   0.3    13   282    27   262    19   263 0.96 Aldo/keto reductase family
HAD_2                PF13419.1    176 sp|O32210|GR_BACSU   -            276    0.0088   16.2   0.2   1   2   4.8e-06     0.036   14.2   0.1    46   123    84   164    65   170 0.82 Haloacid dehalogenase-like hydrolase
Flavodoxin_2         PF02525.12   199 sp|P80871|GS14_BACSU -            175   1.8e-48  164.6   0.1   1   1   5.9e-52   2.2e-48  164.4   0.1     1   197     1   168     1   171 0.92 Flavodoxin-like fold
FMN_red              PF03358.10   152 sp|P80871|GS14_BACSU -            175   6.4e-06   25.7   0.0   1   1     2e-09   7.5e-06   25.5   0.0    35   119    29   111     1   149 0.78 NADPH-dependent FMN reductase
Flavodoxin_4         PF12682.2    156 sp|P80871|GS14_BACSU -            175     0.006   15.9   0.3   1   1     3e-06     0.011   15.0   0.3    63    94    46    77    12    89 0.79 Flavodoxin
YfcL                 PF08891.6     85 sp|P80871|GS14_BACSU -            175     0.065   13.2   0.0   1   1   3.6e-05      0.13   12.2   0.0    51    81     7    39     2    43 0.85 YfcL protein
DJ-1_PfpI            PF01965.19   147 sp|P80876|GS18_BACSU -            172     1e-42  145.0   0.1   1   1   6.8e-46   1.3e-42  144.7   0.1     2   146    32   170    31   171 0.97 DJ-1/PfpI family
DUF4066              PF13278.1    166 sp|P80876|GS18_BACSU -            172   1.2e-14   53.8   0.0   1   1   8.2e-18   1.5e-14   53.5   0.0     5   151    12   153     8   155 0.86 Putative amidotransferase
GATase               PF00117.23   192 sp|P80876|GS18_BACSU -            172   1.8e-06   27.5   0.0   1   1   1.2e-09   2.1e-06   27.3   0.0    16    91    24   116    13   169 0.70 Glutamine amidotransferase class-I
GATase_3             PF07685.9    158 sp|P80876|GS18_BACSU -            172   0.00033   20.2   0.0   1   1   2.9e-07   0.00053   19.6   0.0     5    69    63   118    59   161 0.68 CobB/CobQ-like glutamine amidotransferase domain
GATase_5             PF13507.1    259 sp|P80876|GS18_BACSU -            172    0.0023   16.8   0.0   1   1   5.4e-06      0.01   14.7   0.0    17   115    20   122    15   136 0.69 CobB/CobQ-like glutamine amidotransferase domain
Peptidase_C26        PF07722.8    217 sp|P80876|GS18_BACSU -            172     0.015   14.7   0.0   1   1   1.2e-05     0.022   14.1   0.0    99   122    90   113    57   155 0.83 Peptidase C26
SNO                  PF01174.14   188 sp|P80876|GS18_BACSU -            172     0.032   13.8   0.0   1   1   2.2e-05     0.041   13.5   0.0    31    95    63   124    23   152 0.69 SNO glutamine amidotransferase family
Glyco_transf_4       PF13439.1    177 sp|P80876|GS18_BACSU -            172     0.097   12.3   0.0   1   1   0.00011       0.2   11.3   0.0    20   112    20   108    18   139 0.65 Glycosyltransferase Family 4
adh_short            PF00106.20   167 sp|P80873|GS39_BACSU -            286   8.8e-32  110.3   0.0   1   1   6.6e-35   1.1e-31  110.0   0.0     1   165    43   208    43   210 0.97 short chain dehydrogenase
adh_short_C2         PF13561.1    241 sp|P80873|GS39_BACSU -            286   9.8e-29  100.8   0.0   1   1   7.4e-32   1.2e-28  100.5   0.0     5   239    51   281    48   282 0.93 Enoyl-(Acyl carrier protein) reductase
KR                   PF08659.5    181 sp|P80873|GS39_BACSU -            286   1.4e-12   47.6   0.0   1   1   1.2e-15   2.1e-12   47.1   0.0     3   166    45   208    44   225 0.86 KR domain
Eno-Rase_NADH_b      PF12242.3     78 sp|P80873|GS39_BACSU -            286    0.0043   16.8   0.8   1   1   5.7e-06    0.0094   15.7   0.6    33    73    37    74    27    81 0.70 NAD(P)H binding domain of trans-2-enoyl-CoA reductase
Epimerase            PF01370.16   236 sp|P80873|GS39_BACSU -            286    0.0046   16.4   0.0   1   1   3.4e-06    0.0056   16.1   0.0     1    84    45   139    45   208 0.82 NAD dependent epimerase/dehydratase family
PA                   PF02225.17   101 sp|P80873|GS39_BACSU -            286     0.017   14.7   0.1   1   1   1.9e-05     0.031   13.9   0.1    25    79    33    87    23   104 0.77 PA domain
PTA_PTB              PF01515.14   319 sp|P80873|GS39_BACSU -            286     0.043   12.8   0.1   1   1   3.7e-05     0.061   12.3   0.1    10    88    37   115    31   133 0.91 Phosphate acetyl/butaryl transferase
NmrA                 PF05368.8    233 sp|P80873|GS39_BACSU -            286     0.051   12.8   0.3   1   1   6.9e-05      0.11   11.6   0.1     2    64    46   113    45   119 0.90 NmrA-like family
PS_pyruv_trans       PF04230.8    286 sp|P42101|GS30_BACSU -            343   2.1e-30  106.4   0.0   1   1   6.2e-34   3.1e-30  105.8   0.0     1   285    41   284    41   285 0.77 Polysaccharide pyruvyl transferase
SOR                  PF07682.6    303 sp|P42101|GS30_BACSU -            343     0.026   13.1   0.0   1   1   8.6e-06     0.042   12.4   0.0    15    88   244   316   234   322 0.86 Sulphur oxygenase reductase
Aldo_ket_red         PF00248.16   283 sp|P80874|GS69_BACSU -            331   5.2e-75  251.8   0.0   1   1     4e-79   5.9e-75  251.6   0.0     1   282    15   310    15   311 0.98 Aldo/keto reductase family
Aminotran_3          PF00202.16   339 sp|P71084|GSAB_BACSU -            429   4.9e-65  219.6   0.3   1   1   1.5e-68   7.3e-65  219.0   0.3     2   333    38   358    37   364 0.89 Aminotransferase class-III
Aminotran_3          PF00202.16   339 sp|P30949|GSA_BACSU  -            430   9.5e-72  241.6   0.0   1   1   1.7e-75   1.2e-71  241.3   0.0     2   338    39   362    38   363 0.97 Aminotransferase class-III
Aminotran_1_2        PF00155.16   363 sp|P30949|GSA_BACSU  -            430    0.0018   17.2   0.0   1   1   3.7e-07    0.0028   16.6   0.0    30   358    74   415    64   419 0.70 Aminotransferase class I and II
Glyco_transf_8       PF01501.15   250 sp|P25148|GSPA_BACSU -            286   3.3e-59  200.2   0.7   1   1   2.8e-63   4.1e-59  199.9   0.7     1   249     8   258     8   259 0.96 Glycosyl transferase family 8
NTP_transferase      PF00483.18   248 sp|Q05852|GTAB_BACSU -            292   1.8e-33  115.9   0.0   1   1   9.7e-37   2.9e-33  115.2   0.0     1   235     6   258     6   269 0.89 Nucleotidyl transferase
NTP_transf_3         PF12804.2    160 sp|Q05852|GTAB_BACSU -            292   1.2e-09   38.4   0.0   1   1   5.6e-13   1.7e-09   37.9   0.0     1   119     7   157     7   216 0.81 MobA-like NTP transferase domain
CTP_transf_3         PF02348.14   217 sp|Q05852|GTAB_BACSU -            292    0.0028   17.3   0.1   1   1   1.5e-06    0.0045   16.6   0.1    16    92    27   102    24   107 0.77 Cytidylyltransferase
Glycos_transf_2      PF00535.21   169 sp|Q05852|GTAB_BACSU -            292    0.0046   16.6   0.0   1   1   2.5e-06    0.0075   15.9   0.0    44   127    86   172    81   210 0.74 Glycosyl transferase family 2
IspD                 PF01128.14   221 sp|Q05852|GTAB_BACSU -            292     0.032   13.7   0.0   1   1   1.8e-05     0.054   13.0   0.0     3    55     7    61     5    73 0.81 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase
NIF3                 PF01784.13   242 sp|P54472|GTPC1_BACSU -            373   1.9e-73  246.9   0.5   1   1   1.7e-77   2.6e-73  246.5   0.5     1   238     9   350     9   358 0.99 NIF3 (NGG1p interacting factor 3)
IMPDH                PF00478.20   352 sp|O05269|GUAC_BACSU -            326  2.9e-104  348.7   0.2   1   1  4.9e-107  4.5e-104  348.1   0.2     2   346     4   321     3   326 0.93 IMP dehydrogenase / GMP reductase domain
FMN_dh               PF01070.13   357 sp|O05269|GUAC_BACSU -            326   1.8e-10   40.2   0.4   1   2    0.0001     0.096   11.5   0.0    25    80     2    57     1   120 0.83 FMN-dependent dehydrogenase
FMN_dh               PF01070.13   357 sp|O05269|GUAC_BACSU -            326   1.8e-10   40.2   0.4   2   2   3.2e-09     3e-06   26.3   0.6   215   312   129   233    70   241 0.74 FMN-dependent dehydrogenase
His_biosynth         PF00977.16   229 sp|O05269|GUAC_BACSU -            326   4.9e-07   29.2   0.1   2   2   3.7e-07   0.00035   19.9   0.0    58   106   186   234   169   249 0.81 Histidine biosynthesis protein
NMO                  PF03060.10   330 sp|O05269|GUAC_BACSU -            326   1.1e-06   28.1   2.0   1   1   2.7e-09   2.5e-06   26.9   1.8   129   236   131   247    94   255 0.76 Nitronate monooxygenase
TMP-TENI             PF02581.12   180 sp|O05269|GUAC_BACSU -            326   9.2e-05   21.6   0.4   1   1   1.9e-07   0.00017   20.7   0.4    85   175   131   228   117   232 0.83 Thiamine monophosphate synthase/TENI
PcrB                 PF01884.12   231 sp|O05269|GUAC_BACSU -            326   0.00059   19.1   0.5   1   2   0.00078      0.73    9.0   0.1   146   211   104   168    85   170 0.86 PcrB family
ThiG                 PF05690.9    247 sp|O05269|GUAC_BACSU -            326    0.0017   17.4   0.2   1   1   3.7e-06    0.0034   16.4   0.2   155   208   181   234    95   241 0.76 Thiazole biosynthesis protein ThiG
DHO_dh               PF01180.16   295 sp|O05269|GUAC_BACSU -            326    0.0018   17.2   2.1   2   2   5.6e-06    0.0052   15.7   0.1   246   276   203   233   190   247 0.86 Dihydroorotate dehydrogenase
Aldolase             PF01081.14   196 sp|O05269|GUAC_BACSU -            326    0.0084   15.2   0.1   1   1   4.1e-05     0.038   13.1   0.0    36    82   116   163    79   174 0.73 KDPG and KHG aldolase
Glu_synthase         PF01645.12   368 sp|O05269|GUAC_BACSU -            326     0.044   12.6   0.5   1   1   9.1e-05     0.085   11.7   0.5   277   304   204   231    95   234 0.89 Conserved region in glutamate synthase
B12-binding          PF02310.14   121 sp|O05269|GUAC_BACSU -            326     0.046   13.5   0.0   1   1   8.9e-05     0.083   12.7   0.0    39   111    97   168    51   176 0.78 B12 binding domain
PALP                 PF00291.20   306 sp|O05269|GUAC_BACSU -            326     0.052   12.7   0.0   1   1   0.00015      0.14   11.3   0.0    85   175    65   149    60   151 0.79 Pyridoxal-phosphate dependent enzyme
dCMP_cyt_deam_1      PF00383.17   102 sp|O34598|GUAD_BACSU -            156   3.3e-25   87.6   0.5   1   1   8.3e-29   4.1e-25   87.3   0.5     3   101     2   101     1   102 0.97 Cytidine and deoxycytidylate deaminase zinc-binding region
MafB19-deam          PF14437.1    146 sp|O34598|GUAD_BACSU -            156    0.0024   17.5   0.1   1   1   5.8e-07    0.0029   17.2   0.1    69   118    40    90    14    97 0.80 MafB19-like deaminase
APOBEC_N             PF08210.6    188 sp|O34598|GUAD_BACSU -            156     0.044   13.4   0.1   1   1   1.4e-05     0.067   12.8   0.1    47    97    47    91    29    96 0.85 APOBEC-like N-terminal domain
Glyco_hydro_16       PF00722.16   185 sp|P04957|GUB_BACSU  -            242   5.3e-51  172.5   4.5   1   1   8.8e-55   6.5e-51  172.2   4.5     1   185    54   238    54   238 0.93 Glycosyl hydrolases family 16
Laminin_G_3          PF13385.1    157 sp|P04957|GUB_BACSU  -            242      0.21   11.7  10.9   1   1   6.7e-05       0.5   10.6  10.9    31   130   108   224    18   240 0.74 Concanavalin A-like lectin/glucanases superfamily
ELFV_dehydrog        PF00208.16   244 sp|P50735|GUDB_BACSU -            427   3.7e-78  262.4   0.3   1   1   1.6e-81     6e-78  261.7   0.3     1   244   194   425   194   425 0.97 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase
ELFV_dehydrog_N      PF02812.13   131 sp|P50735|GUDB_BACSU -            427   1.7e-49  166.7   0.0   1   1   7.8e-53   2.9e-49  165.9   0.0     1   130    45   177    45   178 0.98 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain
2-Hacid_dh_C         PF02826.14   178 sp|P50735|GUDB_BACSU -            427    0.0043   16.2   0.0   1   1   2.2e-06     0.008   15.3   0.0    24    67   212   255   196   292 0.83 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain
NAD_binding_7        PF13241.1    103 sp|P50735|GUDB_BACSU -            427     0.012   15.8   0.0   1   1   8.2e-06      0.03   14.5   0.0     3    92   220   329   219   335 0.61 Putative NAD(P)-binding
MR_MLE_C             PF13378.1    111 sp|P42238|GUDD_BACSU -            455   4.3e-27   94.2   0.3   1   1   1.8e-30   9.1e-27   93.2   0.3     1   111   299   410   299   410 0.83 Enolase C-terminal domain-like
MR_MLE               PF01188.16    67 sp|P42238|GUDD_BACSU -            455   2.3e-11   44.0   0.9   2   2   4.9e-14   2.4e-10   40.7   0.0     2    66   230   298   229   299 0.90 Mandelate racemase / muconate lactonizing enzyme, C-terminal domain
MR_MLE_N             PF02746.11   117 sp|P42238|GUDD_BACSU -            455   0.00035   20.5   0.0   1   1   1.4e-07   0.00068   19.6   0.0    65   117    80   147    47   147 0.70 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain
MFS_1                PF07690.11   352 sp|P42237|GUDP_BACSU -            455   3.2e-59  200.4  41.8   1   2   7.5e-54   3.7e-50  170.6  25.0     1   274    25   318    25   323 0.87 Major Facilitator Superfamily
MFS_1                PF07690.11   352 sp|P42237|GUDP_BACSU -            455   3.2e-59  200.4  41.8   2   2   7.8e-13   3.9e-09   35.7   9.6    60   182   323   443   319   454 0.76 Major Facilitator Superfamily
Sugar_tr             PF00083.19   451 sp|P42237|GUDP_BACSU -            455   3.1e-09   35.9  38.7   1   1   3.8e-12   1.9e-08   33.3  38.7    14   436    19   433     8   447 0.81 Sugar (and other) transporter
Cellulase            PF00150.13   281 sp|P10475|GUN2_BACSU -            499   5.5e-61  206.2   8.5   1   1   2.4e-64   8.9e-61  205.5   8.5     1   280    50   296    50   297 0.94 Cellulase (glycosyl hydrolase family 5)
CBM_3                PF00942.13    86 sp|P10475|GUN2_BACSU -            499   6.5e-28   96.5   0.3   1   1   4.9e-31   1.8e-27   95.1   0.3     1    86   356   437   356   437 0.97 Cellulose binding domain
DUF4038              PF13204.1    289 sp|P10475|GUN2_BACSU -            499   0.00043   19.7   1.5   1   2   1.4e-07    0.0005   19.4   0.2    89   211   111   229    95   258 0.68 Protein of unknown function (DUF4038)
Glyco_hydro_cc       PF11790.3    239 sp|P10475|GUN2_BACSU -            499   0.00084   18.8   0.7   2   2   3.5e-05      0.13   11.6   0.0   140   200   225   283   167   311 0.69 Glycosyl hydrolase catalytic core
MFS_2                PF13347.1    428 sp|O34368|GUTA_BACSU -            463  1.3e-117  392.8  37.7   1   1    2e-121  1.5e-117  392.6  37.7     1   428    26   447    26   447 0.99 MFS/sugar transport protein
MFS_1                PF07690.11   352 sp|O34368|GUTA_BACSU -            463   1.4e-24   86.5  52.5   1   2   6.2e-23   4.6e-19   68.3  30.7    22   351    51   394    28   395 0.74 Major Facilitator Superfamily
MFS_1                PF07690.11   352 sp|O34368|GUTA_BACSU -            463   1.4e-24   86.5  52.5   2   2   6.1e-12   4.5e-08   32.1  13.7    28   187   275   459   272   462 0.77 Major Facilitator Superfamily
DNA_topoisoIV        PF00521.15   426 sp|P05653|GYRA_BACSU -            821    2e-161  537.5   0.9   1   1  7.1e-165  2.6e-161  537.2   0.9     1   425    33   472    33   473 0.99 DNA gyrase/topoisomerase IV, subunit A
DNA_gyraseA_C        PF03989.8     48 sp|P05653|GYRA_BACSU -            821   1.1e-69  229.5   9.7   1   6   2.6e-16   9.5e-13   47.2   0.0     2    47   506   551   505   552 0.94 DNA gyrase C-terminal domain, beta-propeller
DNA_gyraseA_C        PF03989.8     48 sp|P05653|GYRA_BACSU -            821   1.1e-69  229.5   9.7   2   6   1.2e-13   4.6e-10   38.6   0.0     1    38   555   592   555   596 0.94 DNA gyrase C-terminal domain, beta-propeller
DNA_gyraseA_C        PF03989.8     48 sp|P05653|GYRA_BACSU -            821   1.1e-69  229.5   9.7   3   6   7.1e-08   0.00026   20.1   0.0     2    47   612   655   611   656 0.94 DNA gyrase C-terminal domain, beta-propeller
DNA_gyraseA_C        PF03989.8     48 sp|P05653|GYRA_BACSU -            821   1.1e-69  229.5   9.7   4   6   2.2e-17   8.3e-14   50.6   0.3     2    45   660   703   659   706 0.94 DNA gyrase C-terminal domain, beta-propeller
DNA_gyraseA_C        PF03989.8     48 sp|P05653|GYRA_BACSU -            821   1.1e-69  229.5   9.7   5   6   2.5e-14   9.2e-11   40.8   0.0     2    45   710   754   709   757 0.94 DNA gyrase C-terminal domain, beta-propeller
DNA_gyraseA_C        PF03989.8     48 sp|P05653|GYRA_BACSU -            821   1.1e-69  229.5   9.7   6   6   6.3e-12   2.3e-08   33.1   0.1     2    47   761   806   760   807 0.94 DNA gyrase C-terminal domain, beta-propeller
GrpE                 PF01025.14   166 sp|P05653|GYRA_BACSU -            821         1    8.8   8.8   1   2   0.00023      0.84    9.1   0.2    45   107   362   426   341   430 0.78 GrpE
DNA_gyraseB          PF00204.20   173 sp|P05652|GYRB_BACSU -            638   2.2e-65  219.1   0.1   1   1   1.6e-68   3.9e-65  218.2   0.1     1   172   225   394   225   395 0.99 DNA gyrase B
DNA_gyraseB_C        PF00986.16    65 sp|P05652|GYRB_BACSU -            638   7.6e-30  102.4   0.2   1   1   7.3e-33   1.8e-29  101.2   0.2     5    65   567   627   563   627 0.96 DNA gyrase B subunit, carboxyl terminus
Toprim               PF01751.17   100 sp|P05652|GYRB_BACSU -            638   3.1e-26   91.2   0.0   1   1   3.2e-29   7.9e-26   89.9   0.0     1   100   423   535   423   535 0.97 Toprim domain
HATPase_c            PF02518.21   111 sp|P05652|GYRB_BACSU -            638   4.4e-19   68.2   0.4   1   1   3.5e-22   8.7e-19   67.2   0.4     3   107    35   172    33   176 0.90 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
HATPase_c_3          PF13589.1    137 sp|P05652|GYRB_BACSU -            638   5.1e-06   26.1   0.1   1   1   5.3e-09   1.3e-05   24.8   0.1     7    47    42    82    37   164 0.81 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
Toprim_4             PF13662.1     81 sp|P05652|GYRB_BACSU -            638     0.056   13.4   0.1   2   2   0.00022      0.56   10.2   0.0     2    60   423   507   422   514 0.84 Toprim domain
3HCDH_N              PF02737.13   180 sp|P45856|HBD_BACSU  -            287   1.6e-67  226.6   3.8   1   1   2.2e-70   2.1e-67  226.2   3.8     1   179     5   183     5   184 0.99 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain
3HCDH                PF00725.17    97 sp|P45856|HBD_BACSU  -            287   1.6e-37  127.7   0.0   1   1   5.8e-40   5.4e-37  126.1   0.0     1    97   186   282   186   282 1.00 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain
NAD_binding_2        PF03446.10   163 sp|P45856|HBD_BACSU  -            287   1.7e-06   27.9   0.2   1   1   3.4e-09   3.2e-06   27.0   0.2     2    86     4    96     3   139 0.72 NAD binding domain of 6-phosphogluconate dehydrogenase
NAD_Gly3P_dh_N       PF01210.18   157 sp|P45856|HBD_BACSU  -            287   7.2e-05   22.5   0.4   1   1   1.2e-07   0.00011   21.9   0.4     2   143     6   167     5   175 0.74 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus
AlaDh_PNT_C          PF01262.16   168 sp|P45856|HBD_BACSU  -            287   0.00031   20.3   1.1   1   1   5.7e-07   0.00053   19.6   1.1    22   109     5    89     2   100 0.75 Alanine dehydrogenase/PNT, C-terminal domain
F420_oxidored        PF03807.12    96 sp|P45856|HBD_BACSU  -            287    0.0032   17.8   1.9   1   1   1.3e-05     0.012   15.9   1.9     3    73     7    94     5   100 0.79 NADP oxidoreductase coenzyme F420-dependent
TrkA_N               PF02254.13   116 sp|P45856|HBD_BACSU  -            287    0.0044   17.0   1.5   1   1   3.4e-05     0.032   14.2   0.8     1    94     6   115     6   130 0.78 TrkA-N domain
Tex_N                PF09371.5    193 sp|P45856|HBD_BACSU  -            287     0.011   15.1   0.8   1   1   1.7e-05     0.016   14.5   0.8   108   182    37   115    35   121 0.68 Tex-like protein N-terminal domain
2-Hacid_dh_C         PF02826.14   178 sp|P45856|HBD_BACSU  -            287      0.02   14.0   0.1   1   1   4.1e-05     0.038   13.1   0.1    37    73     4    40     1    56 0.82 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain
NAD_binding_10       PF13460.1    183 sp|P45856|HBD_BACSU  -            287     0.025   14.5   0.1   1   1   4.3e-05     0.039   13.9   0.1     1    66     6    69     6   113 0.71 NADH(P)-binding
XdhC_C               PF13478.1    136 sp|P45856|HBD_BACSU  -            287     0.042   14.1   0.1   1   1     9e-05     0.084   13.1   0.1     1    49     6    55     6   100 0.74 XdhC Rossmann domain
ApbA                 PF02558.11   151 sp|P45856|HBD_BACSU  -            287     0.061   12.7   0.1   1   1   0.00014      0.13   11.6   0.0     1    73     6    88     6   141 0.72 Ketopantoate reductase PanE/ApbA
Mannitol_dh          PF01232.18   151 sp|P45856|HBD_BACSU  -            287     0.094   12.6   0.5   1   1   0.00017      0.16   11.8   0.5     6   102     9    92     4   169 0.77 Mannitol dehydrogenase Rossmann domain
NAD_binding_7        PF13241.1    103 sp|P45856|HBD_BACSU  -            287      0.14   12.4   0.2   1   1   0.00023      0.21   11.8   0.2     8    71     4    93     1   108 0.61 Putative NAD(P)-binding
UvrD-helicase        PF00580.16   315 sp|O32215|HELD_BACSU -            774   1.8e-13   50.5  15.1   1   2   1.2e-07   0.00013   21.4   0.1     2    48   214   263   213   267 0.78 UvrD/REP helicase N-terminal domain
UvrD-helicase        PF00580.16   315 sp|O32215|HELD_BACSU -            774   1.8e-13   50.5  15.1   2   2   1.5e-12   1.6e-09   37.5   3.5   135   298   359   580   319   582 0.72 UvrD/REP helicase N-terminal domain
UvrD_C_2             PF13538.1    104 sp|O32215|HELD_BACSU -            774   1.5e-12   47.5   0.0   1   1   5.6e-15   5.9e-12   45.6   0.0    20   103   671   752   632   753 0.69 UvrD-like helicase C-terminal domain
AAA_19               PF13245.1     76 sp|O32215|HELD_BACSU -            774     4e-07   29.6   0.0   1   1     9e-10   9.6e-07   28.4   0.0     7    51   224   269   218   294 0.79 Part of AAA domain
UvrD_C               PF13361.1    351 sp|O32215|HELD_BACSU -            774   4.5e-07   29.6  13.7   2   3   0.00019      0.21   11.0   0.0     2    94   602   681   601   688 0.79 UvrD-like helicase C-terminal domain
UvrD_C               PF13361.1    351 sp|O32215|HELD_BACSU -            774   4.5e-07   29.6  13.7   3   3   1.3e-08   1.4e-05   24.7   0.1   282   348   698   754   678   757 0.81 UvrD-like helicase C-terminal domain
Viral_helicase1      PF01443.13   234 sp|O32215|HELD_BACSU -            774   2.5e-06   27.1   0.4   2   2   1.4e-05     0.015   14.8   0.9    54   228   531   748   510   753 0.76 Viral (Superfamily 1) RNA helicase
DUF2075              PF09848.4    352 sp|O32215|HELD_BACSU -            774   3.1e-06   26.4   0.1   1   2   0.00012      0.12   11.2   0.0     2    25   227   250   226   296 0.84 Uncharacterized conserved protein (DUF2075)
DUF2075              PF09848.4    352 sp|O32215|HELD_BACSU -            774   3.1e-06   26.4   0.1   2   2   6.7e-05     0.071   12.0   0.1    67   199   527   640   497   694 0.75 Uncharacterized conserved protein (DUF2075)
AAA_30               PF13604.1    196 sp|O32215|HELD_BACSU -            774   8.8e-05   22.1   0.3   1   3   5.3e-05     0.057   13.0   0.0     3    35   214   243   211   269 0.73 AAA domain
PhoH                 PF02562.11   205 sp|O32215|HELD_BACSU -            774   9.5e-05   21.7   0.1   1   2   7.1e-05     0.075   12.2   0.0     5    43   213   250   209   286 0.75 PhoH-like protein
DEAD                 PF00270.24   169 sp|O32215|HELD_BACSU -            774     0.015   14.7   0.5   1   1    0.0001      0.11   12.0   0.3     3    42   213   254   211   441 0.88 DEAD/DEAH box helicase
NACHT                PF05729.7    166 sp|O32215|HELD_BACSU -            774     0.048   13.3   0.0   1   1   0.00021      0.22   11.1   0.0     2    39   228   266   227   272 0.77 NACHT domain
ResIII               PF04851.10   184 sp|O32215|HELD_BACSU -            774     0.073   12.8   1.2   1   1   0.00023      0.25   11.1   0.0    10    52   207   262   195   314 0.74 Type III restriction enzyme, res subunit
GlutR_N              PF05201.10   152 sp|P16618|HEM1_BACSU -            455   1.1e-53  180.8   0.1   1   1   3.8e-56   2.7e-53  179.6   0.1     1   151     6   156     6   157 0.99 Glutamyl-tRNAGlu reductase, N-terminal domain
Shikimate_DH         PF01488.15   135 sp|P16618|HEM1_BACSU -            455   1.9e-41  141.3   0.0   1   1   7.3e-44   5.1e-41  139.9   0.0     1   134   171   305   171   306 0.97 Shikimate / quinate 5-dehydrogenase
GlutR_dimer          PF00745.15   101 sp|P16618|HEM1_BACSU -            455   1.1e-22   79.8   4.6   1   1   1.7e-25   1.2e-22   79.7   2.9     1   101   319   420   319   420 0.98 Glutamyl-tRNAGlu reductase, dimerisation domain
OCD_Mu_crystall      PF02423.10   314 sp|P16618|HEM1_BACSU -            455     2e-06   26.8   0.0   1   1   5.8e-09   4.1e-06   25.7   0.0   119   217   172   264   167   269 0.90 Ornithine cyclodeaminase/mu-crystallin family
NAD_binding_10       PF13460.1    183 sp|P16618|HEM1_BACSU -            455   3.3e-05   23.9   0.0   1   1   9.3e-08   6.5e-05   23.0   0.0     1    81   185   265   185   295 0.89 NADH(P)-binding
TrkA_N               PF02254.13   116 sp|P16618|HEM1_BACSU -            455     4e-05   23.5   0.1   1   1   1.4e-07    0.0001   22.2   0.1     1    75   185   255   185   279 0.85 TrkA-N domain
F420_oxidored        PF03807.12    96 sp|P16618|HEM1_BACSU -            455   4.7e-05   23.7   0.5   1   1   3.1e-07   0.00022   21.6   0.2     2    67   185   248   184   280 0.85 NADP oxidoreductase coenzyme F420-dependent
NAD_binding_2        PF03446.10   163 sp|P16618|HEM1_BACSU -            455   4.8e-05   23.2   0.1   1   1   1.6e-07   0.00011   22.0   0.1     3    71   184   256   182   278 0.82 NAD binding domain of 6-phosphogluconate dehydrogenase
2-Hacid_dh_C         PF02826.14   178 sp|P16618|HEM1_BACSU -            455   5.6e-05   22.3   0.1   1   1   1.6e-07   0.00011   21.3   0.1    33    98   179   249   158   269 0.81 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain
ThiF                 PF00899.16   136 sp|P16618|HEM1_BACSU -            455     9e-05   22.3   0.0   1   1     3e-07   0.00021   21.0   0.0     2    35   182   215   181   249 0.90 ThiF family
NAD_binding_7        PF13241.1    103 sp|P16618|HEM1_BACSU -            455   0.00044   20.4   0.0   1   1   2.1e-06    0.0015   18.7   0.0     2    83   177   267   176   284 0.76 Putative NAD(P)-binding
Saccharop_dh         PF03435.13   386 sp|P16618|HEM1_BACSU -            455   0.00092   18.2   0.1   1   1   2.9e-06     0.002   17.1   0.0     1    78   185   253   185   296 0.82 Saccharopine dehydrogenase
AdoHcyase_NAD        PF00670.16   162 sp|P16618|HEM1_BACSU -            455    0.0011   18.8   0.0   1   1   3.4e-06    0.0024   17.7   0.0    21   100   180   264   171   270 0.80 S-adenosyl-L-homocysteine hydrolase, NAD binding domain
ELFV_dehydrog        PF00208.16   244 sp|P16618|HEM1_BACSU -            455    0.0059   16.2   0.1   1   1   1.6e-05     0.011   15.3   0.1    11   128   162   290   154   387 0.70 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase
MutS_III             PF05192.13   204 sp|P16618|HEM1_BACSU -            455    0.0068   16.1   0.0   1   2   0.00024      0.17   11.6   0.0   123   201   104   248    16   251 0.62 MutS domain III
ApbA                 PF02558.11   151 sp|P16618|HEM1_BACSU -            455     0.016   14.6   0.1   1   1     6e-05     0.042   13.2   0.1     1    36   185   222   185   251 0.85 Ketopantoate reductase PanE/ApbA
Latarcin             PF10279.4     81 sp|P16618|HEM1_BACSU -            455     0.025   14.7   0.0   1   1    0.0011      0.77    9.9   0.0    22    57   257   444   229   453 0.83 Latarcin precursor
IlvN                 PF07991.7    165 sp|P16618|HEM1_BACSU -            455     0.027   13.8   0.0   1   1   8.6e-05     0.061   12.6   0.0     2    66   180   248   179   274 0.79 Acetohydroxy acid isomeroreductase, catalytic domain
THF_DHG_CYH_C        PF02882.14   161 sp|P16618|HEM1_BACSU -            455     0.034   13.2   0.2   1   1   0.00064      0.45    9.5   0.1    71   101   234   264   159   268 0.76 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain
Pyr_redox_3          PF13738.1    203 sp|P16618|HEM1_BACSU -            455     0.071   13.1   0.0   1   1   0.00026      0.18   11.8   0.1   160   200   173   216   107   219 0.76 Pyridine nucleotide-disulphide oxidoreductase
TfuA                 PF07812.7    120 sp|P16618|HEM1_BACSU -            455      0.11   11.9   1.2   1   1   0.00058      0.41   10.1   0.1    20    62   182   224   162   268 0.78 TfuA-like protein
ALAD                 PF00490.16   324 sp|P30950|HEM2_BACSU -            324  4.2e-152  505.6   0.2   1   1  3.2e-156  4.8e-152  505.4   0.2     3   324     5   322     3   322 0.99 Delta-aminolevulinic acid dehydratase
Porphobil_deam       PF01379.15   215 sp|P16616|HEM3_BACSU -            314   8.5e-97  322.2   0.1   1   1  2.1e-100     1e-96  321.9   0.1     1   214     4   216     4   217 0.98 Porphobilinogen deaminase, dipyromethane cofactor binding domain
Porphobil_deamC      PF03900.10    74 sp|P16616|HEM3_BACSU -            314   2.1e-24   85.3   0.1   1   1   8.1e-28     4e-24   84.5   0.1     3    73   227   294   225   295 0.93 Porphobilinogen deaminase, C-terminal domain
SBP_bac_3            PF00497.15   225 sp|P16616|HEM3_BACSU -            314     0.034   13.3   0.0   1   2   9.4e-05      0.46    9.6   0.0   101   211   114   225    50   232 0.74 Bacterial extracellular solute-binding proteins, family 3
HEM4                 PF02602.10   231 sp|P21248|HEM4_BACSU -            262     2e-50  171.1   0.0   1   1   1.6e-54   2.3e-50  170.9   0.0     2   231    23   250    22   250 0.95 Uroporphyrinogen-III synthase HemD
Ferrochelatase       PF00762.14   316 sp|P32396|HEMH_BACSU -            310   1.8e-81  273.5   0.0   1   1   2.9e-85   2.1e-81  273.3   0.0     1   315     5   307     5   308 0.95 Ferrochelatase
MutS_III             PF05192.13   204 sp|P32396|HEMH_BACSU -            310     0.012   15.4   0.0   1   1   1.8e-06     0.013   15.2   0.0    81   164    21   135    17   255 0.67 MutS domain III
Radical_SAM          PF04055.16   166 sp|Q796V8|HEMZ_BACSU -            501   1.9e-18   67.1   0.1   1   1   2.9e-22   4.2e-18   66.0   0.1     5   164   178   350   174   352 0.86 Radical SAM superfamily
polyprenyl_synt      PF00348.12   260 sp|P31114|HEPS2_BACSU -            348   6.3e-84  280.8   0.1   1   1   1.1e-87   8.2e-84  280.5   0.1     2   259    60   313    59   314 0.98 Polyprenyl synthetase
DUF3545              PF12065.3     59 sp|P31114|HEPS2_BACSU -            348     0.071   12.8   0.1   1   1   3.7e-05      0.27   10.9   0.1    29    44   174   189   173   191 0.93 Protein of unknown function (DUF3545)
GTP-bdg_N            PF13167.1     95 sp|P94478|HFLX_BACSU -            420   2.4e-29  101.3   0.4   1   1   2.9e-32   6.2e-29   99.9   0.4     5    95    25   115    22   115 0.98 GTP-binding GTPase N-terminal
MMR_HSR1             PF01926.18   116 sp|P94478|HFLX_BACSU -            420   6.5e-21   74.4   0.0   2   2   2.1e-23   4.5e-20   71.7   0.0     1   116   202   321   202   321 0.86 50S ribosome-binding GTPase
DNA_photolyase       PF00875.13   165 sp|P94478|HFLX_BACSU -            420    0.0006   19.5   0.1   2   2   1.4e-05     0.031   14.0   0.0    55   126   301   370   296   402 0.87 DNA photolyase
FeoB_N               PF02421.13   156 sp|P94478|HFLX_BACSU -            420     0.001   18.3   0.0   1   1   1.2e-06    0.0026   17.0   0.0     2    90   202   291   201   326 0.68 Ferrous iron transport protein B
LSM                  PF01423.17    67 sp|O31796|HFQ_BACSU  -             73   4.1e-11   42.2   0.1   1   1   3.9e-15   5.7e-11   41.7   0.1     3    66    11    63     5    64 0.88 LSM domain
HisG                 PF01634.13   163 sp|O34520|HIS1_BACSU -            213   1.4e-50  171.1   0.1   1   1   2.4e-54   1.7e-50  170.7   0.1     2   162    54   206    53   207 0.96 ATP phosphoribosyltransferase
DNA_pol_B_thumb      PF14791.1     64 sp|O34520|HIS1_BACSU -            213      0.13   11.9   0.0   1   1   4.3e-05      0.32   10.7   0.0    28    55    63    91    52    96 0.83 DNA polymerase beta thumb
PRA-CH               PF01502.13    75 sp|O34912|HIS2_BACSU -            209   4.6e-37  125.4   0.2   1   1   1.9e-40   6.9e-37  124.9   0.2     2    74    30   102    29   103 0.98 Phosphoribosyl-AMP cyclohydrolase
PRA-PH               PF01503.12    83 sp|O34912|HIS2_BACSU -            209   1.4e-15   57.3   0.5   1   1   5.9e-19   2.2e-15   56.6   0.5     2    82   118   203   117   204 0.96 Phosphoribosyl-ATP pyrophosphohydrolase
MazG                 PF03819.12    74 sp|O34912|HIS2_BACSU -            209   1.6e-05   24.7   1.4   1   1   4.4e-09   1.6e-05   24.7   1.4     3    65   145   202   143   207 0.89 MazG nucleotide pyrophosphohydrolase domain
DUF3773              PF12608.3     97 sp|O34912|HIS2_BACSU -            209     0.045   13.8   0.0   1   1   2.9e-05      0.11   12.5   0.0    26    63     3    41     1    47 0.92 Protein of unknown function (DUF3773)
His_biosynth         PF00977.16   229 sp|O35006|HIS4_BACSU -            245   4.8e-78  261.5   0.4   1   1   3.3e-81   5.4e-78  261.4   0.4     2   229     6   234     5   234 0.99 Histidine biosynthesis protein
DHO_dh               PF01180.16   295 sp|O35006|HIS4_BACSU -            245   1.3e-05   24.3   0.3   1   2   2.7e-06    0.0044   16.0   0.0   230   288    65   121    56   127 0.79 Dihydroorotate dehydrogenase
Dus                  PF01207.12   310 sp|O35006|HIS4_BACSU -            245    0.0004   19.3   0.0   1   2   5.6e-06    0.0092   14.8   0.0   169   225    63   118    36   131 0.87 Dihydrouridine synthase (Dus)
PcrB                 PF01884.12   231 sp|O35006|HIS4_BACSU -            245   0.00086   18.6   2.2   1   2   1.1e-05     0.018   14.3   0.1   172   226    68   122    36   126 0.78 PcrB family
IMPDH                PF00478.20   352 sp|O35006|HIS4_BACSU -            245    0.0009   18.2   0.2   1   2   0.00012       0.2   10.5   0.0   202   241    68   107    67   112 0.94 IMP dehydrogenase / GMP reductase domain
FMN_dh               PF01070.13   357 sp|O35006|HIS4_BACSU -            245     0.033   13.0   0.2   1   2   7.6e-05      0.13   11.1   0.0   272   311    71   108    63   112 0.88 FMN-dependent dehydrogenase
Ribul_P_3_epim       PF00834.14   201 sp|O35006|HIS4_BACSU -            245      0.12   11.4   0.7   2   3   0.00027      0.44    9.6   0.1   161   198    72   110    45   113 0.81 Ribulose-phosphate 3 epimerase family
EAL                  PF00563.15   236 sp|O35006|HIS4_BACSU -            245      0.16   11.4   0.0   1   1   0.00027      0.45    9.9   0.0   192   235   182   226   170   227 0.91 EAL domain
His_biosynth         PF00977.16   229 sp|O34727|HIS6_BACSU -            252   5.6e-85  284.2   0.8   1   1   3.9e-88   6.4e-85  284.0   0.8     1   228     5   235     5   236 0.98 Histidine biosynthesis protein
NMO                  PF03060.10   330 sp|O34727|HIS6_BACSU -            252   1.1e-10   41.1   0.6   1   2     2e-07   0.00034   19.8   0.1   170   221    56   105    33   112 0.87 Nitronate monooxygenase
NMO                  PF03060.10   330 sp|O34727|HIS6_BACSU -            252   1.1e-10   41.1   0.6   2   2   1.9e-07   0.00032   19.9   0.0   177   233   184   240   159   246 0.83 Nitronate monooxygenase
Dus                  PF01207.12   310 sp|O34727|HIS6_BACSU -            252   4.3e-06   25.7   0.0   1   2   2.2e-07   0.00036   19.4   0.0   172   225    63   115    32   141 0.90 Dihydrouridine synthase (Dus)
ThiG                 PF05690.9    247 sp|O34727|HIS6_BACSU -            252   6.1e-05   22.2   0.3   1   2   3.6e-05     0.059   12.4   0.1   165   207    64   106    52   123 0.86 Thiazole biosynthesis protein ThiG
TMP-TENI             PF02581.12   180 sp|O34727|HIS6_BACSU -            252   0.00012   21.2   0.5   1   2   6.2e-06      0.01   14.9   0.1   137   178    62   104    33   106 0.83 Thiamine monophosphate synthase/TENI
DHO_dh               PF01180.16   295 sp|O34727|HIS6_BACSU -            252    0.0028   16.6   0.1   1   2   0.00054      0.89    8.4   0.0   229   278    61   108    56   115 0.88 Dihydroorotate dehydrogenase
IMPDH                PF00478.20   352 sp|O34727|HIS6_BACSU -            252    0.0041   16.0   0.3   1   2   0.00019      0.32    9.8   0.1   126   175    50   101     7   105 0.68 IMP dehydrogenase / GMP reductase domain
PcrB                 PF01884.12   231 sp|O34727|HIS6_BACSU -            252     0.018   14.3   0.1   1   2     3e-05      0.05   12.8   0.0   171   213    60   105    45   115 0.70 PcrB family
G3P_antiterm         PF04309.7    175 sp|O34727|HIS6_BACSU -            252     0.018   14.0   0.5   1   2   3.6e-05      0.06   12.3   0.1   128   171    62   105    58   109 0.90 Glycerol-3-phosphate responsive antiterminator
IGPD                 PF00475.13   145 sp|O34683|HIS7_BACSU -            194   4.1e-64  214.8   1.6   1   1   3.2e-68   4.8e-64  214.5   1.6     1   144    31   174    31   175 0.99 Imidazoleglycerol-phosphate dehydratase
Aminotran_1_2        PF00155.16   363 sp|P17731|HIS8_BACSU -            360   1.3e-69  234.9   0.0   1   1   3.9e-73   1.5e-69  234.7   0.0     2   361    30   354    29   356 0.96 Aminotransferase class I and II
Aminotran_5          PF00266.14   371 sp|P17731|HIS8_BACSU -            360   1.9e-08   33.4   0.0   1   2   1.2e-11   4.3e-08   32.3   0.0    47   177    68   192    42   194 0.84 Aminotransferase class-V
Alliinase_C          PF04864.8    363 sp|P17731|HIS8_BACSU -            360   4.1e-05   22.4   0.0   1   1   1.6e-08   5.8e-05   21.9   0.0    65   212    80   240    76   290 0.79 Allinase
Cys_Met_Meta_PP      PF01053.15   386 sp|P17731|HIS8_BACSU -            360     0.019   13.2   0.0   1   1   7.5e-06     0.028   12.7   0.0    90   180   101   193    65   198 0.68 Cys/Met metabolism PLP-dependent enzyme
PHP                  PF02811.14   175 sp|O34411|HIS9_BACSU -            268   2.7e-14   53.3   0.0   1   1   4.7e-18   3.5e-14   52.9   0.0     2   170     5   223     4   241 0.85 PHP domain
PHP_C                PF13263.1     56 sp|O34411|HIS9_BACSU -            268   1.1e-06   28.0   0.0   2   2   6.6e-10   4.9e-06   25.9   0.0    11    37   238   264   235   268 0.89 PHP-associated
Histidinol_dh        PF00815.15   413 sp|O34651|HISX_BACSU -            427  2.1e-174  580.0   1.0   1   1  4.9e-178  2.4e-174  579.7   1.0     5   412    14   422    10   423 0.97 Histidinol dehydrogenase
DHC_N1               PF08385.7    579 sp|O34651|HISX_BACSU -            427      0.18   10.1   0.4   1   1   5.2e-05      0.26    9.6   0.4   256   330    23    93    10    95 0.88 Dynein heavy chain, N-terminal region 1
tRNA-synt_His        PF13393.1    311 sp|O34459|HISZ_BACSU -            391   1.5e-76  257.4   0.0   1   1   3.8e-80   1.9e-76  257.1   0.0     1   311     9   317     9   317 0.97 Histidyl-tRNA synthetase
tRNA-synt_2b         PF00587.20   173 sp|O34459|HISZ_BACSU -            391   6.6e-11   42.0   0.0   1   2   7.1e-14   3.5e-10   39.7   0.0    10   152    29   161    20   168 0.87 tRNA synthetase class II core domain (G, H, P, S and T)
tRNA-synt_2d         PF01409.15   247 sp|O34459|HISZ_BACSU -            391    0.0042   16.3   0.0   1   2   2.1e-06      0.01   15.0   0.0    20   142    22   137     8   149 0.77 tRNA synthetases class II core domain (F)
Transthyretin        PF00576.16   112 sp|O32142|HIUH_BACSU -            114   5.3e-38  129.3   0.0   1   1   1.2e-41   5.9e-38  129.1   0.0     2   112     3   113     2   113 0.98 HIUase/Transthyretin family
CarboxypepD_reg      PF13620.1     82 sp|O32142|HIUH_BACSU -            114     0.035   14.1   0.0   1   1   9.2e-06     0.046   13.7   0.0     5    59     7    67     3    90 0.78 Carboxypeptidase regulatory-like domain
DUF1703              PF08011.6    105 sp|O32142|HIUH_BACSU -            114     0.076   12.7   0.0   1   1   2.1e-05       0.1   12.3   0.0    26    62    36    72    24    80 0.78 Protein of unknown function (DUF1703)
HlyIII               PF03006.15   222 sp|P54175|HLY3_BACSU -            213     2e-51  174.5  26.5   1   1   3.4e-55   2.5e-51  174.2  26.5     1   221     2   198     2   199 0.98 Haemolysin-III related
DUF2721              PF11026.3    130 sp|P54175|HLY3_BACSU -            213     0.021   14.4   1.3   1   2   2.8e-06     0.021   14.4   1.3    62   115     8    61     6    70 0.93 Protein of unknown function (DUF2721)
HMGL-like            PF00682.14   237 sp|O34873|HMGCL_BACSU -            299     6e-46  157.0   0.0   1   1   9.5e-50     7e-46  156.7   0.0     1   236    15   262    15   263 0.98 HMGL-like
Aldolase_II          PF00596.16   184 sp|O34873|HMGCL_BACSU -            299     0.086   12.4   0.0   1   1   1.7e-05      0.13   11.9   0.0    71   145   188   259   129   272 0.70 Class II Aldolase and Adducin N-terminal domain
ABM                  PF03992.11    78 sp|O31534|HMOA_BACSU -            108   5.6e-15   55.1   0.7   1   1   9.7e-19   7.2e-15   54.7   0.7     1    77     1    77     1    78 0.93 Antibiotic biosynthesis monooxygenase
DUF1330              PF07045.6     65 sp|O31534|HMOA_BACSU -            108       0.1   12.4   0.2   1   1   2.9e-05      0.22   11.4   0.2    31    60    44    71    14    72 0.80 Protein of unknown function (DUF1330)
ABM                  PF03992.11    78 sp|P38049|HMOB_BACSU -            166     1e-15   57.4   0.0   1   1   1.1e-19   1.6e-15   56.8   0.0     2    78    66   140    65   140 0.94 Antibiotic biosynthesis monooxygenase
NAD_binding_1        PF00175.16   109 sp|P49852|HMP_BACSU  -            399   3.3e-16   59.8   0.1   1   1   4.2e-19   1.2e-15   57.9   0.0     1   108   264   371   264   372 0.81 Oxidoreductase NAD-binding domain
FAD_binding_6        PF00970.19    99 sp|P49852|HMP_BACSU  -            399     2e-14   53.4   0.0   1   1   1.2e-17   3.7e-14   52.6   0.0     2    98   157   253   156   254 0.87 Oxidoreductase FAD-binding domain
Globin               PF00042.17   110 sp|P49852|HMP_BACSU  -            399   2.8e-12   46.9   0.1   1   2   8.1e-15   2.4e-11   43.9   0.0     2   109     7   102     6   103 0.88 Globin
Protoglobin          PF11563.3    158 sp|P49852|HMP_BACSU  -            399   2.5e-06   27.2   0.1   1   1     2e-09     6e-06   26.0   0.1    14   122     2   113     1   134 0.78 Protoglobin
NAD_binding_6        PF08030.7    156 sp|P49852|HMP_BACSU  -            399   7.8e-06   25.8   0.1   1   2   4.1e-08   0.00012   21.9   0.0     3    65   261   314   259   348 0.75 Ferric reductase NAD binding domain
HPPK                 PF01288.15   127 sp|P29252|HPPK_BACSU -            167   2.9e-48  162.8   0.0   1   1   2.8e-52   4.2e-48  162.2   0.0     1   127     6   132     6   132 0.99 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK)
Hpr_kinase_C         PF07475.7    171 sp|O34483|HPRK_BACSU -            310   7.8e-77  256.3   2.1   1   1   3.8e-80   9.4e-77  256.1   1.3     2   170   130   298   129   299 0.99 HPr Serine kinase C-terminal domain
Hpr_kinase_N         PF02603.11   127 sp|O34483|HPRK_BACSU -            310   8.2e-48  161.2   0.0   1   1   6.5e-51   1.6e-47  160.3   0.0     2   127     3   128     2   128 0.99 HPr Serine kinase N terminus
DRTGG                PF07085.7    105 sp|O34483|HPRK_BACSU -            310   0.00038   20.0   0.0   1   1   4.3e-07    0.0011   18.5   0.0    61   104    82   125    70   126 0.89 DRTGG domain
AAA_18               PF13238.1    129 sp|O34483|HPRK_BACSU -            310    0.0016   18.7   0.0   1   1   1.3e-06    0.0033   17.7   0.0     1    31   149   179   149   199 0.83 AAA domain
AAA_17               PF13207.1    121 sp|O34483|HPRK_BACSU -            310    0.0035   18.1   0.1   1   1     3e-06    0.0074   17.1   0.1     2    38   149   185   149   262 0.84 AAA domain
AAA_29               PF13555.1     62 sp|O34483|HPRK_BACSU -            310     0.038   13.5   0.1   1   1   3.3e-05     0.082   12.4   0.1    17    37   142   160   135   164 0.76 P-loop containing region of AAA domain
Pribosyltran         PF00156.22   125 sp|P37472|HPRT_BACSU -            180   1.5e-16   60.2   0.3   1   1   2.4e-20   1.8e-16   59.9   0.3     2   124     8   128     7   129 0.91 Phosphoribosyl transferase domain
cwf21                PF08312.7     46 sp|P37472|HPRT_BACSU -            180      0.11   12.3   1.1   1   1   2.9e-05      0.22   11.4   1.1    25    46    10    32     5    32 0.89 cwf21 domain
OMPdecase            PF00215.19   226 sp|P42405|HPS_BACSU  -            210   2.2e-33  115.5   7.2   1   1   1.8e-36   2.6e-33  115.2   7.2     2   225     2   202     1   203 0.93 Orotidine 5'-phosphate decarboxylase / HUMPS family
HMGL-like            PF00682.14   237 sp|P42405|HPS_BACSU  -            210   7.6e-07   29.0   0.6   1   2   1.1e-07   0.00016   21.4   0.3     9   115     8   112     3   115 0.85 HMGL-like
PEP_mutase           PF13714.1    238 sp|P42405|HPS_BACSU  -            210   0.00035   19.8   0.1   1   1   5.7e-07   0.00085   18.6   0.1   164   220    73   135    70   146 0.78 Phosphoenolpyruvate phosphomutase
RE_AccI              PF09545.5    366 sp|P42405|HPS_BACSU  -            210     0.001   17.6   0.0   1   1     1e-06    0.0015   17.1   0.0   159   237    95   173    74   190 0.86 AccI restriction endonuclease
QRPTase_C            PF01729.14   169 sp|P42405|HPS_BACSU  -            210    0.0029   17.1   4.1   1   2   0.00043      0.63    9.5   1.4    68   154    42   133    27   140 0.70 Quinolinate phosphoribosyl transferase, C-terminal domain
Ribul_P_3_epim       PF00834.14   201 sp|P42405|HPS_BACSU  -            210     0.013   14.6   2.3   1   1   2.8e-05     0.042   12.9   2.0    73   199    70   192    23   194 0.75 Ribulose-phosphate 3 epimerase family
DUF39                PF01837.11   340 sp|P42405|HPS_BACSU  -            210     0.014   14.0   0.3   1   1   1.2e-05     0.017   13.7   0.3   201   302    34   136    27   180 0.83 Domain of unknown function DUF39
RuvC                 PF02075.12   149 sp|P42405|HPS_BACSU  -            210     0.021   14.6   2.3   1   2   4.7e-05     0.069   12.9   1.7    28   145     7   128     3   134 0.83 Crossover junction endodeoxyribonuclease RuvC
Pterin_bind          PF00809.17   210 sp|P42405|HPS_BACSU  -            210     0.065   12.5   3.0   1   1   7.3e-05      0.11   11.8   1.9    84   157    95   164    11   173 0.88 Pterin binding enzyme
G-gamma              PF00631.17    68 sp|P42405|HPS_BACSU  -            210      0.13   12.0   0.0   1   1   0.00018      0.26   11.0   0.0    21    47    69    95    60   104 0.89 GGL domain
HrcA                 PF01628.16   224 sp|P25499|HRCA_BACSU -            343   9.6e-74  247.7   1.9   1   1   8.6e-77   1.4e-73  247.1   1.9     1   224   103   323   103   323 0.97 HrcA protein C terminal domain
HrcA_DNA-bdg         PF03444.10    79 sp|P25499|HRCA_BACSU -            343   0.00029   20.2   0.0   1   1   6.3e-07     0.001   18.4   0.0     1    71     1    72     1    76 0.85 Winged helix-turn-helix transcription repressor, HrcA DNA-binding
HTH_11               PF08279.7     55 sp|P25499|HRCA_BACSU -            343     0.018   14.6   0.0   1   1   3.4e-05     0.056   13.0   0.0    10    50    18    59     5    72 0.71 HTH domain
HTH_12               PF08461.5     66 sp|P25499|HRCA_BACSU -            343     0.021   14.5   0.0   1   1   3.1e-05     0.051   13.3   0.0     3    63    13    71     9    73 0.80 Ribonuclease R winged-helix domain
HTH_DeoR             PF08220.7     57 sp|P25499|HRCA_BACSU -            343     0.026   14.0   0.0   1   1   5.4e-05     0.089   12.3   0.0    26    48    37    59    33    66 0.92 DeoR-like helix-turn-helix domain
LexA_DNA_bind        PF01726.11    65 sp|P25499|HRCA_BACSU -            343      0.04   13.4   0.1   1   1   9.4e-05      0.16   11.5   0.0     4    61     2    60     1    63 0.81 LexA DNA binding domain
Ribosomal_S19e       PF01090.14   140 sp|P25499|HRCA_BACSU -            343     0.053   12.9   0.0   1   1   7.1e-05      0.12   11.8   0.0    87   126    32    72    21    86 0.82 Ribosomal protein S19e
Med2                 PF11214.3    105 sp|P25499|HRCA_BACSU -            343     0.095   12.7   1.1   2   2   0.00028      0.46   10.5   0.1    47    75   202   229   169   245 0.85 Mediator complex subunit 2
HSP33                PF01430.14   280 sp|P37565|HSLO_BACSU -            291   6.2e-97  324.0   0.0   1   1  4.8e-101   7.1e-97  323.8   0.0     1   280     1   279     1   279 0.98 Hsp33 protein
HSP90                PF00183.13   531 sp|P46208|HTPG_BACSU -            626  2.1e-109  366.3  26.2   1   2   4.1e-10   1.2e-06   27.2   1.0     1    47   184   230   184   233 0.92 Hsp90 protein
HSP90                PF00183.13   531 sp|P46208|HTPG_BACSU -            626  2.1e-109  366.3  26.2   2   2  8.9e-107  2.6e-103  346.2  20.5    81   490   224   624   223   626 0.93 Hsp90 protein
HATPase_c_3          PF13589.1    137 sp|P46208|HTPG_BACSU -            626   1.7e-14   53.6   0.8   1   1   1.4e-17   4.1e-14   52.3   0.8     4   106    26   150    22   183 0.80 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
HATPase_c            PF02518.21   111 sp|P46208|HTPG_BACSU -            626   7.3e-07   28.8   0.0   1   1   4.8e-10   1.4e-06   27.9   0.0     4    98    27   142    24   176 0.72 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
Peptidase_M48        PF01435.13   226 sp|O31657|HTPX_BACSU -            298   2.6e-38  131.8   0.8   2   2     2e-41   4.8e-38  130.9   0.6    26   225    77   293    45   294 0.80 Peptidase family M48
Peptidase_M56        PF05569.6    299 sp|O31657|HTPX_BACSU -            298   2.6e-05   23.3   0.0   1   1   2.3e-08   5.8e-05   22.2   0.0   118   220    70   173    61   197 0.82 BlaR1 peptidase M56
Peptidase_MA_2       PF13485.1    128 sp|O31657|HTPX_BACSU -            298     0.021   14.8   0.0   1   1   1.4e-05     0.035   14.1   0.0    18    44   142   168   119   196 0.72 Peptidase MA superfamily
SprT-like            PF10263.4    157 sp|O31657|HTPX_BACSU -            298      0.04   13.5   0.0   1   1   2.4e-05      0.06   12.9   0.0    41    72   121   161    66   165 0.74 SprT-like family
Peptidase_M1         PF01433.15   390 sp|O31657|HTPX_BACSU -            298      0.12   11.3   0.0   1   1   7.7e-05      0.19   10.7   0.0   290   315   144   169   130   172 0.86 Peptidase family M1
Cation_ATPase_C      PF00689.16   182 sp|O31657|HTPX_BACSU -            298       1.5    8.3   7.6   2   2   4.9e-05      0.12   11.8   0.6    43   106   158   215   142   230 0.83 Cation transporting ATPase, C-terminus
Trypsin_2            PF13365.1    120 sp|O34358|HTRA_BACSU -            449     6e-21   74.6   2.4   1   1   4.1e-24     6e-21   74.6   2.4     1   120   160   304   160   304 0.90 Trypsin-like peptidase domain
PDZ_2                PF13180.1     82 sp|O34358|HTRA_BACSU -            449   4.4e-20   71.3   0.2   2   2   2.9e-23   4.4e-20   71.3   0.2     1    82   342   441   342   441 0.97 PDZ domain
Trypsin              PF00089.21   220 sp|O34358|HTRA_BACSU -            449   2.6e-17   63.1   0.6   1   1   1.7e-20   2.6e-17   63.1   0.6    34   218   171   328   151   330 0.82 Trypsin
PDZ                  PF00595.19    81 sp|O34358|HTRA_BACSU -            449   1.1e-06   28.6   2.5   2   2     2e-09     3e-06   27.3   0.1    16    72   367   419   351   429 0.76 PDZ domain (Also known as DHR or GLGF)
GRASP55_65           PF04495.9    138 sp|O34358|HTRA_BACSU -            449    0.0063   16.5   0.0   1   1   1.3e-05      0.02   14.8   0.0    43    89   372   417   361   446 0.75 GRASP55/65 PDZ-like domain
Peptidase_S7         PF00949.16   132 sp|O34358|HTRA_BACSU -            449    0.0072   15.7   0.4   1   1   1.9e-05     0.028   13.8   0.4    91   115   282   306   248   320 0.83 Peptidase S7, Flavivirus NS3 serine protease
Peptidase_S46        PF10459.4    698 sp|O34358|HTRA_BACSU -            449     0.018   13.5   0.8   1   1   1.2e-05     0.018   13.5   0.8   616   650   270   305   259   309 0.85 Peptidase S46
Peptidase_C4         PF00863.14   235 sp|O34358|HTRA_BACSU -            449      0.17   10.8   1.9   2   2    0.0003      0.45    9.4   0.2   126   175   264   311   151   327 0.69 Peptidase family C4
Trypsin_2            PF13365.1    120 sp|Q9R9I1|HTRB_BACSU -            458   2.3e-22   79.1   1.8   1   1   2.5e-25   5.4e-22   78.0   1.8     1   120   168   312   168   312 0.94 Trypsin-like peptidase domain
PDZ_2                PF13180.1     82 sp|Q9R9I1|HTRB_BACSU -            458   7.2e-19   67.4   0.8   1   1   3.4e-22   7.2e-19   67.4   0.8     1    82   350   449   350   449 0.95 PDZ domain
Trypsin              PF00089.21   220 sp|Q9R9I1|HTRB_BACSU -            458     2e-16   60.2   2.1   1   2   9.6e-20     2e-16   60.2   2.1    34   218   179   336   143   338 0.80 Trypsin
PDZ                  PF00595.19    81 sp|Q9R9I1|HTRB_BACSU -            458   1.6e-08   34.6   3.2   2   2   1.6e-11   3.3e-08   33.5   0.1    24    66   379   421   355   437 0.83 PDZ domain (Also known as DHR or GLGF)
Peptidase_S46        PF10459.4    698 sp|Q9R9I1|HTRB_BACSU -            458    0.0024   16.3   0.7   1   1   2.3e-06    0.0048   15.3   0.7   615   650   277   313   263   328 0.83 Peptidase S46
Baculo_PP31          PF05311.6    272 sp|Q9R9I1|HTRB_BACSU -            458     0.042   13.1   0.3   2   2    0.0002      0.42    9.8   0.0   107   157   375   425   370   434 0.94 Baculovirus 33KDa late protein (PP31)
Tricorn_PDZ          PF14685.1     88 sp|Q9R9I1|HTRB_BACSU -            458     0.045   13.5   0.3   1   1   7.3e-05      0.15   11.8   0.1    28    81   388   441   380   447 0.84 Tricorn protease PDZ domain
Arginase             PF00491.16   278 sp|P42068|HUTG_BACSU -            319   2.7e-65  220.4   1.1   1   1   2.1e-69   3.1e-65  220.2   1.1     4   275    38   309    35   312 0.92 Arginase family
Lyase_aromatic       PF00221.14   473 sp|P10944|HUTH_BACSU -            508  1.8e-199  663.0   1.9   1   1  1.4e-203  2.1e-199  662.8   1.9     1   472     2   473     2   474 0.99 Aromatic amino acid lyase
Amidohydro_4         PF13147.1    304 sp|P42084|HUTI_BACSU -            421   4.4e-24   85.9   0.3   1   1   1.1e-26     4e-23   82.8   0.3     1   304    66   383    66   383 0.83 Amidohydrolase
Amidohydro_3         PF07969.6    404 sp|P42084|HUTI_BACSU -            421   4.7e-15   55.7   3.0   1   2   2.5e-06    0.0094   15.2   0.1     1    27    71    96    71   111 0.79 Amidohydrolase family
Amidohydro_3         PF07969.6    404 sp|P42084|HUTI_BACSU -            421   4.7e-15   55.7   3.0   2   2     5e-14   1.9e-10   40.5   0.7   123   404   122   384   112   384 0.80 Amidohydrolase family
Amidohydro_1         PF01979.15   333 sp|P42084|HUTI_BACSU -            421   1.4e-14   54.4   0.6   1   1   1.2e-17   4.5e-14   52.8   0.6     2   332    72   385    71   386 0.77 Amidohydrolase family
Amidohydro_5         PF13594.1     68 sp|P42084|HUTI_BACSU -            421   5.8e-13   48.4   0.1   1   1     5e-16   1.9e-12   46.8   0.1     1    64    40   111    40   146 0.74 Amidohydrolase
AA_permease          PF00324.16   478 sp|P42087|HUTM_BACSU -            475  2.5e-133  444.9  47.3   1   1  3.9e-137  2.9e-133  444.7  47.3     1   476    19   463    19   465 0.97 Amino acid permease
AA_permease_2        PF13520.1    426 sp|P42087|HUTM_BACSU -            475   2.3e-39  135.1  48.8   1   1   4.2e-43   3.1e-39  134.7  48.8     5   406    19   431    16   457 0.78 Amino acid permease
HutP                 PF09021.6    130 sp|P10943|HUTP_BACSU -            148   8.3e-42  142.4   0.1   1   1   1.3e-45   9.4e-42  142.3   0.1     1   130     8   146     8   146 0.98 HutP
KR                   PF08659.5    181 sp|P10943|HUTP_BACSU -            148    0.0076   15.9   0.0   1   1   1.2e-06    0.0092   15.6   0.0    38   126    20   100     5   109 0.80 KR domain
Urocanase            PF01175.13   546 sp|P25503|HUTU_BACSU -            552  9.3e-279  925.0   0.0   1   1  7.1e-283  1.1e-278  924.8   0.0     2   545     8   551     7   552 1.00 Urocanase
Alpha-L-AF_C         PF06964.7    177 sp|P94531|IABF1_BACSU -            500   1.9e-41  141.7   0.0   1   1   3.7e-45   2.8e-41  141.2   0.0     1   177   291   490   291   490 0.95 Alpha-L-arabinofuranosidase C-terminus
GH-E                 PF14410.1     70 sp|P94531|IABF1_BACSU -            500      0.17   12.0   1.8   1   2   8.9e-05      0.66   10.1   0.1    12    36   171   195   165   202 0.82 HNH/ENDO VII superfamily nuclease with conserved GHE residues
Alpha-L-AF_C         PF06964.7    177 sp|P94552|IABF2_BACSU -            495   2.3e-45  154.5   0.1   1   1     2e-49     3e-45  154.1   0.1     1   177   294   485   294   485 0.97 Alpha-L-arabinofuranosidase C-terminus
Iso_dh               PF00180.15   348 sp|P39126|IDH_BACSU  -            423  1.6e-126  421.9   0.0   1   1  1.5e-130  2.2e-126  421.4   0.0     2   347    22   417    21   418 0.99 Isocitrate/isopropylmalate dehydrogenase
FMN_dh               PF01070.13   357 sp|P50740|IDI2_BACSU -            349   1.8e-32  112.5   0.6   1   2   5.4e-09   1.3e-05   24.1   0.0    26   150    21   154    13   166 0.74 FMN-dependent dehydrogenase
FMN_dh               PF01070.13   357 sp|P50740|IDI2_BACSU -            349   1.8e-32  112.5   0.6   2   2   4.4e-28   1.1e-24   87.0   0.2   214   353   167   324   157   328 0.96 FMN-dependent dehydrogenase
IMPDH                PF00478.20   352 sp|P50740|IDI2_BACSU -            349   0.00027   19.9   6.8   1   2   4.2e-07     0.001   18.0   3.9   211   252   251   293   154   300 0.76 IMP dehydrogenase / GMP reductase domain
Glu_synthase         PF01645.12   368 sp|P50740|IDI2_BACSU -            349    0.0023   16.9   0.8   2   2     4e-06    0.0098   14.8   0.2   205   307   180   284   160   289 0.60 Conserved region in glutamate synthase
DeoC                 PF01791.4    236 sp|P50740|IDI2_BACSU -            349    0.0024   17.1   1.6   1   2   7.2e-06     0.018   14.3   1.6    78   228   128   280   109   282 0.79 DeoC/LacD family aldolase
NMO                  PF03060.10   330 sp|P50740|IDI2_BACSU -            349     0.026   13.6   0.9   2   2   1.8e-05     0.044   12.9   0.3   193   224   254   285   232   293 0.88 Nitronate monooxygenase
PEP_mutase           PF13714.1    238 sp|P50740|IDI2_BACSU -            349     0.056   12.6   0.1   1   2   0.00034      0.84    8.8   0.0    53   105   162   209   152   231 0.82 Phosphoenolpyruvate phosphomutase
eIF-1a               PF01176.14    65 sp|P20458|IF1_BACSU  -             72   7.7e-29   98.9   0.0   1   1   1.7e-32   8.5e-29   98.7   0.0     2    65     6    70     5    70 0.98 Translation initiation factor 1A / IF-1
S1                   PF00575.18    74 sp|P20458|IF1_BACSU  -             72     0.026   14.5   0.0   1   1   1.3e-05     0.063   13.3   0.0     8    69     9    67     3    72 0.90 S1 RNA binding domain
TOBE_2               PF08402.5     75 sp|P20458|IF1_BACSU  -             72     0.038   13.9   0.0   1   1   1.1e-05     0.052   13.5   0.0    34    72    22    62     5    63 0.92 TOBE domain
GTP_EFTU             PF00009.22   188 sp|P17889|IF2_BACSU  -            716   6.9e-43  146.2   5.5   1   1   1.1e-45   9.4e-43  145.8   2.4     5   184   221   378   218   381 0.95 Elongation factor Tu GTP binding domain
IF-2                 PF11987.3    109 sp|P17889|IF2_BACSU  -            716   1.1e-40  137.8   5.8   1   1   1.3e-43   1.1e-40  137.8   5.8     2   108   501   607   500   608 0.98 Translation-initiation factor 2
IF2_N                PF04760.10    54 sp|P17889|IF2_BACSU  -            716   6.3e-29   99.3   9.7   1   2   3.9e-15   3.4e-12   45.8   3.5     1    52     1    51     1    53 0.96 Translation initiation factor IF-2, N-terminal region
IF2_N                PF04760.10    54 sp|P17889|IF2_BACSU  -            716   6.3e-29   99.3   9.7   2   2   1.8e-18   1.5e-15   56.5   0.4     2    54   141   191   140   191 0.96 Translation initiation factor IF-2, N-terminal region
GTP_EFTU_D2          PF03144.20    74 sp|P17889|IF2_BACSU  -            716     5e-15   55.3   7.5   1   2   3.3e-11   2.8e-08   33.7   0.3     1    72   407   468   407   470 0.93 Elongation factor Tu domain 2
GTP_EFTU_D2          PF03144.20    74 sp|P17889|IF2_BACSU  -            716     5e-15   55.3   7.5   2   2   5.4e-08   4.7e-05   23.4   1.8     1    73   638   705   638   706 0.96 Elongation factor Tu domain 2
MMR_HSR1             PF01926.18   116 sp|P17889|IF2_BACSU  -            716   1.3e-08   34.7   0.3   1   1     5e-11   4.4e-08   33.0   0.3     2   116   222   327   221   327 0.78 50S ribosome-binding GTPase
Miro                 PF08477.8    119 sp|P17889|IF2_BACSU  -            716     1e-06   29.2   0.1   1   1   1.2e-09     1e-06   29.2   0.1     2   119   222   329   221   329 0.91 Miro-like protein
Arf                  PF00025.16   175 sp|P17889|IF2_BACSU  -            716   1.3e-06   27.8   0.3   1   2   1.3e-08   1.1e-05   24.7   0.0    19   171   224   376   216   379 0.79 ADP-ribosylation factor family
Ras                  PF00071.17   162 sp|P17889|IF2_BACSU  -            716   4.3e-05   22.9   0.0   1   1   1.2e-07   0.00011   21.6   0.0     3   157   223   377   221   381 0.81 Ras family
PduV-EutP            PF10662.4    143 sp|P17889|IF2_BACSU  -            716   5.5e-05   22.6   2.1   1   1   9.9e-08   8.6e-05   22.0   0.2     4   141   222   376   220   377 0.64 Ethanolamine utilisation - propanediol utilisation
SRPRB                PF09439.5    181 sp|P17889|IF2_BACSU  -            716   6.1e-05   22.3   0.3   1   1     7e-08   6.1e-05   22.3   0.3     4   136   220   342   218   348 0.80 Signal recognition particle receptor beta subunit
FeoB_N               PF02421.13   156 sp|P17889|IF2_BACSU  -            716   0.00012   21.3   0.3   1   1   6.8e-07   0.00059   19.1   0.3     3   154   222   374   220   376 0.73 Ferrous iron transport protein B
GTP_EFTU_D4          PF14578.1     81 sp|P17889|IF2_BACSU  -            716   0.00027   20.4   3.7   3   3   3.1e-07   0.00027   20.4   3.7     3    80   622   706   620   707 0.93 Elongation factor Tu domain 4
ATP_bind_1           PF03029.12   238 sp|P17889|IF2_BACSU  -            716     0.021   14.3   0.0   1   1   8.8e-05     0.077   12.5   0.0    85   181   260   343   204   388 0.76 Conserved hypothetical ATP binding protein
IF3_C                PF00707.17    88 sp|P55872|IF3_BACSU  -            173   6.5e-37  125.1   0.3   1   1   2.7e-40     1e-36  124.5   0.3     2    88    84   170    83   170 0.98 Translation initiation factor IF-3, C-terminal domain
IF3_N                PF05198.11    76 sp|P55872|IF3_BACSU  -            173   9.6e-34  115.1   0.4   1   2   9.1e-37   3.4e-33  113.4   0.1     2    76     4    78     3    78 0.97 Translation initiation factor IF-3, N-terminal domain
mIF3                 PF14877.1    181 sp|P55872|IF3_BACSU  -            173     0.012   15.0   2.0   1   1   4.7e-06     0.017   14.4   2.0   110   170    68   127    59   136 0.79 Mitochondrial translation initiation factor
N_Asn_amidohyd       PF14736.1    274 sp|P55872|IF3_BACSU  -            173     0.078   11.8   0.0   1   1   2.8e-05      0.11   11.4   0.0   199   252    65   118    58   134 0.82 Protein N-terminal asparagine amidohydrolase
PALP                 PF00291.20   306 sp|P37946|ILVA_BACSU -            422   7.9e-77  258.4   0.1   1   1   1.3e-80   9.5e-77  258.2   0.1     4   306    26   316    23   316 0.94 Pyridoxal-phosphate dependent enzyme
Thr_dehydrat_C       PF00585.13    91 sp|P37946|ILVA_BACSU -            422   3.5e-30  103.4   0.1   1   1   7.8e-34   5.8e-30  102.7   0.1     1    91   329   421   329   421 0.98 C-terminal regulatory domain of Threonine dehydratase
TPP_enzyme_N         PF02776.13   172 sp|P37251|ILVB_BACSU -            574   1.6e-57  193.7   0.1   1   2   2.2e-60   5.3e-57  192.0   0.0     1   165    18   180    18   184 0.98 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain
TPP_enzyme_C         PF02775.16   153 sp|P37251|ILVB_BACSU -            574   5.7e-55  185.0   0.0   2   2   3.3e-56   8.2e-53  178.0   0.0     1   153   400   548   400   548 0.98 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain
TPP_enzyme_M         PF00205.17   137 sp|P37251|ILVB_BACSU -            574   3.2e-45  153.2   0.4   1   1     4e-48   9.9e-45  151.6   0.1     1   137   207   342   207   342 0.98 Thiamine pyrophosphate enzyme, central domain
DXP_synthase_N       PF13292.1    270 sp|P37251|ILVB_BACSU -            574     0.031   13.2   0.0   1   1   2.4e-05     0.058   12.3   0.0   123   170   435   481   418   508 0.84 1-deoxy-D-xylulose-5-phosphate synthase
Abhydrolase_5        PF12695.2    145 sp|P37251|ILVB_BACSU -            574     0.072   12.8   0.0   1   1   7.6e-05      0.19   11.4   0.0     7   115   347   482   342   513 0.74 Alpha/beta hydrolase family
CO_dh                PF02552.11   168 sp|P37251|ILVB_BACSU -            574      0.12   11.8   0.0   1   1   0.00016       0.4   10.2   0.0    26    71   208   253   200   316 0.77 CO dehydrogenase beta subunit/acetyl-CoA synthase epsilon subunit
IlvN                 PF07991.7    165 sp|P37253|ILVC_BACSU -            342   2.1e-75  251.6   3.2   1   1   2.6e-78   3.2e-75  251.0   2.9     2   165    15   177    14   177 0.99 Acetohydroxy acid isomeroreductase, catalytic domain
IlvC                 PF01450.14   145 sp|P37253|ILVC_BACSU -            342   4.1e-61  205.1   0.1   1   1   5.2e-64   6.4e-61  204.5   0.1     1   144   183   327   183   328 0.99 Acetohydroxy acid isomeroreductase, catalytic domain
2-Hacid_dh_C         PF02826.14   178 sp|P37253|ILVC_BACSU -            342   1.2e-08   34.3   0.2   1   1   1.6e-11     2e-08   33.5   0.2    28   104     9    85     3   103 0.90 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain
F420_oxidored        PF03807.12    96 sp|P37253|ILVC_BACSU -            342   3.2e-08   33.9   2.0   1   1   3.2e-11   3.9e-08   33.6   0.7     1    91    19   104    19   106 0.89 NADP oxidoreductase coenzyme F420-dependent
NAD_binding_2        PF03446.10   163 sp|P37253|ILVC_BACSU -            342   4.3e-08   33.1   1.6   1   1   5.8e-11   7.2e-08   32.4   0.2     2    91    18   104    17   115 0.87 NAD binding domain of 6-phosphogluconate dehydrogenase
AdoHcyase_NAD        PF00670.16   162 sp|P37253|ILVC_BACSU -            342   3.1e-07   30.3   0.5   1   1   5.2e-10   6.4e-07   29.3   0.3    19    83    13    77     9    95 0.94 S-adenosyl-L-homocysteine hydrolase, NAD binding domain
CoA_binding          PF02629.14    96 sp|P37253|ILVC_BACSU -            342   0.00067   20.1   1.5   1   1   1.5e-06    0.0018   18.7   0.8     4    83    18    93    16    99 0.82 CoA binding domain
ApbA                 PF02558.11   151 sp|P37253|ILVC_BACSU -            342    0.0007   19.0   0.3   1   1   1.2e-06    0.0014   18.0   0.3     1    47    20    67    20   130 0.86 Ketopantoate reductase PanE/ApbA
NAD_Gly3P_dh_N       PF01210.18   157 sp|P37253|ILVC_BACSU -            342     0.046   13.4   1.0   1   1   0.00023      0.28   10.8   0.7     2    50    20    68    19   108 0.84 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus
Oxidored_nitro       PF00148.14   398 sp|P37253|ILVC_BACSU -            342     0.066   11.8   0.7   1   1   8.6e-05      0.11   11.1   0.7   267   310    13    56     9   281 0.88 Nitrogenase component 1 type Oxidoreductase
GFO_IDH_MocA         PF01408.17   120 sp|P37253|ILVC_BACSU -            342     0.069   13.6   0.2   1   1   0.00011      0.14   12.7   0.2     2    80    19    90    18   104 0.79 Oxidoreductase family, NAD-binding Rossmann fold
DUF900               PF05990.7    234 sp|P37253|ILVC_BACSU -            342     0.076   12.3   0.0   1   1   0.00012      0.15   11.3   0.0     4    34    84   115    81   120 0.75 Alpha/beta hydrolase of unknown function (DUF900)
ILVD_EDD             PF00920.16   521 sp|P51785|ILVD_BACSU -            558  6.4e-220  730.9   0.3   1   1  4.9e-224  7.2e-220  730.8   0.3     1   520    34   553    34   554 0.99 Dehydratase family
Aminotran_4          PF01063.14   231 sp|O31461|ILVE1_BACSU -            356   1.8e-31  109.4   0.0   1   1   1.5e-35   2.2e-31  109.1   0.0     1   227    86   334    86   338 0.84 Aminotransferase class IV
Aminotran_4          PF01063.14   231 sp|P39576|ILVE2_BACSU -            363   3.1e-29  102.0   0.0   1   1   2.7e-33     4e-29  101.7   0.0     1   228    87   335    87   338 0.89 Aminotransferase class IV
ALS_ss_C             PF10369.4     75 sp|P37252|ILVH_BACSU -            172   5.4e-30  102.9   0.3   2   2   1.8e-33   5.4e-30  102.9   0.3     1    75    84   158    84   158 0.99 Small subunit of acetolactate synthase
ACT_5                PF13710.1     63 sp|P37252|ILVH_BACSU -            172     6e-18   64.4   1.1   1   2   5.9e-21   1.8e-17   62.9   0.2     1    63    11    74    11    74 0.93 ACT domain
ACT                  PF01842.20    66 sp|P37252|ILVH_BACSU -            172   5.1e-15   54.5   0.7   1   2   4.5e-18   1.3e-14   53.2   0.2     2    65     4    69     3    70 0.96 ACT domain
ACT_4                PF13291.1     80 sp|P37252|ILVH_BACSU -            172   1.3e-08   35.0   1.9   1   1   8.8e-12   2.6e-08   34.0   1.9     9    79     5    75     3    75 0.96 ACT domain
ACT_6                PF13740.1     76 sp|P37252|ILVH_BACSU -            172     0.003   17.2   2.9   1   3   0.00012      0.36   10.5   0.3     4    65     4    68     4    77 0.76 ACT domain
TPP_enzyme_N         PF02776.13   172 sp|Q04789|ILVX_BACSU -            570   1.2e-56  190.8   5.7   1   3   9.5e-57   4.7e-53  179.1   1.4     2   169    15   180    14   183 0.96 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain
TPP_enzyme_N         PF02776.13   172 sp|Q04789|ILVX_BACSU -            570   1.2e-56  190.8   5.7   3   3   2.7e-05      0.13   11.7   0.0    67   163   444   546   426   550 0.78 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain
TPP_enzyme_C         PF02775.16   153 sp|Q04789|ILVX_BACSU -            570   5.2e-45  152.7   0.1   2   2   4.1e-48     2e-44  150.8   0.0     1   153   396   542   396   542 0.97 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain
TPP_enzyme_M         PF00205.17   137 sp|Q04789|ILVX_BACSU -            570   5.5e-23   81.2   0.0   1   1   2.3e-26   1.1e-22   80.2   0.0     1   135   200   333   200   335 0.89 Thiamine pyrophosphate enzyme, central domain
IMPDH                PF00478.20   352 sp|P21879|IMDH_BACSU -            488  9.6e-157  521.3   4.8   1   1  8.6e-160  1.3e-156  520.9   4.8     2   352    10   474     9   474 0.99 IMP dehydrogenase / GMP reductase domain
CBS                  PF00571.23    57 sp|P21879|IMDH_BACSU -            488   2.8e-23   81.4   0.5   1   2   8.4e-12   1.2e-08   34.5   0.0     4    52    95   144    93   148 0.90 CBS domain
CBS                  PF00571.23    57 sp|P21879|IMDH_BACSU -            488   2.8e-23   81.4   0.5   2   2   6.1e-15     9e-12   44.5   0.1     1    54   153   207   153   209 0.95 CBS domain
NMO                  PF03060.10   330 sp|P21879|IMDH_BACSU -            488   4.7e-09   35.8  16.4   1   1   2.7e-09     4e-06   26.2  16.4     4   230    36   375    33   383 0.75 Nitronate monooxygenase
FMN_dh               PF01070.13   357 sp|P21879|IMDH_BACSU -            488   1.7e-05   23.8   7.1   1   2   2.9e-08   4.4e-05   22.5   5.9   214   310   261   365   195   373 0.79 FMN-dependent dehydrogenase
DeoC                 PF01791.4    236 sp|P21879|IMDH_BACSU -            488   0.00029   20.2   1.5   1   1   1.9e-07   0.00029   20.2   1.5   147   222   282   358   236   372 0.78 DeoC/LacD family aldolase
B12-binding          PF02310.14   121 sp|P21879|IMDH_BACSU -            488     0.011   15.6   5.0   1   2     8e-06     0.012   15.4   0.9    39   113   232   303   220   309 0.84 B12 binding domain
NanE                 PF04131.9    192 sp|P21879|IMDH_BACSU -            488     0.022   13.7   6.0   1   1   1.5e-05     0.022   13.7   4.0    52   176   232   367   194   373 0.71 Putative N-acetylmannosamine-6-phosphate epimerase
DUF1273              PF06908.6    177 sp|P21879|IMDH_BACSU -            488     0.049   13.2   0.0   1   1   7.2e-05      0.11   12.1   0.0    34    75   236   277   229   281 0.93 Protein of unknown function (DUF1273)
PcrB                 PF01884.12   231 sp|P21879|IMDH_BACSU -            488      0.28   10.4   8.1   2   3   0.00038      0.56    9.4   0.7   155   211   246   301   232   303 0.87 PcrB family
Glu_synthase         PF01645.12   368 sp|P21879|IMDH_BACSU -            488       2.3    7.0  10.8   2   2   0.00028      0.42    9.4   5.7   217   304   285   365   256   368 0.73 Conserved region in glutamate synthase
Phage_integrase      PF00589.17   173 sp|P96629|INT_BACSU  -            368   8.6e-23   80.8   0.1   2   2   9.2e-26   2.7e-22   79.2   0.0     4   171   170   354   167   356 0.90 Phage integrase family
Phage_int_SAM_3      PF14659.1     58 sp|P96629|INT_BACSU  -            368   1.2e-09   38.2   3.8   1   2   4.1e-13   1.2e-09   38.2   3.8     2    58    63   119    62   119 0.95 Phage integrase, N-terminal SAM-like domain
Integrase_AP2        PF14657.1     46 sp|P96629|INT_BACSU  -            368   4.7e-09   35.8   1.4   1   1   1.9e-12   5.7e-09   35.6   0.0     2    43    11    52    10    55 0.95 AP2-like DNA-binding integrase domain
Phage_int_SAM_4      PF13495.1     85 sp|P96629|INT_BACSU  -            368   0.00031   20.9   0.2   1   1   2.6e-07   0.00076   19.7   0.2    32    82    98   146    78   149 0.86 Phage integrase, N-terminal SAM-like domain
Phage_int_SAM_1      PF02899.12    84 sp|P96629|INT_BACSU  -            368     0.013   15.6   0.6   1   1   1.6e-05     0.048   13.8   0.0    33    83    98   145    92   146 0.89 Phage integrase, N-terminal SAM-like domain
Oligomerisation      PF02410.10   100 sp|P54457|IOJAP_BACSU -            118   1.7e-33  114.6   0.5   1   1   1.3e-37   1.9e-33  114.4   0.5     2   100     7   104     6   104 0.97 Oligomerisation domain
Aldedh               PF00171.17   462 sp|P42412|IOLA_BACSU -            487  2.6e-155  517.2   0.1   1   1    2e-159    3e-155  517.0   0.1     1   462    15   477    15   477 0.98 Aldehyde dehydrogenase family
KduI                 PF04962.7    262 sp|P42413|IOLB_BACSU -            271    5e-108  360.1   0.5   1   1  3.8e-112  5.6e-108  359.9   0.5     7   262    12   268     4   268 0.97 KduI/IolB family
PfkB                 PF00294.19   301 sp|P42414|IOLC_BACSU -            325   1.1e-70  238.1   0.2   1   1   3.4e-74   1.3e-70  237.9   0.2     3   300    12   313    10   314 0.97 pfkB family carbohydrate kinase
Phos_pyr_kin         PF08543.7    246 sp|P42414|IOLC_BACSU -            325    0.0015   17.7   0.0   1   1   7.7e-07    0.0029   16.8   0.0   108   225   187   295   153   310 0.84 Phosphomethylpyrimidine kinase
TPP_enzyme_C         PF02775.16   153 sp|P42415|IOLD_BACSU -            637     2e-43  147.6   0.1   2   2   4.9e-46   1.4e-42  144.8   0.0     2   153   440   592   439   592 0.96 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain
TPP_enzyme_N         PF02776.13   172 sp|P42415|IOLD_BACSU -            637   4.4e-32  110.9   0.7   1   1   2.8e-35   8.3e-32  110.0   0.2     2   170     8   198     7   200 0.92 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain
TPP_enzyme_M         PF00205.17   137 sp|P42415|IOLD_BACSU -            637   2.9e-30  104.8   0.2   1   1   2.3e-33   6.9e-30  103.5   0.2     2   137   221   354   220   354 0.94 Thiamine pyrophosphate enzyme, central domain
CO_dh                PF02552.11   168 sp|P42415|IOLD_BACSU -            637     0.036   13.6   0.0   1   1   2.8e-05     0.083   12.4   0.0    22    70   217   265   207   311 0.88 CO dehydrogenase beta subunit/acetyl-CoA synthase epsilon subunit
AP_endonuc_2         PF01261.19   213 sp|P42416|IOLE_BACSU -            297   1.9e-33  115.5   0.3   1   1   1.7e-37   2.5e-33  115.1   0.3     7   213    39   247    33   247 0.91 Xylose isomerase-like TIM barrel
MFS_1                PF07690.11   352 sp|P42417|IOLF_BACSU -            438   5.9e-38  130.4  63.8   1   2   3.1e-36   1.1e-32  113.0  34.9    19   350    33   370     9   372 0.77 Major Facilitator Superfamily
MFS_1                PF07690.11   352 sp|P42417|IOLF_BACSU -            438   5.9e-38  130.4  63.8   2   2   2.2e-11   8.1e-08   31.3  20.9    29   187   261   421   260   433 0.79 Major Facilitator Superfamily
Sugar_tr             PF00083.19   451 sp|P42417|IOLF_BACSU -            438   1.5e-25   89.7  33.4   1   1   9.6e-28   3.6e-24   85.1  33.2    52   450    55   420    32   421 0.81 Sugar (and other) transporter
MFS_2                PF13347.1    428 sp|P42417|IOLF_BACSU -            438   5.3e-09   34.9  32.1   1   3   1.7e-07   0.00063   18.2   4.8   268   342    57   129    10   137 0.88 MFS/sugar transport protein
MFS_2                PF13347.1    428 sp|P42417|IOLF_BACSU -            438   5.3e-09   34.9  32.1   2   3   9.4e-10   3.5e-06   25.6   9.0   152   331   146   334   133   345 0.69 MFS/sugar transport protein
OAD_gamma            PF04277.8     79 sp|P42417|IOLF_BACSU -            438     0.013   15.8   0.5   1   1   1.6e-05     0.058   13.7   0.0     4    49   161   210   159   219 0.67 Oxaloacetate decarboxylase, gamma chain
GFO_IDH_MocA         PF01408.17   120 sp|P26935|IOLG_BACSU -            344   3.1e-28   98.7   0.3   1   1   2.4e-31     6e-28   97.7   0.3     1   120     3   125     3   125 0.98 Oxidoreductase family, NAD-binding Rossmann fold
GFO_IDH_MocA_C       PF02894.12   115 sp|P26935|IOLG_BACSU -            344     1e-13   51.0   0.0   1   1   6.7e-17   1.7e-13   50.4   0.0     1   114   137   239   137   240 0.97 Oxidoreductase family, C-terminal alpha/beta domain
F420_oxidored        PF03807.12    96 sp|P26935|IOLG_BACSU -            344   4.6e-05   23.7   0.2   1   1   3.6e-08   8.9e-05   22.8   0.2     1    81     4    87     4    94 0.78 NADP oxidoreductase coenzyme F420-dependent
NAD_binding_2        PF03446.10   163 sp|P26935|IOLG_BACSU -            344     0.006   16.4   0.1   1   2   1.2e-05      0.03   14.1   0.0     3    57     4    64     2    98 0.73 NAD binding domain of 6-phosphogluconate dehydrogenase
2-Hacid_dh_C         PF02826.14   178 sp|P26935|IOLG_BACSU -            344     0.012   14.7   0.1   1   1   1.3e-05     0.032   13.3   0.0    38    83     4    48     2    63 0.72 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain
NAD_binding_3        PF03447.11   117 sp|P26935|IOLG_BACSU -            344     0.032   14.6   0.2   1   1   2.7e-05     0.066   13.6   0.2     1    84     9    91     9   115 0.80 Homoserine dehydrogenase, NAD binding domain
AP_endonuc_2         PF01261.19   213 sp|P42419|IOLI_BACSU -            278   1.3e-30  106.3   0.1   1   2   2.6e-34   3.8e-30  104.7   0.1     1   212    20   224    20   225 0.94 Xylose isomerase-like TIM barrel
F_bP_aldolase        PF01116.15   287 sp|P42420|IOLJ_BACSU -            290   1.2e-99  333.0   0.6   1   1    9e-104   1.3e-99  332.9   0.6     2   287     3   284     2   284 0.98 Fructose-bisphosphate aldolase class-II
Aldo_ket_red         PF00248.16   283 sp|P46336|IOLS_BACSU -            310   2.9e-77  259.2   0.0   1   1   2.2e-81   3.3e-77  259.1   0.0     1   282    15   309    15   310 0.98 Aldo/keto reductase family
Sugar_tr             PF00083.19   451 sp|O34718|IOLT_BACSU -            473    8e-113  377.3  25.8   1   1  1.8e-116  9.1e-113  377.1  25.8     3   451    16   455    14   455 0.96 Sugar (and other) transporter
MFS_1                PF07690.11   352 sp|O34718|IOLT_BACSU -            473   6.2e-33  113.9  63.2   1   2   1.9e-34   9.3e-31  106.8  29.5     3   342    20   396    18   397 0.80 Major Facilitator Superfamily
MFS_1                PF07690.11   352 sp|O34718|IOLT_BACSU -            473   6.2e-33  113.9  63.2   2   2     2e-08   9.8e-05   21.2  25.7    41   177   300   445   289   465 0.82 Major Facilitator Superfamily
MFS_1_like           PF12832.2     77 sp|O34718|IOLT_BACSU -            473      0.17   11.6   5.9   1   3   0.00014       0.7    9.7   0.0    14    75    30    90    24    92 0.93 MFS_1 like family
GFO_IDH_MocA         PF01408.17   120 sp|O32223|IOLW_BACSU -            358   2.5e-25   89.3   0.1   1   1   1.6e-28     4e-25   88.6   0.1     1   120    14   131    14   131 0.96 Oxidoreductase family, NAD-binding Rossmann fold
GFO_IDH_MocA_C       PF02894.12   115 sp|O32223|IOLW_BACSU -            358   1.6e-18   66.5   0.0   1   1     1e-21   2.6e-18   65.9   0.0     1   115   143   250   143   250 0.96 Oxidoreductase family, C-terminal alpha/beta domain
NAD_binding_3        PF03447.11   117 sp|O32223|IOLW_BACSU -            358   0.00016   22.0   0.0   1   1   1.5e-07   0.00036   20.9   0.0    13   112    32   125    20   129 0.81 Homoserine dehydrogenase, NAD binding domain
Semialdhyde_dh       PF01118.19   121 sp|O32223|IOLW_BACSU -            358     0.013   15.7   0.0   1   1   1.1e-05     0.027   14.7   0.0     1    94    15   101    15   104 0.77 Semialdehyde dehydrogenase, NAD binding domain
DapB_N               PF01113.15   124 sp|O32223|IOLW_BACSU -            358     0.098   12.5   0.0   1   1   7.3e-05      0.18   11.7   0.0    44   119    48   126    14   129 0.74 Dihydrodipicolinate reductase, N-terminus
CoA_binding          PF02629.14    96 sp|O32223|IOLW_BACSU -            358      0.11   13.0   0.0   1   1   7.8e-05      0.19   12.2   0.0     5    90    15   101    11   103 0.85 CoA binding domain
GFO_IDH_MocA         PF01408.17   120 sp|P40332|IOLX_BACSU -            342   1.9e-31  109.0   0.0   1   1   4.5e-35   3.3e-31  108.2   0.0     1   120     5   125     5   125 0.97 Oxidoreductase family, NAD-binding Rossmann fold
GFO_IDH_MocA_C       PF02894.12   115 sp|P40332|IOLX_BACSU -            342   3.1e-15   55.9   0.0   1   1   6.6e-19   4.9e-15   55.3   0.0     1   114   137   244   137   245 0.96 Oxidoreductase family, C-terminal alpha/beta domain
Aminotran_5          PF00266.14   371 sp|O34599|ISCS1_BACSU -            379     1e-87  294.3   0.0   1   1   4.3e-91   1.3e-87  294.0   0.0     1   369     4   365     4   366 0.93 Aminotransferase class-V
Beta_elim_lyase      PF01212.16   290 sp|O34599|ISCS1_BACSU -            379   4.8e-07   29.2   0.1   1   1   2.3e-10   6.8e-07   28.7   0.1    30   211    46   249    37   325 0.70 Beta-eliminating lyase
DegT_DnrJ_EryC1      PF01041.12   363 sp|O34599|ISCS1_BACSU -            379   2.1e-05   23.7   0.1   1   2   2.3e-08   6.7e-05   22.0   0.1    32   152    52   182    37   187 0.82 DegT/DnrJ/EryC1/StrS aminotransferase family
Aminotran_1_2        PF00155.16   363 sp|O34599|ISCS1_BACSU -            379   5.4e-05   22.3   0.0   1   2   1.2e-07   0.00035   19.6   0.0    47   187    48   176     4   190 0.81 Aminotransferase class I and II
Pyridoxal_deC        PF00282.14   373 sp|O34599|ISCS1_BACSU -            379    0.0017   16.8   0.1   1   1   9.1e-07    0.0027   16.2   0.1   140   234    90   180    66   203 0.80 Pyridoxal-dependent decarboxylase conserved domain
Aminotran_5          PF00266.14   371 sp|O34874|ISCS2_BACSU -            381     3e-78  263.1   0.9   1   1   1.5e-81   3.8e-78  262.8   0.9     1   365     2   359     2   363 0.97 Aminotransferase class-V
Cys_Met_Meta_PP      PF01053.15   386 sp|O34874|ISCS2_BACSU -            381   1.9e-05   23.1   0.1   1   1   1.3e-08   3.1e-05   22.4   0.1    51   203    36   203     8   219 0.80 Cys/Met metabolism PLP-dependent enzyme
Beta_elim_lyase      PF01212.16   290 sp|O34874|ISCS2_BACSU -            381   0.00011   21.4   0.4   1   1     1e-07   0.00025   20.2   0.4    30   164    44   176    35   291 0.70 Beta-eliminating lyase
DegT_DnrJ_EryC1      PF01041.12   363 sp|O34874|ISCS2_BACSU -            381   0.00023   20.3   0.1   1   3   4.8e-06     0.012   14.6   0.0    38   133    56   159    36   173 0.80 DegT/DnrJ/EryC1/StrS aminotransferase family
OB_RNB               PF08206.6     58 sp|O34874|ISCS2_BACSU -            381     0.099   12.1   0.1   1   1   0.00016      0.39   10.2   0.0    18    44   121   147   108   156 0.82 Ribonuclease B OB domain
Aminotran_5          PF00266.14   371 sp|P38033|ISCS_BACSU -            395   1.1e-92  310.6   0.1   1   1   1.9e-96   1.4e-92  310.3   0.1     1   371     2   366     2   366 0.98 Aminotransferase class-V
Transketolase_C      PF02780.15   124 sp|P38033|ISCS_BACSU -            395      0.14   12.1   0.0   1   1   4.4e-05      0.32   10.9   0.0    14    89    91   169    84   200 0.78 Transketolase, C-terminal domain
Peptidase_S8         PF00082.17   282 sp|P11018|ISP1_BACSU -            319   3.4e-66  223.2   0.5   1   1   5.6e-70   4.1e-66  222.9   0.5     1   259    45   288    45   303 0.87 Subtilase family
Peripla_BP_4         PF13407.1    257 sp|P11018|ISP1_BACSU -            319     0.042   13.2   1.4   2   2   1.2e-05     0.091   12.0   0.2    46    86   133   176   123   248 0.83 Periplasmic binding protein domain
polyprenyl_synt      PF00348.12   260 sp|P54383|ISPA_BACSU -            296   2.6e-81  272.2   0.1   1   1   2.2e-85   3.2e-81  271.9   0.1     2   234    34   271    33   283 0.98 Polyprenyl synthetase
IspD                 PF01128.14   221 sp|Q06755|ISPD_BACSU -            232   3.7e-96  320.9   0.5   1   1   1.4e-99   4.2e-96  320.7   0.5     3   220     5   224     3   225 0.99 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase
NTP_transf_3         PF12804.2    160 sp|Q06755|ISPD_BACSU -            232   5.6e-16   59.0   0.0   1   1   2.1e-19   6.3e-16   58.8   0.0     1   124     5   135     5   195 0.85 MobA-like NTP transferase domain
NTP_transferase      PF00483.18   248 sp|Q06755|ISPD_BACSU -            232   0.00024   20.5   0.1   1   1   1.3e-07   0.00039   19.8   0.1     3   139     6   131     5   142 0.81 Nucleotidyl transferase
CTP_transf_3         PF02348.14   217 sp|Q06755|ISPD_BACSU -            232    0.0061   16.2   0.1   1   1     3e-06    0.0088   15.6   0.1     3   128     6   143     5   181 0.77 Cytidylyltransferase
DUF2888              PF11135.3    144 sp|Q06755|ISPD_BACSU -            232     0.096   12.4   0.0   1   1   5.9e-05      0.17   11.5   0.0    56   120   137   207   117   216 0.69 Protein of unknown function (DUF2888)
GHMP_kinases_N       PF00288.21    67 sp|P37550|ISPE_BACSU -            289   6.6e-13   48.5   1.7   1   1   1.6e-16   1.2e-12   47.6   1.7     2    67    87   144    86   144 0.96 GHMP kinases N terminal domain
GHMP_kinases_C       PF08544.8     85 sp|P37550|ISPE_BACSU -            289   2.1e-09   37.4   0.0   1   1   5.6e-13   4.2e-09   36.4   0.0     1    80   197   270   197   275 0.91 GHMP kinases C terminal
YgbB                 PF02542.11   157 sp|Q06756|ISPF_BACSU -            158   3.7e-68  228.2   0.0   1   1   2.8e-72   4.2e-68  228.1   0.0     1   156     2   157     2   158 0.99 YgbB family
GcpE                 PF04551.9    359 sp|P54482|ISPG_BACSU -            377  1.3e-138  461.7   3.1   1   1  2.1e-142  1.5e-138  461.4   3.1     1   356    12   353    12   356 0.99 GcpE protein
adh_short            PF00106.20   167 sp|P54482|ISPG_BACSU -            377     0.058   13.3   0.1   2   2   0.00012      0.87    9.4   0.0    46    98    97   148    90   175 0.84 short chain dehydrogenase
LYTB                 PF02401.13   281 sp|P54473|ISPH_BACSU -            314  8.6e-102  339.8   1.5   1   1  1.3e-105  9.8e-102  339.6   1.5     1   281     3   287     3   287 0.97 LytB protein
CoA_binding_2        PF13380.1    116 sp|P54473|ISPH_BACSU -            314      0.02   15.0   1.3   1   2   0.00012      0.89    9.7   0.0    75   113    68   106    62   109 0.87 CoA binding domain
Prenyltransf         PF01255.14   223 sp|O31751|ISPT_BACSU -            260   1.1e-83  279.7   0.0   1   1   9.5e-88   1.4e-83  279.4   0.0     1   222    38   258    38   259 0.99 Putative undecaprenyl diphosphate synthase
PfkB                 PF00294.19   301 sp|O31714|K1PF_BACSU -            303   1.7e-61  207.9   0.1   1   1   4.3e-65   2.1e-61  207.6   0.1     7   289    11   280     5   290 0.92 pfkB family carbohydrate kinase
Phos_pyr_kin         PF08543.7    246 sp|O31714|K1PF_BACSU -            303   3.3e-06   26.4   0.0   1   1   1.6e-09   8.1e-06   25.1   0.0   121   223   176   271   139   280 0.84 Phosphomethylpyrimidine kinase
Carb_kinase          PF01256.12   242 sp|O31714|K1PF_BACSU -            303    0.0026   17.0   0.1   1   1   6.5e-07    0.0032   16.7   0.1    81   198   143   259    89   293 0.83 Carbohydrate kinase
ADK                  PF00406.17   151 sp|P16304|KAD_BACSU  -            217   6.3e-63  211.1   0.0   1   1   2.5e-66   7.4e-63  210.9   0.0     1   150     5   190     5   191 0.99 Adenylate kinase
ADK_lid              PF05191.9     36 sp|P16304|KAD_BACSU  -            217   1.2e-18   66.4   0.8   1   1   6.9e-22     2e-18   65.7   0.8     1    36   127   162   127   162 0.99 Adenylate kinase, active site lid
AAA_33               PF13671.1    143 sp|P16304|KAD_BACSU  -            217   3.7e-07   30.0   0.0   1   1   2.5e-10   7.4e-07   29.1   0.0     3   119     4   128     3   138 0.81 AAA domain
AAA_17               PF13207.1    121 sp|P16304|KAD_BACSU  -            217   4.1e-07   30.8   0.1   1   1   2.1e-10   6.1e-07   30.2   0.1     4   110     5   123     2   166 0.68 AAA domain
AAA_18               PF13238.1    129 sp|P16304|KAD_BACSU  -            217     7e-05   23.1   0.1   1   1   4.5e-08   0.00013   22.2   0.0     2   113     4   128     3   131 0.88 AAA domain
LAM_C                PF12544.3    127 sp|O34676|KAMA_BACSU -            471   1.2e-58  196.6   0.0   1   1   6.2e-62   2.3e-58  195.7   0.0     1   127   321   447   321   447 0.99 Lysine-2,3-aminomutase
Radical_SAM          PF04055.16   166 sp|O34676|KAMA_BACSU -            471   4.1e-08   33.5   0.1   1   1   2.3e-10   8.6e-07   29.2   0.1     3   157   130   277   128   282 0.77 Radical SAM superfamily
Fer4_14              PF13394.1    119 sp|O34676|KAMA_BACSU -            471     8e-06   25.8   0.1   1   2   7.7e-08   0.00028   20.8   0.0     1    77   127   200   127   219 0.85 4Fe-4S single cluster domain
Fer4_12              PF13353.1    139 sp|O34676|KAMA_BACSU -            471   9.7e-05   22.5   0.0   1   1   5.7e-08   0.00021   21.4   0.0     8    81   127   199   116   255 0.87 4Fe-4S single cluster domain
Cytidylate_kin       PF02224.13   158 sp|P38493|KCY_BACSU  -            224   3.1e-63  211.9   5.4   1   1   3.7e-66   4.5e-63  211.3   5.4     2   158    61   217    60   217 0.99 Cytidylate kinase
AAA_17               PF13207.1    121 sp|P38493|KCY_BACSU  -            224     4e-12   46.9   2.5   1   1     1e-14   1.3e-11   45.4   1.7     2   120     7   133     6   184 0.85 AAA domain
Cytidylate_kin2      PF13189.1    179 sp|P38493|KCY_BACSU  -            224     3e-07   30.5   5.3   1   1   4.6e-10   5.7e-07   29.6   5.3     2   152     7   183     6   189 0.77 Cytidylate kinase-like family
AAA_18               PF13238.1    129 sp|P38493|KCY_BACSU  -            224   1.7e-06   28.3   2.9   1   1   1.1e-08   1.3e-05   25.4   2.9     1   113     7   161     7   201 0.72 AAA domain
SKI                  PF01202.17   158 sp|P38493|KCY_BACSU  -            224     4e-05   23.5   3.7   1   2   1.5e-06    0.0018   18.1   0.1     2    54    14    66    13   101 0.80 Shikimate kinase
AAA_33               PF13671.1    143 sp|P38493|KCY_BACSU  -            224   0.00023   21.0   0.3   1   2   6.6e-07   0.00082   19.2   0.0     6    85    11    91     7   128 0.66 AAA domain
AAA_22               PF13401.1    131 sp|P38493|KCY_BACSU  -            224    0.0034   17.5   0.2   1   1   6.9e-06    0.0085   16.2   0.0     2    68     2    76     1   127 0.67 AAA domain
ABC_tran             PF00005.22   137 sp|P38493|KCY_BACSU  -            224     0.023   14.9   0.5   1   1   9.2e-05      0.11   12.7   0.5    13    76     6    68     1   222 0.66 ABC transporter
ADK                  PF00406.17   151 sp|P38493|KCY_BACSU  -            224     0.025   14.4   0.2   1   1   7.4e-05     0.092   12.6   0.0     3    35    11    43     9    70 0.89 Adenylate kinase
TPX2                 PF06886.6     57 sp|P38493|KCY_BACSU  -            224     0.039   14.0   1.6   1   1   0.00011      0.13   12.3   1.6     3    48   150   194   149   195 0.93 Targeting protein for Xklp2 (TPX2)
AAA_14               PF13173.1    128 sp|P38493|KCY_BACSU  -            224     0.049   13.5   0.0   1   1    0.0001      0.13   12.1   0.0     4    39     6    37     3    81 0.69 AAA domain
ATP_bind_2           PF03668.10   284 sp|P38493|KCY_BACSU  -            224      0.28   10.1   4.5   2   2    0.0001      0.13   11.3   1.2    82   156   141   221   131   224 0.73 P-loop ATPase protein family
DHDPS                PF00701.17   289 sp|P42235|KDGD_BACSU -            308  2.2e-100  334.9   0.0   1   1  3.4e-104  2.5e-100  334.7   0.0     3   288     9   297     7   298 0.99 Dihydrodipicolinate synthetase family
SidE                 PF12252.3   1439 sp|P42235|KDGD_BACSU -            308     0.083   10.1   0.0   1   1   1.5e-05      0.11    9.7   0.0    10    83    37   111    31   136 0.84 Dot/Icm substrate protein
PfkB                 PF00294.19   301 sp|P50845|KDGK_BACSU -            324   2.2e-69  233.8   0.0   1   1   1.7e-73   2.5e-69  233.6   0.0     4   300     5   303     2   304 0.98 pfkB family carbohydrate kinase
KdgT                 PF03812.8    314 sp|P50847|KDGT_BACSU -            330  5.8e-173  574.3  28.7   1   1  1.3e-176  6.6e-173  574.1  28.7     1   314     1   314     1   314 1.00 2-keto-3-deoxygluconate permease
DUF3334              PF11813.3    229 sp|P50847|KDGT_BACSU -            330      0.14   11.6   0.3   1   1   4.9e-05      0.24   10.8   0.3    34   105    84   154    79   163 0.85 Protein of unknown function (DUF3334)
Nuc_sug_transp       PF04142.10   244 sp|P50847|KDGT_BACSU -            330         1    8.4   5.6   1   2   0.00018      0.88    8.6   0.4   173   201   102   130    75   133 0.81 Nucleotide-sugar transporter
adh_short            PF00106.20   167 sp|P50842|KDUD_BACSU -            254   8.6e-30  103.8   0.1   1   1   5.1e-33   1.1e-29  103.5   0.1     1   166    13   177    13   178 0.94 short chain dehydrogenase
adh_short_C2         PF13561.1    241 sp|P50842|KDUD_BACSU -            254   1.5e-27   96.9   0.0   1   1   8.6e-31   1.8e-27   96.6   0.0     6   239    22   250    19   252 0.89 Enoyl-(Acyl carrier protein) reductase
KR                   PF08659.5    181 sp|P50842|KDUD_BACSU -            254   8.1e-09   35.3   0.1   1   1     5e-12   1.1e-08   35.0   0.1     2   177    14   191    13   195 0.80 KR domain
Epimerase            PF01370.16   236 sp|P50842|KDUD_BACSU -            254     6e-05   22.5   0.1   1   1   7.9e-08   0.00017   21.1   0.1     1    99    15   117    15   214 0.69 NAD dependent epimerase/dehydratase family
2-Hacid_dh_C         PF02826.14   178 sp|P50842|KDUD_BACSU -            254     0.011   14.9   0.0   1   1   8.8e-06     0.019   14.1   0.0    32    73     8    50     4    91 0.86 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain
Eno-Rase_NADH_b      PF12242.3     78 sp|P50842|KDUD_BACSU -            254     0.015   15.0   1.4   1   1   1.3e-05     0.027   14.2   1.4    36    71    10    43     2    50 0.84 NAD(P)H binding domain of trans-2-enoyl-CoA reductase
RmlD_sub_bind        PF04321.12   287 sp|P50842|KDUD_BACSU -            254     0.046   12.5   0.0   1   1   3.7e-05     0.077   11.8   0.0     3    74    15   110    13   130 0.89 RmlD substrate binding domain
KduI                 PF04962.7    262 sp|P50843|KDUI_BACSU -            275   2.4e-40  138.2   0.0   1   1     2e-44     3e-40  137.9   0.0     4   258    27   267    24   271 0.93 KduI/IolB family
Guanylate_kin        PF00625.16   183 sp|O34328|KGUA_BACSU -            204   1.5e-57  194.0   0.0   1   1   1.4e-60   1.8e-57  193.7   0.0     4   182     7   185     4   186 0.98 Guanylate kinase
AAA_18               PF13238.1    129 sp|O34328|KGUA_BACSU -            204   0.00082   19.6   0.0   1   1   1.3e-06    0.0016   18.7   0.0     1   117     8   143     8   160 0.76 AAA domain
AAA_17               PF13207.1    121 sp|O34328|KGUA_BACSU -            204    0.0015   19.3   0.1   1   1   6.1e-06    0.0075   17.0   0.1     2    67     8    97     7   202 0.58 AAA domain
AAA_22               PF13401.1    131 sp|O34328|KGUA_BACSU -            204     0.012   15.7   0.0   1   1   1.9e-05     0.024   14.7   0.0     3    31     4    32     1    52 0.81 AAA domain
DUF258               PF03193.11   161 sp|O34328|KGUA_BACSU -            204      0.02   14.0   0.1   1   1   3.3e-05      0.04   13.0   0.1    37    63     7    33     2    52 0.85 Protein of unknown function, DUF258
MMR_HSR1             PF01926.18   116 sp|O34328|KGUA_BACSU -            204     0.026   14.4   0.1   1   1    0.0001      0.13   12.2   0.1     2    45     8    68     7   201 0.60 50S ribosome-binding GTPase
Phage_connect_1      PF05135.8    101 sp|O34328|KGUA_BACSU -            204     0.035   14.2   0.1   1   1   8.7e-05      0.11   12.7   0.1     6    37   128   159   103   185 0.82 Phage gp6-like head-tail connector protein
ABC_tran             PF00005.22   137 sp|O34328|KGUA_BACSU -            204     0.054   13.8   0.0   1   1   5.6e-05     0.069   13.4   0.0    10    80     4    81     2   191 0.72 ABC transporter
AAA_33               PF13671.1    143 sp|O34328|KGUA_BACSU -            204     0.097   12.5   0.1   1   1    0.0004       0.5   10.2   0.1     1   122     7   142     7   163 0.56 AAA domain
HEM4                 PF02602.10   231 sp|O34328|KGUA_BACSU -            204       0.1   11.8   0.1   1   1   0.00016       0.2   10.8   0.0   113   165   125   180    86   186 0.81 Uroporphyrinogen-III synthase HemD
AAA_16               PF13191.1    185 sp|O34328|KGUA_BACSU -            204      0.11   12.4   0.0   1   1   0.00011      0.13   12.2   0.0    23    51     4    32     1   123 0.83 AAA ATPase domain
AAA_29               PF13555.1     62 sp|O34328|KGUA_BACSU -            204      0.16   11.5   0.0   1   1   0.00028      0.34   10.4   0.0    23    43     5    25     1    27 0.80 P-loop containing region of AAA domain
GHMP_kinases_N       PF00288.21    67 sp|P04948|KHSE_BACSU -            309   6.9e-17   61.2   1.9   1   3   0.00011      0.79    9.8   0.0    24    60    26    62    25    68 0.85 GHMP kinases N terminal domain
GHMP_kinases_N       PF00288.21    67 sp|P04948|KHSE_BACSU -            309   6.9e-17   61.2   1.9   2   3   8.8e-17   6.5e-13   48.5   1.2     1    67    83   144    83   144 0.95 GHMP kinases N terminal domain
GHMP_kinases_C       PF08544.8     85 sp|P04948|KHSE_BACSU -            309   1.6e-10   41.0   0.1   1   1   6.7e-14     5e-10   39.4   0.0     1    84   204   282   204   283 0.95 GHMP kinases C terminal
TK                   PF00265.13   176 sp|Q03221|KITH_BACSU -            195   4.7e-64  215.1   0.0   1   1   3.6e-68   5.3e-64  214.9   0.0     1   176     8   187     8   187 0.99 Thymidine kinase
Pribosyltran_N       PF13793.1    116 sp|P14193|KPRS_BACSU -            317   3.5e-52  175.0   0.3   1   3   2.4e-54   8.9e-51  170.5   0.0     1   116    10   126    10   126 0.99 N-terminal domain of ribose phosphate pyrophosphokinase
Pribosyl_synth       PF14572.1    184 sp|P14193|KPRS_BACSU -            317   2.1e-28   99.3   2.0   2   2     1e-29   3.9e-26   91.9   0.2    74   183   208   316   198   317 0.94 Phosphoribosyl synthetase-associated domain
Pribosyltran         PF00156.22   125 sp|P14193|KPRS_BACSU -            317   9.9e-15   54.3   0.4   2   2   2.7e-18   9.9e-15   54.3   0.4    18   124   158   253   153   254 0.92 Phosphoribosyl transferase domain
UPRTase              PF14681.1    207 sp|P14193|KPRS_BACSU -            317     0.011   15.0   0.1   1   1     4e-06     0.015   14.5   0.1   112   183   208   279   151   289 0.84 Uracil phosphoribosyltransferase
PK                   PF00224.16   348 sp|P80885|KPYK_BACSU -            585  3.6e-157  522.4   7.5   1   1  2.3e-160  5.6e-157  521.7   7.5     1   346     1   343     1   345 0.99 Pyruvate kinase, barrel domain
PK_C                 PF02887.11   117 sp|P80885|KPYK_BACSU -            585   1.3e-35  121.4   3.1   1   1   1.7e-38   4.1e-35  119.8   3.1     1   117   357   471   357   471 0.99 Pyruvate kinase, alpha/beta domain
PEP-utilizers        PF00391.18    81 sp|P80885|KPYK_BACSU -            585   3.6e-22   77.6   1.6   1   1   1.5e-25   3.6e-22   77.6   1.6     2    81   497   575   496   575 0.96 PEP-utilising enzyme, mobile domain
HpcH_HpaI            PF03328.9    221 sp|P80885|KPYK_BACSU -            585   0.00019   20.3   0.4   1   1   2.3e-07   0.00057   18.8   0.4    82   168   183   261   163   311 0.71 HpcH/HpaI aldolase/citrate lyase family
IF2_N                PF04760.10    54 sp|P80885|KPYK_BACSU -            585    0.0016   18.0   0.2   2   2   3.7e-06    0.0092   15.6   0.0    10    40   253   282   253   285 0.87 Translation initiation factor IF-2, N-terminal region
DRTGG                PF07085.7    105 sp|P80885|KPYK_BACSU -            585      0.52    9.9   4.5   3   3   0.00012      0.29   10.7   0.2     8    89   473   552   468   563 0.74 DRTGG domain
Thymidylate_kin      PF02223.12   186 sp|P37537|KTHY_BACSU -            212   1.4e-60  203.9   0.0   1   1   2.3e-63   1.6e-60  203.7   0.0     1   186     8   199     8   199 0.98 Thymidylate kinase
AAA_28               PF13521.1    163 sp|P37537|KTHY_BACSU -            212   6.3e-06   26.2   0.0   1   1   1.2e-08   8.1e-06   25.8   0.0     2   148     6   179     5   193 0.56 AAA domain
AAA_18               PF13238.1    129 sp|P37537|KTHY_BACSU -            212   2.5e-05   24.5   0.2   1   1   9.9e-08   6.7e-05   23.2   0.2     1   119     6   156     6   210 0.75 AAA domain
AAA_30               PF13604.1    196 sp|P37537|KTHY_BACSU -            212    0.0004   20.0   0.3   1   1   1.1e-06   0.00077   19.0   0.0    19    51     4    36     1    43 0.91 AAA domain
AAA_17               PF13207.1    121 sp|P37537|KTHY_BACSU -            212   0.00064   20.5   0.1   1   1   3.1e-06    0.0021   18.8   0.1     2    63     6    66     5   209 0.67 AAA domain
AAA_22               PF13401.1    131 sp|P37537|KTHY_BACSU -            212    0.0025   17.9   0.0   1   1   9.4e-06    0.0064   16.6   0.0     5    73     4    76     1   121 0.73 AAA domain
MobB                 PF03205.9    140 sp|P37537|KTHY_BACSU -            212    0.0043   16.7   0.0   1   1     1e-05    0.0069   16.0   0.0     4    33     7    36     4    67 0.90 Molybdopterin guanine dinucleotide synthesis protein B
ATP_bind_1           PF03029.12   238 sp|P37537|KTHY_BACSU -            212    0.0073   15.8   0.1   1   2   0.00058      0.39   10.2   0.0     3    27    10    34     8    88 0.91 Conserved hypothetical ATP binding protein
PPK2                 PF03976.9    229 sp|P37537|KTHY_BACSU -            212    0.0096   15.2   0.1   1   2   0.00072      0.48    9.6   0.0    32    69     4    41     2    49 0.91 Polyphosphate kinase 2 (PPK2)
KTI12                PF08433.5    270 sp|P37537|KTHY_BACSU -            212      0.02   14.1   0.0   1   1   9.4e-05     0.063   12.4   0.0     4    78     6    96     4   111 0.88 Chromatin associated protein KTI12
NTPase_1             PF03266.10   168 sp|P37537|KTHY_BACSU -            212     0.024   14.3   0.2   1   1     9e-05      0.06   13.0   0.2     4    30     6    34     4    61 0.88 NTPase
dNK                  PF01712.14   146 sp|P37537|KTHY_BACSU -            212     0.026   14.4   0.0   1   1   5.7e-05     0.038   13.8   0.0    67   105   128   177   113   208 0.69 Deoxynucleoside kinase
PRK                  PF00485.13   194 sp|P37537|KTHY_BACSU -            212     0.027   14.0   0.0   1   1   6.1e-05     0.041   13.4   0.0     2    33     6    42     5    91 0.76 Phosphoribulokinase / Uridine kinase family
AAA_33               PF13671.1    143 sp|P37537|KTHY_BACSU -            212     0.044   13.6   0.0   1   1   0.00013     0.086   12.7   0.0     2    29     6    33     5   175 0.58 AAA domain
Arch_ATPase          PF01637.13   234 sp|P37537|KTHY_BACSU -            212     0.058   13.0   0.2   1   2    0.0012      0.83    9.2   0.0    27    49    10    32     3    95 0.83 Archaeal ATPase
AAA_23               PF13476.1    202 sp|P37537|KTHY_BACSU -            212     0.066   13.5   0.3   1   1   0.00016       0.1   12.8   0.3    24    47     8    31     3   211 0.79 AAA domain
AAA_29               PF13555.1     62 sp|P37537|KTHY_BACSU -            212      0.08   12.4   0.0   1   1    0.0002      0.14   11.7   0.0    27    51     7    31     1    38 0.85 P-loop containing region of AAA domain
AAA_5                PF07728.9    139 sp|P37537|KTHY_BACSU -            212     0.082   12.6   0.1   1   1   0.00027      0.18   11.5   0.1     5    35     9    39     6    95 0.89 AAA domain (dynein-related subfamily)
APS_kinase           PF01583.15   157 sp|P37537|KTHY_BACSU -            212     0.098   12.3   0.0   1   1   0.00027      0.18   11.4   0.0     2    34     3    35     2    39 0.91 Adenylylsulphate kinase
AAA_16               PF13191.1    185 sp|P37537|KTHY_BACSU -            212     0.099   12.6   0.0   1   1   0.00026      0.18   11.7   0.0    27    52     6    31     2   116 0.79 AAA ATPase domain
PIF1                 PF05970.9    364 sp|P37537|KTHY_BACSU -            212       0.1   11.5   0.0   1   2    0.0007      0.47    9.3   0.0    22    58     3    39     1    86 0.89 PIF1-like helicase
NACHT                PF05729.7    166 sp|P37537|KTHY_BACSU -            212      0.12   12.0   0.0   1   1   0.00032      0.21   11.2   0.0     3    28     6    31     4    38 0.84 NACHT domain
TrkA_N               PF02254.13   116 sp|O32080|KTRA_BACSU -            222   3.6e-27   94.6   0.7   1   1     1e-29   7.5e-27   93.6   0.3     1   116     9   124     9   124 0.96 TrkA-N domain
TrkA_C               PF02080.16    71 sp|O32080|KTRA_BACSU -            222   1.6e-12   46.7   0.0   1   1     5e-15   3.7e-12   45.6   0.0     8    68   158   219   152   220 0.90 TrkA-C domain
NAD_binding_2        PF03446.10   163 sp|O32080|KTRA_BACSU -            222   5.9e-07   29.4   0.0   1   1   1.3e-09   9.8e-07   28.7   0.0     2    95     7   106     6   118 0.74 NAD binding domain of 6-phosphogluconate dehydrogenase
UDPG_MGDP_dh_N       PF03721.9    185 sp|O32080|KTRA_BACSU -            222   1.5e-05   24.4   0.1   1   1   3.3e-08   2.5e-05   23.7   0.1     3    41     9    47     7    86 0.90 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain
2-Hacid_dh_C         PF02826.14   178 sp|O32080|KTRA_BACSU -            222   9.5e-05   21.6   0.1   1   1     2e-07   0.00015   20.9   0.1    33    83     3    52     1    71 0.78 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain
F420_oxidored        PF03807.12    96 sp|O32080|KTRA_BACSU -            222   0.00012   22.4   0.3   1   1   5.2e-07   0.00038   20.8   0.2     2    54     9    60     8   107 0.71 NADP oxidoreductase coenzyme F420-dependent
CoA_binding_2        PF13380.1    116 sp|O32080|KTRA_BACSU -            222    0.0004   20.5   0.0   1   1     1e-06   0.00077   19.6   0.0     1    98     7   116     7   131 0.81 CoA binding domain
3HCDH_N              PF02737.13   180 sp|O32080|KTRA_BACSU -            222   0.00049   19.8   0.1   1   1   1.1e-06   0.00078   19.1   0.1     3    44    10    51     8    84 0.85 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain
CPSase_L_chain       PF00289.17   110 sp|O32080|KTRA_BACSU -            222    0.0005   20.1   0.2   1   1   1.6e-06    0.0012   18.9   0.1     3    57     7    60     5    88 0.90 Carbamoyl-phosphate synthase L chain, N-terminal domain
NAD_binding_10       PF13460.1    183 sp|O32080|KTRA_BACSU -            222   0.00073   19.5   0.0   1   1   1.4e-06    0.0011   19.0   0.0     2    80    10    90     9   100 0.86 NADH(P)-binding
ADH_zinc_N           PF00107.21   130 sp|O32080|KTRA_BACSU -            222    0.0011   18.4   0.3   1   2   0.00026      0.19   11.2   0.1     1    67    13    79    13    91 0.75 Zinc-binding dehydrogenase
UPF0146              PF03686.8    127 sp|O32080|KTRA_BACSU -            222    0.0025   17.6   0.1   1   1   9.2e-06    0.0068   16.2   0.1    14    51     6    44     2   112 0.89 Uncharacterised protein family (UPF0146)
AlaDh_PNT_C          PF01262.16   168 sp|O32080|KTRA_BACSU -            222     0.005   16.4   0.1   1   1   9.5e-06    0.0071   15.9   0.1    16    62     2    48     1    88 0.87 Alanine dehydrogenase/PNT, C-terminal domain
ThiF                 PF00899.16   136 sp|O32080|KTRA_BACSU -            222     0.011   15.5   0.9   1   2    0.0002      0.15   11.8   0.2     2    29     6    33     5    42 0.89 ThiF family
ApbA                 PF02558.11   151 sp|O32080|KTRA_BACSU -            222     0.012   15.0   0.1   1   1   2.5e-05     0.019   14.4   0.1     2    75    10    78     9   114 0.80 Ketopantoate reductase PanE/ApbA
Rossmann-like        PF10727.4    127 sp|O32080|KTRA_BACSU -            222     0.013   15.2   0.1   1   2   0.00031      0.23   11.2   0.1    14    76    10    68     3    90 0.72 Rossmann-like domain
NAD_Gly3P_dh_N       PF01210.18   157 sp|O32080|KTRA_BACSU -            222     0.018   14.7   0.1   1   1   6.3e-05     0.047   13.4   0.1     2    38     9    45     8    94 0.78 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus
Shikimate_DH         PF01488.15   135 sp|O32080|KTRA_BACSU -            222     0.036   14.1   0.2   1   1   7.8e-05     0.057   13.5   0.2     9    88     3    83     1   121 0.77 Shikimate / quinate 5-dehydrogenase
DUF1625              PF07787.7    248 sp|O32080|KTRA_BACSU -            222     0.066   12.4   0.1   1   1   0.00017      0.13   11.5   0.0   163   209    45    91    30    97 0.89 Protein of unknown function (DUF1625)
XdhC_C               PF13478.1    136 sp|O32080|KTRA_BACSU -            222     0.089   13.1   0.0   1   1   0.00021      0.15   12.3   0.0     2    80    10    96     9   133 0.74 XdhC Rossmann domain
TrkH                 PF02386.11   354 sp|O32081|KTRB_BACSU -            445     6e-88  294.7  47.6   1   2   2.9e-07    0.0043   15.6   7.3   268   352    19   101     4   103 0.85 Cation transport protein
TrkH                 PF02386.11   354 sp|O32081|KTRB_BACSU -            445     6e-88  294.7  47.6   2   2     3e-89   4.4e-85  285.3  32.4     2   353   118   431   117   432 0.98 Cation transport protein
TrkA_N               PF02254.13   116 sp|P39760|KTRC_BACSU -            221   1.7e-29  102.1   1.2   1   1   1.9e-32   1.7e-29  102.1   1.2     1   116     5   120     5   120 0.96 TrkA-N domain
TrkA_C               PF02080.16    71 sp|P39760|KTRC_BACSU -            221   1.3e-15   56.6   2.4   1   1   1.7e-18   1.6e-15   56.4   0.9     4    69   150   216   148   218 0.96 TrkA-C domain
NAD_binding_2        PF03446.10   163 sp|P39760|KTRC_BACSU -            221   9.9e-07   28.7   1.0   1   1   1.4e-09   1.3e-06   28.3   0.3     2    94     3   101     2   114 0.80 NAD binding domain of 6-phosphogluconate dehydrogenase
UDPG_MGDP_dh_N       PF03721.9    185 sp|P39760|KTRC_BACSU -            221     2e-05   24.0   0.9   1   2     7e-08   6.5e-05   22.3   0.1     4    45     6    47     3    73 0.82 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain
ADH_zinc_N           PF00107.21   130 sp|P39760|KTRC_BACSU -            221   2.6e-05   23.7   0.9   1   2   0.00011     0.098   12.2   0.2     1    72     9    78     9    86 0.84 Zinc-binding dehydrogenase
ADH_zinc_N           PF00107.21   130 sp|P39760|KTRC_BACSU -            221   2.6e-05   23.7   0.9   2   2   0.00032       0.3   10.6   0.0     6    51    84   129    81   153 0.83 Zinc-binding dehydrogenase
CPSase_L_chain       PF00289.17   110 sp|P39760|KTRC_BACSU -            221   5.2e-05   23.3   0.3   1   2   1.8e-06    0.0016   18.4   0.0     2    52     2    52     1    62 0.90 Carbamoyl-phosphate synthase L chain, N-terminal domain
F420_oxidored        PF03807.12    96 sp|P39760|KTRC_BACSU -            221   0.00017   21.9   1.8   1   1   3.6e-07   0.00034   20.9   0.2     2    60     5    59     4    96 0.85 NADP oxidoreductase coenzyme F420-dependent
3HCDH_N              PF02737.13   180 sp|P39760|KTRC_BACSU -            221   0.00034   20.3   0.5   1   1   9.3e-07   0.00086   19.0   0.2     3    42     6    45     4    80 0.88 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain
UPF0146              PF03686.8    127 sp|P39760|KTRC_BACSU -            221    0.0013   18.5   3.5   1   3   6.3e-06    0.0058   16.4   0.1    19    56     7    45     1    58 0.82 Uncharacterised protein family (UPF0146)
ThiF                 PF00899.16   136 sp|P39760|KTRC_BACSU -            221    0.0088   15.8   3.5   1   3   0.00012      0.11   12.3   0.1     3    38     3    39     1    42 0.89 ThiF family
NAD_Gly3P_dh_N       PF01210.18   157 sp|P39760|KTRC_BACSU -            221     0.009   15.7   0.2   1   1   2.5e-05     0.023   14.4   0.0     2    37     5    40     4    87 0.92 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus
2-Hacid_dh_C         PF02826.14   178 sp|P39760|KTRC_BACSU -            221    0.0094   15.1   0.0   1   1   2.3e-05     0.021   13.9   0.0    37    75     3    41     1    58 0.83 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain
ApbA                 PF02558.11   151 sp|P39760|KTRC_BACSU -            221     0.021   14.2   0.8   1   1   3.5e-05     0.032   13.6   0.3     2   102     6   102     5   119 0.82 Ketopantoate reductase PanE/ApbA
NmrA                 PF05368.8    233 sp|P39760|KTRC_BACSU -            221     0.034   13.4   0.7   1   2   8.9e-05     0.082   12.1   0.1     7    77    10    79     6    97 0.84 NmrA-like family
IlvN                 PF07991.7    165 sp|P39760|KTRC_BACSU -            221     0.054   12.8   0.2   1   1   0.00011      0.11   11.9   0.2     4    85     2    91     1   101 0.73 Acetohydroxy acid isomeroreductase, catalytic domain
Shikimate_DH         PF01488.15   135 sp|P39760|KTRC_BACSU -            221     0.077   13.1   1.6   1   2   0.00036      0.34   11.0   0.1    13    56     3    45     1    98 0.77 Shikimate / quinate 5-dehydrogenase
TrkH                 PF02386.11   354 sp|O31658|KTRD_BACSU -            449     5e-84  281.8  41.4   1   2   2.1e-06     0.031   12.8   5.9   264   348    11    97     4   106 0.76 Cation transport protein
TrkH                 PF02386.11   354 sp|O31658|KTRD_BACSU -            449     5e-84  281.8  41.4   2   2   3.6e-86   5.3e-82  275.2  27.5     3   352   119   433   117   435 0.98 Cation transport protein
Ku                   PF02735.11   200 sp|O34859|KU_BACSU   -            311   3.8e-44  150.4   0.2   1   1   3.4e-48   5.1e-44  150.0   0.2     1   200    26   210    26   210 0.98 Ku70/Ku80 beta-barrel domain
AMP-binding          PF00501.23   417 sp|P94547|LCFA_BACSU -            560  1.6e-107  359.4   0.0   1   1  2.6e-111  1.9e-107  359.2   0.0     3   415    32   458    30   460 0.88 AMP-binding enzyme
AMP-binding_C        PF13193.1     73 sp|P94547|LCFA_BACSU -            560   2.7e-18   66.6   1.0   1   1   7.7e-22   5.7e-18   65.6   1.0     1    73   468   543   468   543 0.94 AMP-binding enzyme C-terminal domain
AMP-binding          PF00501.23   417 sp|O07610|LCFB_BACSU -            513  2.8e-116  388.3   0.0   1   1  6.7e-120  3.3e-116  388.0   0.0     2   416     8   418     7   419 0.83 AMP-binding enzyme
AMP-binding_C        PF13193.1     73 sp|O07610|LCFB_BACSU -            513   3.4e-21   75.9   0.3   1   1   1.7e-24   8.2e-21   74.7   0.3     1    73   427   501   427   501 0.96 AMP-binding enzyme C-terminal domain
AMP-binding_C_2      PF14535.1     96 sp|O07610|LCFB_BACSU -            513     0.039   13.9   0.1   1   1   1.9e-05     0.093   12.7   0.1     1    44   420   463   420   484 0.75 AMP-binding enzyme C-terminal domain
Lactate_perm         PF02652.9    522 sp|P55910|LCTP_BACSU -            541  3.8e-218  725.2  40.5   1   1  5.8e-222  4.3e-218  725.0  40.5     1   521    14   535    14   536 1.00 L-lactate permease
DUF2516              PF10724.4    100 sp|P55910|LCTP_BACSU -            541     0.053   13.5   0.6   3   3   7.2e-06     0.053   13.5   0.6    18    70   369   422   354   432 0.79 Protein of unknown function (DUF2516)
Peptidase_S66        PF02016.10   284 sp|O34851|LDC_BACSU  -            319   3.6e-92  308.3   0.0   1   1   2.8e-96   4.1e-92  308.1   0.0     1   283    20   299    20   300 0.99 LD-carboxypeptidase
Ldh_1_C              PF02866.13   174 sp|P13714|LDH_BACSU  -            320   1.6e-54  184.2   0.0   1   1   1.3e-57   2.2e-54  183.8   0.0     1   173   148   316   148   317 0.99 lactate/malate dehydrogenase, alpha/beta C-terminal domain
Ldh_1_N              PF00056.18   141 sp|P13714|LDH_BACSU  -            320   1.3e-52  177.3   0.0   1   1   1.5e-55   2.4e-52  176.5   0.0     1   141     6   145     6   145 0.99 lactate/malate dehydrogenase, NAD binding domain
UDPG_MGDP_dh_N       PF03721.9    185 sp|P13714|LDH_BACSU  -            320   2.3e-05   23.8   1.3   1   2   6.6e-07    0.0011   18.4   0.3     2    36     7    43     6   110 0.70 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain
OCD_Mu_crystall      PF02423.10   314 sp|P13714|LDH_BACSU  -            320     0.026   13.3   0.0   1   1   2.2e-05     0.036   12.8   0.0   127   205     3    85     1    97 0.84 Ornithine cyclodeaminase/mu-crystallin family
ThiF                 PF00899.16   136 sp|P13714|LDH_BACSU  -            320      0.03   14.1   0.0   1   1     5e-05     0.083   12.7   0.0     4    33     7    37     4    42 0.91 ThiF family
3HCDH_N              PF02737.13   180 sp|P13714|LDH_BACSU  -            320     0.036   13.7   0.1   1   1   4.2e-05     0.069   12.7   0.1     1    35     7    43     7    69 0.84 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain
F420_oxidored        PF03807.12    96 sp|P13714|LDH_BACSU  -            320     0.065   13.6   0.0   1   1   9.2e-05      0.15   12.4   0.0     1    67     7    79     7    87 0.68 NADP oxidoreductase coenzyme F420-dependent
GFO_IDH_MocA         PF01408.17   120 sp|P13714|LDH_BACSU  -            320     0.078   13.4   0.0   1   1    0.0002      0.33   11.4   0.0     2    91     7   107     6   108 0.68 Oxidoreductase family, NAD-binding Rossmann fold
NAD_binding_7        PF13241.1    103 sp|P13714|LDH_BACSU  -            320       0.1   12.8   0.1   1   1   0.00014      0.23   11.7   0.1     9    70     7    83     2   101 0.71 Putative NAD(P)-binding
DiS_P_DiS            PF06750.8     92 sp|P15378|LEP4_BACSU -            248   2.5e-27   94.5   2.4   1   1   1.1e-30   5.4e-27   93.4   2.4     1    91     7    91     7    92 0.98 Bacterial Peptidase A24 N-terminal domain
Peptidase_A24        PF01478.13   106 sp|P15378|LEP4_BACSU -            248   4.5e-15   55.7  20.2   1   1   9.1e-19   4.5e-15   55.7  20.2     2   105   101   203   100   204 0.96 Type IV leader peptidase family
DNA_RNApol_7kD       PF03604.8     32 sp|P15378|LEP4_BACSU -            248      0.13   11.7   0.9   1   1   6.1e-05       0.3   10.5   0.9    19    27    60    68    58    70 0.92 DNA directed RNA polymerase, 7 kDa subunit
LepA_C               PF06421.7    108 sp|P37949|LEPA_BACSU -            612   6.9e-54  180.3   3.0   1   1   1.3e-56   1.8e-53  179.0   3.0     1   108   498   605   498   605 0.99 GTP-binding protein LepA C-terminus
GTP_EFTU             PF00009.22   188 sp|P37949|LEPA_BACSU -            612   1.6e-52  177.7   0.1   1   1     2e-55   2.7e-52  176.9   0.1     2   187    13   191    12   192 0.94 Elongation factor Tu GTP binding domain
EFG_C                PF00679.19    89 sp|P37949|LEPA_BACSU -            612   1.7e-24   85.4   0.0   1   1   2.9e-27     4e-24   84.3   0.0     2    88   409   496   408   497 0.96 Elongation factor G C-terminus
GTP_EFTU_D2          PF03144.20    74 sp|P37949|LEPA_BACSU -            612   4.8e-10   39.4   2.7   1   1   8.7e-13   1.2e-09   38.1   2.7     1    74   215   285   215   285 0.95 Elongation factor Tu domain 2
EFG_II               PF14492.1     75 sp|P37949|LEPA_BACSU -            612   2.5e-06   27.2   0.0   1   1   4.5e-09   6.1e-06   25.9   0.0     3    73   302   375   302   377 0.89 Elongation Factor G, domain II
MMR_HSR1             PF01926.18   116 sp|P37949|LEPA_BACSU -            612     5e-06   26.4   0.0   1   1     1e-08   1.4e-05   25.0   0.0     8   116    23   142    16   142 0.65 50S ribosome-binding GTPase
Ras                  PF00071.17   162 sp|P37949|LEPA_BACSU -            612    0.0014   18.0   0.1   1   2   3.9e-06    0.0053   16.1   0.0    30   160    62   190    39   192 0.79 Ras family
SRPRB                PF09439.5    181 sp|P37949|LEPA_BACSU -            612    0.0015   17.7   0.1   1   1   6.5e-06    0.0087   15.2   0.1    34    93    64   121    12   163 0.67 Signal recognition particle receptor beta subunit
PduV-EutP            PF10662.4    143 sp|P37949|LEPA_BACSU -            612    0.0082   15.6   0.1   1   1   1.9e-05     0.026   14.0   0.1    19   141    64   186    60   188 0.72 Ethanolamine utilisation - propanediol utilisation
Miro                 PF08477.8    119 sp|P37949|LEPA_BACSU -            612    0.0089   16.5   0.1   1   1   2.9e-05     0.039   14.4   0.0     9   100    24   131    16   144 0.71 Miro-like protein
DUF2190              PF09956.4    106 sp|P37949|LEPA_BACSU -            612     0.034   13.9   0.3   1   1   5.6e-05     0.075   12.8   0.3    36    99   234   292   222   295 0.85 Uncharacterized conserved protein (DUF2190)
Peptidase_S24        PF00717.18    70 sp|P28628|LEPS_BACSU -            184   1.7e-18   66.0   2.0   1   1   4.6e-22   3.4e-18   65.0   2.0     2    70    39   105    38   105 0.92 Peptidase S24-like
Peptidase_S26        PF10502.4    138 sp|P28628|LEPS_BACSU -            184   9.6e-09   34.8   0.0   1   1   1.8e-12   1.3e-08   34.4   0.0    50   135    79   172    49   175 0.80 Signal peptidase, peptidase S26
Peptidase_S24        PF00717.18    70 sp|P71013|LEPT_BACSU -            193   3.4e-20   71.4   0.3   1   1   1.2e-23   5.8e-20   70.7   0.3     2    70    47   115    46   115 0.97 Peptidase S24-like
Peptidase_S26        PF10502.4    138 sp|P71013|LEPT_BACSU -            193   5.1e-08   32.5   0.0   1   1   1.5e-11   7.5e-08   31.9   0.0    50   136    89   182    65   184 0.84 Signal peptidase, peptidase S26
AMP-binding          PF00501.23   417 sp|P71013|LEPT_BACSU -            193     0.068   11.5   0.1   1   1   1.7e-05     0.085   11.2   0.1   356   408    96   154    51   156 0.78 AMP-binding enzyme
Peptidase_S24        PF00717.18    70 sp|P42959|LEPU_BACSU -            187   1.1e-17   63.3   0.1   1   1   5.5e-21     2e-17   62.5   0.1     2    70    42   110    41   110 0.97 Peptidase S24-like
Peptidase_S26        PF10502.4    138 sp|P42959|LEPU_BACSU -            187   6.4e-06   25.7   0.0   1   1   2.5e-09   9.2e-06   25.2   0.0    49   134    83   174    66   178 0.81 Signal peptidase, peptidase S26
PUA                  PF01472.15    74 sp|P42959|LEPU_BACSU -            187     0.051   13.3   0.0   1   1   2.5e-05     0.092   12.4   0.0    16    46    54    85    43   100 0.83 PUA domain
Peptidase_S24        PF00717.18    70 sp|O07560|LEPV_BACSU -            168   3.5e-18   65.0   0.1   1   1   7.9e-22   5.8e-18   64.2   0.1     1    70    29    97    29    97 0.96 Peptidase S24-like
Peptidase_S26        PF10502.4    138 sp|O07560|LEPV_BACSU -            168   3.8e-14   52.3   0.1   1   1   1.6e-17   1.2e-13   50.8   0.1    49   134    70   165    52   167 0.81 Signal peptidase, peptidase S26
Peptidase_S24        PF00717.18    70 sp|P54506|LEPW_BACSU -            190   1.3e-08   34.3   0.0   1   1   1.1e-11   3.2e-08   33.0   0.0     2    57    43   102    42   113 0.87 Peptidase S24-like
ABC_membrane         PF00664.18   275 sp|P54506|LEPW_BACSU -            190     0.019   14.3   1.6   2   2   0.00021      0.61    9.4   0.0   125   175   127   176   117   179 0.87 ABC transporter transmembrane region
SpoA                 PF01052.15    77 sp|P54506|LEPW_BACSU -            190     0.072   12.6   0.0   1   1   4.1e-05      0.12   11.9   0.0    23    50    63    90    60   103 0.83 Surface presentation of antigens (SPOA)
DUF1206              PF06724.6     73 sp|P54506|LEPW_BACSU -            190      0.28   10.9   2.0   2   2   8.3e-05      0.25   11.1   0.3    40    71   139   171   133   173 0.84 Domain of Unknown Function (DUF1206)
HMGL-like            PF00682.14   237 sp|P94565|LEU1_BACSU -            518   2.1e-84  282.8   0.7   1   1   6.6e-88   3.2e-84  282.2   0.7     1   236    12   250    12   251 0.99 HMGL-like
LeuA_dimer           PF08502.5    133 sp|P94565|LEU1_BACSU -            518   3.9e-36  123.7   0.8   1   1   1.9e-39   9.5e-36  122.5   0.8     1   132   368   500   368   501 0.95 LeuA allosteric (dimerisation) domain
UBN2_2               PF14227.1    120 sp|P94565|LEU1_BACSU -            518     0.034   13.6   0.3   1   1   2.2e-05      0.11   12.0   0.3    43    73   350   380   336   386 0.94 gag-polypeptide of LTR copia-type
Iso_dh               PF00180.15   348 sp|P05645|LEU3_BACSU -            365  4.4e-149  496.1   0.0   1   1  3.6e-153  5.4e-149  495.8   0.0     1   348     4   352     4   352 0.99 Isocitrate/isopropylmalate dehydrogenase
Aconitase            PF00330.15   465 sp|P80858|LEUC_BACSU -            472  4.1e-171  569.5   0.1   1   1  6.2e-175  4.6e-171  569.3   0.1     1   465     5   457     5   457 0.99 Aconitase family (aconitate hydratase)
DUF521               PF04412.8    400 sp|P80858|LEUC_BACSU -            472      0.01   14.4   0.3   1   2   2.4e-06     0.018   13.6   0.0   281   362   333   413   302   429 0.76 Protein of unknown function (DUF521)
Aconitase_C          PF00694.14   131 sp|P94568|LEUD_BACSU -            199   3.4e-38  130.7   0.0   1   2     4e-42   5.9e-38  129.9   0.0     1   129     1   122     1   124 0.95 Aconitase C-terminal domain
Glyco_hydro_32N      PF00251.15   308 sp|O07003|LEVB_BACSU -            516   8.1e-81  271.7  14.1   1   1   1.4e-84   1.1e-80  271.3  14.1     1   308    48   356    48   356 0.91 Glycosyl hydrolases family 32 N-terminal domain
Glyco_hydro_32C      PF08244.7     86 sp|O07003|LEVB_BACSU -            516   7.1e-09   35.9   0.0   1   1   2.6e-12     2e-08   34.5   0.0     2    86   393   475   391   475 0.90 Glycosyl hydrolases family 32 C terminal
Sigma54_activat      PF00158.21   168 sp|P23914|LEVR_BACSU -            935   4.1e-48  163.0   0.0   1   1   2.2e-50   1.4e-47  161.2   0.0     1   156   114   280   114   288 0.93 Sigma-54 interaction domain
PRD                  PF00874.15    89 sp|P23914|LEVR_BACSU -            935   3.3e-29  100.8  15.1   1   2   3.7e-17   2.4e-14   53.2   5.0     2    88   479   565   478   566 0.96 PRD domain
PRD                  PF00874.15    89 sp|P23914|LEVR_BACSU -            935   3.3e-29  100.8  15.1   2   2   6.3e-17   4.1e-14   52.4   0.9     3    87   843   927   841   929 0.96 PRD domain
EIIA-man             PF03610.11   116 sp|P23914|LEVR_BACSU -            935   2.7e-12   46.7   1.8   1   1   1.1e-14   7.2e-12   45.4   1.8     1   105   576   680   576   691 0.90 PTS system fructose IIA component
AAA                  PF00004.24   132 sp|P23914|LEVR_BACSU -            935   7.6e-11   42.3   0.0   1   1   7.8e-13     5e-10   39.6   0.0     1   131   141   288   141   289 0.84 ATPase family associated with various cellular activities (AAA)
AAA_5                PF07728.9    139 sp|P23914|LEVR_BACSU -            935   2.2e-08   33.9   0.0   1   2   1.1e-09   7.1e-07   29.0   0.0     1   138   140   280   140   281 0.81 AAA domain (dynein-related subfamily)
Mg_chelatase         PF01078.16   207 sp|P23914|LEVR_BACSU -            935   2.3e-06   26.9   0.4   1   1   9.7e-08   6.3e-05   22.2   0.1    11   134   128   244   121   277 0.71 Magnesium chelatase, subunit ChlI
AAA_2                PF07724.9    171 sp|P23914|LEVR_BACSU -            935   6.6e-06   26.1   0.0   1   1   8.8e-08   5.6e-05   23.1   0.0     6   128   141   266   138   280 0.82 AAA domain (Cdc48 subfamily)
Sigma54_activ_2      PF14532.1    138 sp|P23914|LEVR_BACSU -            935   7.6e-06   26.0   0.0   1   1   2.8e-07   0.00018   21.5   0.0    22   138   139   290   116   290 0.82 Sigma-54 interaction domain
AAA_22               PF13401.1    131 sp|P23914|LEVR_BACSU -            935     2e-05   24.7   0.0   1   1   3.3e-07   0.00021   21.4   0.0     5   107   139   238   137   268 0.75 AAA domain
AAA_16               PF13191.1    185 sp|P23914|LEVR_BACSU -            935   9.5e-05   22.4   0.0   1   1   1.4e-06   0.00088   19.3   0.0     9    74   125   193   121   208 0.73 AAA ATPase domain
AAA_14               PF13173.1    128 sp|P23914|LEVR_BACSU -            935   0.00029   20.7   0.2   1   2   2.9e-05     0.019   14.8   0.0     5    87   141   243   137   256 0.70 AAA domain
RuvB_N               PF05496.7    234 sp|P23914|LEVR_BACSU -            935   0.00037   19.6   0.0   2   2   2.5e-05     0.016   14.2   0.0    93   125   209   240   198   312 0.80 Holliday junction DNA helicase ruvB N-terminus
TrmB                 PF01978.14    68 sp|P23914|LEVR_BACSU -            935    0.0015   18.1   1.8   1   1   7.8e-06     0.005   16.5   0.1    17    66    23    72    19    74 0.93 Sugar-specific transcriptional regulator TrmB
FtsK_SpoIIIE         PF01580.13   205 sp|P23914|LEVR_BACSU -            935    0.0086   15.5   0.0   1   1   3.6e-05     0.023   14.1   0.0    24    58   123   158    98   189 0.74 FtsK/SpoIIIE family
AAA_10               PF12846.2    304 sp|P23914|LEVR_BACSU -            935    0.0097   15.3   0.1   1   1   7.9e-05     0.051   13.0   0.0     3    25   140   162   138   190 0.88 AAA-like domain
NACHT                PF05729.7    166 sp|P23914|LEVR_BACSU -            935     0.012   15.2   0.0   1   1   7.4e-05     0.048   13.3   0.0     3   100   141   265   139   299 0.67 NACHT domain
GerE                 PF00196.14    58 sp|P23914|LEVR_BACSU -            935     0.026   13.8   1.6   1   2   0.00019      0.12   11.6   0.1    16    44    26    54    23    56 0.92 Bacterial regulatory proteins, luxR family
AAA_29               PF13555.1     62 sp|P23914|LEVR_BACSU -            935     0.051   13.1   0.6   2   2   0.00072      0.46   10.0   0.1    21    37   136   152   127   156 0.85 P-loop containing region of AAA domain
DUF87                PF01935.12   229 sp|P23914|LEVR_BACSU -            935     0.072   12.8  14.1   2   3   0.00062       0.4   10.4   0.0    25    45   140   160   137   176 0.88 Domain of unknown function DUF87
HTH_20               PF12840.2     61 sp|P23914|LEVR_BACSU -            935     0.089   12.6   0.0   1   1   0.00037      0.24   11.2   0.0    18    50    22    54    20    61 0.86 Helix-turn-helix domain
T2SE                 PF00437.15   272 sp|P23914|LEVR_BACSU -            935      0.14   11.0   0.0   1   1   0.00021      0.14   11.0   0.0    34   150    19   160     4   167 0.68 Type II/IV secretion system protein
MarR_2               PF12802.2     62 sp|P23914|LEVR_BACSU -            935      0.15   11.7   0.0   1   1   0.00097      0.63    9.7   0.0    19    47    28    54    18    61 0.84 MarR family
LexA_DNA_bind        PF01726.11    65 sp|P31080|LEXA_BACSU -            205   3.7e-29  100.0   0.1   1   1   4.8e-32   5.5e-29   99.5   0.1     1    65     1    65     1    65 0.99 LexA DNA binding domain
Peptidase_S24        PF00717.18    70 sp|P31080|LEXA_BACSU -            205   4.8e-17   61.3   0.4   1   1   6.3e-20   7.2e-17   60.8   0.4     2    67   123   188   122   191 0.94 Peptidase S24-like
HTH_24               PF13412.1     48 sp|P31080|LEXA_BACSU -            205   2.9e-06   26.5   0.0   1   1   7.5e-09   8.5e-06   25.0   0.0     1    48     4    57     4    57 0.93 Winged helix-turn-helix DNA-binding
HTH_IclR             PF09339.5     52 sp|P31080|LEXA_BACSU -            205   3.3e-05   23.3   0.0   1   1   6.1e-08     7e-05   22.3   0.0     4    52     7    60     6    60 0.86 IclR helix-turn-helix domain
MarR_2               PF12802.2     62 sp|P31080|LEXA_BACSU -            205   6.1e-05   22.6   0.0   1   1   8.6e-08   9.8e-05   21.9   0.0     3    55     4    60     2    65 0.88 MarR family
MarR                 PF01047.17    59 sp|P31080|LEXA_BACSU -            205   0.00066   19.3   0.0   1   1   1.9e-06    0.0022   17.6   0.0    17    51    25    60     4    62 0.81 MarR family
TrmB                 PF01978.14    68 sp|P31080|LEXA_BACSU -            205    0.0012   18.5   0.0   1   2   5.7e-06    0.0065   16.1   0.0    24    64    27    68    24    72 0.86 Sugar-specific transcriptional regulator TrmB
HTH_20               PF12840.2     61 sp|P31080|LEXA_BACSU -            205    0.0048   16.6   0.0   1   1   1.4e-05     0.016   15.0   0.0    11    58     7    60     4    63 0.88 Helix-turn-helix domain
HTH_11               PF08279.7     55 sp|P31080|LEXA_BACSU -            205    0.0089   15.6   0.0   1   1   1.6e-05     0.019   14.6   0.0     1    43     7    54     7    62 0.82 HTH domain
DUF1894              PF08979.6     89 sp|P31080|LEXA_BACSU -            205     0.046   13.7   0.0   1   1   7.7e-05     0.088   12.8   0.0    34    85   111   165    98   169 0.83 Domain of unknown function (DUF1894)
HTH_Crp_2            PF13545.1     76 sp|P31080|LEXA_BACSU -            205     0.077   12.7   0.0   1   1   0.00011      0.13   12.0   0.0    28    71    25    72    10    73 0.85 Crp-like helix-turn-helix domain
DUF3534              PF12053.3    145 sp|P31080|LEXA_BACSU -            205     0.086   12.7   0.2   1   1   0.00012      0.13   12.0   0.2    53    87   128   165   108   182 0.78 Domain of unknown function (DUF3534)
KfrA_N               PF11740.3    120 sp|P31080|LEXA_BACSU -            205      0.18   12.2   0.0   1   1   0.00025      0.29   11.5   0.0    12    47    18    53    10    77 0.83 Plasmid replication region DNA-binding N-term
LGT                  PF01790.13   256 sp|O34752|LGT_BACSU  -            269   1.7e-82  276.2  17.6   1   1   2.5e-86   1.9e-82  276.0  17.6     1   255     8   257     8   258 0.92 Prolipoprotein diacylglyceryl transferase
PspA_IM30            PF04012.7    221 sp|O32201|LIAH_BACSU -            225   4.3e-67  225.7  31.7   1   1   2.9e-70   4.9e-67  225.5  31.7     1   221     1   221     1   221 0.99 PspA/IM30 family
SlyX                 PF04102.7     69 sp|O32201|LIAH_BACSU -            225     0.041   14.2  10.5   2   3   0.00013      0.22   11.9   2.9     8    61    95   148    90   152 0.82 SlyX
Spc7                 PF08317.6    326 sp|O32201|LIAH_BACSU -            225      0.11   11.1  18.0   1   1   8.6e-05      0.14   10.7  17.6   147   289    21   171    18   215 0.84 Spc7 kinetochore protein
CCDC32               PF14989.1    148 sp|O32201|LIAH_BACSU -            225      0.13   12.0   7.1   1   1   4.2e-05      0.07   12.9   4.5    39   120   102   179    79   189 0.81 Coiled-coil domain containing 32
Viral_P18            PF04521.8    120 sp|O32201|LIAH_BACSU -            225      0.19   11.1   7.7   1   1   0.00011      0.18   11.2   6.0    50   117    90   157    72   160 0.78 ssRNA positive strand viral 18kD cysteine rich protein
Allexi_40kDa         PF05549.6    271 sp|O32201|LIAH_BACSU -            225       1.3    8.2   5.6   2   3   0.00048      0.79    8.9   1.9    75   155   109   156    69   172 0.57 Allexivirus 40kDa protein
Allexi_40kDa         PF05549.6    271 sp|O32201|LIAH_BACSU -            225       1.3    8.2   5.6   3   3    0.0004      0.66    9.2   2.4    75   134   109   167   102   211 0.63 Allexivirus 40kDa protein
Glyco_hydro_4        PF02056.11   183 sp|P46320|LICH_BACSU -            442   9.2e-77  256.4   0.0   1   1     3e-80   1.5e-76  255.8   0.0     1   182     6   187     6   188 0.99 Family 4 glycosyl hydrolase
Glyco_hydro_4C       PF11975.3    232 sp|P46320|LICH_BACSU -            442   4.5e-75  252.4   0.0   1   1   1.2e-78   6.2e-75  251.9   0.0     1   232   191   412   191   412 0.99 Family 4 glycosyl hydrolase C-terminal domain
Ldh_1_N              PF00056.18   141 sp|P46320|LICH_BACSU -            442     0.013   15.2   0.0   2   2   1.6e-05     0.081   12.7   0.0    96   136   127   167   122   170 0.91 lactate/malate dehydrogenase, NAD binding domain
PRD                  PF00874.15    89 sp|P46321|LICR_BACSU -            641   3.2e-38  129.7   4.3   1   2   1.2e-18   1.4e-15   57.1   1.5    12    88   205   281   187   282 0.90 PRD domain
PRD                  PF00874.15    89 sp|P46321|LICR_BACSU -            641   3.2e-38  129.7   4.3   2   2   1.4e-23   1.8e-20   72.8   0.1     3    89   308   396   306   396 0.97 PRD domain
PTS_EIIA_2           PF00359.17   144 sp|P46321|LICR_BACSU -            641   7.8e-33  113.2   0.0   1   1   1.3e-35   1.6e-32  112.2   0.0     2   143   500   637   499   638 0.96 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2
HTH_11               PF08279.7     55 sp|P46321|LICR_BACSU -            641   1.1e-21   76.1   0.1   1   2   5.8e-17   7.2e-14   51.1   0.0     1    55     5    63     5    63 0.98 HTH domain
HTH_11               PF08279.7     55 sp|P46321|LICR_BACSU -            641   1.1e-21   76.1   0.1   2   2   5.1e-08   6.3e-05   22.5   0.0     3    53    95   149    93   151 0.86 HTH domain
Mga                  PF05043.8     87 sp|P46321|LICR_BACSU -            641   7.4e-18   64.6   0.2   2   2   1.8e-19   2.2e-16   59.8   0.2    15    86    82   166    68   167 0.87 Mga helix-turn-helix domain
HTH_Mga              PF08280.6     59 sp|P46321|LICR_BACSU -            641     2e-07   30.6   0.5   1   2    0.0007      0.86    9.4   0.0    25    44    25    44     9    50 0.89 M protein trans-acting positive regulator (MGA) HTH domain
HTH_Mga              PF08280.6     59 sp|P46321|LICR_BACSU -            641     2e-07   30.6   0.5   2   2     1e-06    0.0013   18.4   0.4     9    44    96   132    92   142 0.86 M protein trans-acting positive regulator (MGA) HTH domain
HTH_DeoR             PF08220.7     57 sp|P46321|LICR_BACSU -            641   1.2e-06   27.8   0.3   1   2   2.3e-05     0.028   13.9   0.0    21    39    26    44     5    52 0.83 DeoR-like helix-turn-helix domain
HTH_DeoR             PF08220.7     57 sp|P46321|LICR_BACSU -            641   1.2e-06   27.8   0.3   2   2   0.00014      0.17   11.4   0.1     7    40   100   133    95   140 0.88 DeoR-like helix-turn-helix domain
PTS_IIB              PF02302.12    90 sp|P46321|LICR_BACSU -            641   6.9e-05   23.2   0.0   1   1   2.7e-07   0.00033   21.0   0.0     2    82   409   481   408   492 0.79 PTS system, Lactose/Cellobiose specific IIB subunit
HTH_20               PF12840.2     61 sp|P46321|LICR_BACSU -            641    0.0024   17.6   0.3   1   2   1.8e-05     0.022   14.5   0.1    13    49     7    44     1    47 0.94 Helix-turn-helix domain
HTH_10               PF04967.7     53 sp|P46321|LICR_BACSU -            641    0.0082   15.6   0.6   1   1   1.9e-05     0.024   14.2   0.0    24    52   108   136   104   137 0.91 HTH DNA binding domain
PRD                  PF00874.15    89 sp|P39805|LICT_BACSU -            277   6.1e-49  164.0  12.4   1   2   4.5e-30   2.2e-26   91.7   0.1     1    89    75   163    75   163 0.98 PRD domain
PRD                  PF00874.15    89 sp|P39805|LICT_BACSU -            277   6.1e-49  164.0  12.4   2   2   1.6e-24   7.9e-21   73.9   8.4     1    88   180   272   180   273 0.97 PRD domain
CAT_RBD              PF03123.10    59 sp|P39805|LICT_BACSU -            277   2.4e-24   84.7   5.4   1   2   5.4e-28   2.6e-24   84.6   4.0     1    59     1    59     1    59 0.99 CAT RNA binding domain
PRD_Mga              PF08270.6    217 sp|P39805|LICT_BACSU -            277     0.022   14.0  14.8   2   3   2.9e-05      0.14   11.3   2.1    46   113   158   223   154   232 0.84 M protein trans-acting positive regulator (MGA) PRD domain
DNA_ligase_A_M       PF01068.16   202 sp|O31917|LIGB_BACSU -            270   6.4e-39  133.4   0.0   1   1   2.4e-42   8.8e-39  132.9   0.0     1   201     5   182     5   183 0.91 ATP dependent DNA ligase domain
mRNA_cap_enzyme      PF01331.14   192 sp|O31917|LIGB_BACSU -            270   6.6e-07   29.1   0.2   1   1   3.2e-09   1.2e-05   25.1   0.1    12   115    14   127     6   177 0.85 mRNA capping enzyme, catalytic domain
LTD                  PF00932.14   116 sp|O31917|LIGB_BACSU -            270     0.062   13.3   0.0   1   1   4.7e-05      0.17   11.9   0.0    16    59   168   211   156   227 0.82 Lamin Tail Domain
DNA_ligase_A_M       PF01068.16   202 sp|O34398|LIGD_BACSU -            611   5.9e-38  130.2   0.0   1   1   1.3e-41   9.8e-38  129.5   0.0    18   202    16   208     4   208 0.93 ATP dependent DNA ligase domain
tRNA-synt_2          PF00152.15   335 sp|O34398|LIGD_BACSU -            611     0.073   11.8   0.1   1   1   1.9e-05      0.14   10.8   0.1   152   246   292   390   270   407 0.69 tRNA synthetases class II (D, K and N)
Radical_SAM          PF04055.16   166 sp|O32129|LIPA_BACSU -            298   7.6e-13   48.9   0.0   1   1   1.6e-16   1.2e-12   48.3   0.0     3   165    63   223    61   224 0.91 Radical SAM superfamily
Lipase_GDSL          PF00657.17   234 sp|P42969|LIPC_BACSU -            213   1.8e-20   73.8   0.0   1   1   3.2e-24   2.4e-20   73.3   0.0     2   234     6   202     5   202 0.84 GDSL-like Lipase/Acylhydrolase
Lipase_GDSL_2        PF13472.1    179 sp|P42969|LIPC_BACSU -            213   4.8e-18   65.9   0.0   1   1   7.4e-22   5.5e-18   65.7   0.0     2   179     7   198     6   198 0.80 GDSL-like Lipase/Acylhydrolase family
BPL_LplA_LipB        PF03099.14   125 sp|P39648|LIPL_BACSU -            281   1.1e-13   51.2   0.0   1   1   1.4e-17   2.1e-13   50.3   0.0    15   123    77   184    52   186 0.90 Biotin/lipoate A/B protein ligase family
BPL_LplA_LipB        PF03099.14   125 sp|P54511|LIPM_BACSU -            278   6.7e-25   87.5   0.0   1   1   6.2e-29   9.2e-25   87.0   0.0     1   125    51   189    51   189 0.96 Biotin/lipoate A/B protein ligase family
MFS_1                PF07690.11   352 sp|O35018|LMRB_BACSU -            479   2.1e-45  154.9  59.6   1   2   1.4e-49   2.1e-45  154.9  59.6     1   351    22   415    22   416 0.86 Major Facilitator Superfamily
Lon_C                PF05362.8    205 sp|P37945|LON1_BACSU -            774   4.6e-99  329.7   2.1   1   1  3.3e-101   1.4e-98  328.2   0.9     1   204   567   770   567   771 0.99 Lon protease (S16) C-terminal proteolytic domain
LON                  PF02190.11   205 sp|P37945|LON1_BACSU -            774   4.1e-42  144.1   0.7   1   1   2.1e-44   8.6e-42  143.1   0.7     2   204     9   199     8   200 0.90 ATP-dependent protease La (LON) domain
AAA                  PF00004.24   132 sp|P37945|LON1_BACSU -            774   4.4e-25   88.4   0.0   1   1   5.3e-27   2.2e-24   86.1   0.0     1   127   350   487   350   492 0.95 ATPase family associated with various cellular activities (AAA)
ChlI                 PF13541.1    121 sp|P37945|LON1_BACSU -            774   1.2e-08   34.5   0.0   1   1   6.1e-11   2.5e-08   33.4   0.0     1   121   611   738   611   738 0.91 Subunit ChlI of Mg-chelatase
AAA_5                PF07728.9    139 sp|P37945|LON1_BACSU -            774   2.6e-08   33.6   0.0   1   1   1.6e-10   6.6e-08   32.3   0.0     2   125   350   474   349   484 0.72 AAA domain (dynein-related subfamily)
RuvB_N               PF05496.7    234 sp|P37945|LON1_BACSU -            774     1e-06   27.9   0.0   1   2   1.6e-06   0.00065   18.8   0.0    24    79   320   376   301   392 0.76 Holliday junction DNA helicase ruvB N-terminus
AAA_16               PF13191.1    185 sp|P37945|LON1_BACSU -            774   1.3e-06   28.5   1.7   1   1   1.2e-08   5.1e-06   26.6   0.1     2    58   322   378   321   405 0.81 AAA ATPase domain
AAA_2                PF07724.9    171 sp|P37945|LON1_BACSU -            774     2e-06   27.8   0.4   1   1   2.2e-08   9.1e-06   25.6   0.0     8   130   352   473   348   511 0.85 AAA domain (Cdc48 subfamily)
AAA_17               PF13207.1    121 sp|P37945|LON1_BACSU -            774   3.9e-06   27.6   0.9   1   1   8.7e-08   3.6e-05   24.5   0.0     1    38   349   387   349   468 0.80 AAA domain
AAA_3                PF07726.6    131 sp|P37945|LON1_BACSU -            774   1.5e-05   24.6   0.0   1   1   3.1e-07   0.00013   21.5   0.0     4   112   352   472   349   479 0.72 ATPase family associated with various cellular activities (AAA)
AAA_PrkA             PF08298.6    358 sp|P37945|LON1_BACSU -            774   6.2e-05   21.8   0.0   1   1     3e-07   0.00012   20.8   0.0    59   114   318   373   308   386 0.90 PrkA AAA domain
AAA_14               PF13173.1    128 sp|P37945|LON1_BACSU -            774   0.00013   21.8   0.0   1   1   1.2e-06   0.00049   19.9   0.0     2    74   347   427   346   492 0.72 AAA domain
Zeta_toxin           PF06414.7    201 sp|P37945|LON1_BACSU -            774   0.00041   19.4   0.0   1   1   2.8e-06    0.0012   18.0   0.0    18    50   349   380   334   394 0.83 Zeta toxin
DUF258               PF03193.11   161 sp|P37945|LON1_BACSU -            774   0.00058   19.0   0.0   1   1   3.1e-06    0.0013   17.9   0.0    24    67   336   379   319   398 0.82 Protein of unknown function, DUF258
AAA_22               PF13401.1    131 sp|P37945|LON1_BACSU -            774     0.001   19.2   3.9   1   1   4.7e-06    0.0019   18.3   0.0     5   100   348   427   339   470 0.77 AAA domain
AAA_10               PF12846.2    304 sp|P37945|LON1_BACSU -            774    0.0014   18.1   3.2   2   2   0.00015      0.06   12.7   0.0     3    67   349   422   347   475 0.81 AAA-like domain
AAA_33               PF13671.1    143 sp|P37945|LON1_BACSU -            774     0.002   17.9   0.0   1   1   1.3e-05    0.0053   16.6   0.0     3    38   351   388   349   413 0.79 AAA domain
RNA_helicase         PF00910.17   107 sp|P37945|LON1_BACSU -            774    0.0028   17.8   0.0   1   1   3.2e-05     0.013   15.6   0.0     2    39   351   400   350   451 0.75 RNA helicase
AAA_18               PF13238.1    129 sp|P37945|LON1_BACSU -            774     0.003   17.8   0.1   1   1   7.4e-06     0.003   17.8   0.1     2    25   351   374   350   396 0.83 AAA domain
AAA_19               PF13245.1     76 sp|P37945|LON1_BACSU -            774    0.0031   17.2   0.7   1   1     2e-05    0.0083   15.8   0.1     5    35   343   371   337   393 0.78 Part of AAA domain
UPF0079              PF02367.12   123 sp|P37945|LON1_BACSU -            774    0.0038   16.8   0.4   1   1   3.3e-05     0.013   15.0   0.0    12    42   345   374   335   379 0.84 Uncharacterised P-loop hydrolase UPF0079
IstB_IS21            PF01695.12   178 sp|P37945|LON1_BACSU -            774    0.0042   16.5   0.0   1   1   2.4e-05    0.0099   15.3   0.0    49    73   349   373   311   385 0.74 IstB-like ATP binding protein
NACHT                PF05729.7    166 sp|P37945|LON1_BACSU -            774     0.005   16.5   0.0   1   1   0.00013     0.052   13.1   0.0     3    25   350   372   348   376 0.89 NACHT domain
SKI                  PF01202.17   158 sp|P37945|LON1_BACSU -            774    0.0057   16.5   3.1   2   2   0.00025       0.1   12.4   0.1     1    21   356   376   356   378 0.95 Shikimate kinase
TIP49                PF06068.8    398 sp|P37945|LON1_BACSU -            774    0.0059   15.3   0.2   1   2   1.4e-05    0.0059   15.3   0.2    46    78   343   375   309   385 0.84 TIP49 C-terminus
AAA_25               PF13481.1    194 sp|P37945|LON1_BACSU -            774    0.0078   15.6   1.2   1   1   5.6e-05     0.023   14.0   0.1    33    57   347   371   337   386 0.88 AAA domain
AAA_24               PF13479.1    213 sp|P37945|LON1_BACSU -            774    0.0096   15.5   0.2   1   1   6.6e-05     0.027   14.0   0.2     6    26   350   370   346   375 0.87 AAA domain
Rad17                PF03215.10   519 sp|P37945|LON1_BACSU -            774     0.015   14.0   0.1   1   1   6.3e-05     0.026   13.2   0.1    30    74   331   376   322   391 0.83 Rad17 cell cycle checkpoint protein
NTPase_1             PF03266.10   168 sp|P37945|LON1_BACSU -            774      0.02   14.6   6.1   2   2   0.00013     0.055   13.1   0.1     3    36   351   386   349   400 0.74 NTPase
NB-ARC               PF00931.17   287 sp|P37945|LON1_BACSU -            774     0.037   12.8   1.2   1   1   0.00012      0.05   12.4   0.0    10    46   339   372   325   380 0.76 NB-ARC domain
DUF1804              PF08822.6    165 sp|P37945|LON1_BACSU -            774     0.058   13.1   0.2   1   1   0.00032      0.13   11.9   0.2    68   157    90   185    71   194 0.72 Protein of unknown function (DUF1804)
ATP-synt_ab          PF00006.20   215 sp|P37945|LON1_BACSU -            774     0.091   12.2   0.0   1   1    0.0013      0.52    9.7   0.1     9    42   341   374   335   389 0.80 ATP synthase alpha/beta family, nucleotide-binding domain
ABC_tran             PF00005.22   137 sp|P37945|LON1_BACSU -            774       1.8    8.8   5.0   1   1    0.0016      0.67   10.2   0.1    10    34   346   370   341   400 0.88 ABC transporter
Lon_C                PF05362.8    205 sp|P42425|LON2_BACSU -            552   1.6e-33  115.7   4.4   1   1   4.6e-36   2.8e-33  114.9   3.8    19   204   344   534   323   535 0.77 Lon protease (S16) C-terminal proteolytic domain
AAA                  PF00004.24   132 sp|P42425|LON2_BACSU -            552   1.7e-19   70.3   0.0   1   1   6.3e-22   3.9e-19   69.1   0.0     1   131    93   266    93   267 0.91 ATPase family associated with various cellular activities (AAA)
ChlI                 PF13541.1    121 sp|P42425|LON2_BACSU -            552   1.9e-15   56.4   0.1   1   1   8.1e-18     5e-15   55.0   0.1    22   121   408   506   372   506 0.96 Subunit ChlI of Mg-chelatase
Mg_chelatase         PF01078.16   207 sp|P42425|LON2_BACSU -            552   7.1e-14   51.4   0.0   1   1   2.5e-16   1.5e-13   50.3   0.0     2   140    68   213    67   225 0.77 Magnesium chelatase, subunit ChlI
RuvB_N               PF05496.7    234 sp|P42425|LON2_BACSU -            552   1.6e-13   50.2   1.0   1   2   1.3e-09   8.1e-07   28.3   0.0    13    76    58   116    46   125 0.84 Holliday junction DNA helicase ruvB N-terminus
RuvB_N               PF05496.7    234 sp|P42425|LON2_BACSU -            552   1.6e-13   50.2   1.0   2   2   1.2e-06   0.00075   18.6   0.1   101   213   179   301   174   313 0.73 Holliday junction DNA helicase ruvB N-terminus
Sigma54_activat      PF00158.21   168 sp|P42425|LON2_BACSU -            552   9.6e-12   44.6   0.0   1   1   8.7e-14   5.4e-11   42.2   0.0    20   122    88   208    71   210 0.72 Sigma-54 interaction domain
AAA_22               PF13401.1    131 sp|P42425|LON2_BACSU -            552     6e-10   39.3   0.0   1   1   2.1e-12   1.3e-09   38.3   0.0     5   113    91   205    87   222 0.80 AAA domain
AAA_5                PF07728.9    139 sp|P42425|LON2_BACSU -            552   1.2e-08   34.8   0.0   1   1   2.8e-10   1.7e-07   31.0   0.0     1   139    92   259    92   259 0.77 AAA domain (dynein-related subfamily)
AAA_16               PF13191.1    185 sp|P42425|LON2_BACSU -            552   2.8e-08   33.9   0.0   1   2   7.4e-10   4.6e-07   30.0   0.0     2    54    71   120    70   191 0.89 AAA ATPase domain
AAA_32               PF13654.1    509 sp|P42425|LON2_BACSU -            552   2.9e-05   22.9   0.0   1   2   4.1e-06    0.0025   16.5   0.0     7    61    68   121    60   131 0.84 AAA domain
NACHT                PF05729.7    166 sp|P42425|LON2_BACSU -            552   0.00025   20.7   0.0   1   1   8.2e-07   0.00051   19.7   0.0     3   115    93   232    91   281 0.69 NACHT domain
AAA_2                PF07724.9    171 sp|P42425|LON2_BACSU -            552   0.00072   19.5   0.2   1   1   7.8e-06    0.0048   16.8   0.2     6   107    93   207    90   221 0.83 AAA domain (Cdc48 subfamily)
Arch_ATPase          PF01637.13   234 sp|P42425|LON2_BACSU -            552   0.00088   19.0   0.4   1   1   1.6e-05    0.0096   15.6   0.0     5    50    75   125    71   140 0.80 Archaeal ATPase
AAA_24               PF13479.1    213 sp|P42425|LON2_BACSU -            552    0.0043   16.6   0.0   1   2   8.5e-05     0.052   13.1   0.0     3    21    90   108    88   117 0.85 AAA domain
AAA_19               PF13245.1     76 sp|P42425|LON2_BACSU -            552    0.0051   16.5   0.0   1   1   1.6e-05      0.01   15.5   0.0     2    48    80   129    79   142 0.70 Part of AAA domain
NTPase_1             PF03266.10   168 sp|P42425|LON2_BACSU -            552    0.0052   16.5   0.0   1   2   0.00089      0.55    9.9   0.0     1    26    92   117    92   121 0.91 NTPase
AAA_17               PF13207.1    121 sp|P42425|LON2_BACSU -            552    0.0067   17.2   0.0   1   1   3.3e-05      0.02   15.6   0.0     2    22    93   113    92   156 0.79 AAA domain
NB-ARC               PF00931.17   287 sp|P42425|LON2_BACSU -            552     0.012   14.5   0.0   1   1   3.7e-05     0.023   13.5   0.0     2    57    75   131    74   144 0.78 NB-ARC domain
AAA_14               PF13173.1    128 sp|P42425|LON2_BACSU -            552     0.017   15.0   0.0   1   1   9.9e-05     0.061   13.2   0.0     3    86    91   206    89   272 0.71 AAA domain
Zeta_toxin           PF06414.7    201 sp|P42425|LON2_BACSU -            552     0.024   13.7   0.0   1   1   8.1e-05      0.05   12.7   0.0    15    42    89   117    79   138 0.85 Zeta toxin
RNA_helicase         PF00910.17   107 sp|P42425|LON2_BACSU -            552     0.037   14.2   0.0   1   1   0.00015     0.093   12.9   0.0     1    33    93   125    93   136 0.84 RNA helicase
AAA_18               PF13238.1    129 sp|P42425|LON2_BACSU -            552     0.037   14.3   0.1   1   1   0.00021      0.13   12.5   0.0     1    22    93   114    93   143 0.82 AAA domain
NMD3                 PF04981.8    236 sp|P42425|LON2_BACSU -            552     0.053   12.6   0.0   1   1   0.00022      0.14   11.2   0.0   153   222   257   328   247   336 0.82 NMD3 family
BPD_transp_1         PF00528.17   185 sp|P39128|LPLB_BACSU -            318   4.6e-21   75.1  12.2   2   2   3.1e-25   4.6e-21   75.1  12.2     3   183   106   312   104   314 0.92 Binding-protein-dependent transport system inner membrane component
BPD_transp_1         PF00528.17   185 sp|P39129|LPLC_BACSU -            295   1.2e-32  112.8   6.7   1   1   1.7e-36   1.2e-32  112.8   6.7     2   183    94   288    93   290 0.96 Binding-protein-dependent transport system inner membrane component
Sterol-sensing       PF12349.3    153 sp|P39129|LPLC_BACSU -            295     0.091   12.2   5.4   2   2   2.5e-05      0.19   11.2   0.9    90   125   182   218   114   222 0.93 Sterol-sensing domain of SREBP cleavage-activation
Glyco_hydro_4C       PF11975.3    232 sp|P39130|LPLD_BACSU -            446   2.3e-73  246.8   0.0   1   1   7.9e-77   2.9e-73  246.4   0.0     1   232   199   425   199   425 0.99 Family 4 glycosyl hydrolase C-terminal domain
Glyco_hydro_4        PF02056.11   183 sp|P39130|LPLD_BACSU -            446   3.5e-68  228.5   0.0   1   1   1.4e-71   5.1e-68  228.0   0.0     1   182    11   188    11   189 0.99 Family 4 glycosyl hydrolase
Ldh_1_N              PF00056.18   141 sp|P39130|LPLD_BACSU -            446    0.0028   17.4   0.0   2   2   5.3e-06      0.02   14.7   0.0    95   131   127   163   124   171 0.90 lactate/malate dehydrogenase, NAD binding domain
OTCace               PF00185.19   158 sp|P39130|LPLD_BACSU -            446      0.14   11.9   0.0   1   1   6.9e-05      0.25   11.1   0.0     1    79     8    85     8   101 0.74 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain
Lip_prot_lig_C       PF10437.4     86 sp|O07608|LPLJ_BACSU -            331   3.9e-33  112.9   1.1   2   2   9.1e-36   6.7e-32  109.0   0.1     1    86   245   330   245   330 0.99 Bacterial lipoate protein ligase C-terminus
BPL_LplA_LipB        PF03099.14   125 sp|O07608|LPLJ_BACSU -            331   1.1e-24   86.8   0.0   1   1   2.5e-28   1.8e-24   86.1   0.0     1   123    44   153    44   154 0.93 Biotin/lipoate A/B protein ligase family
LrgA                 PF03788.9     96 sp|P94515|LRGA_BACSU -            146   5.4e-24   83.7  15.3   1   1   9.2e-28   6.8e-24   83.3  15.3     2    95    20   113    19   114 0.97 LrgA family
YfhO                 PF09586.5    843 sp|P94515|LRGA_BACSU -            146      0.16    9.9   5.5   1   1   2.7e-05       0.2    9.6   5.5   345   458    14   122     8   145 0.67 Bacterial membrane protein YfhO
LrgB                 PF04172.11   215 sp|P94516|LRGB_BACSU -            231   7.5e-78  260.5  17.4   1   1   5.7e-82   8.4e-78  260.4  17.4     1   215    14   229    14   229 0.99 LrgB-like family
Peptidase_A8         PF01252.13   152 sp|Q45479|LSPA_BACSU -            154   2.8e-45  153.6   6.7   1   1   1.4e-48   3.4e-45  153.3   6.7     2   150     6   150     4   154 0.92 Signal peptidase (SPase) II
Gly-zipper_Omp       PF13488.1     46 sp|Q45479|LSPA_BACSU -            154    0.0066   16.0   0.5   2   2   0.00015      0.38   10.4   0.2    25    44    84   103    68   108 0.73 Glycine zipper
Shigella_OspC        PF06128.6    284 sp|Q45479|LSPA_BACSU -            154     0.044   13.2   0.0   1   1   2.7e-05     0.066   12.6   0.0    63   105   103   147    95   152 0.77 Shigella flexneri OspC protein
DUF3959              PF13105.1    239 sp|Q45479|LSPA_BACSU -            154     0.052   12.8   3.7   1   1   2.1e-05     0.052   12.8   3.0    55   158     5   109     2   120 0.84 Protein of unknown function (DUF3959)
Sulfatase            PF00884.18   308 sp|Q797B3|LTAS1_BACSU -            639   7.5e-36  123.8   1.7   1   1   2.9e-39   1.1e-35  123.3   1.7     1   307   244   535   244   536 0.90 Sulfatase
DUF229               PF02995.12   497 sp|Q797B3|LTAS1_BACSU -            639   9.5e-06   24.2   0.0   1   1   4.5e-09   1.7e-05   23.4   0.0   302   343   433   474   410   525 0.75 Protein of unknown function (DUF229)
Phosphodiest         PF01663.17   365 sp|Q797B3|LTAS1_BACSU -            639   2.2e-05   23.9   0.1   1   1   1.3e-08   4.7e-05   22.8   0.1   210   262   440   490   321   561 0.80 Type I phosphodiesterase / nucleotide pyrophosphatase
Sulfatase            PF00884.18   308 sp|O34952|LTAS2_BACSU -            649   4.1e-45  154.2   4.4   1   1   1.9e-48   5.5e-45  153.8   4.4     1   308   245   536   245   536 0.93 Sulfatase
DUF229               PF02995.12   497 sp|O34952|LTAS2_BACSU -            649   0.00065   18.2   0.1   1   1   4.1e-07    0.0012   17.3   0.1   301   342   431   472   426   506 0.91 Protein of unknown function (DUF229)
Metalloenzyme        PF01676.13   252 sp|O34952|LTAS2_BACSU -            649     0.002   17.5   0.1   1   1   1.4e-06    0.0041   16.5   0.1   160   250   434   543   421   545 0.82 Metalloenzyme superfamily
Phosphodiest         PF01663.17   365 sp|O34952|LTAS2_BACSU -            649    0.0062   15.8   1.0   2   2   3.3e-06    0.0097   15.2   0.1   212   260   441   487   419   534 0.77 Type I phosphodiesterase / nucleotide pyrophosphatase
DUF1501              PF07394.7    392 sp|O34952|LTAS2_BACSU -            649     0.067   12.0   0.0   1   2    0.0001      0.31    9.8   0.0   269   300   440   471   432   472 0.92 Protein of unknown function (DUF1501)
CCG                  PF02754.11    85 sp|O07020|LUTA_BACSU -            238     5e-35  119.3   7.4   1   3     3e-21   4.5e-17   61.8   0.2     1    85     3    84     3    84 0.97 Cysteine-rich domain
CCG                  PF02754.11    85 sp|O07020|LUTA_BACSU -            238     5e-35  119.3   7.4   3   3   5.3e-21   7.8e-17   61.0   1.5     2    84   132   215   131   216 0.96 Cysteine-rich domain
DUF162               PF02589.10   189 sp|O07021|LUTB_BACSU -            479   3.6e-53  179.8   0.1   1   1   6.4e-56     5e-53  179.4   0.1     3   189    72   295    70   295 0.99 Uncharacterised ACR, YkgG family COG1556
DUF3390              PF11870.3     93 sp|O07021|LUTB_BACSU -            479   1.5e-17   63.2   0.3   1   1   4.6e-20   3.6e-17   62.0   0.3     8    91   385   471   378   473 0.92 Domain of unknown function (DUF3390)
Fer4_8               PF13183.1     57 sp|O07021|LUTB_BACSU -            479   1.5e-09   37.7   0.7   1   1   3.7e-12   2.9e-09   36.8   0.7     3    57   311   377   309   377 0.81 4Fe-4S dicluster domain
Fer4_18              PF13746.1     69 sp|O07021|LUTB_BACSU -            479   6.1e-06   26.5   1.6   1   2   8.8e-06    0.0069   16.7   0.2    47    65   308   326   277   328 0.86 4Fe-4S dicluster domain
Fer4_17              PF13534.1     61 sp|O07021|LUTB_BACSU -            479   1.8e-05   25.0   1.0   1   1   6.4e-08     5e-05   23.5   1.0     1    60   312   377   312   378 0.75 4Fe-4S dicluster domain
Fer4_9               PF13187.1     55 sp|O07021|LUTB_BACSU -            479   1.8e-05   24.9   2.2   1   2   1.1e-05    0.0082   16.3   0.2    36    53   309   326   276   327 0.76 4Fe-4S dicluster domain
Fer4_10              PF13237.1     52 sp|O07021|LUTB_BACSU -            479   5.2e-05   22.9   4.8   1   2   2.6e-06    0.0021   17.8   7.1     8    52   312   374   308   374 0.61 4Fe-4S dicluster domain
Fer4_3               PF12798.2     15 sp|O07021|LUTB_BACSU -            479   0.00013   22.3  13.6   1   2   8.3e-05     0.065   13.8   4.8     1    13   313   325   313   327 0.96 4Fe-4S binding domain
Fer4_3               PF12798.2     15 sp|O07021|LUTB_BACSU -            479   0.00013   22.3  13.6   2   2   0.00011     0.088   13.4   1.5     3    14   365   376   364   377 0.90 4Fe-4S binding domain
Fer4_7               PF12838.2     52 sp|O07021|LUTB_BACSU -            479   0.00051   20.3   8.0   1   2     5e-06    0.0039   17.5   8.3     1    51   312   376   312   377 0.74 4Fe-4S dicluster domain
Fer4_16              PF13484.1     67 sp|O07021|LUTB_BACSU -            479    0.0016   19.1   2.6   1   2   0.00095      0.74   10.6   0.8     1    14   312   325   307   335 0.85 4Fe-4S double cluster binding domain
Fer4                 PF00037.22    24 sp|O07021|LUTB_BACSU -            479    0.0018   17.7  14.0   1   2   3.4e-05     0.026   14.1   4.7     8    20   313   325   311   326 0.94 4Fe-4S binding domain
Fer4_6               PF12837.2     24 sp|O07021|LUTB_BACSU -            479    0.0079   16.0  13.3   1   2   6.3e-05     0.049   13.5   4.7     9    21   313   325   312   329 0.90 4Fe-4S binding domain
DUF1315              PF07023.7     94 sp|O07021|LUTB_BACSU -            479     0.011   15.5   1.1   1   1   1.9e-05     0.015   15.2   0.1    14    85    37   104    35   114 0.79 Protein of unknown function (DUF1315)
Fer4_21              PF14697.1     59 sp|O07021|LUTB_BACSU -            479     0.027   14.3   7.0   1   2   0.00017      0.13   12.1   0.8    40    53   312   325   295   330 0.83 4Fe-4S dicluster domain
NYN_YacP             PF05991.6    166 sp|O07021|LUTB_BACSU -            479     0.054   13.2   0.1   1   1   0.00012     0.097   12.4   0.1    66   121    80   137    71   187 0.71 YacP-like NYN domain
Fer4_4               PF12800.2     17 sp|O07021|LUTB_BACSU -            479       0.1   12.9  11.0   1   2   0.00011     0.082   13.2   2.5     4    15   313   324   309   330 0.94 4Fe-4S binding domain
PRP8_domainIV        PF12134.3    231 sp|O07021|LUTB_BACSU -            479      0.15   11.3   0.0   1   1   0.00034      0.27   10.5   0.0    72   130    79   138    73   146 0.83 PRP8 domain IV core
Fer4_2               PF12797.2     22 sp|O07021|LUTB_BACSU -            479      0.27   11.2  14.8   1   2     7e-05     0.055   13.4   2.8     9    22   312   325   306   325 0.91 4Fe-4S binding domain
DUF162               PF02589.10   189 sp|O32259|LUTC_BACSU -            240   1.6e-37  128.8   0.0   1   1   3.3e-41   2.4e-37  128.2   0.0     4   189    55   237    52   237 0.85 Uncharacterised ACR, YkgG family COG1556
DUF4598              PF15370.1    112 sp|O32259|LUTC_BACSU -            240     0.037   14.3   0.0   1   1   9.1e-06     0.067   13.4   0.0     7    53   179   226   176   233 0.94 Domain of unknown function (DUF4598)
Lactate_perm         PF02652.9    522 sp|P71067|LUTP_BACSU -            563  2.5e-226  752.2  38.6   1   1  1.9e-230  2.9e-226  752.0  38.6     1   522    16   554    16   554 0.99 L-lactate permease
LuxS                 PF02664.10   157 sp|O34667|LUXS_BACSU -            157   6.1e-69  230.5   0.1   1   1   4.6e-73   6.8e-69  230.4   0.1     1   156     2   155     2   156 0.98 S-Ribosylhomocysteinase (LuxS)
LytR_cpsA_psr        PF03816.9    149 sp|Q02115|LYAT_BACSU -            306     2e-49  167.3   1.6   1   1   6.2e-53   2.3e-49  167.1   0.8     1   146    83   224    83   227 0.97 Cell envelope-related transcriptional attenuator domain
ETRAMP               PF09716.5     84 sp|Q02115|LYAT_BACSU -            306     0.016   15.1   1.1   1   2   4.4e-06     0.016   15.1   1.1    49    82     4    37     1    39 0.87 Malarial early transcribed membrane protein (ETRAMP)
DUF3285              PF11688.3     45 sp|Q02115|LYAT_BACSU -            306      0.26   10.9   0.9   1   1   0.00016      0.61    9.7   0.9    12    38     1    24     1    27 0.76 Protein of unknown function (DUF3285)
CW_binding_2         PF04122.7     92 sp|Q02114|LYTC_BACSU -            496   9.8e-66  218.0  19.0   1   3   2.9e-27   7.2e-24   83.8   1.4     1    91    29   118    29   119 0.96 Putative cell wall binding repeat 2
CW_binding_2         PF04122.7     92 sp|Q02114|LYTC_BACSU -            496   9.8e-66  218.0  19.0   2   3   7.2e-25   1.8e-21   76.1   2.2     1    92   128   217   128   217 0.97 Putative cell wall binding repeat 2
CW_binding_2         PF04122.7     92 sp|Q02114|LYTC_BACSU -            496   9.8e-66  218.0  19.0   3   3   2.4e-22   5.9e-19   68.0   1.3     1    92   222   312   222   312 0.96 Putative cell wall binding repeat 2
Amidase_3            PF01520.13   175 sp|Q02114|LYTC_BACSU -            496   1.4e-56  190.9   0.5   1   1   1.4e-59   3.5e-56  189.7   0.5     1   173   322   491   322   493 0.99 N-acetylmuramoyl-L-alanine amidase
Peripla_BP_6         PF13458.1    343 sp|Q02114|LYTC_BACSU -            496   0.00014   21.3   4.2   1   2   2.1e-05     0.052   12.8   0.4    56   134    39   124    33   132 0.77 Periplasmic binding protein
Peripla_BP_6         PF13458.1    343 sp|Q02114|LYTC_BACSU -            496   0.00014   21.3   4.2   2   2   0.00025      0.63    9.3   0.3    55   101   137   182   124   205 0.82 Periplasmic binding protein
TPT                  PF03151.11   153 sp|Q02114|LYTC_BACSU -            496     0.038   13.6   0.2   1   1   4.9e-05      0.12   11.9   0.0    95   121   292   318   290   320 0.96 Triose-phosphate Transporter family
Tom37                PF10568.4     72 sp|Q02114|LYTC_BACSU -            496      0.12   12.6   0.1   1   1   0.00037      0.92    9.8   0.0    30    62   343   375   337   382 0.83 Outer mitochondrial membrane transport complex protein
SPOR                 PF05036.8     76 sp|P39848|LYTD_BACSU -            880   6.4e-12   45.4  22.7   1   5   2.1e-06    0.0053   16.8   0.1    12    66    44    98    42   105 0.90 Sporulation related domain
SPOR                 PF05036.8     76 sp|P39848|LYTD_BACSU -            880   6.4e-12   45.4  22.7   2   5   1.2e-05      0.03   14.4   0.2     6    72   117   184   112   188 0.88 Sporulation related domain
SPOR                 PF05036.8     76 sp|P39848|LYTD_BACSU -            880   6.4e-12   45.4  22.7   3   5     1e-07   0.00025   21.1   0.9     4    72   235   306   232   310 0.90 Sporulation related domain
SH3_3                PF08239.6     55 sp|P39848|LYTD_BACSU -            880   5.6e-09   36.0   0.4   1   1     1e-11   2.6e-08   33.9   0.4     2    41   639   683   638   697 0.82 Bacterial SH3 domain
Glucosaminidase      PF01832.15   136 sp|P39848|LYTD_BACSU -            880   7.7e-07   29.3   9.1   2   2   3.1e-10   7.7e-07   29.3   9.1     2   130   735   859   734   866 0.78 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase
DUF4313              PF14190.1    106 sp|P39848|LYTD_BACSU -            880    0.0025   17.5   0.3   3   3   4.9e-05      0.12   12.0   0.0    43    90   480   527   474   538 0.87 Domain of unknown function (DUF4313)
LysM                 PF01476.15    44 sp|P54421|LYTE_BACSU -            334   1.2e-48  162.6   5.8   1   3   1.4e-16   2.1e-13   49.9   0.2     2    43    29    69    28    70 0.97 LysM domain
LysM                 PF01476.15    44 sp|P54421|LYTE_BACSU -            334   1.2e-48  162.6   5.8   2   3   9.8e-19   1.5e-15   56.8   0.1     1    43    88   129    88   130 0.98 LysM domain
LysM                 PF01476.15    44 sp|P54421|LYTE_BACSU -            334   1.2e-48  162.6   5.8   3   3   5.3e-19   7.9e-16   57.6   0.1     1    43   151   192   151   193 0.98 LysM domain
NLPC_P60             PF00877.14   105 sp|P54421|LYTE_BACSU -            334   1.2e-28   99.0   0.8   1   1   1.8e-31   2.7e-28   97.8   0.2     1   104   232   332   232   333 0.95 NlpC/P60 family
DUF830               PF05708.7    158 sp|P54421|LYTE_BACSU -            334     0.001   19.0   0.0   1   2    0.0004      0.59   10.0   0.0    80   123   218   261   209   281 0.82 Orthopoxvirus protein of unknown function (DUF830)
LRAT                 PF04970.8    126 sp|P54421|LYTE_BACSU -            334    0.0021   18.0   4.3   3   3   0.00014       0.2   11.6   0.0     7    45   278   318   272   329 0.71 Lecithin retinol acyltransferase
UBN2                 PF14223.1    119 sp|P54421|LYTE_BACSU -            334     0.081   12.7   1.4   3   3    0.0004      0.59    9.9   0.1    33    76   149   192   127   225 0.88 gag-polypeptide of LTR copia-type
LysM                 PF01476.15    44 sp|O07532|LYTF_BACSU -            488   8.2e-80  262.4  17.9   1   5   1.2e-16   1.5e-13   50.4   0.1     2    44    30    71    29    71 0.98 LysM domain
LysM                 PF01476.15    44 sp|O07532|LYTF_BACSU -            488   8.2e-80  262.4  17.9   2   5     4e-19   4.9e-16   58.3   0.0     1    44    94   136    94   136 0.99 LysM domain
LysM                 PF01476.15    44 sp|O07532|LYTF_BACSU -            488   8.2e-80  262.4  17.9   3   5     8e-15   9.9e-12   44.5   0.4     1    42   176   216   176   218 0.98 LysM domain
LysM                 PF01476.15    44 sp|O07532|LYTF_BACSU -            488   8.2e-80  262.4  17.9   4   5   3.6e-20   4.4e-17   61.6   0.7     1    43   242   283   242   284 0.98 LysM domain
LysM                 PF01476.15    44 sp|O07532|LYTF_BACSU -            488   8.2e-80  262.4  17.9   5   5   8.1e-19     1e-15   57.3   0.3     1    44   309   351   309   351 0.99 LysM domain
NLPC_P60             PF00877.14   105 sp|O07532|LYTF_BACSU -            488   4.2e-29  100.4   0.1   1   1   9.6e-32   1.2e-28   98.9   0.1     1   104   385   485   385   486 0.95 NlpC/P60 family
DUF830               PF05708.7    158 sp|O07532|LYTF_BACSU -            488    0.0032   17.4   0.0   1   2   6.2e-05     0.076   12.9   0.0    77   126   368   415   362   434 0.79 Orthopoxvirus protein of unknown function (DUF830)
TRAPPC10             PF12584.3    147 sp|O07532|LYTF_BACSU -            488     0.023   14.2  13.8   4   4   0.00015      0.18   11.2   0.1    16    78   268   325   255   344 0.71 Trafficking protein particle complex subunit 10, TRAPPC10
Glucosaminidase      PF01832.15   136 sp|O32083|LYTG_BACSU -            282   2.6e-42  144.1   1.6   1   1   7.3e-46   3.6e-42  143.6   1.6     4   136    58   194    55   194 0.96 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase
SH3_8                PF13457.1     79 sp|O32083|LYTG_BACSU -            282     4e-08   33.2   0.9   2   2   8.2e-12     4e-08   33.2   0.9     3    78   205   276   203   277 0.89 SH3-like domain
Peptidase_M23        PF01551.17    96 sp|O32130|LYTH_BACSU -            326   8.4e-24   83.4   0.1   1   1   1.7e-27   1.2e-23   82.9   0.1     1    91   202   301   202   310 0.88 Peptidase family M23
SLT_2                PF13406.1    262 sp|O32130|LYTH_BACSU -            326      0.14   11.0   0.1   1   1     3e-05      0.23   10.3   0.1   169   203   105   138   100   146 0.87 Transglycosylase SLT domain
Mac                  PF12464.3     55 sp|P37515|MAA_BACSU  -            184   2.1e-18   66.0   0.5   1   1   6.3e-22   3.1e-18   65.5   0.5     1    55     6    59     6    59 0.96 Maltose acetyltransferase
Hexapep              PF00132.19    36 sp|P37515|MAA_BACSU  -            184   9.3e-15   53.3  19.4   2   5   0.00013      0.64    9.6   0.2     1    22    74    95    74    96 0.90 Bacterial transferase hexapeptide (six repeats)
Hexapep              PF00132.19    36 sp|P37515|MAA_BACSU  -            184   9.3e-15   53.3  19.4   3   5   3.8e-05      0.19   11.3   0.2     2    17    95   110    94   111 0.89 Bacterial transferase hexapeptide (six repeats)
Hexapep              PF00132.19    36 sp|P37515|MAA_BACSU  -            184   9.3e-15   53.3  19.4   4   5   3.7e-15   1.8e-11   42.9   4.2     2    36   131   165   130   165 0.96 Bacterial transferase hexapeptide (six repeats)
Hexapep_2            PF14602.1     34 sp|P37515|MAA_BACSU  -            184   3.9e-14   51.8  13.9   1   2     7e-06     0.034   13.6   1.3     2    33    75   110    74   111 0.89 Hexapeptide repeat of succinyl-transferase
Hexapep_2            PF14602.1     34 sp|P37515|MAA_BACSU  -            184   3.9e-14   51.8  13.9   2   2   4.5e-16   2.2e-12   46.2   1.9     1    34   130   165   130   165 0.98 Hexapeptide repeat of succinyl-transferase
2HCT                 PF03390.10   414 sp|O05256|MAEN_BACSU -            448  5.7e-168  558.5  37.6   1   1  4.4e-172  6.5e-168  558.3  37.6     2   414    31   442    30   442 0.99 2-hydroxycarboxylate transporter family
Maf                  PF02545.9    195 sp|Q02169|MAF_BACSU  -            189   3.3e-74  248.2   0.0   1   1   2.5e-78   3.7e-74  248.0   0.0     2   190     4   187     3   189 0.98 Maf-like protein
Glyco_hydro_65m      PF03632.10   370 sp|O06993|MALPY_BACSU -            757  2.1e-148  493.9   7.2   1   1  6.4e-152  3.1e-148  493.3   7.2     1   370   319   692   319   692 0.99 Glycosyl hydrolase family 65 central catalytic domain
Glyco_hydro_65N      PF03636.10   255 sp|O06993|MALPY_BACSU -            757   1.1e-79  267.3   0.1   1   1   3.2e-83   1.6e-79  266.8   0.1     1   255    13   265    13   265 0.98 Glycosyl hydrolase family 65, N-terminal domain
Glyco_hydro_65C      PF03633.10    54 sp|O06993|MALPY_BACSU -            757   2.2e-18   66.0   0.1   1   1   1.3e-21   6.5e-18   64.5   0.1     1    54   696   748   696   748 0.98 Glycosyl hydrolase family 65, C-terminal domain
PMI_typeI            PF01238.16   373 sp|O31646|MANA1_BACSU -            315   6.3e-45  153.7   0.0   1   2   3.7e-45     9e-42  143.3   0.0     4   232     8   197     6   212 0.95 Phosphomannose isomerase type I
PMI_typeI            PF01238.16   373 sp|O31646|MANA1_BACSU -            315   6.3e-45  153.7   0.0   2   2   0.00033      0.81    8.5   0.0   307   372   251   314   237   315 0.87 Phosphomannose isomerase type I
Cupin_2              PF07883.6     71 sp|O31646|MANA1_BACSU -            315   7.3e-07   28.5   0.5   1   2   2.5e-07   0.00061   19.2   0.1    37    57   154   174    94   177 0.91 Cupin domain
JmjC                 PF02373.17   114 sp|O31646|MANA1_BACSU -            315     0.015   15.5   0.1   1   1   1.5e-05     0.037   14.2   0.1    28   100   111   173    93   186 0.77 JmjC domain, hydroxylase
Cupin_1              PF00190.17   144 sp|O31646|MANA1_BACSU -            315      0.07   12.5   0.0   1   1   7.3e-05      0.18   11.2   0.0    82   104   154   174    94   186 0.79 Cupin
PMI_typeI            PF01238.16   373 sp|O05511|MANA2_BACSU -            315   1.2e-46  159.3   0.0   1   1   1.3e-49   3.9e-46  157.7   0.0     1   372     5   314     5   315 0.94 Phosphomannose isomerase type I
Cupin_2              PF07883.6     71 sp|O05511|MANA2_BACSU -            315   3.1e-05   23.3   0.0   1   2   4.9e-06     0.014   14.8   0.0    38    57   155   174   147   181 0.91 Cupin domain
AraC_binding         PF02311.14   136 sp|O05511|MANA2_BACSU -            315    0.0011   18.7   0.1   2   2   0.00024       0.7    9.5   0.0    22    56   264   298   252   299 0.93 AraC-like ligand binding domain
JmjC                 PF02373.17   114 sp|O05511|MANA2_BACSU -            315     0.079   13.2   0.0   1   1   0.00012      0.36   11.0   0.0    28   101   111   174    93   186 0.75 JmjC domain, hydroxylase
PMI_typeI            PF01238.16   373 sp|P39841|MANA3_BACSU -            316   4.8e-86  289.0   0.0   1   1   2.6e-89   5.5e-86  288.8   0.0     2   372     7   315     6   316 0.99 Phosphomannose isomerase type I
Cupin_2              PF07883.6     71 sp|P39841|MANA3_BACSU -            316   7.1e-08   31.8   0.0   1   2   9.8e-06     0.021   14.3   0.0    38    57   156   175   143   178 0.91 Cupin domain
Cupin_2              PF07883.6     71 sp|P39841|MANA3_BACSU -            316   7.1e-08   31.8   0.0   2   2   9.5e-06      0.02   14.3   0.0    25    54   272   301   257   301 0.92 Cupin domain
AraC_binding         PF02311.14   136 sp|P39841|MANA3_BACSU -            316   8.5e-06   25.4   0.0   2   2     4e-07   0.00085   19.0   0.0    21    58   264   301   253   305 0.92 AraC-like ligand binding domain
Cupin_3              PF05899.7     74 sp|P39841|MANA3_BACSU -            316    0.0014   18.0   0.0   2   2     8e-05      0.17   11.2   0.0     6    63   247   310   243   315 0.77 Protein of unknown function (DUF861)
JmjC                 PF02373.17   114 sp|P39841|MANA3_BACSU -            316      0.14   12.4   0.0   1   1   0.00032      0.68   10.2   0.0    27   100   111   174    86   187 0.67 JmjC domain, hydroxylase
Glyco_hydro_26       PF02156.10   311 sp|O05512|MANB1_BACSU -            362  8.1e-129  429.5   4.1   1   1  6.2e-133  9.2e-129  429.3   4.1     1   311    32   350    32   350 0.99 Glycosyl hydrolase family 26
PRD                  PF00874.15    89 sp|O31644|MANR_BACSU -            648   3.1e-36  123.3   7.3   1   2   7.2e-18   1.1e-14   54.3   0.2     4    87   200   283   197   285 0.95 PRD domain
PRD                  PF00874.15    89 sp|O31644|MANR_BACSU -            648   3.1e-36  123.3   7.3   2   2   7.5e-23   1.1e-19   70.2   2.5     3    89   309   397   308   397 0.96 PRD domain
PTS_EIIA_2           PF00359.17   144 sp|O31644|MANR_BACSU -            648   1.1e-28   99.7   3.8   2   2   2.1e-31   3.1e-28   98.2   0.4     6   139   515   644   511   648 0.94 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2
HTH_11               PF08279.7     55 sp|O31644|MANR_BACSU -            648   2.8e-12   46.0   0.0   1   2   5.9e-10   8.8e-07   28.4   0.0     1    53     7    65     7    67 0.93 HTH domain
HTH_11               PF08279.7     55 sp|O31644|MANR_BACSU -            648   2.8e-12   46.0   0.0   2   2   1.1e-05     0.017   14.7   0.0     4    53   100   153    96   155 0.83 HTH domain
PuR_N                PF09182.5     70 sp|O31644|MANR_BACSU -            648   6.1e-08   32.1   0.0   1   2   5.1e-07   0.00075   19.0   0.0     5    61     7    63     5    66 0.93 Bacterial purine repressor, N-terminal
PuR_N                PF09182.5     70 sp|O31644|MANR_BACSU -            648   6.1e-08   32.1   0.0   2   2   0.00039      0.58    9.8   0.0     3    56    95   147    91   150 0.86 Bacterial purine repressor, N-terminal
Mga                  PF05043.8     87 sp|O31644|MANR_BACSU -            648   3.3e-07   30.5   5.9   2   2   9.6e-09   1.4e-05   25.2   0.1    23    80   104   164    80   169 0.86 Mga helix-turn-helix domain
HTH_DeoR             PF08220.7     57 sp|O31644|MANR_BACSU -            648   0.00017   21.0   0.1   1   1   4.3e-07   0.00063   19.2   0.1     1    39     7    47     7    61 0.89 DeoR-like helix-turn-helix domain
PTS_IIB              PF02302.12    90 sp|O31644|MANR_BACSU -            648   0.00087   19.7   0.1   1   1   1.5e-06    0.0022   18.4   0.1     1    58   410   467   410   486 0.82 PTS system, Lactose/Cellobiose specific IIB subunit
HTH_Mga              PF08280.6     59 sp|O31644|MANR_BACSU -            648    0.0022   17.6   0.2   1   1   3.7e-06    0.0055   16.4   0.2     5    49     6    52     2    60 0.86 M protein trans-acting positive regulator (MGA) HTH domain
EutA                 PF06277.6    473 sp|O31644|MANR_BACSU -            648    0.0031   16.2   0.2   1   1   2.1e-06    0.0031   16.2   0.2   320   426   458   565   453   582 0.85 Ethanolamine utilisation protein EutA
GerE                 PF00196.14    58 sp|O31644|MANR_BACSU -            648     0.029   13.6   0.0   1   1     9e-05      0.13   11.5   0.0    22    56    26    60     6    61 0.91 Bacterial regulatory proteins, luxR family
Malic_M              PF03949.10   255 sp|P54572|MAO1_BACSU -            439   6.2e-31  107.8  12.0   1   2   2.1e-11   3.1e-08   33.4   4.0     1    51   236   286   236   304 0.86 Malic enzyme, NAD binding domain
Malic_M              PF03949.10   255 sp|P54572|MAO1_BACSU -            439   6.2e-31  107.8  12.0   2   2   2.2e-25   3.2e-22   79.3   1.1    95   254   306   434   289   435 0.88 Malic enzyme, NAD binding domain
malic                PF00390.14   182 sp|P54572|MAO1_BACSU -            439   6.6e-29  100.7   0.2   1   1   1.8e-29   2.7e-26   92.2   0.2     7   182    97   224    91   224 0.93 Malic enzyme, N-terminal domain
2-Hacid_dh_C         PF02826.14   178 sp|P54572|MAO1_BACSU -            439   2.3e-07   30.1   0.3   2   2   1.6e-10   2.3e-07   30.1   0.3    28    97   252   323   231   327 0.87 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain
NAD_binding_2        PF03446.10   163 sp|P54572|MAO1_BACSU -            439   2.4e-05   24.2   0.1   1   1   1.7e-08   2.4e-05   24.2   0.1     2    63   261   323   260   361 0.90 NAD binding domain of 6-phosphogluconate dehydrogenase
ACT_4                PF13291.1     80 sp|P54572|MAO1_BACSU -            439   3.3e-05   24.1   0.0   1   1   7.9e-08   0.00012   22.3   0.0     8    72     9    72     4    74 0.92 ACT domain
Shikimate_DH         PF01488.15   135 sp|P54572|MAO1_BACSU -            439   3.6e-05   23.8   0.0   1   1   6.4e-08   9.5e-05   22.5   0.0     9   119   257   357   249   368 0.84 Shikimate / quinate 5-dehydrogenase
IlvN                 PF07991.7    165 sp|P54572|MAO1_BACSU -            439   0.00045   19.6   0.1   1   1   6.9e-07     0.001   18.4   0.1     2    67   258   324   257   338 0.90 Acetohydroxy acid isomeroreductase, catalytic domain
THF_DHG_CYH_C        PF02882.14   161 sp|P54572|MAO1_BACSU -            439   0.00058   18.9   0.2   1   1   1.4e-06    0.0021   17.1   0.1    71   105   309   343   225   349 0.81 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain
ACT                  PF01842.20    66 sp|P54572|MAO1_BACSU -            439     0.002   17.5   0.3   1   1   5.6e-06    0.0083   15.5   0.1     2    65     9    73     8    74 0.95 ACT domain
F420_oxidored        PF03807.12    96 sp|P54572|MAO1_BACSU -            439    0.0026   18.1   0.1   2   2   1.8e-06    0.0026   18.1   0.1     1    68   262   324   262   362 0.88 NADP oxidoreductase coenzyme F420-dependent
Malic_M              PF03949.10   255 sp|P45868|MAO2_BACSU -            582     3e-93  312.0   0.2   1   1   8.5e-97   4.2e-93  311.5   0.2     1   255   291   551   291   551 0.99 Malic enzyme, NAD binding domain
malic                PF00390.14   182 sp|P45868|MAO2_BACSU -            582   2.3e-73  245.6   0.0   1   1   7.6e-77   3.8e-73  244.9   0.0     2   182   100   281    99   281 0.98 Malic enzyme, N-terminal domain
Pyr_redox_2          PF07992.9    201 sp|P45868|MAO2_BACSU -            582     0.042   13.7   0.1   1   1     3e-05      0.15   11.9   0.0     1   148   317   488   317   524 0.75 Pyridine nucleotide-disulphide oxidoreductase
Malic_M              PF03949.10   255 sp|O34389|MAO3_BACSU -            566   4.2e-93  311.5   0.0   1   1   7.5e-97   5.5e-93  311.1   0.0     1   255   274   535   274   535 0.99 Malic enzyme, NAD binding domain
malic                PF00390.14   182 sp|O34389|MAO3_BACSU -            566   1.2e-72  243.2   0.0   1   1   2.7e-76     2e-72  242.5   0.0     1   182    82   264    82   264 0.99 Malic enzyme, N-terminal domain
Malic_M              PF03949.10   255 sp|O34962|MAO4_BACSU -            410   1.8e-78  263.6   5.4   1   1   7.9e-82   2.3e-78  263.2   5.4     1   255   160   384   160   384 0.98 Malic enzyme, NAD binding domain
malic                PF00390.14   182 sp|O34962|MAO4_BACSU -            410     4e-33  114.5   0.2   1   1   2.9e-34   8.5e-31  106.9   0.2     2   182    16   148    15   148 0.96 Malic enzyme, N-terminal domain
ELFV_dehydrog        PF00208.16   244 sp|O34962|MAO4_BACSU -            410   1.3e-05   24.9   0.4   2   2   4.3e-09   1.3e-05   24.9   0.4     7    88   160   244   156   289 0.73 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase
DXP_synthase_N       PF13292.1    270 sp|O34962|MAO4_BACSU -            410       0.1   11.5   0.5   2   2     7e-05      0.21   10.5   0.2   102   154   150   202   146   283 0.83 1-deoxy-D-xylulose-5-phosphate synthase
Peptidase_M24        PF00557.19   207 sp|P19994|MAP11_BACSU -            248   1.5e-52  178.2   0.0   1   1   1.1e-56   1.7e-52  178.0   0.0     3   207    13   239    11   239 0.88 Metallopeptidase family M24
Peptidase_M24        PF00557.19   207 sp|O34484|MAP12_BACSU -            249   5.7e-41  140.3   0.1   1   1   8.6e-45   6.4e-41  140.2   0.1     2   207    11   240    10   240 0.86 Metallopeptidase family M24
Vault                PF01505.13    43 sp|O34484|MAP12_BACSU -            249     0.046   13.7   0.0   1   1   1.6e-05      0.12   12.5   0.0     9    37   195   224   194   230 0.85 Major Vault Protein repeat
MreB_Mbl             PF06723.8    327 sp|P39751|MBL_BACSU  -            333    2e-150  499.9  11.2   1   1  1.5e-153  2.3e-150  499.7  11.2     2   325     4   327     3   329 0.99 MreB/Mbl protein
Actin                PF00022.14   393 sp|P39751|MBL_BACSU  -            333   2.4e-13   49.2   0.1   1   2   4.4e-12   6.6e-09   34.6   0.0    31   190    29   193    25   223 0.82 Actin
Actin                PF00022.14   393 sp|P39751|MBL_BACSU  -            333   2.4e-13   49.2   0.1   2   2   1.6e-05     0.024   13.0   0.1   251   335   213   300   200   310 0.77 Actin
HSP70                PF00012.15   602 sp|P39751|MBL_BACSU  -            333   1.7e-11   42.8   5.2   2   2   3.8e-13   5.7e-10   37.7   1.1   139   372    99   319    74   324 0.86 Hsp70 protein
FtsA                 PF14450.1    120 sp|P39751|MBL_BACSU  -            333   4.5e-09   36.1   4.5   2   2     1e-10   1.5e-07   31.2   0.7     3    98   151   307   150   319 0.90 Cell division protein FtsA
PilM_2               PF11104.3    340 sp|P39751|MBL_BACSU  -            333   5.7e-07   28.7   0.3   1   1   1.3e-09   1.9e-06   26.9   0.3   157   317   109   319   103   327 0.69 Type IV pilus assembly protein PilM;
DDR                  PF08841.5    332 sp|P39751|MBL_BACSU  -            333   3.9e-06   25.9   5.1   1   1   4.4e-07   0.00065   18.6   5.1   109   206   122   221   105   310 0.64 Diol dehydratase reactivase ATPase-like domain
EutA                 PF06277.6    473 sp|P39751|MBL_BACSU  -            333   6.1e-06   25.1   1.4   2   2   4.6e-09   6.9e-06   24.9   0.5   124   237   131   243   111   284 0.76 Ethanolamine utilisation protein EutA
Hydantoinase_A       PF01968.13   290 sp|P39751|MBL_BACSU  -            333   3.1e-05   23.2   1.4   1   2   5.3e-07   0.00079   18.6   0.2    79   116   149   185   115   191 0.84 Hydantoinase/oxoprolinase
Ppx-GppA             PF02541.11   285 sp|P39751|MBL_BACSU  -            333    0.0011   18.2   0.1   1   1   1.6e-06    0.0023   17.1   0.1    94   142   129   177   115   202 0.92 Ppx/GppA phosphatase family
FGGY_C               PF02782.11   198 sp|P39751|MBL_BACSU  -            333     0.022   14.4   0.0   1   1   3.7e-05     0.055   13.0   0.1   125   190   246   317   211   320 0.79 FGGY family of carbohydrate kinases, C-terminal domain
Mn_catalase          PF05067.7    284 sp|P80878|MCAT_BACSU -            273  5.7e-134  445.2   0.0   1   1  1.9e-137  6.9e-134  445.0   0.0     1   270     1   268     1   271 1.00 Manganese containing catalase
Ferritin             PF00210.19   142 sp|P80878|MCAT_BACSU -            273   0.00054   19.7   0.0   1   1   2.8e-07     0.001   18.8   0.0    11   130    35   184    23   195 0.75 Ferritin-like domain
Rubrerythrin         PF02915.12   137 sp|P80878|MCAT_BACSU -            273     0.016   15.5   0.0   1   2   0.00013      0.48   10.7   0.0     9    67    34    91    31   108 0.81 Rubrerythrin
Cas_Csa4             PF09703.5    362 sp|P80878|MCAT_BACSU -            273     0.053   12.4   0.0   1   1     2e-05     0.076   11.9   0.0   265   322   149   220   141   229 0.94 CRISPR-associated protein (Cas_Csa4)
PALP                 PF00291.20   306 sp|O05393|MCCA_BACSU -            307   1.7e-59  201.5   0.1   1   1   3.8e-63   1.9e-59  201.4   0.1     1   306     7   292     7   292 0.85 Pyridoxal-phosphate dependent enzyme
DUF1906              PF08924.6    136 sp|O05393|MCCA_BACSU -            307     0.013   15.4   0.0   2   2   2.2e-05      0.11   12.3   0.1    45   134   217   307   210   307 0.83 Domain of unknown function (DUF1906)
SpvB                 PF03534.8    293 sp|O05393|MCCA_BACSU -            307      0.08   11.9   0.0   1   1   2.4e-05      0.12   11.4   0.0    36   117    72   153    66   183 0.82 Salmonella virulence plasmid 65kDa B protein
Cys_Met_Meta_PP      PF01053.15   386 sp|O05394|MCCB_BACSU -            379  1.9e-161  536.6   0.0   1   1  8.7e-165  2.2e-161  536.5   0.0     1   386     4   377     4   377 0.99 Cys/Met metabolism PLP-dependent enzyme
DegT_DnrJ_EryC1      PF01041.12   363 sp|O05394|MCCB_BACSU -            379   3.8e-07   29.4   0.6   1   1   2.9e-10   7.1e-07   28.5   0.6    24   147    49   171    41   249 0.79 DegT/DnrJ/EryC1/StrS aminotransferase family
Aminotran_1_2        PF00155.16   363 sp|O05394|MCCB_BACSU -            379   1.1e-06   27.8   0.0   1   1   6.6e-10   1.6e-06   27.3   0.0    70   204    68   196    24   218 0.68 Aminotransferase class I and II
Aminotran_5          PF00266.14   371 sp|O05394|MCCB_BACSU -            379   8.3e-06   24.7   0.0   1   1   5.5e-09   1.4e-05   24.0   0.0    70   205    74   199    27   229 0.78 Aminotransferase class-V
Met_gamma_lyase      PF06838.6    405 sp|O05394|MCCB_BACSU -            379   0.00068   18.0   0.1   1   1   7.4e-07    0.0018   16.6   0.1   126   239   110   211    24   227 0.72 Methionine gamma-lyase
SelA                 PF03841.8    367 sp|O05394|MCCB_BACSU -            379     0.064   11.9   0.1   1   1   9.3e-05      0.23   10.1   0.1    51   218    54   200    42   221 0.76 L-seryl-tRNA selenium transferase
ATP-gua_Ptrans       PF00217.14   243 sp|P37570|MCSB_BACSU -            363   1.3e-84  283.3   0.0   1   1   1.1e-88   1.6e-84  283.0   0.0     2   242    20   253    19   254 0.98 ATP:guanido phosphotransferase, C-terminal catalytic domain
Ldh_1_N              PF00056.18   141 sp|P49814|MDH_BACSU  -            312   1.9e-42  144.4   0.2   1   1   1.5e-45   2.7e-42  143.9   0.2     2   141     7   147     6   147 0.97 lactate/malate dehydrogenase, NAD binding domain
Ldh_1_C              PF02866.13   174 sp|P49814|MDH_BACSU  -            312   8.1e-32  110.3   0.0   1   1   7.5e-35   1.4e-31  109.5   0.0     2   168   151   309   150   311 0.96 lactate/malate dehydrogenase, alpha/beta C-terminal domain
UDPG_MGDP_dh_N       PF03721.9    185 sp|P49814|MDH_BACSU  -            312   3.4e-05   23.3   1.4   1   1   5.1e-08   9.5e-05   21.8   1.4     1   118     6   122     6   137 0.65 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain
Glyco_hydro_4        PF02056.11   183 sp|P49814|MDH_BACSU  -            312   8.8e-05   21.8   1.4   2   3   1.6e-06     0.003   16.8   0.0   124   164   104   146    99   151 0.82 Family 4 glycosyl hydrolase
DAO                  PF01266.19   358 sp|P49814|MDH_BACSU  -            312    0.0014   17.5   0.7   1   2   1.8e-06    0.0033   16.3   0.2     2    29     8    36     7    44 0.93 FAD dependent oxidoreductase
3HCDH_N              PF02737.13   180 sp|P49814|MDH_BACSU  -            312    0.0034   17.0   1.0   1   1   3.2e-06    0.0059   16.2   0.2     1    35     7    42     7    83 0.66 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain
NAD_binding_8        PF13450.1     68 sp|P49814|MDH_BACSU  -            312    0.0069   16.3   0.1   1   1   7.8e-06     0.014   15.3   0.1     1    26    10    36    10    39 0.90 NAD(P)-binding Rossmann-like domain
SBP_bac_8            PF13416.1    281 sp|O06989|MDXE_BACSU -            417   6.6e-44  150.7  15.3   1   1   3.9e-47   9.6e-44  150.1  15.3     4   276    55   353    52   359 0.78 Bacterial extracellular solute-binding protein
SBP_bac_1            PF01547.20   315 sp|O06989|MDXE_BACSU -            417   2.1e-39  136.0  17.2   1   1   1.2e-42     3e-39  135.6  17.2     7   314    46   328    39   329 0.92 Bacterial extracellular solute-binding protein
SBP_bac_6            PF13343.1    242 sp|O06989|MDXE_BACSU -            417   6.6e-07   28.9   2.2   1   2   1.1e-06    0.0027   17.0   0.0     4    78    89   162    86   171 0.78 Bacterial extracellular solute-binding protein
SBP_bac_6            PF13343.1    242 sp|O06989|MDXE_BACSU -            417   6.6e-07   28.9   2.2   2   2   8.8e-05      0.22   10.8   1.1   172   229   297   354   224   363 0.74 Bacterial extracellular solute-binding protein
SBP_bac_11           PF13531.1    230 sp|O06989|MDXE_BACSU -            417     1e-05   25.2   0.0   1   1     9e-09   2.2e-05   24.1   0.0     1   218    38   325    38   334 0.72 Bacterial extracellular solute-binding protein
FTCD_C               PF04961.7    185 sp|O06989|MDXE_BACSU -            417      0.44    9.9   7.1   1   1   1.3e-05     0.032   13.6   2.1    63   166   313   412   303   415 0.89 Formiminotransferase-cyclodeaminase
BPD_transp_1         PF00528.17   185 sp|O06990|MDXF_BACSU -            435   1.6e-23   83.1  24.1   3   3   1.1e-27   1.6e-23   83.1  24.1     2   174   210   422   209   427 0.92 Binding-protein-dependent transport system inner membrane component
BPD_transp_1         PF00528.17   185 sp|O06991|MDXG_BACSU -            278   3.5e-21   75.5  12.8   2   2   2.4e-25   3.5e-21   75.5  12.8    10   183    97   271    88   273 0.83 Binding-protein-dependent transport system inner membrane component
MecA                 PF05389.7    220 sp|P37958|MECA1_BACSU -            218   3.7e-71  239.1  10.9   1   1   2.8e-75   4.1e-71  239.0  10.9     1   220     1   214     1   214 0.90 Negative regulator of genetic competence (MecA)
MecA                 PF05389.7    220 sp|P50734|MECA2_BACSU -            194   4.2e-58  196.4   3.9   1   1   2.5e-61   1.2e-57  194.9   3.9     1   219     1   190     1   191 0.96 Negative regulator of genetic competence (MecA)
ANF_receptor         PF01094.23   348 sp|P50734|MECA2_BACSU -            194     0.032   13.0   0.0   1   1     8e-06      0.04   12.7   0.0   145   211    67   136    56   175 0.87 Receptor family ligand binding region
Auxin_inducible      PF02519.9    100 sp|P50734|MECA2_BACSU -            194      0.16   12.0   0.0   1   1   6.1e-05       0.3   11.1   0.0    61    85    38    62    34    66 0.94 Auxin responsive protein
Bmp                  PF02608.9    306 sp|O32436|MED_BACSU  -            317   6.7e-86  287.8   8.0   1   1   1.5e-89   7.5e-86  287.6   8.0     1   306    27   317    27   317 0.99 Basic membrane protein
LPAM_2               PF13627.1     24 sp|O32436|MED_BACSU  -            317     0.014   15.0   0.6   1   1   5.9e-06     0.029   14.0   0.6     2    17     5    20     4    21 0.76 Prokaryotic lipoprotein-attachment site
LPAM_1               PF08139.7     25 sp|O32436|MED_BACSU  -            317      0.27   11.5   2.3   1   1     9e-05      0.45   10.8   2.3     6    23     1    18     1    18 0.93 Prokaryotic membrane lipoprotein lipid attachment site
UbiA                 PF01040.13   257 sp|P39582|MENA_BACSU -            311   3.7e-40  137.7  23.4   1   1   4.9e-44   3.7e-40  137.7  23.4     2   223    32   263    31   301 0.86 UbiA prenyltransferase family
ECH                  PF00378.15   245 sp|P23966|MENB_BACSU -            271   7.8e-77  257.7   0.0   1   1   2.4e-80   8.8e-77  257.5   0.0     2   245    15   259    14   259 0.98 Enoyl-CoA hydratase/isomerase family
Peptidase_S49        PF01343.13   154 sp|P23966|MENB_BACSU -            271     0.023   14.4   0.2   1   2   0.00014       0.5   10.1   0.1     7    43   106   142   102   146 0.94 Peptidase family S49
SDH_sah              PF01972.11   286 sp|P23966|MENB_BACSU -            271     0.058   12.1   0.0   1   1   2.2e-05     0.083   11.6   0.0   121   164   107   150    95   170 0.85 Serine dehydrogenase proteinase
DUF1666              PF07891.7    247 sp|P23966|MENB_BACSU -            271      0.11   11.8   0.0   1   1   4.6e-05      0.17   11.2   0.0   199   228   181   210   163   225 0.89 Protein of unknown function (DUF1666)
MR_MLE_C             PF13378.1    111 sp|O34514|MENC_BACSU -            371   5.1e-28   97.2   0.0   1   1   3.1e-31   9.2e-28   96.4   0.0     1   111   239   351   239   351 0.89 Enolase C-terminal domain-like
MR_MLE_N             PF02746.11   117 sp|O34514|MENC_BACSU -            371     1e-14   54.5   0.0   1   1     6e-18   1.8e-14   53.7   0.0     7   117    10   126     4   126 0.86 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain
MR_MLE               PF01188.16    67 sp|O34514|MENC_BACSU -            371   7.1e-13   48.8   0.0   1   1   5.3e-16   1.6e-12   47.7   0.0     2    67   174   239   173   239 0.92 Mandelate racemase / muconate lactonizing enzyme, C-terminal domain
MAAL_C               PF07476.6    249 sp|O34514|MENC_BACSU -            371   1.3e-05   24.3   0.0   1   1   7.1e-09   2.1e-05   23.5   0.0    80   219   183   310   128   315 0.76 Methylaspartate ammonia-lyase C-terminus
Enolase_C            PF00113.17   296 sp|O34514|MENC_BACSU -            371   8.8e-05   21.6   0.0   1   1   6.8e-08    0.0002   20.4   0.0   144   228   204   284   186   320 0.85 Enolase, C-terminal TIM barrel domain
TPP_enzyme_N         PF02776.13   172 sp|P23970|MEND_BACSU -            580   1.2e-28   99.8   0.9   1   2   8.3e-32   3.1e-28   98.4   0.2    11   162    17   174    12   180 0.90 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain
TPP_enzyme_C         PF02775.16   153 sp|P23970|MEND_BACSU -            580   3.4e-11   42.9   0.0   2   2   1.1e-12     4e-09   36.2   0.0    15   153   418   552   409   552 0.82 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain
TPP_enzyme_M         PF00205.17   137 sp|P23970|MEND_BACSU -            580    0.0026   17.4   0.0   2   2   8.2e-06     0.031   14.0   0.0     2    47   210   254   209   317 0.91 Thiamine pyrophosphate enzyme, central domain
Prenyltrans_1        PF13243.1    109 sp|P23970|MEND_BACSU -            580     0.032   14.2   0.0   1   1   1.6e-05     0.058   13.4   0.0    14    68   318   371   310   392 0.85 Prenyltransferase-like
AMP-binding          PF00501.23   417 sp|P23971|MENE_BACSU -            486   6.7e-94  314.6   0.0   1   1   1.1e-97   7.8e-94  314.4   0.0     3   416    11   389     9   390 0.87 AMP-binding enzyme
AMP-binding_C        PF13193.1     73 sp|P23971|MENE_BACSU -            486   2.7e-19   69.8   0.0   1   1     9e-23   6.6e-19   68.6   0.0     1    73   398   471   398   471 0.96 AMP-binding enzyme C-terminal domain
Chorismate_bind      PF00425.13   257 sp|P23973|MENF_BACSU -            471   2.8e-73  246.4   0.0   2   2   4.5e-77   6.7e-73  245.1   0.0     1   257   204   458   204   458 0.98 chorismate binding enzyme
Ubie_methyltran      PF01209.13   233 sp|P31113|MENG_BACSU -            233  7.5e-114  378.6   0.4   1   1    9e-117  8.3e-114  378.4   0.4     1   233     1   233     1   233 0.99 ubiE/COQ5 methyltransferase family
Methyltransf_31      PF13847.1    152 sp|P31113|MENG_BACSU -            233   5.1e-21   74.8   0.0   1   1   8.5e-24   7.9e-21   74.2   0.0     2   112    46   155    45   196 0.93 Methyltransferase domain
Methyltransf_11      PF08241.7     95 sp|P31113|MENG_BACSU -            233   1.9e-20   73.1   0.0   1   1   3.1e-23   2.9e-20   72.5   0.0     1    95    52   151    52   151 0.98 Methyltransferase domain
Methyltransf_23      PF13489.1    161 sp|P31113|MENG_BACSU -            233   7.4e-17   61.5   0.0   1   1   1.1e-19   1.1e-16   61.0   0.0     5   160    31   217    27   218 0.81 Methyltransferase domain
Methyltransf_25      PF13649.1    101 sp|P31113|MENG_BACSU -            233   1.5e-16   60.5   0.0   1   1   4.2e-19   3.9e-16   59.2   0.0     1   101    51   147    51   147 0.94 Methyltransferase domain
Methyltransf_18      PF12847.2    112 sp|P31113|MENG_BACSU -            233   1.3e-14   54.6   0.0   1   1   2.1e-17   1.9e-14   54.1   0.0     2   108    48   150    47   154 0.84 Methyltransferase domain
Methyltransf_12      PF08242.7     99 sp|P31113|MENG_BACSU -            233   1.8e-12   47.5   0.0   1   1     3e-15   2.8e-12   46.9   0.0     1    99    52   149    52   149 0.92 Methyltransferase domain
PCMT                 PF01135.14   210 sp|P31113|MENG_BACSU -            233   4.7e-07   29.5   0.0   1   1   6.7e-10   6.3e-07   29.1   0.0    63   174    37   147     6   164 0.85 Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT)
Methyltransf_26      PF13659.1    117 sp|P31113|MENG_BACSU -            233   7.4e-06   25.9   0.0   1   1   1.4e-08   1.3e-05   25.1   0.0     2   114    49   152    48   155 0.91 Methyltransferase domain
CMAS                 PF02353.15   273 sp|P31113|MENG_BACSU -            233   1.3e-05   24.4   0.1   1   1   2.1e-08   1.9e-05   23.8   0.1    45   164    29   151    12   190 0.75 Mycolic acid cyclopropane synthetase
MTS                  PF05175.9    170 sp|P31113|MENG_BACSU -            233   0.00015   21.2   0.0   1   1   2.4e-07   0.00023   20.6   0.0    25   104    41   122    38   159 0.85 Methyltransferase small domain
Methyltransf_4       PF02390.12   197 sp|P31113|MENG_BACSU -            233   0.00023   20.2   0.0   1   2   1.1e-06     0.001   18.1   0.0    21    81    40   110    10   124 0.80 Putative methyltransferase
MetW                 PF07021.7    193 sp|P31113|MENG_BACSU -            233   0.00046   19.6   0.0   1   1   6.4e-07   0.00059   19.2   0.0    10   103    44   144    36   222 0.72 Methionine biosynthesis protein MetW
FtsJ                 PF01728.14   181 sp|P31113|MENG_BACSU -            233    0.0064   16.4   0.1   1   1   2.1e-05      0.02   14.8   0.0    13    59    37    83    33   122 0.86 FtsJ-like methyltransferase
Methyltransf_3       PF01596.12   205 sp|P31113|MENG_BACSU -            233     0.013   14.5   0.0   1   1   1.8e-05     0.016   14.2   0.0    42   151    41   149     4   155 0.72 O-methyltransferase
Methyltransf_8       PF05148.10   219 sp|P31113|MENG_BACSU -            233     0.014   15.0   0.1   1   1   5.4e-05      0.05   13.2   0.1   112   158   106   153    11   158 0.69 Hypothetical methyltransferase
Abhydrolase_6        PF12697.2    228 sp|P23974|MENH_BACSU -            274   1.1e-32  113.7   0.0   1   1   1.2e-35   1.3e-32  113.5   0.0     1   225    27   263    27   266 0.86 Alpha/beta hydrolase family
Abhydrolase_1        PF00561.15   230 sp|P23974|MENH_BACSU -            274   2.4e-20   73.0   0.0   1   1   3.1e-23   3.3e-20   72.6   0.0     3   228    52   267    50   269 0.86 alpha/beta hydrolase fold
Abhydrolase_5        PF12695.2    145 sp|P23974|MENH_BACSU -            274   1.7e-12   47.3   0.0   1   1   7.4e-15   7.9e-12   45.1   0.0     1   144    26   253    26   254 0.82 Alpha/beta hydrolase family
Ndr                  PF03096.9    283 sp|P23974|MENH_BACSU -            274     7e-08   31.2   0.0   1   1   9.4e-11   9.9e-08   30.7   0.0    51   265    45   260    28   272 0.70 Ndr family
DLH                  PF01738.13   218 sp|P23974|MENH_BACSU -            274   6.2e-05   22.3   0.0   1   2   2.4e-05     0.025   13.8   0.0    94   125    87   119    61   121 0.78 Dienelactone hydrolase family
DUF676               PF05057.9    219 sp|P23974|MENH_BACSU -            274   0.00044   19.6   0.0   1   1   1.1e-06    0.0011   18.2   0.0     6   102    25   115    21   134 0.82 Putative serine esterase (DUF676)
BAAT_C               PF08840.6    213 sp|P23974|MENH_BACSU -            274    0.0016   18.2   0.0   1   1   1.8e-05     0.019   14.7   0.0    20   163    89   255    84   271 0.63 BAAT / Acyl-CoA thioester hydrolase C terminal
DUF915               PF06028.6    255 sp|P23974|MENH_BACSU -            274    0.0019   17.3   0.0   2   2     2e-05     0.021   13.9   0.0    98   126    86   114    63   122 0.83 Alpha/beta hydrolase of unknown function (DUF915)
Thioesterase         PF00975.15   229 sp|P23974|MENH_BACSU -            274    0.0086   16.3   0.0   1   1   1.2e-05     0.013   15.7   0.0     3    87    27   112    25   185 0.75 Thioesterase domain
Lipase_3             PF01764.20   141 sp|P23974|MENH_BACSU -            274     0.052   13.1   0.0   1   1   6.8e-05     0.072   12.7   0.0    52   102    79   132    33   157 0.81 Lipase (class 3)
PGAP1                PF07819.8    225 sp|P23974|MENH_BACSU -            274     0.088   12.3   0.0   1   1   0.00014      0.15   11.6   0.0    73   107    84   114    69   131 0.71 PGAP1-like protein
Abhydrolase_3        PF07859.8    211 sp|P23974|MENH_BACSU -            274       0.1   12.1   0.0   1   1   0.00014      0.14   11.6   0.0    65   143    85   159    70   181 0.70 alpha/beta hydrolase fold
Esterase             PF00756.15   251 sp|P23974|MENH_BACSU -            274      0.15   11.4   0.0   1   1   0.00042      0.45    9.9   0.0   117   147    93   123    71   195 0.83 Putative esterase
HTS                  PF04204.11   298 sp|P54167|META_BACSU -            301  1.8e-136  453.7   1.5   1   1  2.7e-140    2e-136  453.5   1.5     1   298     2   298     2   298 0.99 Homoserine O-succinyltransferase
GATase               PF00117.23   192 sp|P54167|META_BACSU -            301   0.00025   20.5   0.1   1   1   5.1e-08   0.00038   19.9   0.1    31   180    90   243    74   252 0.78 Glutamine amidotransferase class-I
Cys_Met_Meta_PP      PF01053.15   386 sp|O31632|METC_BACSU -            390  9.1e-152  504.8   0.1   1   1  4.2e-155    1e-151  504.6   0.1     1   386     9   382     9   382 0.99 Cys/Met metabolism PLP-dependent enzyme
Aminotran_5          PF00266.14   371 sp|O31632|METC_BACSU -            390   2.2e-07   29.9   0.0   1   1   1.9e-10   4.6e-07   28.9   0.0    64   203    64   202    51   206 0.84 Aminotransferase class-V
Aminotran_1_2        PF00155.16   363 sp|O31632|METC_BACSU -            390   7.2e-07   28.4   0.0   1   1   4.8e-10   1.2e-06   27.7   0.0    46   196    57   184    46   333 0.82 Aminotransferase class I and II
DegT_DnrJ_EryC1      PF01041.12   363 sp|O31632|METC_BACSU -            390   1.2e-05   24.5   0.2   1   3   5.6e-08   0.00014   21.0   0.0    23   140    53   169    36   177 0.79 DegT/DnrJ/EryC1/StrS aminotransferase family
GDC-P                PF02347.11   429 sp|O31632|METC_BACSU -            390    0.0015   17.3   0.0   1   1   8.6e-07    0.0021   16.8   0.0   153   259    92   201    76   218 0.86 Glycine cleavage system P-protein
SelA                 PF03841.8    367 sp|O31632|METC_BACSU -            390      0.03   13.0   0.0   1   1   3.6e-05     0.089   11.5   0.0    96   217   102   204    47   210 0.77 L-seryl-tRNA selenium transferase
Meth_synt_2          PF01717.13   324 sp|P80877|METE_BACSU -            762  1.5e-160  533.5   0.0   2   3   1.2e-10   2.5e-07   30.0   0.0   120   300   151   323   133   332 0.81 Cobalamin-independent synthase, Catalytic domain
Meth_synt_2          PF01717.13   324 sp|P80877|METE_BACSU -            762  1.5e-160  533.5   0.0   3   3  1.2e-153  2.6e-150  499.8   0.0     1   324   430   753   430   753 1.00 Cobalamin-independent synthase, Catalytic domain
Meth_synt_1          PF08267.7    311 sp|P80877|METE_BACSU -            762  7.3e-130  432.7   5.2   1   4  2.9e-118  6.1e-115  383.7   0.6     1   306     5   309     5   314 0.97 Cobalamin-independent synthase, N-terminal domain
Meth_synt_1          PF08267.7    311 sp|P80877|METE_BACSU -            762  7.3e-130  432.7   5.2   3   4   0.00025      0.53    9.4   0.1     3    67   433   495   431   502 0.93 Cobalamin-independent synthase, N-terminal domain
Meth_synt_1          PF08267.7    311 sp|P80877|METE_BACSU -            762  7.3e-130  432.7   5.2   4   4   2.5e-13   5.3e-10   39.0   0.0   136   289   537   698   523   718 0.80 Cobalamin-independent synthase, N-terminal domain
zf-C4H2              PF10146.4    230 sp|P80877|METE_BACSU -            762     0.009   16.0   0.1   1   1   9.9e-06     0.021   14.8   0.1    32    84   352   404   336   455 0.78 Zinc finger-containing protein
URO-D                PF01208.12   343 sp|P80877|METE_BACSU -            762     0.024   13.5   0.1   2   2   6.9e-05      0.15   10.9   0.0   188   341   589   749   552   751 0.75 Uroporphyrinogen decarboxylase (URO-D)
DUF615               PF04751.9    158 sp|P80877|METE_BACSU -            762     0.067   12.8   0.9   1   1   8.2e-05      0.17   11.4   0.2    89   146   347   402   301   412 0.85 Protein of unknown function (DUF615)
Put_DNA-bind_N       PF06971.8     50 sp|P80877|METE_BACSU -            762     0.074   12.8   0.0   1   1   0.00012      0.26   11.0   0.0     5    29   176   201   175   209 0.89 Putative DNA-binding protein N-terminus
Cys_Met_Meta_PP      PF01053.15   386 sp|O31631|METI_BACSU -            373    3e-139  463.6   0.0   1   1  1.3e-141  2.3e-138  460.6   0.0     1   385     6   362     6   363 0.99 Cys/Met metabolism PLP-dependent enzyme
Aminotran_1_2        PF00155.16   363 sp|O31631|METI_BACSU -            373   1.1e-07   31.1   0.0   1   1   1.1e-10     2e-07   30.3   0.0    69   196    69   181    36   214 0.74 Aminotransferase class I and II
DegT_DnrJ_EryC1      PF01041.12   363 sp|O31631|METI_BACSU -            373   1.9e-07   30.4   0.0   1   2     4e-10   7.5e-07   28.5   0.0    22   147    49   173    40   175 0.86 DegT/DnrJ/EryC1/StrS aminotransferase family
Aminotran_5          PF00266.14   371 sp|O31631|METI_BACSU -            373   1.8e-05   23.7   0.0   1   1   1.6e-08   2.9e-05   22.9   0.0    73   204    79   200    36   219 0.81 Aminotransferase class-V
GDC-P                PF02347.11   429 sp|O31631|METI_BACSU -            373    0.0017   17.1   0.0   1   1   1.4e-06    0.0026   16.5   0.0   147   258    84   197    70   202 0.82 Glycine cleavage system P-protein
Met_gamma_lyase      PF06838.6    405 sp|O31631|METI_BACSU -            373     0.045   12.0   0.0   1   1   5.2e-05     0.097   10.9   0.0   143   241   124   215     5   229 0.78 Methionine gamma-lyase
Beta_elim_lyase      PF01212.16   290 sp|O31631|METI_BACSU -            373     0.046   12.8   0.1   1   1   0.00015      0.28   10.2   0.1   112   210   130   215    30   272 0.65 Beta-eliminating lyase
Pyridoxal_deC        PF00282.14   373 sp|O31631|METI_BACSU -            373      0.16   10.3   0.0   1   1   0.00015      0.27    9.6   0.0   320   372   236   287   222   288 0.93 Pyridoxal-dependent decarboxylase conserved domain
S-AdoMet_synt_C      PF02773.11   138 sp|P54419|METK_BACSU -            400   3.3e-75  250.3   0.3   1   1   1.1e-78   5.4e-75  249.6   0.3     1   138   247   386   247   386 0.99 S-adenosylmethionine synthetase, C-terminal domain
S-AdoMet_synt_M      PF02772.11   120 sp|P54419|METK_BACSU -            400   3.9e-56  188.1   0.0   1   1   1.6e-59   8.1e-56  187.1   0.0     2   120   127   245   126   245 0.99 S-adenosylmethionine synthetase, central domain
S-AdoMet_synt_N      PF00438.15   100 sp|P54419|METK_BACSU -            400   6.3e-45  151.4   0.8   1   1   2.6e-48   1.3e-44  150.4   0.3     2   100     5   103     4   103 0.98 S-adenosylmethionine synthetase, N-terminal domain
ABC_tran             PF00005.22   137 sp|O32169|METN_BACSU -            341   4.8e-38  130.5   0.7   1   1   1.2e-40     1e-37  129.4   0.1     2   137    22   169    21   169 0.95 ABC transporter
NIL                  PF09383.5     76 sp|O32169|METN_BACSU -            341   7.4e-26   89.5   0.3   1   1   2.4e-28     2e-25   88.1   0.3     2    76   264   338   263   338 0.98 NIL domain
AAA_21               PF13304.1    303 sp|O32169|METN_BACSU -            341   1.5e-09   38.2   2.0   2   2   6.4e-10   5.2e-07   29.9   0.0   202   302   108   204    68   205 0.72 AAA domain
AAA_22               PF13401.1    131 sp|O32169|METN_BACSU -            341   0.00013   22.1   1.8   1   1   8.6e-06     0.007   16.4   1.4     5   124    32   199    28   207 0.70 AAA domain
DUF258               PF03193.11   161 sp|O32169|METN_BACSU -            341   0.00023   20.3   0.2   1   1   6.4e-07   0.00053   19.2   0.2    17    75    12    78     3    93 0.73 Protein of unknown function, DUF258
AAA_16               PF13191.1    185 sp|O32169|METN_BACSU -            341   0.00024   21.1   0.5   1   1   1.8e-06    0.0015   18.5   0.4    22   177    29   190    19   204 0.54 AAA ATPase domain
AAA_10               PF12846.2    304 sp|O32169|METN_BACSU -            341    0.0003   20.3   0.3   2   2   6.7e-05     0.055   12.8   0.0   146   264    67   202    54   216 0.85 AAA-like domain
SMC_N                PF02463.14   220 sp|O32169|METN_BACSU -            341   0.00076   18.7   4.3   2   3   5.6e-06    0.0046   16.2   0.0   135   212   115   214    59   222 0.65 RecF/RecN/SMC N terminal domain
Miro                 PF08477.8    119 sp|O32169|METN_BACSU -            341     0.004   17.6   0.0   1   1   1.6e-05     0.013   15.9   0.0     3    39    35    70    34    99 0.82 Miro-like protein
MMR_HSR1             PF01926.18   116 sp|O32169|METN_BACSU -            341    0.0041   17.0   1.7   1   1   8.5e-06     0.007   16.3   0.5     2    37    34    71    33   211 0.77 50S ribosome-binding GTPase
SbcCD_C              PF13558.1     90 sp|O32169|METN_BACSU -            341    0.0046   16.8   0.5   1   1   3.9e-05     0.032   14.1   0.5    53    89   154   184   126   185 0.78 Putative exonuclease SbcCD, C subunit
DUF2666              PF10869.3    131 sp|O32169|METN_BACSU -            341     0.018   15.1   0.2   1   1   6.6e-05     0.055   13.5   0.2    29   109   178   262   159   276 0.79 Protein of unknown function (DUF2666)
AAA_29               PF13555.1     62 sp|O32169|METN_BACSU -            341     0.058   12.9   0.1   1   1   0.00016      0.13   11.8   0.1    17    40    26    48    18    51 0.81 P-loop containing region of AAA domain
Cbl_N                PF02262.11   130 sp|O32169|METN_BACSU -            341     0.081   12.6   0.3   2   2   0.00052      0.43   10.2   0.1    23    97   163   239   155   262 0.78 CBL proto-oncogene N-terminal domain 1
AAA_17               PF13207.1    121 sp|O32169|METN_BACSU -            341      0.16   12.8   1.1   1   1   0.00079      0.66   10.8   0.3     2    19    34    51    33    56 0.91 AAA domain
BPD_transp_1         PF00528.17   185 sp|O32168|METP_BACSU -            222   8.4e-23   80.8  20.8   2   2   1.7e-26   8.4e-23   80.8  20.8     5   182    36   222    32   222 0.90 Binding-protein-dependent transport system inner membrane component
DUF2407_C            PF13373.1    140 sp|O32168|METP_BACSU -            222     0.025   14.5   0.2   1   1   9.2e-06     0.046   13.6   0.2    88   130    25    65     9    72 0.85 DUF2407 C-terminal domain
Mt_ATP-synt_B        PF05405.9    163 sp|O32168|METP_BACSU -            222      0.23   10.9   1.0   2   2   7.9e-05      0.39   10.1   0.3    17    45   194   222   191   222 0.96 Mitochondrial ATP synthase B chain precursor (ATP-synt_B)
Lipoprotein_9        PF03180.9    237 sp|O32167|METQ_BACSU -            274   2.5e-87  291.6  13.4   1   1   7.8e-91   2.9e-87  291.5  13.4     1   236    33   272    33   273 0.99 NLPA lipoprotein
SBP_bac_11           PF13531.1    230 sp|O32167|METQ_BACSU -            274   8.5e-05   22.2   0.0   1   1   3.3e-08   0.00012   21.7   0.0   120   226   145   263   106   265 0.81 Bacterial extracellular solute-binding protein
Phosphonate-bd       PF12974.2    243 sp|O32167|METQ_BACSU -            274    0.0016   17.8   0.3   1   1   1.8e-06    0.0068   15.8   0.3    23   131    52   153    33   263 0.75 ABC transporter, phosphonate, periplasmic substrate-binding protein
ADAM_spacer1         PF05986.9    114 sp|O32167|METQ_BACSU -            274     0.031   14.1   0.2   1   2    0.0001      0.38   10.6   0.0    14    57   119   162   113   189 0.87 ADAM-TS Spacer 1
CarD_CdnL_TRCF       PF02559.11    98 sp|P37474|MFD_BACSU  -           1177   7.9e-34  115.6   1.5   1   1   1.3e-36   2.8e-33  113.8   1.5     1    98   499   596   499   596 0.99 CarD-like/TRCF domain
TRCF                 PF03461.10   101 sp|P37474|MFD_BACSU  -           1177   2.6e-28   97.9   2.1   1   1     4e-31   8.5e-28   96.2   2.1     1    99  1024  1122  1024  1124 0.97 TRCF domain
DEAD                 PF00270.24   169 sp|P37474|MFD_BACSU  -           1177   8.7e-22   77.3   2.0   2   3   1.4e-23     3e-20   72.3   0.2     2   165   626   785   625   788 0.83 DEAD/DEAH box helicase
Helicase_C           PF00271.26    78 sp|P37474|MFD_BACSU  -           1177   8.4e-18   64.0   0.0   2   2   1.2e-19   2.6e-16   59.2   0.0     7    77   858   929   854   930 0.96 Helicase conserved C-terminal domain
ResIII               PF04851.10   184 sp|P37474|MFD_BACSU  -           1177   1.3e-07   31.6   0.1   2   2   6.2e-11   1.3e-07   31.6   0.1     5   182   625   781   621   783 0.82 Type III restriction enzyme, res subunit
UB2H                 PF14814.1     85 sp|P37474|MFD_BACSU  -           1177   0.00022   20.9   0.0   1   1     6e-07    0.0013   18.4   0.0     2    43   143   184   142   218 0.85 Bifunctional transglycosylase second domain
MGS                  PF02142.17    95 sp|P42980|MGSA_BACSU -            137   7.8e-18   64.2   0.0   1   1     7e-22     1e-17   63.8   0.0     2    95    15   107    14   107 0.94 MGS-like domain
ArsC                 PF03960.10   110 sp|P54503|MGSR_BACSU -            126   3.1e-37  126.9   0.4   1   1   1.2e-40   3.6e-37  126.7   0.4     1   109     8   115     8   116 0.98 ArsC family
Glutaredoxin         PF00462.19    60 sp|P54503|MGSR_BACSU -            126   8.9e-07   28.8   0.1   1   1   8.2e-10   2.4e-06   27.4   0.0     2    46     6    50     5    55 0.92 Glutaredoxin
DUF1687              PF07955.6    133 sp|P54503|MGSR_BACSU -            126    0.0017   18.3   0.0   1   1   6.6e-07     0.002   18.1   0.0    50   125    35   109     5   123 0.75 Protein of unknown function (DUF1687)
GST_N_3              PF13417.1     75 sp|P54503|MGSR_BACSU -            126     0.025   14.8   0.8   1   2   3.6e-05      0.11   12.7   0.1     1    36     7    43     7    53 0.83 Glutathione S-transferase, N-terminal domain
VEGF_C               PF14554.1     55 sp|P54503|MGSR_BACSU -            126     0.026   14.3   0.1   1   1   1.6e-05     0.047   13.5   0.1    27    51    14    38     6    42 0.83 VEGF heparin-binding domain
MgtE                 PF01769.11   135 sp|O34442|MGTE_BACSU -            451   1.7e-37  128.7   9.0   1   1   1.3e-40   3.3e-37  127.7   9.0     1   135   319   444   319   444 0.99 Divalent cation transporter
MgtE_N               PF03448.12   102 sp|O34442|MGTE_BACSU -            451   1.9e-20   73.0   5.1   1   1   2.4e-23   5.9e-20   71.4   5.1     1   102    33   134    33   134 0.99 MgtE intracellular N domain
CBS                  PF00571.23    57 sp|O34442|MGTE_BACSU -            451   5.5e-19   67.6   2.2   1   2   5.2e-12   1.3e-08   34.5   0.0     2    52   137   192   136   194 0.95 CBS domain
CBS                  PF00571.23    57 sp|O34442|MGTE_BACSU -            451   5.5e-19   67.6   2.2   2   2   8.5e-11   2.1e-07   30.6   1.7     1    55   200   254   200   256 0.93 CBS domain
FliG_C               PF01706.11   110 sp|O34442|MGTE_BACSU -            451     0.017   15.1   2.3   1   1   3.1e-05     0.075   13.0   2.1    20    73    73   126    59   133 0.88 FliG C-terminal domain
PocR                 PF10114.4    173 sp|O34442|MGTE_BACSU -            451     0.084   12.0   0.0   1   1   7.4e-05      0.18   10.9   0.0   106   141   253   288   231   290 0.93 Sensory domain found in PocR
Glyoxalase           PF00903.20   128 sp|O34689|MHQA_BACSU -            316   2.5e-43  147.0   0.1   1   2   2.3e-23   1.1e-19   70.6   0.0     1    70     5   108     5   144 0.84 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily
Glyoxalase           PF00903.20   128 sp|O34689|MHQA_BACSU -            316   2.5e-43  147.0   0.1   2   2   1.2e-24   6.1e-21   74.7   0.0     2   128   155   275   154   275 0.93 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily
Glyoxalase_2         PF12681.2    108 sp|O34689|MHQA_BACSU -            316   2.9e-12   47.1   0.1   1   2     6e-09     3e-05   24.6   0.0     3   107    13   128    12   129 0.77 Glyoxalase-like domain
Glyoxalase_2         PF12681.2    108 sp|O34689|MHQA_BACSU -            316   2.9e-12   47.1   0.1   2   2   9.8e-08   0.00049   20.6   0.0    14   107   173   275   160   276 0.69 Glyoxalase-like domain
Glyoxalase_4         PF13669.1    109 sp|O34689|MHQA_BACSU -            316   1.6e-07   31.3   0.1   2   2   2.1e-08    0.0001   22.2   0.0     5    82   160   237   158   242 0.83 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily
Abhydrolase_5        PF12695.2    145 sp|O34842|MHQD_BACSU -            200   2.3e-10   40.4   0.0   1   1   3.4e-13   4.5e-10   39.4   0.0     2   144    14   181    13   182 0.72 Alpha/beta hydrolase family
Abhydrolase_2        PF02230.11   216 sp|O34842|MHQD_BACSU -            200   2.6e-09   36.8   0.0   1   1   1.4e-11   1.9e-08   33.9   0.0    12   214     9   197     4   199 0.83 Phospholipase/Carboxylesterase
Abhydrolase_6        PF12697.2    228 sp|O34842|MHQD_BACSU -            200   4.6e-08   33.2   0.2   1   2   3.9e-08   5.3e-05   23.2   0.2     1   102    14   128    14   138 0.77 Alpha/beta hydrolase family
DLH                  PF01738.13   218 sp|O34842|MHQD_BACSU -            200   6.4e-07   28.8   0.0   1   1     6e-10   8.1e-07   28.5   0.0    80   195    74   188    53   198 0.85 Dienelactone hydrolase family
Peptidase_S9         PF00326.16   213 sp|O34842|MHQD_BACSU -            200   4.5e-05   22.7   0.0   1   2   5.5e-07   0.00074   18.7   0.0    43   107    74   135    65   166 0.75 Prolyl oligopeptidase family
Abhydrolase_3        PF07859.8    211 sp|O34842|MHQD_BACSU -            200   0.00038   20.0   0.0   1   2   4.8e-06    0.0065   16.0   0.0    63   110    83   127    69   138 0.83 alpha/beta hydrolase fold
FSH1                 PF03959.8    212 sp|O34842|MHQD_BACSU -            200   0.00071   19.0   0.0   1   1   5.1e-06    0.0069   15.8   0.0    85   202    75   183    60   192 0.76 Serine hydrolase (FSH1)
Esterase_phd         PF10503.4    220 sp|O34842|MHQD_BACSU -            200    0.0029   16.9   0.0   1   2   7.9e-06     0.011   15.0   0.1    84   128    79   123    66   129 0.89 Esterase PHB depolymerase
Abhydrolase_1        PF00561.15   230 sp|O34842|MHQD_BACSU -            200     0.014   14.9   0.0   1   1   1.2e-05     0.016   14.7   0.0    25    92    71   178    53   197 0.79 alpha/beta hydrolase fold
Ndr                  PF03096.9    283 sp|O34842|MHQD_BACSU -            200      0.11   10.9   0.0   1   1   0.00011      0.14   10.5   0.0    94   133    87   126    64   133 0.86 Ndr family
Abhydrolase_4        PF08386.5    103 sp|O34842|MHQD_BACSU -            200      0.13   12.2   0.0   1   1   0.00017      0.23   11.3   0.0    35    77   140   185   124   195 0.82 TAP-like protein
Glyoxalase           PF00903.20   128 sp|O34543|MHQE_BACSU -            303   6.4e-37  126.3   0.0   1   1   1.7e-39   6.5e-36  123.1   0.0     1   128     5   263     5   263 0.96 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily
Glyoxalase_2         PF12681.2    108 sp|O34543|MHQE_BACSU -            303   1.3e-07   32.1   0.1   1   2     3e-08   0.00011   22.7   0.0     3   106    13   125    12   127 0.74 Glyoxalase-like domain
hGDE_N               PF14699.1     86 sp|O34543|MHQE_BACSU -            303      0.12   12.2   0.1   1   1   7.9e-05      0.29   10.9   0.1    49    78    35    84    11    91 0.74 N-terminal domain from the human glycogen debranching enzyme
Nitroreductase       PF00881.19   165 sp|P96692|MHQN_BACSU -            206   4.9e-27   94.7   0.1   1   1     8e-31   5.9e-27   94.5   0.1     2   165     9   184     8   184 0.90 Nitroreductase family
CytoC_RC             PF02276.13   315 sp|P96692|MHQN_BACSU -            206      0.13   11.3   0.1   1   1     2e-05      0.15   11.1   0.1    44    73    84   113    38   153 0.70 Photosynthetic reaction centre cytochrome C subunit
Glyoxalase           PF00903.20   128 sp|P96693|MHQO_BACSU -            312   4.1e-40  136.7   0.4   1   1   3.5e-43   5.2e-39  133.1   0.4     1   128     7   266     7   266 0.96 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily
DoxX                 PF07681.7     85 sp|P96694|MHQP_BACSU -            129     1e-20   73.8   9.6   1   2   1.4e-24     1e-20   73.8   9.6     1    85     5    93     5    93 0.98 DoxX
DoxX_2               PF13564.1    103 sp|P96694|MHQP_BACSU -            129    0.0025   17.7   9.4   1   1   3.4e-07    0.0025   17.7   9.4     4   100    11   114     8   117 0.73 DoxX-like family
IPPT                 PF01715.12   253 sp|O31795|MIAA_BACSU -            314  2.6e-105  350.9   1.0   1   1  2.7e-108  3.1e-105  350.7   1.0     1   252    40   291    40   292 0.99 IPP transferase
IPT                  PF01745.11   233 sp|O31795|MIAA_BACSU -            314   1.7e-10   40.5   0.1   1   2   2.5e-11   2.9e-08   33.1   0.0     3    59     8    64     6   117 0.84 Isopentenyl transferase
AAA_17               PF13207.1    121 sp|O31795|MIAA_BACSU -            314     4e-06   27.6   0.1   1   1   8.6e-09   9.8e-06   26.3   0.1     1    65     8    73     8   304 0.83 AAA domain
AAA_33               PF13671.1    143 sp|O31795|MIAA_BACSU -            314   5.7e-05   23.0   0.1   1   1   2.5e-07   0.00028   20.7   0.1     1    33     8    54     8   225 0.82 AAA domain
AAA_18               PF13238.1    129 sp|O31795|MIAA_BACSU -            314   0.00034   20.9   0.8   1   1     4e-05     0.046   14.0   0.8     1    23     9    62     9   217 0.53 AAA domain
AAA                  PF00004.24   132 sp|O31795|MIAA_BACSU -            314     0.002   18.3   0.1   1   2   5.4e-05     0.061   13.5   0.0     1    37     9    44     9    94 0.83 ATPase family associated with various cellular activities (AAA)
SKI                  PF01202.17   158 sp|O31795|MIAA_BACSU -            314    0.0038   17.1   0.8   1   2   0.00056      0.64    9.8   0.1     2    42    16    57    15    61 0.82 Shikimate kinase
MobB                 PF03205.9    140 sp|O31795|MIAA_BACSU -            314     0.011   15.4   0.1   1   1   2.6e-05     0.029   14.0   0.0     1    48     7    57     7    63 0.83 Molybdopterin guanine dinucleotide synthesis protein B
AAA_14               PF13173.1    128 sp|O31795|MIAA_BACSU -            314     0.017   15.0   0.2   1   1   4.7e-05     0.054   13.4   0.0     2    33     6    35     5    71 0.81 AAA domain
Zeta_toxin           PF06414.7    201 sp|O31795|MIAA_BACSU -            314     0.017   14.2   0.1   1   2   6.9e-05     0.079   12.0   0.0    15    54     5    41     1    92 0.85 Zeta toxin
AAA_22               PF13401.1    131 sp|O31795|MIAA_BACSU -            314      0.02   15.0   0.2   1   2   0.00032      0.36   10.9   0.0     4    41     6    51     2   102 0.69 AAA domain
AAA_25               PF13481.1    194 sp|O31795|MIAA_BACSU -            314      0.11   11.8   0.0   1   1   0.00026      0.29   10.4   0.0    35    57     8    30     3    50 0.87 AAA domain
Radical_SAM          PF04055.16   166 sp|O31778|MIAB_BACSU -            509   8.1e-38  130.2   0.2   1   1   4.8e-41   1.8e-37  129.0   0.1     1   165   215   386   215   387 0.97 Radical SAM superfamily
UPF0004              PF00919.15    98 sp|O31778|MIAB_BACSU -            509   4.6e-29  100.1   0.1   1   1   3.1e-32   1.1e-28   98.8   0.1     1    98    67   168    67   168 0.96 Uncharacterized protein family UPF0004
TRAM                 PF01938.15    61 sp|O31778|MIAB_BACSU -            509   8.4e-17   60.7   0.6   1   1   4.5e-20   1.7e-16   59.7   0.6     2    61   441   502   440   502 0.96 TRAM domain
MinC_C               PF03775.11   105 sp|Q01463|MINC_BACSU -            226   2.9e-33  113.6   0.4   1   1   9.2e-37   6.8e-33  112.4   0.4     2   104   106   208   105   209 0.96 Septum formation inhibitor MinC, C-terminal domain
DUF342               PF03961.8    451 sp|Q01463|MINC_BACSU -            226     0.092   11.1   4.2   2   2   1.4e-05      0.11   10.9   2.1   190   224   113   148    73   153 0.78 Protein of unknown function (DUF342)
CbiA                 PF01656.18   195 sp|Q01464|MIND_BACSU -            268   9.1e-37  126.3   1.5   1   1   1.2e-39   1.2e-36  125.9   1.5     1   174     5   192     5   212 0.76 CobQ/CobB/MinD/ParA nucleotide binding domain
AAA_31               PF13614.1    157 sp|Q01464|MIND_BACSU -            268     4e-19   69.0   0.0   1   1   6.5e-22   6.5e-19   68.4   0.0     2   154     4   149     3   152 0.91 AAA domain
MipZ                 PF09140.6    261 sp|Q01464|MIND_BACSU -            268   1.7e-13   50.2   1.1   1   2   6.1e-16     6e-13   48.4   0.5     2   136     4   154     3   194 0.71 ATPase MipZ
Fer4_NifH            PF00142.13   273 sp|Q01464|MIND_BACSU -            268   2.4e-11   43.3   4.0   1   2     5e-08     5e-05   22.6   0.1     5    37     8    40     4    77 0.87 4Fe-4S iron sulfur cluster binding proteins, NifH/frxC family
Fer4_NifH            PF00142.13   273 sp|Q01464|MIND_BACSU -            268   2.4e-11   43.3   4.0   2   2   7.3e-08   7.2e-05   22.0   0.7   115   256   112   247    97   262 0.80 4Fe-4S iron sulfur cluster binding proteins, NifH/frxC family
YhjQ                 PF06564.7    244 sp|Q01464|MIND_BACSU -            268   1.8e-09   37.3   0.5   1   1   7.1e-12     7e-09   35.3   0.5     9   153    10   149     3   222 0.77 YhjQ protein
ArsA_ATPase          PF02374.10   305 sp|Q01464|MIND_BACSU -            268   3.7e-09   36.0   4.3   1   3   2.4e-11   2.4e-08   33.4   0.5     3    38     5    40     3    56 0.94 Anion-transporting ATPase
ParA                 PF10609.4     81 sp|Q01464|MIND_BACSU -            268   1.4e-05   24.8   0.1   1   1     6e-08   5.9e-05   22.8   0.0     2    52   115   163   114   190 0.87 ParA/MinD ATPase like
AAA_25               PF13481.1    194 sp|Q01464|MIND_BACSU -            268   0.00035   20.0   1.2   1   1   9.2e-07   0.00091   18.6   0.8    35   165     5   136     2   153 0.67 AAA domain
SRP54                PF00448.17   196 sp|Q01464|MIND_BACSU -            268   0.00063   19.2   2.9   1   2   2.4e-05     0.023   14.1   1.0     3    39     5    41     3    43 0.91 SRP54-type protein, GTPase domain
VirC1                PF07015.6    231 sp|Q01464|MIND_BACSU -            268    0.0015   17.6   0.3   1   1   4.3e-06    0.0043   16.1   0.3     4    39     5    40     3    46 0.93 VirC1 protein
MobB                 PF03205.9    140 sp|Q01464|MIND_BACSU -            268      0.02   14.5   0.6   1   1     2e-05      0.02   14.5   0.6     2    45     5    47     4    50 0.92 Molybdopterin guanine dinucleotide synthesis protein B
AAA_24               PF13479.1    213 sp|Q01464|MIND_BACSU -            268     0.082   12.4   0.5   1   1   0.00019      0.19   11.3   0.5     9    75     9   120     3   127 0.74 AAA domain
AAA_17               PF13207.1    121 sp|Q01464|MIND_BACSU -            268     0.093   13.5   2.4   1   1   0.00044      0.43   11.4   2.4     1    33     5    41     5   243 0.75 AAA domain
AAA_18               PF13238.1    129 sp|Q01464|MIND_BACSU -            268      0.24   11.6   1.3   1   1   0.00075      0.74   10.1   0.6     4    80     9   120     6   154 0.47 AAA domain
PDZ_2                PF13180.1     82 sp|O34375|MINJ_BACSU -            397   1.8e-06   27.7   0.0   1   1   9.7e-10   3.6e-06   26.7   0.0     7    59   299   349   284   357 0.88 PDZ domain
PDZ                  PF00595.19    81 sp|O34375|MINJ_BACSU -            397   0.00012   22.1   0.0   1   1   6.9e-08   0.00026   21.1   0.0    23    62   294   341   280   358 0.80 PDZ domain (Also known as DHR or GLGF)
Tricorn_PDZ          PF14685.1     88 sp|O34375|MINJ_BACSU -            397     0.011   15.4   0.0   1   1   5.2e-06     0.019   14.7   0.0    38    76   320   357   316   366 0.82 Tricorn protease PDZ domain
PDZ_1                PF12812.2     78 sp|O34375|MINJ_BACSU -            397     0.058   13.2   0.3   1   1   3.4e-05      0.13   12.2   0.0    49    72   323   346   298   349 0.84 PDZ-like domain
60KD_IMP             PF02096.15   198 sp|Q01625|MISCA_BACSU -            261     5e-71  238.4  15.3   1   1   1.4e-74   6.7e-71  238.0  15.3     2   195    60   244    59   246 0.96 60Kd inner membrane protein
DUF2208              PF09973.4    233 sp|Q01625|MISCA_BACSU -            261     0.019   14.2   8.8   1   2   3.1e-05      0.15   11.2   0.8    13   112    49   151    46   165 0.76 Predicted membrane protein (DUF2208)
OmpH                 PF03938.9    158 sp|Q01625|MISCA_BACSU -            261      0.39   10.6   6.7   1   1   0.00013      0.66    9.9   6.7    74   113    86   125    80   132 0.73 Outer membrane protein (OmpH-like)
60KD_IMP             PF02096.15   198 sp|P54544|MISCB_BACSU -            275   7.5e-54  182.4  15.3   1   1   1.3e-57   9.5e-54  182.0  15.3     2   195    62   259    61   262 0.91 60Kd inner membrane protein
FA_desaturase        PF00487.19   257 sp|P54544|MISCB_BACSU -            275       1.1    8.6   8.5   2   2   5.7e-06     0.042   13.2   1.5    88   180   167   261   149   272 0.83 Fatty acid desaturase
Na_H_antiporter      PF03553.9    303 sp|P54571|MLEN_BACSU -            468   1.4e-83  280.4  46.5   1   2   9.7e-20   4.8e-16   58.6  16.8   103   279    14   188     5   189 0.82 Na+/H+ antiporter family
Na_H_antiporter      PF03553.9    303 sp|P54571|MLEN_BACSU -            468   1.4e-83  280.4  46.5   2   2   1.1e-73   5.3e-70  235.8  21.7     1   302   159   451   159   452 0.99 Na+/H+ antiporter family
DcuC                 PF03606.10   465 sp|P54571|MLEN_BACSU -            468      0.11   10.6  41.7   1   2   1.1e-06    0.0055   14.9  21.7   261   462     8   209     4   212 0.79 C4-dicarboxylate anaerobic carrier
MFS_1                PF07690.11   352 sp|Q00538|MMR_BACSU  -            466   7.8e-42  143.2  88.6   1   2   3.4e-45   2.5e-41  141.5  65.4     1   351    22   414    22   415 0.88 Major Facilitator Superfamily
MFS_1                PF07690.11   352 sp|Q00538|MMR_BACSU  -            466   7.8e-42  143.2  88.6   2   2   6.2e-07    0.0046   15.7  15.2    85   173   362   455   361   465 0.85 Major Facilitator Superfamily
Sugar_tr             PF00083.19   451 sp|Q00538|MMR_BACSU  -            466   2.5e-06   26.3  13.5   1   3   3.3e-10   2.5e-06   26.3  13.5    48   157    54   165    14   192 0.81 Sugar (and other) transporter
Epimerase_2          PF02350.14   346 sp|P39131|MNAA_BACSU -            380  9.8e-118  392.8   0.1   1   1  1.5e-121  1.1e-117  392.6   0.1     2   345    25   363    24   364 0.95 UDP-N-acetylglucosamine 2-epimerase
Glyco_trans_4_2      PF13477.1    139 sp|P39131|MNAA_BACSU -            380    0.0031   17.3   0.0   1   1   8.2e-07    0.0061   16.4   0.0    57    97    70   112    20   137 0.75 Glycosyl transferase 4-like
tRNA_Me_trans        PF03054.11   356 sp|O35020|MNMA_BACSU -            371  8.6e-152  504.7   0.0   1   1  3.9e-155  9.8e-152  504.6   0.0     2   356     9   358     8   358 0.99 tRNA methyl transferase
NAD_synthase         PF02540.12   242 sp|O35020|MNMA_BACSU -            371   9.5e-08   31.2   0.0   1   3   9.9e-10   2.4e-06   26.6   0.0    19    89     8    85     2   131 0.75 NAD synthase
Asn_synthase         PF00733.16   255 sp|O35020|MNMA_BACSU -            371   5.4e-06   26.0   0.0   1   1   4.1e-09     1e-05   25.1   0.0    16    95     6    92     1   197 0.85 Asparagine synthase
ThiI                 PF02568.9    197 sp|O35020|MNMA_BACSU -            371   0.00019   20.9   0.0   1   1   1.6e-07   0.00039   19.9   0.0     4    48     8    52     6    94 0.72 Thiamine biosynthesis protein (ThiI)
ATP_bind_3           PF01171.15   182 sp|O35020|MNMA_BACSU -            371   0.00079   18.9   0.0   1   1   1.2e-06     0.003   17.0   0.0     2   161    10   188     9   207 0.66 PP-loop family
QueC                 PF06508.8    210 sp|O35020|MNMA_BACSU -            371    0.0015   17.9   0.1   1   2   9.8e-06     0.024   13.9   0.0     2    30    10    38     9    53 0.90 Queuosine biosynthesis protein QueC
TrmE_N               PF10396.4    114 sp|P25811|MNME_BACSU -            459   3.9e-43  146.0   0.2   1   1   1.3e-45   1.2e-42  144.4   0.1     1   114     3   124     3   124 0.94 GTP-binding protein TrmE N-terminus
MMR_HSR1             PF01926.18   116 sp|P25811|MNME_BACSU -            459   2.6e-24   85.3   0.2   1   1     6e-27   5.6e-24   84.3   0.2     3   116   225   336   223   336 0.89 50S ribosome-binding GTPase
GTPase_Cys_C         PF12631.2     73 sp|P25811|MNME_BACSU -            459   3.5e-19   68.9   0.1   1   1   1.3e-21   1.2e-18   67.2   0.1     4    73   387   456   384   456 0.96 Catalytic cysteine-containing C-terminus of GTPase, MnmE
FeoB_N               PF02421.13   156 sp|P25811|MNME_BACSU -            459   8.5e-12   44.6   0.9   1   1     2e-14   1.8e-11   43.5   0.9     3   156   224   375   222   375 0.86 Ferrous iron transport protein B
Dynamin_N            PF00350.18   168 sp|P25811|MNME_BACSU -            459   2.9e-08   33.7   0.5   1   2     9e-06    0.0084   15.9   0.0     2    34   225   257   224   265 0.85 Dynamin family
Dynamin_N            PF00350.18   168 sp|P25811|MNME_BACSU -            459   2.9e-08   33.7   0.5   2   2   1.7e-05     0.015   15.0   0.0   102   150   270   321   262   337 0.78 Dynamin family
Miro                 PF08477.8    119 sp|P25811|MNME_BACSU -            459     3e-08   34.1   0.0   1   1     9e-11   8.3e-08   32.7   0.0     3   119   225   338   224   338 0.78 Miro-like protein
AIG1                 PF04548.11   212 sp|P25811|MNME_BACSU -            459   4.2e-07   29.2   0.2   1   1   9.1e-10   8.5e-07   28.2   0.2     4   108   225   326   222   337 0.88 AIG1 family
Ras                  PF00071.17   162 sp|P25811|MNME_BACSU -            459   1.2e-05   24.7   0.0   1   1   4.1e-08   3.8e-05   23.1   0.0     3   133   225   354   223   379 0.71 Ras family
DUF258               PF03193.11   161 sp|P25811|MNME_BACSU -            459   0.00024   20.3   0.1   1   1   7.1e-07   0.00066   18.8   0.1    30    99   215   281   184   294 0.70 Protein of unknown function, DUF258
GTP_EFTU             PF00009.22   188 sp|P25811|MNME_BACSU -            459    0.0018   17.7   0.2   1   1   0.00083      0.77    9.1   0.2    90   182   294   375   220   381 0.51 Elongation factor Tu GTP binding domain
AAA_16               PF13191.1    185 sp|P25811|MNME_BACSU -            459    0.0058   16.6   0.3   2   2   3.8e-05     0.036   14.0   0.0     7    50   203   247   202   355 0.83 AAA ATPase domain
AAA_25               PF13481.1    194 sp|P25811|MNME_BACSU -            459     0.014   14.8   1.9   2   3   0.00019      0.18   11.2   0.0    28    55   216   243   190   333 0.87 AAA domain
Arch_ATPase          PF01637.13   234 sp|P25811|MNME_BACSU -            459     0.033   13.8   0.1   1   1   7.1e-05     0.066   12.8   0.1     6    45   203   246   202   333 0.77 Archaeal ATPase
AAA_22               PF13401.1    131 sp|P25811|MNME_BACSU -            459     0.065   13.3   0.0   1   1   0.00021      0.19   11.8   0.0     4    45   221   252   218   333 0.74 AAA domain
Cyc-maltodext_C      PF10438.4     78 sp|P25811|MNME_BACSU -            459     0.098   12.7   0.4   1   1   0.00078      0.73    9.9   0.1    20    49   327   356   263   375 0.88 Cyclo-malto-dextrinase C-terminal domain
GIDA                 PF01134.17   392 sp|P25812|MNMG_BACSU -            628  3.4e-171  569.4   0.3   1   1  4.8e-174  6.5e-171  568.4   0.0     1   392     9   399     9   399 1.00 Glucose inhibited division protein A
GIDA_assoc_3         PF13932.1     72 sp|P25812|MNMG_BACSU -            628   6.1e-32  109.4   0.4   1   1   2.1e-34   2.8e-31  107.3   0.6     1    72   545   616   545   616 0.99 GidA associated domain 3
DAO                  PF01266.19   358 sp|P25812|MNMG_BACSU -            628   3.5e-08   32.7   2.4   1   2    0.0001      0.13   11.0   1.3     1    28     9    36     9    39 0.96 FAD dependent oxidoreductase
DAO                  PF01266.19   358 sp|P25812|MNMG_BACSU -            628   3.5e-08   32.7   2.4   2   2   1.6e-07   0.00021   20.3   0.0   141   204    97   161    73   179 0.86 FAD dependent oxidoreductase
FAD_binding_2        PF00890.19   417 sp|P25812|MNMG_BACSU -            628   5.9e-08   31.9   9.6   1   3   1.1e-07   0.00014   20.8   2.6     1    29     9    37     9    39 0.97 FAD binding domain
FAD_binding_2        PF00890.19   417 sp|P25812|MNMG_BACSU -            628   5.9e-08   31.9   9.6   2   3   2.2e-05     0.029   13.2   0.2   140   204   102   161    60   179 0.75 FAD binding domain
Pyr_redox_2          PF07992.9    201 sp|P25812|MNMG_BACSU -            628   2.2e-06   27.7   0.3   1   1   4.1e-09   5.5e-06   26.4   0.3     1   121     9   159     9   169 0.58 Pyridine nucleotide-disulphide oxidoreductase
FAD_oxidored         PF12831.2    428 sp|P25812|MNMG_BACSU -            628   7.6e-05   21.9   5.6   1   1   2.4e-07   0.00033   19.8   5.6     1    29     9    37     9   160 0.55 FAD dependent oxidoreductase
HI0933_like          PF03486.9    409 sp|P25812|MNMG_BACSU -            628    0.0037   15.8   1.3   1   2   7.8e-06      0.01   14.3   0.5     1    29     8    36     8    42 0.93 HI0933-like protein
Thi4                 PF01946.12   230 sp|P25812|MNMG_BACSU -            628    0.0068   15.5   0.2   1   2   2.5e-05     0.034   13.2   0.1    17    49     7    39     3    47 0.89 Thi4 family
Pyr_redox_3          PF13738.1    203 sp|P25812|MNMG_BACSU -            628     0.038   14.0   1.0   1   1   0.00013      0.18   11.8   1.0     1   137    11   159    11   186 0.75 Pyridine nucleotide-disulphide oxidoreductase
Lycopene_cycl        PF05834.7    374 sp|P25812|MNMG_BACSU -            628      0.15   10.9   0.4   1   1   0.00021      0.28   10.0   0.4     1    30     9    38     9    48 0.86 Lycopene cyclase protein
NAD_binding_9        PF13454.1    156 sp|P25812|MNMG_BACSU -            628      0.28   10.9   1.5   1   1   0.00042      0.56    9.9   0.0   106   155   108   158   100   159 0.82 FAD-NAD(P)-binding
TroA                 PF01297.12   256 sp|O34385|MNTA_BACSU -            306   3.9e-69  232.7   0.2   1   1   8.9e-73   4.4e-69  232.5   0.2     1   256    34   305    34   305 0.92 Periplasmic solute binding protein family
Ribosomal_L32e       PF01655.13   110 sp|O34385|MNTA_BACSU -            306     0.032   14.2   0.2   1   1   1.5e-05     0.074   13.1   0.0    59   108   221   270   158   271 0.73 Ribosomal protein L32
LPAM_2               PF13627.1     24 sp|O34385|MNTA_BACSU -            306       0.6    9.8   3.7   1   1   0.00019      0.95    9.2   3.7     3    16     7    20     5    21 0.91 Prokaryotic lipoprotein-attachment site
ABC_tran             PF00005.22   137 sp|O34338|MNTB_BACSU -            250   6.4e-32  110.7   0.0   1   1     2e-34   9.3e-32  110.1   0.0     1   137    19   165    19   165 0.89 ABC transporter
AAA_21               PF13304.1    303 sp|O34338|MNTB_BACSU -            250   2.3e-13   50.7   0.0   1   1     3e-13   1.4e-10   41.6   0.0     2   294    32   191    31   196 0.89 AAA domain
AAA_16               PF13191.1    185 sp|O34338|MNTB_BACSU -            250   4.4e-07   30.0   0.0   1   1   1.8e-09   8.5e-07   29.1   0.0    23   163    28   200    18   248 0.80 AAA ATPase domain
SMC_N                PF02463.14   220 sp|O34338|MNTB_BACSU -            250   4.9e-07   29.2   0.2   1   2   4.1e-05     0.019   14.2   0.0    25    45    30    50     8    58 0.84 RecF/RecN/SMC N terminal domain
SMC_N                PF02463.14   220 sp|O34338|MNTB_BACSU -            250   4.9e-07   29.2   0.2   2   2   7.9e-05     0.036   13.2   0.0   134   202   134   199    99   210 0.82 RecF/RecN/SMC N terminal domain
AAA_23               PF13476.1    202 sp|O34338|MNTB_BACSU -            250   9.9e-05   22.7   0.0   1   1   4.4e-07   0.00021   21.7   0.0    14    39    21    49    13    81 0.87 AAA domain
SbcCD_C              PF13558.1     90 sp|O34338|MNTB_BACSU -            250   0.00016   21.5   0.5   1   1     3e-06    0.0014   18.4   0.5    21    89   125   180   110   181 0.76 Putative exonuclease SbcCD, C subunit
Arch_ATPase          PF01637.13   234 sp|O34338|MNTB_BACSU -            250   0.00045   19.9   0.1   1   2   0.00037      0.17   11.5   0.0    21    58    30    68    19    75 0.80 Archaeal ATPase
AAA_29               PF13555.1     62 sp|O34338|MNTB_BACSU -            250   0.00048   19.6   0.1   1   1   2.8e-06    0.0013   18.2   0.1    22    43    28    49    19    58 0.80 P-loop containing region of AAA domain
AAA_15               PF13175.1    415 sp|O34338|MNTB_BACSU -            250   0.00054   19.1   0.0   1   2   9.9e-05     0.046   12.7   0.0    18    43    22    59     8   120 0.81 AAA ATPase domain
DUF258               PF03193.11   161 sp|O34338|MNTB_BACSU -            250    0.0011   18.1   0.0   1   1   4.2e-06    0.0019   17.3   0.0    16    67     9    61     3    82 0.82 Protein of unknown function, DUF258
AAA_25               PF13481.1    194 sp|O34338|MNTB_BACSU -            250    0.0015   17.9   0.1   1   2   0.00018     0.083   12.2   0.0    30    54    26    50    14    77 0.86 AAA domain
MobB                 PF03205.9    140 sp|O34338|MNTB_BACSU -            250    0.0022   17.7   1.2   1   2   0.00019     0.086   12.5   0.1     2    21    31    50    30    63 0.88 Molybdopterin guanine dinucleotide synthesis protein B
ArgK                 PF03308.11   267 sp|O34338|MNTB_BACSU -            250    0.0043   15.8   0.1   1   1   1.9e-05    0.0088   14.8   0.0    15    51    15    51     4    70 0.83 ArgK protein
AAA_10               PF12846.2    304 sp|O34338|MNTB_BACSU -            250    0.0056   16.1   0.1   1   1   2.1e-05    0.0095   15.3   0.1     5    40    33    70    30   104 0.86 AAA-like domain
MMR_HSR1             PF01926.18   116 sp|O34338|MNTB_BACSU -            250     0.015   15.2   0.8   1   1   6.1e-05     0.028   14.3   0.8     2    21    32    51    31   206 0.85 50S ribosome-binding GTPase
MutS_V               PF00488.16   235 sp|O34338|MNTB_BACSU -            250     0.019   14.4   0.0   1   1   0.00016     0.073   12.4   0.0    28    63    14    49     6    54 0.87 MutS domain V
AAA_17               PF13207.1    121 sp|O34338|MNTB_BACSU -            250     0.025   15.4   1.7   1   1    0.0002     0.094   13.5   0.6     1    17    31    47    31    56 0.92 AAA domain
Resolvase            PF00239.16   141 sp|O34338|MNTB_BACSU -            250     0.032   14.0   0.0   1   1    0.0001     0.047   13.5   0.0    14    80   140   207   129   230 0.75 Resolvase, N terminal domain
NB-ARC               PF00931.17   287 sp|O34338|MNTB_BACSU -            250     0.035   12.9   0.1   1   1   0.00014     0.066   12.0   0.1     3    40    13    50    11    52 0.88 NB-ARC domain
NTPase_1             PF03266.10   168 sp|O34338|MNTB_BACSU -            250     0.048   13.3   0.0   1   1   0.00044       0.2   11.3   0.0     2    47    32    76    31    78 0.80 NTPase
T2SE                 PF00437.15   272 sp|O34338|MNTB_BACSU -            250     0.059   12.2   0.0   1   1   0.00021     0.099   11.5   0.0   121   159    22    60     5    63 0.81 Type II/IV secretion system protein
AAA_33               PF13671.1    143 sp|O34338|MNTB_BACSU -            250     0.061   13.1   0.1   1   1   0.00016     0.076   12.8   0.1     3    20    33    50    31   201 0.83 AAA domain
Miro                 PF08477.8    119 sp|O34338|MNTB_BACSU -            250     0.062   13.7   0.1   1   1   0.00025      0.12   12.9   0.1     2    25    32    55    31   192 0.82 Miro-like protein
AAA_19               PF13245.1     76 sp|O34338|MNTB_BACSU -            250      0.07   12.8   0.3   1   1   0.00062      0.29   10.9   0.1    10    36    29    64    22    82 0.71 Part of AAA domain
AAA_22               PF13401.1    131 sp|O34338|MNTB_BACSU -            250     0.077   13.1   0.1   1   1   0.00066       0.3   11.2   0.1     6    25    31    50    25    67 0.87 AAA domain
Zeta_toxin           PF06414.7    201 sp|O34338|MNTB_BACSU -            250     0.081   12.0   0.1   1   1   0.00037      0.17   10.9   0.0    18    55    31    69    20    85 0.87 Zeta toxin
Mg_chelatase         PF01078.16   207 sp|O34338|MNTB_BACSU -            250      0.12   11.5   0.3   1   1   0.00056      0.26   10.4   0.1    27    50    34    57    22    65 0.89 Magnesium chelatase, subunit ChlI
RNA_helicase         PF00910.17   107 sp|O34338|MNTB_BACSU -            250      0.12   12.5   0.0   1   1    0.0011      0.49   10.5   0.0     3    61    34    90    32   127 0.70 RNA helicase
AAA_14               PF13173.1    128 sp|O34338|MNTB_BACSU -            250      0.16   11.8   0.5   1   1   0.00093      0.43   10.4   0.1     2    23    29    50    28    73 0.87 AAA domain
cobW                 PF02492.14   178 sp|O34338|MNTB_BACSU -            250      0.21   11.0   0.7   1   1   0.00086       0.4   10.1   0.2     3    21    32    50    30    63 0.84 CobW/HypB/UreG, nucleotide-binding domain
ABC-3                PF00950.12   258 sp|O35024|MNTC_BACSU -            435     2e-85  286.1  28.9   1   1   4.9e-89   2.4e-85  285.9  28.9     2   257    11   276    10   277 0.99 ABC 3 transport family
FecCD                PF01032.13   311 sp|O35024|MNTC_BACSU -            435   4.8e-07   28.9  32.1   1   1   1.3e-10   6.5e-07   28.4  32.1    83   301    51   269    14   277 0.82 FecCD transport family
ABC-3                PF00950.12   258 sp|O34500|MNTD_BACSU -            295     2e-44  151.8  38.9   1   1   7.8e-48   5.8e-44  150.3  38.9     7   256     6   272     1   275 0.89 ABC 3 transport family
FecCD                PF01032.13   311 sp|O34500|MNTD_BACSU -            295   7.6e-07   28.2  36.7   1   1   8.2e-10   6.1e-06   25.2  36.7    79   305    37   271     8   274 0.77 FecCD transport family
Nramp                PF01566.13   358 sp|P96593|MNTH_BACSU -            425  4.5e-116  387.5  26.3   1   1  9.1e-120  6.8e-116  386.9  26.3     1   357    50   398    50   399 0.98 Natural resistance-associated macrophage protein
DUF204               PF02659.10    67 sp|P39154|MNTP_BACSU -            185   3.3e-35  120.0  28.0   1   2   1.1e-22   8.5e-19   67.4  12.8     1    67    19    85    19    85 0.99 Domain of unknown function DUF
DUF204               PF02659.10    67 sp|P39154|MNTP_BACSU -            185   3.3e-35  120.0  28.0   2   2   7.6e-20   5.6e-16   58.4   7.3     1    67   115   178   115   178 0.99 Domain of unknown function DUF
Mob_synth_C          PF06463.8    128 sp|P39757|MOAA_BACSU -            341   2.3e-35  121.0   0.0   1   1   1.2e-38   3.5e-35  120.4   0.0     2   127   194   320   193   321 0.97 Molybdenum Cofactor Synthesis C
Radical_SAM          PF04055.16   166 sp|P39757|MOAA_BACSU -            341   1.4e-32  113.1   0.0   1   1   7.8e-36   2.3e-32  112.4   0.0     1   165    21   187    21   188 0.97 Radical SAM superfamily
Fer4_12              PF13353.1    139 sp|P39757|MOAA_BACSU -            341   1.6e-07   31.5   0.0   1   1   1.3e-10   3.9e-07   30.2   0.0    13   117    25   133    16   151 0.77 4Fe-4S single cluster domain
Fer4_14              PF13394.1    119 sp|P39757|MOAA_BACSU -            341   1.8e-07   31.2   0.0   1   1   1.8e-10   5.3e-07   29.6   0.0     5    92    24   112    22   134 0.70 4Fe-4S single cluster domain
SopE_GEF             PF07487.8    165 sp|P39757|MOAA_BACSU -            341     0.063   13.2   0.0   1   1     3e-05     0.089   12.7   0.0    16    83   100   169    90   239 0.82 SopE GEF domain
MoCF_biosynth        PF00994.19   144 sp|O34457|MOAB_BACSU -            170   1.5e-32  111.9   0.3   1   1   1.2e-36   1.7e-32  111.7   0.3     2   144    18   161    17   161 0.93 Probable molybdopterin binding domain
MoaC                 PF01967.16   136 sp|O05520|MOAC_BACSU -            170     4e-56  188.4   3.2   1   1   3.1e-60   4.5e-56  188.2   3.2     1   136    15   152    15   152 0.96 MoaC family
ThiS                 PF02597.15    77 sp|O31706|MOAD_BACSU -             77   7.4e-17   61.5   0.1   1   1   1.1e-20   8.2e-17   61.3   0.1     1    77     4    77     4    77 0.96 ThiS family
DUF1899              PF08953.6     65 sp|O31706|MOAD_BACSU -             77     0.023   14.3   0.1   1   1   4.4e-06     0.032   13.8   0.1    32    60    44    72    40    77 0.91 Domain of unknown function (DUF1899)
MoaE                 PF02391.12   117 sp|O31705|MOAE_BACSU -            157     7e-44  148.3   1.8   1   1   1.8e-47     9e-44  148.0   1.8     2   116     4   118     3   119 0.98 MoaE protein
SsgA                 PF04686.7    100 sp|O31705|MOAE_BACSU -            157     0.039   13.6   0.0   1   1   0.00016       0.8    9.4   0.0     4    34    45    75    42   121 0.77 Streptomyces sporulation and cell division protein, SsgA
Baculo_E25           PF05274.6    182 sp|O31705|MOAE_BACSU -            157       0.1   12.1   0.0   1   1   3.5e-05      0.17   11.4   0.0    39    75     4    41     1    59 0.83 Occlusion-derived virus envelope protein E25
NTP_transf_3         PF12804.2    160 sp|O31701|MOBA_BACSU -            199   1.8e-23   83.3   0.0   1   1   1.5e-27   2.3e-23   83.0   0.0     2   148     6   149     5   159 0.84 MobA-like NTP transferase domain
MobB                 PF03205.9    140 sp|O31704|MOBB_BACSU -            173   1.1e-35  122.3   0.0   1   1   8.6e-39   1.4e-35  122.0   0.0     1   126     8   133     8   150 0.89 Molybdopterin guanine dinucleotide synthesis protein B
MMR_HSR1             PF01926.18   116 sp|O31704|MOBB_BACSU -            173    0.0021   18.0   0.0   1   1   1.6e-06    0.0026   17.7   0.0     3    38    11    46     9   148 0.67 50S ribosome-binding GTPase
cobW                 PF02492.14   178 sp|O31704|MOBB_BACSU -            173    0.0035   16.8   0.1   1   1   4.2e-06    0.0069   15.8   0.1     1    34     8    42     8   154 0.61 CobW/HypB/UreG, nucleotide-binding domain
AAA_33               PF13671.1    143 sp|O31704|MOBB_BACSU -            173     0.011   15.6   0.0   1   1     9e-06     0.015   15.1   0.0     2    28    10    38     9    96 0.90 AAA domain
Dynamin_N            PF00350.18   168 sp|O31704|MOBB_BACSU -            173     0.012   15.4   0.0   1   1   1.3e-05     0.022   14.5   0.0     2    21    11    30    10    35 0.90 Dynamin family
Arch_ATPase          PF01637.13   234 sp|O31704|MOBB_BACSU -            173     0.018   14.7   0.0   1   1   1.3e-05     0.021   14.5   0.0    19    49     6    36     2   105 0.81 Archaeal ATPase
Miro                 PF08477.8    119 sp|O31704|MOBB_BACSU -            173     0.045   14.2   0.0   1   1   4.9e-05     0.081   13.4   0.0     2    26    10    50    10   100 0.73 Miro-like protein
NTPase_1             PF03266.10   168 sp|O31704|MOBB_BACSU -            173     0.081   12.6   0.0   1   1   8.3e-05      0.14   11.8   0.0     4    31    12    39     9    46 0.88 NTPase
ATP_bind_1           PF03029.12   238 sp|O31704|MOBB_BACSU -            173      0.13   11.7   0.1   1   2   0.00026      0.43   10.0   0.0     1    27    12    38    12    41 0.89 Conserved hypothetical ATP binding protein
MoeA_N               PF03453.12   162 sp|O31703|MOEA_BACSU -            430   6.3e-53  178.4   0.0   1   1   2.2e-56   1.1e-52  177.6   0.0     2   162     8   176     7   176 0.98 MoeA N-terminal region (domain I and II)
MoCF_biosynth        PF00994.19   144 sp|O31703|MOEA_BACSU -            430   4.5e-27   94.2   0.1   1   2     4e-30     2e-26   92.1   0.0     1   143   189   326   189   327 0.93 Probable molybdopterin binding domain
MoeA_C               PF03454.10    72 sp|O31703|MOEA_BACSU -            430   2.7e-21   75.3   0.0   3   3   4.8e-24   2.4e-20   72.2   0.0     2    72   341   411   340   411 0.98 MoeA C-terminal region (domain IV)
ThiF                 PF00899.16   136 sp|O31702|MOEB_BACSU -            339   2.1e-43  147.4   0.1   1   1   3.6e-46   3.5e-43  146.6   0.1     2   134    24   158    23   160 0.96 ThiF family
MoeZ_MoeB            PF05237.8     84 sp|O31702|MOEB_BACSU -            339   1.7e-25   88.4   0.1   1   1   3.7e-28   3.6e-25   87.3   0.1     1    83   162   246   162   247 0.93 MoeZ/MoeB domain
Shikimate_DH         PF01488.15   135 sp|O31702|MOEB_BACSU -            339   1.3e-06   28.5   0.4   1   2   3.8e-08   3.8e-05   23.8   0.1     8    56    20    68    13   101 0.82 Shikimate / quinate 5-dehydrogenase
NAD_binding_7        PF13241.1    103 sp|O31702|MOEB_BACSU -            339   3.6e-06   27.1   0.0   1   1   7.9e-09   7.8e-06   26.0   0.0     5    85    22   141    20   158 0.68 Putative NAD(P)-binding
Saccharop_dh         PF03435.13   386 sp|O31702|MOEB_BACSU -            339   2.3e-05   23.5   0.3   1   1   4.2e-08   4.2e-05   22.7   0.3     1    92    27   142    27   156 0.89 Saccharopine dehydrogenase
TrkA_N               PF02254.13   116 sp|O31702|MOEB_BACSU -            339   0.00074   19.5   0.7   1   2   0.00022      0.22   11.5   0.1     1    38    27    65    27    76 0.81 TrkA-N domain
ApbA                 PF02558.11   151 sp|O31702|MOEB_BACSU -            339    0.0016   17.9   0.0   1   1   3.8e-06    0.0037   16.6   0.0     1    74    27   123    27   142 0.64 Ketopantoate reductase PanE/ApbA
FAD_binding_3        PF01494.14   356 sp|O31702|MOEB_BACSU -            339     0.003   16.6   0.1   1   1   5.1e-06     0.005   15.9   0.1     2    33    25    57    24    74 0.86 FAD binding domain
DAO                  PF01266.19   358 sp|O31702|MOEB_BACSU -            339    0.0034   16.3   0.0   1   1   4.7e-06    0.0046   15.9   0.0     1    38    26    62    26   151 0.80 FAD dependent oxidoreductase
2-Hacid_dh_C         PF02826.14   178 sp|O31702|MOEB_BACSU -            339    0.0047   16.1   1.4   1   2   8.4e-05     0.083   12.0   0.2    16    69     7    58     2    78 0.74 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain
NAD_Gly3P_dh_N       PF01210.18   157 sp|O31702|MOEB_BACSU -            339     0.032   13.9   0.1   1   1   5.8e-05     0.058   13.1   0.1     2   117    27   136    26   150 0.83 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus
3HCDH_N              PF02737.13   180 sp|O31702|MOEB_BACSU -            339     0.048   13.3   0.2   1   1   8.1e-05      0.08   12.5   0.2     1    77    26   102    26   134 0.59 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain
Malic_M              PF03949.10   255 sp|O31702|MOEB_BACSU -            339     0.055   13.0   0.1   1   1   0.00011       0.1   12.1   0.1    20   137    19   145    15   148 0.79 Malic enzyme, NAD binding domain
F420_oxidored        PF03807.12    96 sp|O31702|MOEB_BACSU -            339     0.062   13.7   0.4   1   1   0.00014      0.14   12.5   0.4     4    94    29   124    26   126 0.79 NADP oxidoreductase coenzyme F420-dependent
DapB_N               PF01113.15   124 sp|O31702|MOEB_BACSU -            339      0.09   12.6   0.3   1   1   0.00023      0.23   11.3   0.3    51    97    95   147    26   154 0.74 Dihydrodipicolinate reductase, N-terminus
MotA_ExbB            PF01618.11   139 sp|P28611|MOTA_BACSU -            270   7.9e-30  103.3   0.3   2   2   5.3e-33   7.9e-30  103.3   0.3     2   138    92   223    91   224 0.97 MotA/TolQ/ExbB proton channel family
UPF0104              PF03706.8    294 sp|P28611|MOTA_BACSU -            270    0.0033   16.7   4.0   1   2   0.00033      0.48    9.6   2.3   109   198     3    95     1   101 0.61 Uncharacterised protein family (UPF0104)
DUF1772              PF08592.6    139 sp|P28611|MOTA_BACSU -            270     0.054   13.2   2.0   2   2   0.00049      0.73    9.5   0.1    24    93   141   208   135   224 0.72 Domain of unknown function (DUF1772)
MtrC                 PF04211.8    262 sp|P28611|MOTA_BACSU -            270     0.069   12.1   7.2   2   2   0.00016      0.23   10.4   0.2    69   119   151   201   144   234 0.78 Tetrahydromethanopterin S-methyltransferase, subunit C
5TM-5TMR_LYT         PF07694.7    169 sp|P28611|MOTA_BACSU -            270     0.087   12.1   7.1   1   2    0.0003      0.44    9.8   1.7    58   104     7    53     3    69 0.55 5TMR of 5TMR-LYT
FUSC_2               PF13515.1    128 sp|P28611|MOTA_BACSU -            270      0.37   10.7   8.7   2   2   0.00021      0.31   10.9   0.9    17    57   164   204   145   209 0.80 Fusaric acid resistance protein-like
DUF4131              PF13567.1    176 sp|P28611|MOTA_BACSU -            270      0.41   10.0   0.0   2   2   0.00028      0.41   10.0   0.0     9    84   147   227   142   254 0.63 Domain of unknown function (DUF4131)
RseC_MucC            PF04246.7    135 sp|P28611|MOTA_BACSU -            270      0.46   10.0   5.5   2   2   0.00032      0.47   10.0   0.1    81   131   158   218   143   222 0.73 Positive regulator of sigma(E), RseC/MucC
DUF202               PF02656.10    73 sp|P28611|MOTA_BACSU -            270       2.1    8.6   9.6   2   2   0.00057      0.84    9.8   0.3    20    68   157   205   153   210 0.82 Domain of unknown function (DUF202)
MotB_plug            PF13677.1     58 sp|P28612|MOTB_BACSU -            261   2.5e-20   71.5   0.5   1   1   1.2e-23   2.5e-20   71.5   0.5     1    57     1    58     1    59 0.91 Membrane MotB of proton-channel complex MotA/MotB
OmpA                 PF00691.15    97 sp|P28612|MOTB_BACSU -            261   5.2e-14   52.4   0.0   1   1   5.2e-17   1.1e-13   51.3   0.0     1    97   144   244   144   244 0.91 OmpA family
DUF1980              PF09323.5    182 sp|P28612|MOTB_BACSU -            261     0.009   15.7   8.3   2   2     9e-05      0.19   11.4   0.0    71   120   189   240   173   250 0.77 Domain of unknown function (DUF1980)
Pro_CA               PF00484.14   153 sp|P28612|MOTB_BACSU -            261     0.057   13.4   0.3   1   2   0.00012      0.26   11.3   0.6    89   149    81   140    65   143 0.69 Carbonic anhydrase
FlaG                 PF03646.10   108 sp|P28612|MOTB_BACSU -            261     0.063   13.4   8.5   1   1     6e-05      0.13   12.4   8.5    10    76    76   142    68   143 0.74 FlaG protein
SPT16                PF08644.6    152 sp|P28612|MOTB_BACSU -            261      0.09   12.6   3.2   1   1     8e-05      0.17   11.7   3.2    86   136    79   129    67   138 0.83 FACT complex subunit (SPT16/CDC68)
ExbD                 PF02472.11   130 sp|P28612|MOTB_BACSU -            261       0.2   11.6   4.8   1   1   0.00036      0.76    9.7   4.8     3    48    12    57    10   182 0.73 Biopolymer transport protein ExbD/TolR
Bac_luciferase       PF00296.15   307 sp|O34974|MOXC_BACSU -            442   2.1e-62  211.0   0.0   1   1   1.9e-66   2.8e-62  210.5   0.0     9   302    23   379    15   385 0.86 Luciferase-like monooxygenase
DUF2156              PF09924.4    299 sp|C0H3X7|MPRF_BACSU -            856  6.1e-100  333.9   0.8   1   1  1.6e-103    8e-100  333.5   0.8     3   299   540   831   538   831 0.99 Uncharacterized conserved protein (DUF2156)
UPF0104              PF03706.8    294 sp|C0H3X7|MPRF_BACSU -            856   2.2e-15   56.7  18.8   1   1   4.5e-19   2.2e-15   56.7  18.8     4   294    21   296    17   296 0.74 Uncharacterised protein family (UPF0104)
Trypsin              PF00089.21   220 sp|P39790|MPR_BACSU  -            313   1.7e-25   89.8   4.1   2   2   2.3e-29   1.7e-25   89.8   4.1     8   214   106   308    95   312 0.86 Trypsin
Trypsin_2            PF13365.1    120 sp|P39790|MPR_BACSU  -            313   1.8e-08   34.3   0.1   1   1   4.8e-12   3.6e-08   33.4   0.1     1   112   131   273   131   282 0.78 Trypsin-like peptidase domain
Glycos_transf_4      PF00953.16   159 sp|Q03521|MRAY_BACSU -            324   3.2e-39  134.3  19.4   2   3   6.4e-43   3.2e-39  134.3  19.4     2   158    82   248    81   249 0.94 Glycosyl transferase family 4
MraY_sig1            PF10555.4     13 sp|Q03521|MRAY_BACSU -            324   4.5e-05   22.4   4.1   1   2   9.1e-09   4.5e-05   22.4   4.1     1    13    48    60    48    60 0.98 Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1
VitK2_biosynth       PF02621.9    251 sp|Q03521|MRAY_BACSU -            324     0.002   17.3   0.1   1   1   6.4e-07    0.0031   16.7   0.1    40   110   179   250   176   254 0.92 Menaquinone biosynthesis
MraZ                 PF02381.13    72 sp|P55343|MRAZ_BACSU -            143   1.1e-55  185.3   0.1   1   2   5.8e-31   4.3e-27   93.6   0.0     1    72     1    71     1    71 0.99 MraZ protein
MraZ                 PF02381.13    72 sp|P55343|MRAZ_BACSU -            143   1.1e-55  185.3   0.1   2   2   7.1e-30   5.3e-26   90.1   0.0     1    71    72   141    72   142 0.97 MraZ protein
DUF2375              PF09558.5     71 sp|P55343|MRAZ_BACSU -            143     0.064   13.1   0.0   1   1     2e-05      0.15   11.9   0.0    30    46     9    25     3    32 0.89 Protein of unknown function (DUF2375)
MreB_Mbl             PF06723.8    327 sp|P39763|MREBH_BACSU -            335  1.7e-144  480.4  12.3   1   1  1.2e-147    2e-144  480.2  12.3     2   326     5   331     4   332 0.99 MreB/Mbl protein
HSP70                PF00012.15   602 sp|P39763|MREBH_BACSU -            335   1.6e-14   52.7   4.2   2   2   1.1e-16   1.9e-13   49.2   0.5   114   370    75   320    60   332 0.76 Hsp70 protein
Actin                PF00022.14   393 sp|P39763|MREBH_BACSU -            335     3e-14   52.2   0.0   1   2   1.3e-12   2.2e-09   36.2   0.0    31   230    30   258     5   261 0.76 Actin
Actin                PF00022.14   393 sp|P39763|MREBH_BACSU -            335     3e-14   52.2   0.0   2   2   1.8e-06     0.003   16.0   0.0   284   334   251   302   236   311 0.83 Actin
FtsA                 PF14450.1    120 sp|P39763|MREBH_BACSU -            335   9.2e-10   38.3   4.0   2   2   1.5e-11   2.5e-08   33.7   0.2     2    98   153   310   152   323 0.89 Cell division protein FtsA
PilM_2               PF11104.3    340 sp|P39763|MREBH_BACSU -            335   9.6e-09   34.5   0.0   2   2   1.2e-10     2e-07   30.2   0.0   181   316   151   321   111   333 0.84 Type IV pilus assembly protein PilM;
Ppx-GppA             PF02541.11   285 sp|P39763|MREBH_BACSU -            335   1.2e-05   24.6   0.0   1   1   1.2e-08   1.9e-05   24.0   0.0   112   199   150   243   132   270 0.81 Ppx/GppA phosphatase family
EutA                 PF06277.6    473 sp|P39763|MREBH_BACSU -            335   1.4e-05   23.8   0.2   2   2   8.7e-09   1.4e-05   23.8   0.2   146   222   153   225   136   262 0.75 Ethanolamine utilisation protein EutA
DDR                  PF08841.5    332 sp|P39763|MREBH_BACSU -            335   0.00045   19.1   0.9   1   2   1.6e-06    0.0027   16.5   0.3    94   162   111   177    77   215 0.81 Diol dehydratase reactivase ATPase-like domain
StbA                 PF06406.6    318 sp|P39763|MREBH_BACSU -            335     0.093   11.6   0.6   1   1   0.00011      0.19   10.6   0.6   140   182   126   168   111   313 0.82 StbA protein
MreB_Mbl             PF06723.8    327 sp|Q01465|MREB_BACSU -            337  6.5e-152  504.7  10.6   1   1  4.5e-155  7.4e-152  504.6  10.6     2   324     7   331     6   334 0.98 MreB/Mbl protein
FtsA                 PF14450.1    120 sp|Q01465|MREB_BACSU -            337   1.5e-09   37.7   5.4   2   2   1.6e-11   2.7e-08   33.6   1.0     2    98   155   312   154   323 0.91 Cell division protein FtsA
Actin                PF00022.14   393 sp|Q01465|MREB_BACSU -            337   2.5e-09   36.0   0.7   1   2   5.1e-08   8.3e-05   21.1   0.1    31   190    32   198    11   231 0.80 Actin
Actin                PF00022.14   393 sp|Q01465|MREB_BACSU -            337   2.5e-09   36.0   0.7   2   2     2e-05     0.033   12.6   0.0   285   333   252   303   238   308 0.83 Actin
HSP70                PF00012.15   602 sp|Q01465|MREB_BACSU -            337   5.6e-09   34.4   8.0   2   2   3.6e-11   5.9e-08   31.0   1.8   138   369   103   321    77   327 0.78 Hsp70 protein
PilM_2               PF11104.3    340 sp|Q01465|MREB_BACSU -            337   2.8e-07   29.7   0.0   2   2   5.8e-10   9.5e-07   28.0   0.0   182   313   154   320   114   330 0.86 Type IV pilus assembly protein PilM;
DDR                  PF08841.5    332 sp|Q01465|MREB_BACSU -            337   0.00067   18.5   1.8   1   2   2.8e-06    0.0046   15.8   0.6   118   170   136   188   114   214 0.84 Diol dehydratase reactivase ATPase-like domain
EutA                 PF06277.6    473 sp|Q01465|MREB_BACSU -            337    0.0075   14.9   1.1   2   2   4.5e-06    0.0075   14.9   1.1   147   202   156   208   150   236 0.79 Ethanolamine utilisation protein EutA
Hydantoinase_A       PF01968.13   290 sp|Q01465|MREB_BACSU -            337     0.026   13.6   1.2   1   2   0.00011      0.18   10.8   0.6    64   110   139   184   136   191 0.75 Hydantoinase/oxoprolinase
Ppx-GppA             PF02541.11   285 sp|Q01465|MREB_BACSU -            337     0.041   13.0   0.2   1   1   7.2e-05      0.12   11.5   0.2   112   139   152   179   135   184 0.75 Ppx/GppA phosphatase family
MreC                 PF04085.9    152 sp|Q01466|MREC_BACSU -            290   4.5e-47  159.2   3.9   1   1   2.1e-50   6.1e-47  158.8   3.9     1   151   118   278   118   279 0.95 rod shape-determining protein MreC
bZIP_1               PF00170.16    64 sp|Q01466|MREC_BACSU -            290     0.011   15.6   2.6   2   2   3.8e-06     0.011   15.6   2.6    24    54    78   108    74   113 0.87 bZIP transcription factor
DUF2951              PF11166.3     98 sp|Q01466|MREC_BACSU -            290       7.8    6.4   8.6   1   2   0.00025      0.73    9.7   1.2    23    73    58   113    53   121 0.71 Protein of unknown function (DUF2951)
MreD                 PF04093.7    160 sp|Q01467|MRED_BACSU -            172   7.1e-46  155.9  25.9   1   1   1.6e-49     8e-46  155.8  25.9     1   159     2   164     2   165 0.98 rod shape-determining protein MreD
Ferritin             PF00210.19   142 sp|P37960|MRGA_BACSU -            153     1e-27   96.5   0.4   1   1   1.6e-31   1.2e-27   96.4   0.4     2   136    15   152    14   153 0.95 Ferritin-like domain
DUF2372              PF10178.4     90 sp|P37960|MRGA_BACSU -            153     0.096   12.8   0.0   1   1     2e-05      0.15   12.2   0.0    27    88    80   141    53   143 0.84 Uncharacterised conserved protein (DUF2372)
Ribonuclease_3       PF00636.21   114 sp|O31418|MRNC_BACSU -            143   4.4e-18   65.7   0.1   1   1   7.5e-22   5.5e-18   65.4   0.1     2   113    17   116    16   117 0.94 Ribonuclease III domain
Ribonucleas_3_3      PF14622.1    128 sp|O31418|MRNC_BACSU -            143    0.0003   20.7   0.1   1   1   1.1e-07   0.00081   19.3   0.1    24   124    17   129     7   131 0.73 Ribonuclease-III-like
Oxidored_q1          PF00361.15   270 sp|Q9K2S2|MRPA_BACSU -            801     1e-65  221.6  28.2   2   3   2.1e-69     1e-65  221.6  28.2     2   270   130   412   129   412 0.94 NADH-Ubiquinone/plastoquinone (complex I), various chains
DUF4040              PF13244.1     71 sp|Q9K2S2|MRPA_BACSU -            801     4e-21   74.7  10.2   1   2   8.2e-25     4e-21   74.7  10.2     2    69   635   701   634   703 0.96 Domain of unknown function (DUF4040)
Oxidored_q1_N        PF00662.15    62 sp|Q9K2S2|MRPA_BACSU -            801   1.6e-06   27.5   2.0   1   1   9.3e-10   4.6e-06   26.0   0.2     6    61    63   117    59   118 0.83 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus
MnhB                 PF04039.8    124 sp|O05259|MRPB_BACSU -            143   4.3e-35  120.4  17.7   1   1   3.2e-39   4.8e-35  120.3  17.7     1   124     8   136     8   136 0.99 Domain related to MnhB subunit of Na+/H+ antiporter
Oxidored_q2          PF00420.19    95 sp|O05260|MRPC_BACSU -            113   1.3e-22   79.1   4.7   1   1   6.6e-26   1.6e-22   78.8   4.7     2    90     5   106     4   108 0.97 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L
DctQ                 PF04290.7    133 sp|O05260|MRPC_BACSU -            113      0.29   10.9   7.7   1   2   9.4e-05      0.23   11.2   2.0    24    68     2    46     1    57 0.92 Tripartite ATP-independent periplasmic transporters, DctQ component
MacB_PCD             PF12704.2    232 sp|O05260|MRPC_BACSU -            113      0.29   10.6   0.0   2   2   0.00012      0.29   10.6   0.0    13    35    73    95    70   111 0.80 MacB-like periplasmic core domain
PIRT                 PF15099.1    129 sp|O05260|MRPC_BACSU -            113      0.87    8.8   7.7   1   2    0.0004      0.99    8.6   5.5    60    98     7    47     3    53 0.87 Phosphoinositide-interacting protein family
Oxidored_q1          PF00361.15   270 sp|O05229|MRPD_BACSU -            493   2.5e-45  154.8  31.7   2   3   6.7e-49   2.5e-45  154.8  31.7     3   266   128   395   126   398 0.97 NADH-Ubiquinone/plastoquinone (complex I), various chains
NADHdeh_related      PF10125.4    219 sp|O05229|MRPD_BACSU -            493    0.0029   16.7  35.4   1   2     8e-07    0.0029   16.7  11.0    83   183   121   226   108   239 0.82 NADH dehydrogenase I, subunit N related protein
Pho86                PF11124.3    304 sp|O05229|MRPD_BACSU -            493      0.11   11.5   2.2   2   2   4.1e-05      0.15   11.0   0.8    84   150   258   321   242   333 0.83 Inorganic phosphate transporter Pho86
MNHE                 PF01899.11   156 sp|Q7WY60|MRPE_BACSU -            158   2.3e-47  160.5   0.9   1   1   5.4e-51   2.7e-47  160.3   0.9     1   155     7   156     7   157 0.97 Na+/H+ ion antiporter subunit
Wzy_C                PF04932.10   163 sp|Q7WY60|MRPE_BACSU -            158     0.012   15.3   2.7   1   1     3e-06     0.015   15.1   2.7     3    68     9    81     7   148 0.57 O-Antigen ligase
ATP_synt_I           PF03899.10   100 sp|Q7WY60|MRPE_BACSU -            158      0.03   14.4   9.3   1   1   1.5e-05     0.073   13.2   9.2     5    47     3    45     1    76 0.88 ATP synthase I chain
MrpF_PhaF            PF04066.8     55 sp|O05228|MRPF_BACSU -             94     2e-23   82.4   5.5   2   2   1.3e-27     2e-23   82.4   5.5     2    55    31    84    30    84 0.98 Multiple resistance and pH regulation protein F (MrpF / PhaF)
PhaG_MnhG_YufB       PF03334.9     81 sp|O05227|MRPG_BACSU -            124   8.9e-27   92.9   8.2   1   1   3.6e-30   1.1e-26   92.7   8.2     1    81    12    94    12    94 0.98 Na+/H+ antiporter subunit
ABC2_membrane_5      PF13346.1    206 sp|O05227|MRPG_BACSU -            124    0.0029   16.9   2.2   1   1   1.1e-06    0.0033   16.7   2.2    85   158     8    80     6   112 0.82 ABC-2 family transporter protein
PepSY_TM_3           PF13706.1     37 sp|O05227|MRPG_BACSU -            124     0.012   15.0   2.1   1   2     4e-06     0.012   15.0   2.1    13    26    51    64    50    67 0.93 PepSY-associated TM helix
Mem_trans            PF03547.13   385 sp|O05227|MRPG_BACSU -            124     0.092   11.0   1.4   1   1   3.7e-05      0.11   10.7   1.4   248   336    15    98     7   109 0.80 Membrane transport protein
SAYSvFN              PF10260.4     71 sp|O05227|MRPG_BACSU -            124      0.73    9.6   4.9   2   2   8.8e-05      0.26   11.0   1.1     1    26    55    80    55    86 0.93 Uncharacterized conserved domain (SAYSvFN)
MscL                 PF01741.13   128 sp|P94585|MSCL_BACSU -            130   6.7e-55  184.6   2.6   1   1   1.5e-58   7.6e-55  184.5   2.6     1   128     1   125     1   125 0.97 Large-conductance mechanosensitive channel, MscL
CoA_binding_3        PF13727.1    175 sp|P94585|MSCL_BACSU -            130     0.014   15.2   0.0   1   1   3.2e-06     0.016   15.0   0.0    32    98    52   120    24   129 0.85 CoA-binding domain
SBP_bac_1            PF01547.20   315 sp|O34335|MSME_BACSU -            426   9.6e-40  137.2   4.7   1   1   4.1e-43   1.5e-39  136.5   4.7     2   314    42   334    41   335 0.93 Bacterial extracellular solute-binding protein
SBP_bac_8            PF13416.1    281 sp|O34335|MSME_BACSU -            426   2.4e-26   93.1   7.1   1   1   8.5e-30   3.2e-26   92.7   7.1     1   277    50   360    50   364 0.75 Bacterial extracellular solute-binding protein
SBP_bac_11           PF13531.1    230 sp|O34335|MSME_BACSU -            426   0.00036   20.2   0.1   2   2   2.8e-05       0.1   12.1   0.1   132   221   232   334   188   341 0.57 Bacterial extracellular solute-binding protein
ABC_tran             PF00005.22   137 sp|P94360|MSMX_BACSU -            365   1.3e-28  100.0   0.0   1   1   2.8e-31   2.1e-28   99.3   0.0     2   136    21   162    20   163 0.97 ABC transporter
TOBE                 PF03459.12    64 sp|P94360|MSMX_BACSU -            365   4.3e-10   39.5   0.0   3   3   3.2e-09   2.4e-06   27.5   0.0     7    63   303   354   299   355 0.90 TOBE domain
AAA_21               PF13304.1    303 sp|P94360|MSMX_BACSU -            365   6.8e-09   36.0   0.0   1   1   2.9e-10   2.1e-07   31.1   0.0     1   298    32   194    32   199 0.96 AAA domain
TOBE_2               PF08402.5     75 sp|P94360|MSMX_BACSU -            365   8.2e-06   25.7   0.0   1   1   2.4e-08   1.8e-05   24.6   0.0     2    75   282   356   281   356 0.87 TOBE domain
SMC_N                PF02463.14   220 sp|P94360|MSMX_BACSU -            365   2.1e-05   23.8   0.2   1   1   9.4e-07    0.0007   18.8   0.2    23   216    29   210    20   215 0.64 RecF/RecN/SMC N terminal domain
AAA_33               PF13671.1    143 sp|P94360|MSMX_BACSU -            365   0.00078   19.3   0.1   1   1   8.9e-06    0.0066   16.3   0.2     2    24    33    52    32   206 0.74 AAA domain
AAA_18               PF13238.1    129 sp|P94360|MSMX_BACSU -            365   0.00082   19.6   0.1   1   1   3.8e-06    0.0028   17.9   0.0     1    42    33    84    33   191 0.85 AAA domain
DUF258               PF03193.11   161 sp|P94360|MSMX_BACSU -            365   0.00097   18.3   0.0   1   1   2.5e-06    0.0018   17.4   0.0    21    62    15    57     2    74 0.81 Protein of unknown function, DUF258
Rad17                PF03215.10   519 sp|P94360|MSMX_BACSU -            365    0.0016   17.1   0.0   1   1     3e-06    0.0022   16.7   0.0    39   111    24    96     8   125 0.72 Rad17 cell cycle checkpoint protein
AAA_22               PF13401.1    131 sp|P94360|MSMX_BACSU -            365    0.0021   18.2   0.1   1   1   5.1e-06    0.0038   17.3   0.1     3    27    29    53    26   191 0.91 AAA domain
AAA_15               PF13175.1    415 sp|P94360|MSMX_BACSU -            365    0.0022   17.1   0.0   2   2   6.7e-05      0.05   12.6   0.0   371   411   154   194   147   196 0.94 AAA ATPase domain
AAA_17               PF13207.1    121 sp|P94360|MSMX_BACSU -            365    0.0053   17.5   0.1   1   1   1.8e-05     0.014   16.2   0.1     2    39    33    71    32   195 0.78 AAA domain
AAA_23               PF13476.1    202 sp|P94360|MSMX_BACSU -            365    0.0072   16.6   0.0   1   1   2.7e-05      0.02   15.2   0.0     2    37     4    48     3    52 0.72 AAA domain
AAA_16               PF13191.1    185 sp|P94360|MSMX_BACSU -            365     0.013   15.5   0.0   1   1   3.6e-05     0.027   14.4   0.0    24    44    30    50    16    94 0.82 AAA ATPase domain
AAA                  PF00004.24   132 sp|P94360|MSMX_BACSU -            365     0.023   14.8   0.0   1   1   8.1e-05      0.06   13.5   0.0     1    21    33    53    33    93 0.68 ATPase family associated with various cellular activities (AAA)
RNA_helicase         PF00910.17   107 sp|P94360|MSMX_BACSU -            365     0.032   14.4   0.0   1   1   0.00017      0.13   12.4   0.0     1    39    33    66    33    74 0.76 RNA helicase
AAA_29               PF13555.1     62 sp|P94360|MSMX_BACSU -            365     0.045   13.2   0.0   1   1   0.00012     0.091   12.3   0.0    19    40    27    47    19    50 0.77 P-loop containing region of AAA domain
AAA_28               PF13521.1    163 sp|P94360|MSMX_BACSU -            365     0.086   12.8   0.2   1   1   0.00027       0.2   11.5   0.0     2    20    33    51    32    63 0.88 AAA domain
MobB                 PF03205.9    140 sp|P94360|MSMX_BACSU -            365     0.087   12.5   0.0   1   1   0.00032      0.24   11.0   0.0     3    21    33    51    31    57 0.91 Molybdopterin guanine dinucleotide synthesis protein B
AAA_10               PF12846.2    304 sp|P94360|MSMX_BACSU -            365     0.099   12.0   0.0   1   1   0.00025      0.19   11.1   0.0     4    28    33    58    31    76 0.82 AAA-like domain
PMSR                 PF01625.16   156 sp|P54154|MSRA_BACSU -            177   4.8e-60  201.9   0.5   1   1   3.8e-64   5.6e-60  201.7   0.5     2   155     7   161     6   162 0.98 Peptide methionine sulfoxide reductase
SelR                 PF01641.13   124 sp|P54155|MSRB_BACSU -            143   6.4e-54  180.9   0.0   1   1   5.3e-58   7.8e-54  180.6   0.0     2   123     6   125     5   126 0.96 SelR domain
Radical_SAM          PF04055.16   166 sp|P54462|MTAB_BACSU -            451   2.6e-31  109.0   0.1   1   1   1.8e-34   6.5e-31  107.7   0.1     2   166   148   319   147   319 0.87 Radical SAM superfamily
UPF0004              PF00919.15    98 sp|P54462|MTAB_BACSU -            451     3e-26   91.0   0.1   1   1   2.3e-29   8.5e-26   89.6   0.1     2    98     4    98     3    98 0.97 Uncharacterized protein family UPF0004
TRAM                 PF01938.15    61 sp|P54462|MTAB_BACSU -            451   3.2e-06   26.8   0.2   1   1     2e-09   7.3e-06   25.6   0.2    17    53   392   428   374   436 0.84 TRAM domain
IPPT                 PF01715.12   253 sp|P54462|MTAB_BACSU -            451    0.0077   15.2   0.1   1   1   3.6e-06     0.013   14.4   0.1    19    80   352   415   340   426 0.87 IPP transferase
DNA_methylase        PF00145.12   335 sp|P68585|MTBP_BACSU -            443   4.3e-81  272.6   4.8   1   2   4.5e-27   8.4e-24   84.3   0.1     1    85     4    92     4   100 0.96 C-5 cytosine-specific DNA methylase
DNA_methylase        PF00145.12   335 sp|P68585|MTBP_BACSU -            443   4.3e-81  272.6   4.8   2   2     4e-59   7.5e-56  189.6   1.6    82   334   122   434   117   435 0.89 C-5 cytosine-specific DNA methylase
Zn-ribbon_8          PF09723.5     42 sp|P68585|MTBP_BACSU -            443     0.011   15.6   3.4   1   1   1.3e-05     0.024   14.5   3.4     5    34    91   119    91   124 0.91 Zinc ribbon domain
TF_Zn_Ribbon         PF08271.7     43 sp|P68585|MTBP_BACSU -            443     0.019   14.3   0.9   1   1   2.1e-05     0.039   13.2   0.9     1    29    92   121    92   125 0.87 TFIIB zinc-binding
zf-DNL               PF05180.7     66 sp|P68585|MTBP_BACSU -            443     0.031   13.9   0.6   1   1     4e-05     0.074   12.7   0.6     3    47    90   129    89   143 0.83 DNL zinc finger
Zn_Tnp_IS91          PF14319.1    111 sp|P68585|MTBP_BACSU -            443     0.041   13.3   1.0   1   1   4.6e-05     0.085   12.3   1.0    40    72    89   123    83   127 0.79 Transposase zinc-binding domain
Mannitol_dh_C        PF08125.8    245 sp|P42957|MTLD_BACSU -            373   2.2e-70  236.6   0.0   1   1     6e-74     3e-70  236.1   0.0     2   239   148   361   147   366 0.97 Mannitol dehydrogenase C-terminal domain
Mannitol_dh          PF01232.18   151 sp|P42957|MTLD_BACSU -            373   1.4e-28   99.7   0.0   1   2     5e-31   2.5e-27   95.6   0.0     2   151     2   122     1   122 0.97 Mannitol dehydrogenase Rossmann domain
UDPG_MGDP_dh_N       PF03721.9    185 sp|P42957|MTLD_BACSU -            373    0.0081   15.5   0.0   1   1   2.7e-06     0.013   14.8   0.0     6    52     6    53     2    95 0.82 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain
PRD                  PF00874.15    89 sp|P96574|MTLR_BACSU -            694   8.6e-42  141.1   7.2   1   2   4.5e-23   2.8e-20   72.2   1.1     2    89   206   293   205   293 0.96 PRD domain
PRD                  PF00874.15    89 sp|P96574|MTLR_BACSU -            694   8.6e-42  141.1   7.2   2   2     1e-22   6.4e-20   71.0   0.6     2    89   316   403   315   403 0.98 PRD domain
HTH_11               PF08279.7     55 sp|P96574|MTLR_BACSU -            694   2.8e-16   58.8   4.9   1   3   1.4e-11   8.5e-09   34.9   0.4     1    53     6    62     6    64 0.92 HTH domain
HTH_11               PF08279.7     55 sp|P96574|MTLR_BACSU -            694   2.8e-16   58.8   4.9   2   3   9.8e-08   6.1e-05   22.5   0.0     4    53    92   145    90   149 0.78 HTH domain
Mga                  PF05043.8     87 sp|P96574|MTLR_BACSU -            694   3.4e-14   52.8   0.4   1   2   2.7e-08   1.7e-05   25.0   0.1    20    70     9    60     1    68 0.87 Mga helix-turn-helix domain
Mga                  PF05043.8     87 sp|P96574|MTLR_BACSU -            694   3.4e-14   52.8   0.4   2   2   3.1e-08   1.9e-05   24.8   0.0    13    80    88   158    75   164 0.82 Mga helix-turn-helix domain
HTH_DeoR             PF08220.7     57 sp|P96574|MTLR_BACSU -            694     5e-09   35.5   1.3   1   2     6e-08   3.7e-05   23.1   0.6     1    38     6    44     6    47 0.86 DeoR-like helix-turn-helix domain
HTH_DeoR             PF08220.7     57 sp|P96574|MTLR_BACSU -            694     5e-09   35.5   1.3   2   2   0.00067      0.42   10.1   0.0     5    40    96   131    93   145 0.92 DeoR-like helix-turn-helix domain
PTS_IIB              PF02302.12    90 sp|P96574|MTLR_BACSU -            694   1.2e-07   32.1   0.0   1   1   6.4e-10   3.9e-07   30.4   0.0     1    87   414   490   414   494 0.78 PTS system, Lactose/Cellobiose specific IIB subunit
PTS_EIIA_2           PF00359.17   144 sp|P96574|MTLR_BACSU -            694   3.3e-07   30.1   0.0   1   1   2.5e-09   1.6e-06   27.9   0.0    17   125   552   665   540   683 0.81 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2
HTH_Mga              PF08280.6     59 sp|P96574|MTLR_BACSU -            694   1.3e-05   24.8   6.5   1   2   1.1e-06   0.00069   19.3   1.2     5    57     5    57     4    58 0.90 M protein trans-acting positive regulator (MGA) HTH domain
MarR                 PF01047.17    59 sp|P96574|MTLR_BACSU -            694   0.00017   21.1   0.7   2   2   0.00014     0.084   12.5   0.0    11    43    99   131    90   132 0.86 MarR family
HTH_5                PF01022.15    47 sp|P96574|MTLR_BACSU -            694   0.00045   19.8   2.7   2   2   2.1e-05     0.013   15.1   0.3     1    41    89   131    89   131 0.93 Bacterial regulatory protein, arsR family
Fe_dep_repress       PF01325.14    60 sp|P96574|MTLR_BACSU -            694    0.0021   17.9   0.0   2   2   0.00077      0.48   10.4   0.0    15    48    98   131    93   132 0.93 Iron dependent repressor, N-terminal DNA binding domain
HTH_20               PF12840.2     61 sp|P96574|MTLR_BACSU -            694    0.0062   16.3   2.7   2   2    0.0015      0.95    9.3   0.1    16    50    97   131    93   131 0.91 Helix-turn-helix domain
HTH_Tnp_ISL3         PF13542.1     52 sp|P96574|MTLR_BACSU -            694     0.022   13.9   0.2   1   1   8.6e-05     0.053   12.6   0.0    23    50    15    43    13    45 0.91 Helix-turn-helix domain of transposase family ISL3
HTH_38               PF13936.1     44 sp|P96574|MTLR_BACSU -            694     0.026   14.0   0.8   1   1   0.00016       0.1   12.1   0.1    21    42    21    42     7    43 0.87 Helix-turn-helix domain
HTH_17               PF12728.2     51 sp|P96574|MTLR_BACSU -            694     0.044   14.0   1.5   1   1   0.00014     0.084   13.1   0.1     1    22    20    41    20    48 0.88 Helix-turn-helix domain
Sigma70_ECF          PF07638.6    185 sp|P96574|MTLR_BACSU -            694     0.066   12.8   0.0   1   1   0.00033      0.21   11.2   0.0   153   176    22    45     7    51 0.89 ECF sigma factor
Flavodoxin_5         PF12724.2    143 sp|P96574|MTLR_BACSU -            694     0.071   13.1   0.0   1   1   0.00033      0.21   11.6   0.0     1    59   416   474   416   490 0.91 Flavodoxin domain
HTH_23               PF13384.1     50 sp|P96574|MTLR_BACSU -            694     0.095   12.3   0.1   1   1   0.00038      0.24   11.1   0.1    12    39    13    42     3    45 0.80 Homeodomain-like domain
HTH_24               PF13412.1     48 sp|P96574|MTLR_BACSU -            694      0.12   11.7   2.3   1   1   0.00039      0.24   10.8   0.5     3    39     5    42     3    45 0.86 Winged helix-turn-helix DNA-binding
DUF552               PF04472.7     73 sp|P96574|MTLR_BACSU -            694      0.13   12.2   0.1   1   1   0.00055      0.34   10.8   0.1     2    39   477   514   476   534 0.89 Protein of unknown function (DUF552)
IF-2B                PF01008.12   282 sp|O31662|MTNA_BACSU -            353   1.3e-97  326.1   0.1   1   1  3.2e-101   1.6e-97  325.9   0.1     1   281    49   336    49   337 0.99 Initiation factor 2 subunit family
Glyco_transf_28      PF03033.15   139 sp|O31662|MTNA_BACSU -            353     0.013   15.2   0.0   2   3   2.6e-05      0.13   12.0   0.0    19    63   205   248   198   257 0.87 Glycosyltransferase family 28 N-terminal domain
Imm42                PF15601.1    134 sp|O31662|MTNA_BACSU -            353     0.076   12.4   0.1   1   1   3.3e-05      0.16   11.3   0.1    47   102    68   125    63   136 0.90 Immunity protein 42
Aldolase_II          PF00596.16   184 sp|O31668|MTNB_BACSU -            209   6.1e-38  130.2   0.0   1   1   4.6e-42   6.9e-38  130.0   0.0     1   182     9   196     9   198 0.86 Class II Aldolase and Adducin N-terminal domain
ARD                  PF03079.9    157 sp|O31669|MTND_BACSU -            178     1e-53  181.4   2.8   1   1   5.5e-57   1.2e-53  181.3   2.8     1   157     3   169     3   169 0.99 ARD/ARD' family
Cupin_2              PF07883.6     71 sp|O31669|MTND_BACSU -            178     3e-10   39.4   0.5   1   1   2.7e-13   5.7e-10   38.5   0.5    13    68    99   158    94   162 0.88 Cupin domain
Cupin_1              PF00190.17   144 sp|O31669|MTND_BACSU -            178     4e-06   26.3   0.2   1   1   3.5e-09   7.4e-06   25.4   0.2    50   121   100   164    96   167 0.90 Cupin
AraC_binding         PF02311.14   136 sp|O31669|MTND_BACSU -            178   0.00044   19.9   0.2   1   1   4.2e-07   0.00089   18.9   0.2    16    64    96   150    91   160 0.90 AraC-like ligand binding domain
SH3BGR               PF04908.10    99 sp|O31669|MTND_BACSU -            178      0.04   13.8   0.1   1   1   4.5e-05     0.096   12.6   0.1    18    44    15    41     6    60 0.76 SH3-binding, glutamic acid-rich protein
SATase_N             PF06426.9    105 sp|O31669|MTND_BACSU -            178     0.081   13.1   0.1   1   1   5.2e-05      0.11   12.7   0.1     4    93     5    95     4    98 0.88 Serine acetyltransferase, N-terminal
Rabaptin             PF03528.10   106 sp|O31669|MTND_BACSU -            178      0.11   12.3   2.1   1   1   9.1e-05      0.19   11.6   2.1    21    94    15    95     6   112 0.63 Rabaptin
Aminotran_1_2        PF00155.16   363 sp|O31665|MTNE_BACSU -            398   2.3e-67  227.5   0.0   1   1   5.2e-71   2.6e-67  227.3   0.0     2   363    33   383    32   383 0.96 Aminotransferase class I and II
Aminotran_5          PF00266.14   371 sp|O31665|MTNE_BACSU -            398    0.0038   16.0   0.0   1   1   1.3e-06    0.0066   15.2   0.0    61   179    94   210    45   215 0.78 Aminotransferase class-V
APH                  PF01636.18   239 sp|O31663|MTNK_BACSU -            397   2.3e-11   43.8   0.0   1   1     1e-14     3e-11   43.4   0.0     2   210    35   269    34   305 0.77 Phosphotransferase enzyme family
APH_6_hur            PF04655.9    253 sp|O31663|MTNK_BACSU -            397   0.00035   19.8   0.0   1   1   1.8e-07   0.00053   19.2   0.0   142   207   211   278   167   304 0.71 Aminoglycoside/hydroxyurea antibiotic resistance kinase
EcKinase             PF02958.15   294 sp|O31663|MTNK_BACSU -            397    0.0072   15.5   0.0   1   1   5.1e-06     0.015   14.4   0.0    66   262    87   268    83   282 0.69 Ecdysteroid kinase
Choline_kinase       PF01633.15   211 sp|O31663|MTNK_BACSU -            397     0.016   14.8   0.0   1   1   8.4e-06     0.025   14.1   0.0   121   189   207   271   155   282 0.82 Choline/ethanolamine kinase
DUF2252              PF10009.4    385 sp|O31663|MTNK_BACSU -            397      0.16   10.8   0.0   1   1   8.1e-05      0.24   10.2   0.0    30   141   216   325   210   373 0.85 Uncharacterized protein conserved in bacteria (DUF2252)
PNP_UDP_1            PF01048.15   234 sp|O32028|MTNN_BACSU -            231   2.8e-53  180.2   1.3   1   1   2.1e-57   3.1e-53  180.1   1.3     1   234     2   228     2   228 0.91 Phosphorylase superfamily
CN_hydrolase         PF00795.17   186 sp|O31664|MTNU_BACSU -            259   7.2e-24   84.1   0.0   1   1     6e-28   8.9e-24   83.8   0.0    18   185    19   169     4   170 0.84 Carbon-nitrogen hydrolase
RuBisCO_large        PF00016.15   309 sp|O31666|MTNW_BACSU -            405   2.7e-20   72.4   0.0   1   2   1.4e-11     1e-07   31.1   0.0     2   171   121   289   120   293 0.91 Ribulose bisphosphate carboxylase large chain, catalytic domain
RuBisCO_large        PF00016.15   309 sp|O31666|MTNW_BACSU -            405   2.7e-20   72.4   0.0   2   2   4.9e-14   3.6e-10   39.1   0.1   218   297   320   398   316   404 0.87 Ribulose bisphosphate carboxylase large chain, catalytic domain
RuBisCO_large_N      PF02788.11   126 sp|O31666|MTNW_BACSU -            405     0.027   14.1   0.0   1   1   5.8e-06     0.043   13.5   0.0    15   105     3    94     1   112 0.79 Ribulose bisphosphate carboxylase large chain, N-terminal domain
HAD                  PF12710.2    192 sp|O31667|MTNX_BACSU -            235   4.5e-17   62.8   0.1   1   1   3.1e-20   9.3e-17   61.8   0.0     1   192     8   179     8   179 0.73 haloacid dehalogenase-like hydrolase
UMPH-1               PF05822.7    246 sp|O31667|MTNX_BACSU -            235   5.4e-06   25.9   0.0   1   1   2.6e-09   7.8e-06   25.3   0.0    77   196    64   179    55   221 0.82 Pyrimidine 5'-nucleotidase (UMPH-1)
Hydrolase            PF00702.21   215 sp|O31667|MTNX_BACSU -            235   0.00047   20.6   0.0   2   2   2.6e-05     0.077   13.3   0.0   187   212   154   179    64   182 0.86 haloacid dehalogenase-like hydrolase
Hydrolase_like       PF13242.1     75 sp|O31667|MTNX_BACSU -            235    0.0054   16.4   0.0   1   1   3.2e-06    0.0096   15.6   0.0    15    39   156   179   146   182 0.85 HAD-hyrolase-like
HAD_2                PF13419.1    176 sp|O31667|MTNX_BACSU -            235    0.0074   16.5   0.1   1   1   0.00016      0.48   10.6   0.1    62   167    62   179     8   183 0.57 Haloacid dehalogenase-like hydrolase
TrpBP                PF02081.10    75 sp|P19466|MTRB_BACSU -             75   4.1e-45  151.0   2.3   1   1     3e-49   4.5e-45  150.9   2.3     1    75     1    75     1    75 0.98 Tryptophan RNA-binding attenuator protein
EPSP_synthase        PF00275.15   419 sp|P70965|MURA1_BACSU -            436  9.2e-124  413.0   2.9   1   1  1.5e-127  1.1e-123  412.8   2.9     1   419     6   407     6   407 0.97 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase)
DUF4369              PF14289.1    106 sp|P70965|MURA1_BACSU -            436     0.068   13.1   0.0   1   1   3.1e-05      0.23   11.4   0.0    15    67   145   201   137   227 0.80 Domain of unknown function (DUF4369)
EPSP_synthase        PF00275.15   419 sp|P19670|MURA2_BACSU -            429  6.5e-102  341.0   2.7   1   1    5e-106  7.5e-102  340.8   2.7     2   419     7   406     6   406 0.95 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase)
MurB_C               PF02873.11   105 sp|P18579|MURB_BACSU -            303   4.4e-41  138.8   0.1   1   1   2.2e-44     8e-41  138.0   0.1     2   105   199   300   198   300 0.98 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain
FAD_binding_4        PF01565.18   139 sp|P18579|MURB_BACSU -            303   2.7e-24   85.2   1.1   1   2   7.2e-28   2.7e-24   85.2   1.1     1   138    34   164    34   165 0.95 FAD binding domain
DUF356               PF04009.7    107 sp|P18579|MURB_BACSU -            303     0.092   12.8   0.3   1   2   8.5e-05      0.32   11.1   0.1    53   104     6    57     1    59 0.84 Protein of unknown function (DUF356)
YqzH                 PF14164.1     64 sp|P18579|MURB_BACSU -            303      0.13   12.1   2.5   2   2   0.00011      0.42   10.5   0.1    27    55   269   297   264   299 0.91 YqzH-like protein
Mur_ligase_M         PF08245.7    188 sp|P40778|MURC_BACSU -            432   3.8e-30  105.3   0.0   1   1   1.4e-33   6.8e-30  104.5   0.0     1   188   106   275   106   275 0.91 Mur ligase middle domain
Mur_ligase_C         PF02875.16    91 sp|P40778|MURC_BACSU -            432   8.7e-20   70.5   0.0   2   2   7.2e-23   3.6e-19   68.6   0.0     1    87   295   377   295   381 0.92 Mur ligase family, glutamate ligase domain
Mur_ligase           PF01225.20    83 sp|P40778|MURC_BACSU -            432   7.8e-19   67.5   0.0   1   1   3.6e-22   1.8e-18   66.3   0.0     2    82     4   101     3   102 0.96 Mur ligase family, catalytic domain
Mur_ligase_M         PF08245.7    188 sp|Q03522|MURD_BACSU -            451   4.3e-45  154.0   2.0   1   1   1.9e-48   7.2e-45  153.3   1.4     1   188   118   292   118   292 0.92 Mur ligase middle domain
Mur_ligase_C         PF02875.16    91 sp|Q03522|MURD_BACSU -            451   1.4e-10   41.0   0.1   2   2   3.1e-13   1.2e-09   38.1   0.0     1    76   312   378   312   390 0.87 Mur ligase family, glutamate ligase domain
SUD-M                PF11633.3    142 sp|Q03522|MURD_BACSU -            451    0.0013   18.0   0.1   1   1   6.9e-07    0.0026   17.0   0.1    46   100   300   356   289   379 0.82 Single-stranded poly(A) binding domain
Cytochrom_C552       PF02335.10   435 sp|Q03522|MURD_BACSU -            451    0.0076   14.9   0.0   1   1   3.8e-06     0.014   14.0   0.0   310   370   284   344   272   376 0.88 Cytochrome c552
Mur_ligase_M         PF08245.7    188 sp|Q03523|MURE_BACSU -            494   1.6e-52  178.3   6.8   1   1   3.2e-56   1.6e-52  178.3   6.8     1   188   107   313   107   313 0.95 Mur ligase middle domain
Mur_ligase_C         PF02875.16    91 sp|Q03523|MURE_BACSU -            494   3.8e-28   97.3   0.0   1   2   5.8e-29   2.9e-25   88.1   0.0     1    90   333   418   333   419 0.97 Mur ligase family, glutamate ligase domain
Mur_ligase           PF01225.20    83 sp|Q03523|MURE_BACSU -            494   3.8e-20   71.7   0.1   1   1   2.2e-23   1.1e-19   70.2   0.1     1    83    23    95    23    95 0.97 Mur ligase family, catalytic domain
Mur_ligase_M         PF08245.7    188 sp|P96613|MURF_BACSU -            457   9.8e-48  162.6   1.3   1   1   4.6e-51   1.7e-47  161.9   1.3     1   187   111   291   111   292 0.94 Mur ligase middle domain
Mur_ligase_C         PF02875.16    91 sp|P96613|MURF_BACSU -            457   2.5e-18   65.9   0.0   3   4   5.8e-20   2.2e-16   59.6   0.0     3    79   314   392   312   398 0.94 Mur ligase family, glutamate ligase domain
Mur_ligase           PF01225.20    83 sp|P96613|MURF_BACSU -            457   3.4e-18   65.4   0.0   1   2   1.6e-20     6e-17   61.5   0.0     2    82    27   100    26   101 0.93 Mur ligase family, catalytic domain
Glyco_hydro_30       PF02055.11   496 sp|P96613|MURF_BACSU -            457      0.12   10.5   0.0   1   1   5.5e-05       0.2    9.7   0.0   108   161   216   270   205   278 0.89 O-Glycosyl hydrolase family 30
Glyco_transf_28      PF03033.15   139 sp|P37585|MURG_BACSU -            363   2.2e-41  140.8   0.0   1   2   3.8e-44     8e-41  139.0   0.0     1   138     3   142     3   143 0.99 Glycosyltransferase family 28 N-terminal domain
Glyco_tran_28_C      PF04101.11   167 sp|P37585|MURG_BACSU -            363   1.1e-40  138.9   0.1   1   1     9e-44   1.9e-40  138.2   0.1     1   166   188   353   188   356 0.97 Glycosyltransferase family 28 C-terminal domain
Glyco_trans_1_3      PF13528.1    318 sp|P37585|MURG_BACSU -            363   3.4e-16   59.3   0.0   1   1   3.8e-19   8.1e-16   58.0   0.0     1   317     1   328     1   329 0.81 Glycosyl transferase family 1
Epimerase_2          PF02350.14   346 sp|P37585|MURG_BACSU -            363   0.00012   20.9   0.2   3   3   3.7e-05     0.078   11.7   0.1   142   345   152   358   145   359 0.74 UDP-N-acetylglucosamine 2-epimerase
Alg14                PF08660.6    170 sp|P37585|MURG_BACSU -            363   0.00015   21.7   0.0   1   2   5.9e-07    0.0013   18.8   0.0     6   114     9   114     6   162 0.83 Oligosaccharide biosynthesis protein Alg14 like
Glycos_transf_1      PF00534.15   172 sp|P37585|MURG_BACSU -            363   0.00021   20.7   1.6   3   3   1.5e-06    0.0033   16.8   0.2    12   170   183   343   175   345 0.78 Glycosyl transferases group 1
UDPGT                PF00201.13   500 sp|P37585|MURG_BACSU -            363   0.00042   18.9   0.0   1   1   3.1e-07   0.00067   18.3   0.0   345   414   263   337   258   345 0.85 UDP-glucoronosyl and UDP-glucosyl transferase
Asp_Glu_race         PF01177.17   216 sp|P94556|MURI1_BACSU -            272   1.2e-38  133.2   0.1   1   1   9.5e-43   1.4e-38  132.9   0.1     1   215     6   216     6   217 0.90 Asp/Glu/Hydantoin racemase
Asp_Glu_race         PF01177.17   216 sp|O05412|MURI2_BACSU -            265     1e-34  120.3   0.0   1   1   1.7e-38   1.2e-34  120.0   0.0     1   215     3   213     3   214 0.87 Asp/Glu/Hydantoin racemase
Peripla_BP_1         PF00532.16   279 sp|O05412|MURI2_BACSU -            265     0.048   12.8   0.0   1   1   8.8e-06     0.066   12.4   0.0    46   117    51   131    35   144 0.77 Periplasmic binding proteins and sugar binding domain of LacI family
SIS                  PF01380.17   131 sp|Q45582|MURQ_BACSU -            304   3.9e-12   45.9   0.3   2   3   1.1e-15   3.9e-12   45.9   0.3    51   121   133   203   115   215 0.88 SIS domain
SIS_2                PF13580.1    138 sp|Q45582|MURQ_BACSU -            304   1.2e-09   38.0   0.1   1   1   9.3e-13   3.4e-09   36.5   0.1    17   137    48   169    35   170 0.80 SIS domain
UBA_4                PF14555.1     43 sp|Q45582|MURQ_BACSU -            304   2.2e-05   23.9   0.1   2   3   5.4e-05       0.2   11.2   0.0     8    33   247   272   241   274 0.93 UBA-like domain
SecD-TM1             PF13721.1    101 sp|Q45582|MURQ_BACSU -            304      0.31   11.3   4.0   1   1   4.6e-05      0.17   12.1   1.5    11    92   207   291   203   294 0.74 SecD export protein N-terminal TM region
MutL_C               PF08676.6    144 sp|P49850|MUTL_BACSU -            627   5.3e-46  155.7   0.1   1   1   2.7e-49   9.9e-46  154.9   0.1     5   144   441   583   437   583 0.97 MutL C terminal dimerisation domain
DNA_mis_repair       PF01119.14   119 sp|P49850|MUTL_BACSU -            627   4.7e-36  122.8   0.0   1   1   2.3e-39   8.7e-36  121.9   0.0     1   118   208   325   208   326 0.98 DNA mismatch repair protein, C-terminal domain
HATPase_c_3          PF13589.1    137 sp|P49850|MUTL_BACSU -            627   1.8e-13   50.3   0.2   1   1   9.4e-17   3.5e-13   49.3   0.2     4    96    25   117    22   148 0.75 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
HATPase_c            PF02518.21   111 sp|P49850|MUTL_BACSU -            627   7.3e-11   41.7   0.1   1   1   4.7e-14   1.8e-10   40.5   0.1     3    97    21   114    19   128 0.78 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
MutS_V               PF00488.16   235 sp|P94545|MUTS2_BACSU -            785   2.5e-43  148.1   0.0   1   1   3.7e-46   4.5e-43  147.3   0.0     2   230   292   513   291   518 0.94 MutS domain V
Smr                  PF01713.16    83 sp|P94545|MUTS2_BACSU -            785   2.9e-15   56.2   1.6   1   1   5.2e-18   6.4e-15   55.1   0.2     1    83   710   785   710   785 0.98 Smr domain
MutS_III             PF05192.13   204 sp|P94545|MUTS2_BACSU -            785   2.4e-13   50.3   2.0   1   2   1.9e-16   2.4e-13   50.3   2.0    25   204    18   284     6   284 0.91 MutS domain III
AAA_21               PF13304.1    303 sp|P94545|MUTS2_BACSU -            785   2.9e-06   27.4   0.4   2   3   2.9e-06    0.0036   17.2   0.0   248   301   400   453   395   454 0.85 AAA domain
OmpH                 PF03938.9    158 sp|P94545|MUTS2_BACSU -            785    0.0016   18.3   3.2   2   2   1.3e-06    0.0016   18.3   3.2    30    99   515   587   383   620 0.75 Outer membrane protein (OmpH-like)
DUF3090              PF11290.3    171 sp|P94545|MUTS2_BACSU -            785      0.14   11.6   4.3   1   2   0.00019      0.23   10.8   0.1    40   137   159   258   153   281 0.80 Protein of unknown function (DUF3090)
Spc7                 PF08317.6    326 sp|P94545|MUTS2_BACSU -            785      0.25    9.9  25.0   3   3   9.8e-06     0.012   14.2  16.9   175   285   505   616   498   620 0.87 Spc7 kinetochore protein
DivIVA               PF05103.8    131 sp|P94545|MUTS2_BACSU -            785       6.9    6.7  24.6   1   1    0.0002      0.25   11.4  16.5    34   120   523   605   516   628 0.85 DivIVA protein
MutS_V               PF00488.16   235 sp|P49849|MUTS_BACSU -            858  1.7e-101  338.5   0.2   1   1  2.4e-104  2.9e-101  337.7   0.2     1   234   555   786   555   787 0.99 MutS domain V
MutS_III             PF05192.13   204 sp|P49849|MUTS_BACSU -            858   9.9e-53  178.9   3.7   1   1   1.2e-55   1.4e-52  178.4   2.4     4   203   257   547   255   548 0.97 MutS domain III
MutS_I               PF01624.15   113 sp|P49849|MUTS_BACSU -            858     1e-47  160.8   0.0   1   1   1.6e-50     2e-47  159.8   0.0     1   112     5   116     5   117 0.98 MutS domain I
MutS_IV              PF05190.13    92 sp|P49849|MUTS_BACSU -            858   2.5e-29  101.2   2.1   1   1     2e-32   2.5e-29  101.2   2.1     1    91   415   506   415   507 0.98 MutS family domain IV
MutS_II              PF05188.12   137 sp|P49849|MUTS_BACSU -            858   1.2e-14   54.5   2.0   1   1   1.4e-17   1.7e-14   54.0   0.2     1   137   125   239   125   239 0.95 MutS domain II
AAA_14               PF13173.1    128 sp|P49849|MUTS_BACSU -            858   0.00015   21.6   0.4   2   2   1.3e-05     0.016   15.0   0.0     1    71   594   684   594   702 0.63 AAA domain
AAA_29               PF13555.1     62 sp|P49849|MUTS_BACSU -            858    0.0098   15.3   0.0   1   1   1.9e-05     0.023   14.2   0.0    22    40   594   612   582   624 0.80 P-loop containing region of AAA domain
KH_3                 PF13014.1     43 sp|P49849|MUTS_BACSU -            858     0.012   15.2   0.1   1   1   2.6e-05     0.032   13.8   0.1    12    42   182   208   180   208 0.94 KH domain
AAA_22               PF13401.1    131 sp|P49849|MUTS_BACSU -            858     0.038   14.1   0.1   1   1   0.00016       0.2   11.7   0.0     3    98   594   685   591   722 0.80 AAA domain
KH_1                 PF00013.24    60 sp|P49849|MUTS_BACSU -            858      0.11   12.1   0.3   1   1   0.00022      0.27   10.9   0.3    21    47   182   208   180   218 0.82 KH domain
NUDIX                PF00293.23   135 sp|P96590|MUTT_BACSU -            149   4.4e-25   87.8   0.0   1   1   7.3e-29   5.4e-25   87.5   0.0     3   126     4   115     2   122 0.90 NUDIX domain
NUDIX_4              PF14815.1    114 sp|P96590|MUTT_BACSU -            149   0.00029   20.2   0.0   1   1     6e-08   0.00045   19.6   0.0     2   107     8   112     6   118 0.81 NUDIX domain
NadA                 PF02445.11   296 sp|Q9KWZ1|NADA_BACSU -            368  2.5e-107  358.0   0.3   1   1    4e-111    3e-107  357.8   0.3     2   296    28   367    27   367 0.95 Quinolinate synthetase A protein
FBA                  PF04300.8    184 sp|Q9KWZ1|NADA_BACSU -            368       0.1   12.5   0.0   1   1   2.8e-05       0.2   11.5   0.0   124   178   111   163    87   167 0.84 F-box associated region
FAD_binding_2        PF00890.19   417 sp|P38032|NADB_BACSU -            531   3.1e-86  289.8   2.0   1   1     1e-89   3.8e-86  289.5   2.0     2   417     6   370     5   370 0.94 FAD binding domain
Succ_DH_flav_C       PF02910.15   129 sp|P38032|NADB_BACSU -            531   1.1e-15   57.5   0.1   1   1     6e-19   2.2e-15   56.6   0.1     3   106   413   506   411   522 0.89 Fumarate reductase flavoprotein C-term
Pyr_redox_2          PF07992.9    201 sp|P38032|NADB_BACSU -            531   8.9e-08   32.2   0.1   1   1   3.9e-10   1.4e-06   28.3   0.1     2   197     6   355     5   358 0.77 Pyridine nucleotide-disulphide oxidoreductase
DAO                  PF01266.19   358 sp|P38032|NADB_BACSU -            531   8.5e-07   28.1   2.6   1   2   1.4e-08     5e-05   22.3   1.6     2   253     6   244     5   382 0.65 FAD dependent oxidoreductase
QRPTase_C            PF01729.14   169 sp|P39666|NADC_BACSU -            289   2.4e-65  219.1   0.0   1   1   4.1e-69     3e-65  218.8   0.0     1   169   108   273   108   273 0.98 Quinolinate phosphoribosyl transferase, C-terminal domain
QRPTase_N            PF02749.11    88 sp|P39666|NADC_BACSU -            289   1.2e-25   89.0   0.1   1   1   3.5e-29   2.6e-25   88.0   0.1     1    88    18   106    18   106 0.95 Quinolinate phosphoribosyl transferase, N-terminal domain
CTP_transf_2         PF01467.21   157 sp|P54455|NADD_BACSU -            189   9.2e-41  139.5   0.0   1   1   7.2e-45   1.1e-40  139.2   0.0     1   157     6   162     6   162 0.99 Cytidylyltransferase
NAD_synthase         PF02540.12   242 sp|P08164|NADE_BACSU -            272   3.5e-82  274.9   0.0   1   1   8.3e-86   4.1e-82  274.7   0.0     2   242    23   263    22   263 0.98 NAD synthase
ATP_bind_3           PF01171.15   182 sp|P08164|NADE_BACSU -            272     0.011   15.2   0.0   1   1   3.4e-06     0.017   14.6   0.0     2    93    42   147    41   193 0.66 PP-loop family
TrbI_Ftype           PF09677.5    111 sp|P08164|NADE_BACSU -            272      0.13   12.0   0.1   1   1   5.6e-05      0.28   11.0   0.1    35    52   105   122    91   146 0.79 Type-F conjugative transfer system protein (TrbI_Ftype)
NAD_kinase           PF01513.16   285 sp|O31612|NADK1_BACSU -            266   9.8e-56  188.6   0.0   1   1   1.6e-59   1.2e-55  188.3   0.0    63   284    20   247     2   248 0.95 ATP-NAD kinase
DAGK_cat             PF00781.19   130 sp|O31612|NADK1_BACSU -            266      0.13   11.6   0.0   1   1   3.7e-05      0.28   10.6   0.0    47    73    29    54     8    70 0.71 Diacylglycerol kinase catalytic domain
NAD_kinase           PF01513.16   285 sp|O34934|NADK2_BACSU -            267   7.2e-52  175.9   0.1   1   1   5.2e-55   1.9e-51  174.5   0.1    49   285    15   253     7   253 0.95 ATP-NAD kinase
LmjF365940-deam      PF14421.1    193 sp|O34934|NADK2_BACSU -            267     0.045   13.1   0.0   1   1   1.3e-05      0.05   12.9   0.0    59   110   131   197    38   257 0.72 A distinct subfamily of CDD/CDA-like deaminases
DAGK_cat             PF00781.19   130 sp|O34934|NADK2_BACSU -            267     0.079   12.3   0.0   1   1   3.9e-05      0.15   11.5   0.0    31    72    20    60     7    79 0.77 Diacylglycerol kinase catalytic domain
Peripla_BP_6         PF13458.1    343 sp|O34934|NADK2_BACSU -            267      0.14   11.5   0.0   1   1   5.7e-05      0.21   10.8   0.0   135   169     5    39     1    46 0.91 Periplasmic binding protein
Amidohydro_1         PF01979.15   333 sp|O34450|NAGA_BACSU -            396   7.6e-43  147.4   1.1   1   1   3.1e-46   9.1e-43  147.1   1.1     1   333    54   372    54   372 0.92 Amidohydrolase family
Amidohydro_4         PF13147.1    304 sp|O34450|NAGA_BACSU -            396     7e-09   36.1   4.8   1   1   3.5e-10     1e-06   28.9   4.8     6   304    54   369    52   369 0.61 Amidohydrolase
Amidohydro_5         PF13594.1     68 sp|O34450|NAGA_BACSU -            396   7.7e-09   35.2   0.0   1   1   8.4e-12   2.5e-08   33.6   0.0     1    67    24    94    24    99 0.71 Amidohydrolase
Amidohydro_3         PF07969.6    404 sp|O34450|NAGA_BACSU -            396   3.3e-07   29.8   0.5   2   2   4.4e-08   0.00013   21.3   0.0   365   404   330   370   312   370 0.81 Amidohydrolase family
DUF4329              PF14220.1    123 sp|O34450|NAGA_BACSU -            396     0.024   14.6   0.0   1   1   2.4e-05      0.07   13.0   0.0    58    99    55    98    11    99 0.71 Domain of unknown function (DUF4329)
Glucosamine_iso      PF01182.15   199 sp|O35000|NAGB_BACSU -            242   4.7e-23   81.9   0.0   1   1   8.5e-27   6.3e-23   81.5   0.0     4   198    11   210     8   211 0.83 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase
Glyco_hydro_3        PF00933.16   299 sp|P40406|NAGZ_BACSU -            642   1.9e-92  309.4   0.1   1   1   5.7e-96   2.8e-92  308.9   0.1     2   298    44   391    43   392 0.98 Glycosyl hydrolase family 3 N terminal domain
Glyco_hydro_3_C      PF01915.17   227 sp|P40406|NAGZ_BACSU -            642   2.9e-20   72.7   0.7   2   2   9.9e-24   4.9e-20   72.0   0.1     2   226   436   637   435   638 0.83 Glycosyl hydrolase family 3 C-terminal domain
AAA_12               PF13087.1    200 sp|P40406|NAGZ_BACSU -            642    0.0079   15.5   3.4   2   2   1.8e-06    0.0087   15.4   2.1    36   162   358   512   348   548 0.63 AAA domain
MFS_1                PF07690.11   352 sp|O34691|NAIP_BACSU -            400   7.8e-49  166.2  55.7   1   2   8.7e-41   3.2e-37  128.0  29.1     6   256    21   266    16   270 0.86 Major Facilitator Superfamily
MFS_1                PF07690.11   352 sp|O34691|NAIP_BACSU -            400   7.8e-49  166.2  55.7   2   2   1.8e-15   6.6e-12   44.8  21.3    40   173   258   390   251   399 0.89 Major Facilitator Superfamily
Sugar_tr             PF00083.19   451 sp|O34691|NAIP_BACSU -            400   5.5e-32  110.9  37.3   1   1   8.8e-33   3.3e-29  101.7  37.3    47   445    47   400    28   400 0.88 Sugar (and other) transporter
MFS_2                PF13347.1    428 sp|O34691|NAIP_BACSU -            400   6.5e-06   24.7   3.3   1   3   1.8e-09   6.5e-06   24.7   3.3   260   343    46   127    19   133 0.90 MFS/sugar transport protein
MFS_2                PF13347.1    428 sp|O34691|NAIP_BACSU -            400   6.5e-06   24.7   3.3   2   3   0.00014       0.5    8.6  15.7   174   338   162   326   129   332 0.77 MFS/sugar transport protein
DUF1228              PF06779.9     85 sp|O34691|NAIP_BACSU -            400     0.015   15.2   0.2   1   4   4.1e-06     0.015   15.2   0.2    14    64    33    83    24   104 0.76 Protein of unknown function (DUF1228)
Oxidored_FMN         PF00724.15   341 sp|P54550|NAMA_BACSU -            338  3.2e-115  384.7   0.1   1   1  4.9e-119  3.7e-115  384.5   0.1     1   340     4   326     4   327 0.96 NADH:flavin oxidoreductase / NADH oxidase family
Dus                  PF01207.12   310 sp|P54550|NAMA_BACSU -            338    0.0074   15.1   0.0   2   2   1.5e-05      0.11   11.3   0.0   177   238   271   333   266   337 0.86 Dihydrouridine synthase (Dus)
Abhydrolase_6        PF12697.2    228 sp|P96688|NAP_BACSU  -            300   6.6e-26   91.5   0.0   1   1   2.2e-29   8.1e-26   91.2   0.0     1   227    58   286    58   287 0.75 Alpha/beta hydrolase family
Abhydrolase_5        PF12695.2    145 sp|P96688|NAP_BACSU  -            300   6.3e-12   45.4   0.0   1   1     1e-14   3.9e-11   42.9   0.0     2   144    58   274    57   275 0.73 Alpha/beta hydrolase family
Abhydrolase_1        PF00561.15   230 sp|P96688|NAP_BACSU  -            300   3.4e-10   39.8   0.0   1   2   2.5e-10   9.3e-07   28.6   0.0    21   107    99   186    82   204 0.68 alpha/beta hydrolase fold
Abhydrolase_1        PF00561.15   230 sp|P96688|NAP_BACSU  -            300   3.4e-10   39.8   0.0   2   2   0.00024      0.89    9.0   0.0   169   228   228   288   223   290 0.90 alpha/beta hydrolase fold
Esterase             PF00756.15   251 sp|P96688|NAP_BACSU  -            300    0.0034   16.8   0.0   1   1   1.3e-06     0.005   16.2   0.0   118   159   125   209   109   268 0.75 Putative esterase
Molybdopterin        PF00384.17   432 sp|P42175|NARG_BACSU -           1228  3.7e-189  628.9   0.0   1   1  1.6e-192  4.8e-189  628.5   0.0     1   432   112   824   112   824 1.00 Molybdopterin oxidoreductase
Molydop_binding      PF01568.16   110 sp|P42175|NARG_BACSU -           1228   6.6e-22   77.4   0.1   1   1   6.1e-25   1.8e-21   76.0   0.1     1   106  1079  1194  1079  1198 0.95 Molydopterin dinucleotide binding domain
Nitr_red_alph_N      PF14710.1     38 sp|P42175|NARG_BACSU -           1228   1.2e-13   51.0   3.2   1   2   3.9e-17   1.2e-13   51.0   3.2     2    38     9    44     8    44 0.98 Respiratory nitrate reductase alpha N-terminal
Molybdop_Fe4S4       PF04879.11    55 sp|P42175|NARG_BACSU -           1228     0.051   13.3   0.0   1   1   3.6e-05      0.11   12.3   0.0     9    54    55   108    47   109 0.81 Molybdopterin oxidoreductase Fe4S4 domain
DUF3945              PF13101.1     59 sp|P42175|NARG_BACSU -           1228     0.089   12.1   0.0   1   1   8.2e-05      0.24   10.7   0.0     7    34   406   433   401   434 0.92 Protein of unknown function (DUF3945)
Nitrate_red_del      PF02613.10   136 sp|P42178|NARJ_BACSU -            184   9.5e-22   77.2   1.6   1   1   7.6e-26   1.1e-21   77.0   1.6     2   126    10   152     9   169 0.87 Nitrate reductase delta subunit
MFS_1                PF07690.11   352 sp|P46907|NARK_BACSU -            395   4.9e-43  147.1  42.6   1   2   1.7e-46   4.9e-43  147.1  42.6     6   350    16   341    13   343 0.85 Major Facilitator Superfamily
MFS_1                PF07690.11   352 sp|P46907|NARK_BACSU -            395   4.9e-43  147.1  42.6   2   2   9.5e-06     0.028   13.1   4.0   113   185   319   391   315   394 0.86 Major Facilitator Superfamily
MFS_1_like           PF12832.2     77 sp|P46907|NARK_BACSU -            395   0.00041   20.0   4.5   4   4   1.4e-07   0.00041   20.0   4.5     2    68   204   271   203   280 0.88 MFS_1 like family
DUF1686              PF07937.6    185 sp|P46907|NARK_BACSU -            395     0.038   13.6   1.5   2   2   3.3e-05     0.098   12.2   0.2    98   162   135   195   127   220 0.78 Protein of unknown function (DUF1686)
2-Hacid_dh_C         PF02826.14   178 sp|P46907|NARK_BACSU -            395     0.039   13.1   0.1   1   1   2.2e-05     0.066   12.3   0.1    30    68   123   161   115   168 0.87 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain
DUF1517              PF07466.6    289 sp|P46907|NARK_BACSU -            395       2.8    6.8   7.0   1   2   3.8e-05      0.11   11.4   0.4     8    91   107   185   100   203 0.70 Protein of unknown function (DUF1517)
MFS_1                PF07690.11   352 sp|P42432|NASA_BACSU -            401   1.2e-44  152.4  46.9   1   2   4.1e-48   1.2e-44  152.4  46.9     3   352    19   350    14   350 0.87 Major Facilitator Superfamily
MFS_2                PF13347.1    428 sp|P42432|NASA_BACSU -            401   4.2e-07   28.7  31.7   1   3   1.1e-06    0.0033   15.8   4.0   231   337    18   125     4   129 0.73 MFS/sugar transport protein
MFS_2                PF13347.1    428 sp|P42432|NASA_BACSU -            401   4.2e-07   28.7  31.7   2   3   1.1e-09   3.1e-06   25.8  10.0   173   341   162   324   133   329 0.81 MFS/sugar transport protein
LacY_symp            PF01306.14   413 sp|P42432|NASA_BACSU -            401   1.6e-05   23.6  20.6   1   2   1.2e-07   0.00035   19.2   3.0    14    91    20    93     9   122 0.72 LacY proton/sugar symporter
LacY_symp            PF01306.14   413 sp|P42432|NASA_BACSU -            401   1.6e-05   23.6  20.6   2   2   7.9e-05      0.23    9.9   9.9     6   117   208   315   203   385 0.78 LacY proton/sugar symporter
MFS_1_like           PF12832.2     77 sp|P42432|NASA_BACSU -            401     0.057   13.2   8.3   1   2   0.00016      0.48   10.2   0.1    24    74    36    87    34    90 0.90 MFS_1 like family
Ni_hydr_CYTB         PF01292.15   182 sp|P42432|NASA_BACSU -            401       1.7    7.9  12.9   1   2   1.3e-05     0.038   13.3   1.8    41    82   147   202    25   214 0.75 Prokaryotic cytochrome b561
Molybdopterin        PF00384.17   432 sp|P42434|NASC_BACSU -            710  7.7e-102  341.2   0.0   1   1  2.2e-105  1.1e-101  340.6   0.0     1   431    78   503    78   504 0.95 Molybdopterin oxidoreductase
Molydop_binding      PF01568.16   110 sp|P42434|NASC_BACSU -            710   9.6e-30  102.6   0.0   1   1   4.2e-33   2.1e-29  101.5   0.0     1   110   597   704   597   704 0.99 Molydopterin dinucleotide binding domain
Molybdop_Fe4S4       PF04879.11    55 sp|P42434|NASC_BACSU -            710   2.9e-12   46.1   0.7   1   1   1.2e-15   6.2e-12   45.1   0.7     1    53    19    73    19    76 0.88 Molybdopterin oxidoreductase Fe4S4 domain
Pyr_redox_2          PF07992.9    201 sp|P42435|NASD_BACSU -            805   1.9e-35  122.6   0.2   1   2   8.9e-37   8.3e-34  117.2   0.2     2   199     6   281     5   283 0.91 Pyridine nucleotide-disulphide oxidoreductase
NIR_SIR              PF01077.17   157 sp|P42435|NASD_BACSU -            805   1.8e-31  108.6   0.0   1   1     4e-34   3.7e-31  107.6   0.0     2   152   626   763   625   768 0.94 Nitrite and sulphite reductase 4Fe-4S domain
Pyr_redox            PF00070.22    80 sp|P42435|NASD_BACSU -            805   7.1e-21   74.4   3.6   2   2     2e-21   1.8e-18   66.6   0.1     2    80   148   227   147   227 0.96 Pyridine nucleotide-disulphide oxidoreductase
Fer2_BFD             PF04324.10    55 sp|P42435|NASD_BACSU -            805   2.6e-20   72.2  14.5   1   2   1.7e-17   1.6e-14   53.6   5.7     2    54   416   467   415   468 0.96 BFD-like [2Fe-2S] binding domain
Fer2_BFD             PF04324.10    55 sp|P42435|NASD_BACSU -            805   2.6e-20   72.2  14.5   2   2     3e-08   2.8e-05   24.0   0.1     3    51   481   530   479   533 0.94 BFD-like [2Fe-2S] binding domain
NIR_SIR_ferr         PF03460.12    69 sp|P42435|NASD_BACSU -            805   2.6e-13   49.3   0.0   1   1   6.2e-16   5.7e-13   48.2   0.0     3    67   556   618   554   619 0.96 Nitrite/Sulfite reductase ferredoxin-like half domain
DAO                  PF01266.19   358 sp|P42435|NASD_BACSU -            805   7.5e-09   34.9   0.5   2   3   0.00069      0.64    8.8   0.4     2    28   148   174   147   180 0.93 FAD dependent oxidoreductase
DAO                  PF01266.19   358 sp|P42435|NASD_BACSU -            805   7.5e-09   34.9   0.5   3   3   1.8e-06    0.0017   17.3   0.0   151   212   191   253   185   395 0.82 FAD dependent oxidoreductase
Pyr_redox_3          PF13738.1    203 sp|P42435|NASD_BACSU -            805   7.8e-09   35.8   0.0   1   2   1.8e-09   1.7e-06   28.2   0.0    96   199    73   177    66   181 0.76 Pyridine nucleotide-disulphide oxidoreductase
HI0933_like          PF03486.9    409 sp|P42435|NASD_BACSU -            805   8.4e-05   21.2   0.9   3   3   0.00018      0.16   10.3   0.0   113   173   191   250   179   257 0.91 HI0933-like protein
GIDA                 PF01134.17   392 sp|P42435|NASD_BACSU -            805    0.0046   15.8   6.3   2   3   0.00071      0.66    8.7   0.5     3    28   149   174   147   191 0.86 Glucose inhibited division protein A
NAD_binding_7        PF13241.1    103 sp|P42435|NASD_BACSU -            805    0.0051   17.0   0.0   2   2   0.00016      0.15   12.3   0.0     6    68   144   239   138   266 0.60 Putative NAD(P)-binding
AlaDh_PNT_C          PF01262.16   168 sp|P42435|NASD_BACSU -            805     0.006   16.1   0.1   2   2   6.1e-05     0.056   12.9   0.0    13    67   138   192   129   215 0.80 Alanine dehydrogenase/PNT, C-terminal domain
Trp_halogenase       PF04820.9    454 sp|P42435|NASD_BACSU -            805     0.023   13.3   0.1   1   1   5.9e-05     0.055   12.0   0.1   157   210   190   242   183   253 0.85 Tryptophan halogenase
3HCDH_N              PF02737.13   180 sp|P42435|NASD_BACSU -            805     0.025   14.2   0.1   1   1   5.4e-05      0.05   13.2   0.1     1    65   147   215   147   240 0.72 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain
CheB_methylest       PF01339.12   182 sp|P42435|NASD_BACSU -            805     0.083   12.3   0.0   1   1   0.00018      0.17   11.2   0.0     1    90     6    95     6   106 0.89 CheB methylesterase
TP_methylase         PF00590.15   210 sp|P42437|NASF_BACSU -            483   2.7e-47  161.2   0.0   1   1   6.6e-51   4.9e-47  160.3   0.0     2   209     8   219     7   220 0.93 Tetrapyrrole (Corrin/Porphyrin) Methylases
HEM4                 PF02602.10   231 sp|P42437|NASF_BACSU -            483   7.5e-08   31.9   0.0   2   3   5.2e-11   3.8e-07   29.5   0.0     2    99   269   360   268   393 0.88 Uroporphyrinogen-III synthase HemD
ABC_tran             PF00005.22   137 sp|P46903|NATA_BACSU -            246   1.7e-33  115.7   0.0   1   1   5.3e-36   2.6e-33  115.2   0.0     2   136    22   165    21   166 0.96 ABC transporter
AAA_21               PF13304.1    303 sp|P46903|NATA_BACSU -            246   8.2e-12   45.6   0.1   1   1   2.3e-12   1.1e-09   38.6   0.1     3   297    35   195    33   198 0.75 AAA domain
AAA_15               PF13175.1    415 sp|P46903|NATA_BACSU -            246   3.2e-08   33.0   0.3   1   2   0.00021       0.1   11.6   0.0    24    57    33   113    11   132 0.71 AAA ATPase domain
AAA_15               PF13175.1    415 sp|P46903|NATA_BACSU -            246   3.2e-08   33.0   0.3   2   2   6.4e-07   0.00032   19.8   0.1   372   411   158   196   137   198 0.89 AAA ATPase domain
AAA_23               PF13476.1    202 sp|P46903|NATA_BACSU -            246   0.00016   22.1   0.3   1   1   5.6e-07   0.00028   21.2   0.3    11    43    22    55    16   231 0.91 AAA domain
NTPase_1             PF03266.10   168 sp|P46903|NATA_BACSU -            246   0.00018   21.2   1.3   1   2   9.3e-06    0.0046   16.6   0.1     2    46    34    81    33    99 0.85 NTPase
NACHT                PF05729.7    166 sp|P46903|NATA_BACSU -            246   0.00049   19.7   0.2   1   2   1.8e-05    0.0089   15.6   0.1     2    25    33    56    32    60 0.88 NACHT domain
UPF0079              PF02367.12   123 sp|P46903|NATA_BACSU -            246   0.00076   19.1   0.1   1   1     3e-06    0.0015   18.1   0.1     8    46    24    63    17    80 0.80 Uncharacterised P-loop hydrolase UPF0079
AAA_29               PF13555.1     62 sp|P46903|NATA_BACSU -            246   0.00084   18.8   0.1   1   1   3.5e-06    0.0017   17.8   0.1    18    51    27    59    20    64 0.85 P-loop containing region of AAA domain
AAA                  PF00004.24   132 sp|P46903|NATA_BACSU -            246    0.0013   18.9   0.3   1   1   2.3e-05     0.012   15.8   0.3     3    95    36   185    34   214 0.80 ATPase family associated with various cellular activities (AAA)
AAA_22               PF13401.1    131 sp|P46903|NATA_BACSU -            246    0.0015   18.6   0.0   1   1    0.0001     0.051   13.7   0.0     7    38    34    57    28   217 0.84 AAA domain
AAA_30               PF13604.1    196 sp|P46903|NATA_BACSU -            246    0.0046   16.5   0.1   1   1   1.5e-05    0.0072   15.9   0.1    14    46    27    59    18    81 0.81 AAA domain
AAA_16               PF13191.1    185 sp|P46903|NATA_BACSU -            246      0.01   15.8   0.0   1   1   7.6e-05     0.037   13.9   0.0    22    55    29    62    10   134 0.83 AAA ATPase domain
ATP-synt_ab          PF00006.20   215 sp|P46903|NATA_BACSU -            246     0.015   14.7   0.0   1   1   3.8e-05     0.019   14.4   0.0     7    49    23    80    18   214 0.66 ATP synthase alpha/beta family, nucleotide-binding domain
AAA_25               PF13481.1    194 sp|P46903|NATA_BACSU -            246     0.022   14.1   0.0   1   1   7.4e-05     0.036   13.4   0.0    29   174    27   185     3   191 0.53 AAA domain
Zeta_toxin           PF06414.7    201 sp|P46903|NATA_BACSU -            246     0.024   13.7   0.1   1   1   9.7e-05     0.048   12.7   0.1    16    50    31    66    14    89 0.83 Zeta toxin
AAA_17               PF13207.1    121 sp|P46903|NATA_BACSU -            246     0.028   15.2   0.4   1   1   0.00045      0.22   12.3   0.1     1    99    33   164    33   191 0.56 AAA domain
PIF1                 PF05970.9    364 sp|P46903|NATA_BACSU -            246     0.035   13.0   0.1   1   2   0.00032      0.16   10.8   0.1     5    54    13    62    11    66 0.82 PIF1-like helicase
KAP_NTPase           PF07693.9    325 sp|P46903|NATA_BACSU -            246     0.035   13.0   0.0   1   1    0.0001     0.052   12.5   0.0     8    47    17    58    14   190 0.80 KAP family P-loop domain
SRP54                PF00448.17   196 sp|P46903|NATA_BACSU -            246      0.04   13.3   0.2   1   1   0.00035      0.17   11.2   0.0     3    42    33    72    31    82 0.85 SRP54-type protein, GTPase domain
AAA_19               PF13245.1     76 sp|P46903|NATA_BACSU -            246     0.042   13.5   0.1   1   1   0.00016     0.078   12.7   0.1    10    37    31    57    21    89 0.79 Part of AAA domain
UPF0259              PF06790.6    248 sp|P46903|NATA_BACSU -            246     0.062   12.7   0.0   1   1   0.00018     0.091   12.1   0.0    55    98   168   211   148   222 0.83 Uncharacterised protein family (UPF0259)
AAA_13               PF13166.1    712 sp|P46903|NATA_BACSU -            246     0.081   11.3   0.1   1   1   0.00058      0.29    9.5   0.0    21    40    36    55    25    83 0.86 AAA domain
MobB                 PF03205.9    140 sp|P46903|NATA_BACSU -            246     0.094   12.4   0.1   1   1   0.00069      0.34   10.6   0.1     2    25    33    56    32    78 0.87 Molybdopterin guanine dinucleotide synthesis protein B
cobW                 PF02492.14   178 sp|P46903|NATA_BACSU -            246      0.11   11.9   0.1   1   1    0.0004       0.2   11.1   0.1     2    22    33    53    32    91 0.77 CobW/HypB/UreG, nucleotide-binding domain
T2SE                 PF00437.15   272 sp|P46903|NATA_BACSU -            246      0.15   10.9   0.8   1   2    0.0014      0.71    8.7   0.1   125   163    28    65     2   103 0.76 Type II/IV secretion system protein
DUF3584              PF12128.3   1201 sp|P46903|NATA_BACSU -            246      0.17    9.2   0.2   1   1   0.00052      0.26    8.5   0.2    20    37    34    51    26    53 0.88 Protein of unknown function (DUF3584)
Oxidored_q1          PF00361.15   270 sp|P39755|NDHF_BACSU -            505   1.9e-57  194.6  20.1   2   3   2.5e-61   1.9e-57  194.6  20.1     1   269   122   390   122   391 0.97 NADH-Ubiquinone/plastoquinone (complex I), various chains
Oxidored_q1_N        PF00662.15    62 sp|P39755|NDHF_BACSU -            505   0.00011   21.6   1.0   1   1   1.6e-08   0.00011   21.6   1.0    21    61    70   110    67   111 0.95 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus
NDK                  PF00334.14   135 sp|P31103|NDK_BACSU  -            149   6.8e-60  200.7   0.0   1   1   5.2e-64   7.7e-60  200.5   0.0     1   134     3   136     3   137 0.99 Nucleoside diphosphate kinase
Endonuclease_5       PF04493.9    206 sp|P96724|NFI_BACSU  -            238   3.6e-76  255.1   0.0   1   1   2.8e-80   4.2e-76  254.8   0.0     2   206    21   226    20   226 0.99 Endonuclease V
Nitroreductase       PF00881.19   165 sp|P94424|NFRA2_BACSU -            249     2e-29  102.5   0.0   1   1   1.8e-33   2.7e-29  102.1   0.0     3   164    10   164     8   165 0.95 Nitroreductase family
Nitroreductase       PF00881.19   165 sp|P39605|NFRA1_BACSU -            249   4.7e-25   88.3   0.0   1   1   4.6e-29   6.9e-25   87.7   0.0     1   165     8   165     8   165 0.92 Nitroreductase family
Na_H_antiporter      PF03553.9    303 sp|O07553|NHAC_BACSU -            453   5.7e-71  239.0  39.7   1   2   1.7e-08   0.00025   20.1  12.9   133   259    40   168     7   168 0.81 Na+/H+ antiporter family
Na_H_antiporter      PF03553.9    303 sp|O07553|NHAC_BACSU -            453   5.7e-71  239.0  39.7   2   2   2.9e-73   4.3e-69  232.8  18.8     1   301   159   451   159   453 0.98 Na+/H+ antiporter family
Na_H_Exchanger       PF00999.16   380 sp|O32212|NHAK_BACSU -            670     1e-62  211.9  49.0   1   1   1.6e-66   1.2e-62  211.6  49.0     2   379     6   414     3   415 0.93 Sodium/hydrogen exchanger family
Usp                  PF00582.21   140 sp|O07552|NHAX_BACSU -            166   2.8e-40  137.7   0.1   1   1   2.3e-44   3.4e-40  137.4   0.1     2   140     4   166     3   166 0.99 Universal stress protein family
Rep_trans            PF02486.14   183 sp|P96635|NICK_BACSU -            352   1.3e-49  168.1   0.5   1   1   1.5e-53   2.2e-49  167.4   0.5     3   182   125   328   123   329 0.95 Replication initiation factor
Carb_kinase          PF01256.12   242 sp|P94368|NNRD_BACSU -            276   1.4e-80  270.1   0.0   1   1   3.2e-84   1.6e-80  269.9   0.0     2   242    31   270    30   270 0.97 Carbohydrate kinase
HK                   PF02110.10   246 sp|P94368|NNRD_BACSU -            276   0.00024   20.3   0.0   1   1   5.9e-07    0.0029   16.8   0.0   126   241   154   269    90   274 0.89 Hydroxyethylthiazole kinase family
Phos_pyr_kin         PF08543.7    246 sp|P94368|NNRD_BACSU -            276    0.0042   16.3   0.0   1   1     2e-06      0.01   15.0   0.0   122   231   145   245   128   257 0.84 Phosphomethylpyrimidine kinase
ParBc                PF02195.13    90 sp|P37524|NOC_BACSU  -            283   2.3e-26   91.7   0.9   1   1   1.7e-29   4.2e-26   90.8   0.1     2    89    32   121    31   122 0.98 ParB-like nuclease domain
KorB                 PF08535.5     93 sp|P37524|NOC_BACSU  -            283   5.5e-05   23.2   0.1   2   2   1.4e-07   0.00035   20.6   0.0     5    43   146   184   143   197 0.88 KorB domain
HTH_3                PF01381.17    55 sp|P37524|NOC_BACSU  -            283   0.00015   21.5   0.2   1   2   5.6e-07    0.0014   18.4   0.1     3    27   138   162   137   163 0.91 Helix-turn-helix
HTH_38               PF13936.1     44 sp|P37524|NOC_BACSU  -            283    0.0038   16.7   0.2   1   1   4.1e-06      0.01   15.3   0.2    14    42   137   166   123   166 0.79 Helix-turn-helix domain
TrmB                 PF01978.14    68 sp|P37524|NOC_BACSU  -            283     0.031   13.9   0.1   1   1   3.9e-05     0.096   12.4   0.1     9    46   131   168   123   176 0.92 Sugar-specific transcriptional regulator TrmB
HTH_31               PF13560.1     64 sp|P37524|NOC_BACSU  -            283     0.075   13.2   0.3   1   1   0.00012      0.28   11.3   0.1     9    32   139   162   117   172 0.89 Helix-turn-helix domain
MatE                 PF01554.13   162 sp|O31855|NORM_BACSU -            452   4.1e-67  224.8  39.1   1   3   2.8e-35   2.1e-31  108.7  11.9     1   162    20   180    20   180 1.00 MatE
MatE                 PF01554.13   162 sp|O31855|NORM_BACSU -            452   4.1e-67  224.8  39.1   2   3   1.1e-40   8.1e-37  126.3  13.8     1   162   247   408   247   408 1.00 MatE
Polysacc_synt_C      PF14667.1    146 sp|O31855|NORM_BACSU -            452   1.9e-12   47.2   8.2   2   3   2.5e-16   1.9e-12   47.2   8.2     2    85   134   223   133   246 0.89 Polysaccharide biosynthesis C-terminal domain
NO_synthase          PF02898.10   372 sp|O34453|NOSO_BACSU -            363  3.4e-125  417.6   0.0   1   1  2.5e-129  3.8e-125  417.4   0.0     4   366     2   362     1   363 0.97 Nitric oxide synthase, oxygenase domain
SIR2                 PF02146.12   178 sp|O07595|NPD_BACSU  -            247     6e-55  185.7   0.0   1   1   1.5e-58   7.3e-55  185.4   0.0     1   178    19   198    19   198 0.97 Sir2 family
TPP_enzyme_M         PF00205.17   137 sp|O07595|NPD_BACSU  -            247     0.001   18.8   0.0   2   2   4.2e-05      0.21   11.3   0.0    61    94   168   199   157   243 0.68 Thiamine pyrophosphate enzyme, central domain
SIR2_2               PF13289.1    143 sp|O07595|NPD_BACSU  -            247      0.11   12.3   0.0   1   1   4.7e-05      0.23   11.3   0.0    16    53    88   122    82   196 0.82 SIR2-like domain
Peptidase_M4_C       PF02868.10   164 sp|P39899|NPRB_BACSU -            538   2.3e-55  186.8   0.9   1   1   1.7e-58   4.2e-55  185.9   0.9     1   164   380   537   380   537 0.99 Thermolysin metallopeptidase, alpha-helical domain
Peptidase_M4         PF01447.13   151 sp|P39899|NPRB_BACSU -            538   6.3e-55  185.4   3.0   2   2   2.6e-58   6.3e-55  185.4   3.0     2   151   223   378   222   378 0.94 Thermolysin metallopeptidase, catalytic domain
PepSY                PF03413.14    64 sp|P39899|NPRB_BACSU -            538   4.2e-14   52.9   0.1   1   1   1.7e-17   4.2e-14   52.9   0.1     2    63   145   217   144   218 0.92 Peptidase propeptide and YPEB domain
FTP                  PF07504.8     51 sp|P39899|NPRB_BACSU -            538   2.2e-09   36.6   0.2   1   1   2.3e-12   5.8e-09   35.2   0.2     2    50    83   132    82   133 0.95 Fungalysin/Thermolysin Propeptide Motif
Peptidase_MA_2       PF13485.1    128 sp|P39899|NPRB_BACSU -            538    0.0094   15.9   0.1   2   2   6.1e-05      0.15   12.0   0.0    27    98   365   439   338   452 0.74 Peptidase MA superfamily
Imm38                PF15599.1    124 sp|P39899|NPRB_BACSU -            538      0.07   12.6   0.0   1   1   7.3e-05      0.18   11.3   0.0    37    81   240   284   214   314 0.83 Immunity protein 38
Peptidase_M4_C       PF02868.10   164 sp|P68736|NPRE_BACSU -            521   2.7e-50  170.3   3.3   2   2   2.6e-52   7.8e-49  165.5   0.3     1   163   375   520   375   521 0.94 Thermolysin metallopeptidase, alpha-helical domain
Peptidase_M4         PF01447.13   151 sp|P68736|NPRE_BACSU -            521   9.3e-49  165.4   9.4   2   2   8.3e-52   2.5e-48  164.0   2.8     3   150   224   372   221   373 0.97 Thermolysin metallopeptidase, catalytic domain
FTP                  PF07504.8     51 sp|P68736|NPRE_BACSU -            521   1.1e-15   56.7   0.5   1   1   1.2e-18   3.6e-15   55.1   0.5     2    50    78   126    77   127 0.97 Fungalysin/Thermolysin Propeptide Motif
PepSY                PF03413.14    64 sp|P68736|NPRE_BACSU -            521   1.4e-12   48.0   1.9   1   1   8.2e-16   2.4e-12   47.2   0.6     1    63   139   215   139   216 0.75 Peptidase propeptide and YPEB domain
Peptidase_MA_2       PF13485.1    128 sp|P68736|NPRE_BACSU -            521     0.031   14.3   0.1   1   1   2.1e-05     0.063   13.3   0.1    27   102   360   434   331   440 0.68 Peptidase MA superfamily
Ribonuc_red_lgC      PF02867.10   538 sp|O31875|NRDEB_BACSU -           1084  3.2e-138  461.6   6.2   1   2   2.7e-71     4e-68  230.3   0.0     1   221   166   389   166   402 0.96 Ribonucleotide reductase, barrel domain
Ribonuc_red_lgC      PF02867.10   538 sp|O31875|NRDEB_BACSU -           1084  3.2e-138  461.6   6.2   2   2   4.2e-69   6.2e-66  223.0   6.3   215   537   766  1068   745  1069 0.92 Ribonucleotide reductase, barrel domain
RNR_N                PF08343.5     82 sp|O31875|NRDEB_BACSU -           1084   1.5e-30  104.8  12.7   1   1     1e-33   1.5e-30  104.8  12.7     1    82     8    88     8    88 0.99 Ribonucleotide reductase N-terminal
LAGLIDADG_3          PF14528.1     77 sp|O31875|NRDEB_BACSU -           1084   1.4e-18   66.8   0.1   2   2     7e-18     1e-14   54.4   0.0     1    74   608   700   608   703 0.86 LAGLIDADG-like domain
Ribonuc_red_lgN      PF00317.16    83 sp|O31875|NRDEB_BACSU -           1084   7.4e-15   54.5   0.7   1   1   1.9e-17   2.8e-14   52.6   0.2     2    82    90   162    89   163 0.94 Ribonucleotide reductase, all-alpha domain
Intein_splicing      PF14890.1    323 sp|O31875|NRDEB_BACSU -           1084   3.5e-11   42.5  13.5   3   3   2.4e-14   3.5e-11   42.5  13.5    51   321   441   762   426   764 0.79 Intein splicing domain
LAGLIDADG_WhiA       PF14527.1     93 sp|O31875|NRDEB_BACSU -           1084    0.0005   19.8   0.0   2   2   2.3e-05     0.034   14.0   0.0     2    56   608   664   607   673 0.88 WhiA LAGLIDADG-like domain
UPF0075              PF03702.9    364 sp|O31875|NRDEB_BACSU -           1084     0.071   12.0   0.0   1   1    0.0001      0.15   10.9   0.0    52   158   338   441   319   446 0.80 Uncharacterised protein family (UPF0075)
Flavodoxin_NdrI      PF07972.6    122 sp|P68524|NRDIB_BACSU -            129   4.1e-35  120.3   0.2   1   1   9.9e-39   4.9e-35  120.0   0.2     2   121     2   112     1   113 0.94 NrdI Flavodoxin like
Flavodoxin_3         PF12641.2    160 sp|P68524|NRDIB_BACSU -            129   0.00027   20.3   0.1   1   1   8.7e-08   0.00043   19.7   0.1     3    68     2    64     1    70 0.93 Flavodoxin domain
Flavodoxin_1         PF00258.20   143 sp|P68524|NRDIB_BACSU -            129    0.0028   17.6   0.0   1   1   7.5e-07    0.0037   17.2   0.0     3   114     3    91     1   122 0.75 Flavodoxin
Flavodoxin_NdrI      PF07972.6    122 sp|P50618|NRDI_BACSU -            130   4.3e-36  123.4   0.1   1   1   7.1e-40   5.3e-36  123.2   0.1     1   121     4   112     4   113 0.95 NrdI Flavodoxin like
Flavodoxin_1         PF00258.20   143 sp|P50618|NRDI_BACSU -            130    0.0075   16.2   0.1   1   1   3.7e-06     0.027   14.4   0.1     1   111     4    85     4    98 0.70 Flavodoxin
ATP-cone             PF03477.11    90 sp|Q45549|NRDR_BACSU -            152   1.3e-17   64.0   0.4   1   1   5.6e-21   1.7e-17   63.6   0.4     2    89    50   136    49   137 0.97 ATP cone domain
Zn_Tnp_IS1595        PF12760.2     46 sp|Q45549|NRDR_BACSU -            152     0.025   14.3   3.0   1   1   1.7e-05     0.049   13.4   3.0    20    45     2    36     1    37 0.84 Transposase zinc-ribbon domain
Ammonium_transp      PF00909.16   399 sp|Q07429|NRGA_BACSU -            404  4.9e-136  453.3  42.1   1   1  7.4e-140  5.5e-136  453.1  42.1     1   399     7   400     7   400 0.96 Ammonium Transporter Family
P-II                 PF00543.17   102 sp|Q07428|NRGB_BACSU -            116   8.1e-31  106.5   0.7   1   1   6.1e-35   9.1e-31  106.3   0.7     1   102     8   109     8   109 0.99 Nitrogen regulatory protein P-II
DHH                  PF01368.15   145 sp|O34600|NRNA_BACSU -            313   4.7e-19   68.4   0.0   1   1   8.7e-23   6.4e-19   68.0   0.0     5   145    12   154     8   154 0.89 DHH family
DHHA1                PF02272.14    68 sp|O34600|NRNA_BACSU -            313   1.7e-09   37.2   0.0   1   1   4.4e-13   3.3e-09   36.3   0.0     2    67   249   306   248   307 0.94 DHHA1 domain
DegT_DnrJ_EryC1      PF01041.12   363 sp|O07566|NTDA_BACSU -            441  1.9e-111  372.5   0.0   1   1  1.1e-114  2.3e-111  372.3   0.0     4   361    81   430    78   432 0.97 DegT/DnrJ/EryC1/StrS aminotransferase family
Aminotran_1_2        PF00155.16   363 sp|O07566|NTDA_BACSU -            441     1e-10   41.1   0.0   1   1   7.5e-14   1.6e-10   40.5   0.0    44   240   101   266    80   277 0.81 Aminotransferase class I and II
Cys_Met_Meta_PP      PF01053.15   386 sp|O07566|NTDA_BACSU -            441   6.3e-06   24.7   0.0   1   1   4.8e-09     1e-05   24.0   0.0    55   216   101   259    98   292 0.75 Cys/Met metabolism PLP-dependent enzyme
Aminotran_5          PF00266.14   371 sp|O07566|NTDA_BACSU -            441   8.6e-06   24.7   0.0   1   1   7.2e-09   1.5e-05   23.9   0.0    45   183   103   230    93   253 0.85 Aminotransferase class-V
Beta_elim_lyase      PF01212.16   290 sp|O07566|NTDA_BACSU -            441   0.00026   20.2   0.0   1   1   5.8e-07    0.0012   18.0   0.0    29   223   101   276    94   287 0.74 Beta-eliminating lyase
HemN_C               PF06969.11    66 sp|O07566|NTDA_BACSU -            441     0.039   14.0   0.1   1   2   0.00029      0.61   10.1   0.1    19    53   308   339   300   348 0.82 HemN C-terminal domain
OKR_DC_1             PF01276.15   417 sp|O07566|NTDA_BACSU -            441     0.041   12.4   0.0   1   1     3e-05     0.064   11.7   0.0    91   139   123   174    99   197 0.76 Orn/Lys/Arg decarboxylase, major domain
S6PP                 PF05116.8    247 sp|O07565|NTDB_BACSU -            282   1.3e-24   86.8   0.0   1   1   3.4e-28   1.7e-24   86.5   0.0     2   221    19   259    18   278 0.85 Sucrose-6F-phosphate phosphohydrolase
Hydrolase_3          PF08282.7    254 sp|O07565|NTDB_BACSU -            282     7e-17   61.8   9.4   1   1   6.2e-19   3.1e-15   56.4   9.0   140   253   167   275    22   276 0.67 haloacid dehalogenase-like hydrolase
HAD                  PF12710.2    192 sp|O07565|NTDB_BACSU -            282      0.04   14.0   1.0   2   2   4.7e-05      0.23   11.5   0.0   125   192   181   241   159   241 0.56 haloacid dehalogenase-like hydrolase
GFO_IDH_MocA         PF01408.17   120 sp|O07564|NTDC_BACSU -            350   1.7e-28   99.5   0.2   1   1   1.6e-31   2.6e-28   98.9   0.2     2   120     3   118     2   118 0.97 Oxidoreductase family, NAD-binding Rossmann fold
GFO_IDH_MocA_C       PF02894.12   115 sp|O07564|NTDC_BACSU -            350   3.1e-21   75.3   0.0   1   1     3e-24   4.9e-21   74.6   0.0     1   115   130   250   130   250 0.98 Oxidoreductase family, C-terminal alpha/beta domain
OCD_Mu_crystall      PF02423.10   314 sp|O07564|NTDC_BACSU -            350   2.2e-05   23.4   0.1   1   1   1.8e-08     3e-05   22.9   0.1   130   179     2    51     1    64 0.88 Ornithine cyclodeaminase/mu-crystallin family
F420_oxidored        PF03807.12    96 sp|O07564|NTDC_BACSU -            350    0.0011   19.3   0.2   1   1   1.3e-06    0.0022   18.3   0.2     1    78     3    77     3    89 0.85 NADP oxidoreductase coenzyme F420-dependent
CoA_binding          PF02629.14    96 sp|O07564|NTDC_BACSU -            350    0.0011   19.4   0.1   1   1   1.3e-06    0.0021   18.5   0.1     4    69     2    66     1    87 0.85 CoA binding domain
2-Hacid_dh_C         PF02826.14   178 sp|O07564|NTDC_BACSU -            350    0.0017   17.5   0.1   1   1   2.1e-06    0.0035   16.5   0.1    37   107     2    76     1    81 0.78 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain
Shikimate_DH         PF01488.15   135 sp|O07564|NTDC_BACSU -            350    0.0086   16.1   0.1   1   1   9.2e-06     0.015   15.3   0.1    13    72     2    57     1   103 0.80 Shikimate / quinate 5-dehydrogenase
Ldh_1_N              PF00056.18   141 sp|O07564|NTDC_BACSU -            350     0.029   14.2   0.1   1   1   3.5e-05     0.057   13.2   0.1     2    40     3    40     2    54 0.92 lactate/malate dehydrogenase, NAD binding domain
NAD_binding_2        PF03446.10   163 sp|O07564|NTDC_BACSU -            350      0.12   12.2   0.1   1   1   0.00013      0.21   11.3   0.1     1    63     1    66     1   115 0.82 NAD binding domain of 6-phosphogluconate dehydrogenase
Ham1p_like           PF01725.11   189 sp|P94558|NTPA_BACSU -            198   2.5e-72  242.2   0.6   1   1   3.8e-76   2.8e-72  242.0   0.6     2   188     8   195     7   196 0.98 Ham1 family
5_nucleotid_C        PF02872.13   156 sp|O34313|NTPES_BACSU -           1462   3.1e-75  251.3   8.9   2   3   1.9e-32   7.1e-29  100.7   0.4     1   154   375   572   375   574 0.80 5'-nucleotidase, C-terminal domain
5_nucleotid_C        PF02872.13   156 sp|O34313|NTPES_BACSU -           1462   3.1e-75  251.3   8.9   3   3   7.6e-49   2.8e-45  154.0   1.0     1   155   977  1139   977  1140 0.93 5'-nucleotidase, C-terminal domain
Metallophos          PF00149.23   200 sp|O34313|NTPES_BACSU -           1462   5.1e-51  172.9   2.1   1   2     3e-27   1.1e-23   83.6   0.1     2   198    46   284    45   286 0.96 Calcineurin-like phosphoesterase
Metallophos          PF00149.23   200 sp|O34313|NTPES_BACSU -           1462   5.1e-51  172.9   2.1   2   2   8.1e-29     3e-25   88.7   0.2     2   199   670   898   669   899 0.97 Calcineurin-like phosphoesterase
PGA_cap              PF09587.5    250 sp|O34313|NTPES_BACSU -           1462   1.8e-10   40.6   3.4   1   2   1.4e-08   5.3e-05   22.6   0.1    67   230   125   288    92   299 0.73 Bacterial capsule synthesis protein PGA_cap
PGA_cap              PF09587.5    250 sp|O34313|NTPES_BACSU -           1462   1.8e-10   40.6   3.4   2   2   5.8e-07    0.0021   17.4   0.1   109   235   799   907   792   914 0.73 Bacterial capsule synthesis protein PGA_cap
Perilipin            PF03036.11   391 sp|O34313|NTPES_BACSU -           1462     0.049   12.4   1.5   2   2   0.00019      0.72    8.6   0.2   108   169   337   401   334   404 0.88 Perilipin family
Nucleos_tra2_C       PF07662.8    210 sp|P39141|NUPC_BACSU -            393   5.4e-69  231.8  13.8   2   2   1.1e-72   5.4e-69  231.8  13.8     1   209   192   392   192   393 0.97 Na+ dependent nucleoside transporter C-terminus
Nucleos_tra2_N       PF01773.15    75 sp|P39141|NUPC_BACSU -            393   1.1e-21   76.8   8.1   1   4   2.3e-25   1.1e-21   76.8   8.1     1    75     8    82     8    82 0.99 Na+ dependent nucleoside transporter N-terminus
Gate                 PF07670.9    109 sp|P39141|NUPC_BACSU -            393     0.012   15.4   4.2   2   3   2.4e-06     0.012   15.4   4.2     3   106    92   188    90   191 0.80 Nucleoside recognition
Gate                 PF07670.9    109 sp|P39141|NUPC_BACSU -            393     0.012   15.4   4.2   3   3   0.00018      0.89    9.4  12.1     6   106   253   356   248   359 0.79 Nucleoside recognition
Nucleos_tra2_C       PF07662.8    210 sp|P42312|NUPG_BACSU -            397   4.7e-56  189.5   8.8   2   2   6.3e-60   4.7e-56  189.5   8.8     1   210   192   396   192   396 0.96 Na+ dependent nucleoside transporter C-terminus
Nucleos_tra2_N       PF01773.15    75 sp|P42312|NUPG_BACSU -            397   3.6e-21   75.2   2.9   1   3   4.9e-25   3.6e-21   75.2   2.9     1    74     8    81     8    82 0.98 Na+ dependent nucleoside transporter N-terminus
NusA_N               PF08529.6    122 sp|P32727|NUSA_BACSU -            371   5.2e-47  158.8   6.5   1   1   4.6e-50   9.7e-47  157.9   6.5     1   120     4   123     4   125 0.99 NusA N-terminal domain
KH_5                 PF13184.1     69 sp|P32727|NUSA_BACSU -            371   6.2e-30  102.8   1.0   1   2   9.7e-32   2.1e-28   97.9   0.4     1    68   229   296   229   297 0.98 NusA-like KH domain
S1                   PF00575.18    74 sp|P32727|NUSA_BACSU -            371   1.2e-14   54.1   0.8   1   1   2.9e-17     6e-14   51.8   0.1     3    71   133   194   131   197 0.95 S1 RNA binding domain
KH_1                 PF00013.24    60 sp|P32727|NUSA_BACSU -            371   7.7e-05   22.2   0.1   2   2   6.1e-05      0.13   11.9   0.0     3    38   305   340   303   358 0.84 KH domain
KH_2                 PF07650.12    78 sp|P32727|NUSA_BACSU -            371   0.00012   21.6   1.3   2   2   6.5e-06     0.014   14.9   0.0     5    55   282   332   280   343 0.82 KH domain
tRNA_anti-codon      PF01336.20    75 sp|P32727|NUSA_BACSU -            371    0.0062   16.3   0.3   1   2   3.3e-05     0.071   12.9   0.1    12    60    39   102    26   121 0.86 OB-fold nucleic acid binding domain
SSXRD                PF09514.5     34 sp|P32727|NUSA_BACSU -            371     0.059   12.6   0.1   1   1   2.8e-05     0.059   12.6   0.1     7    32   111   136   107   136 0.91 SSXRD motif
NusB                 PF01029.13   134 sp|P54520|NUSB_BACSU -            131   1.1e-42  145.2   1.2   1   1   1.7e-46   1.2e-42  145.0   1.2     1   133     4   125     4   126 0.89 NusB family
Phage_term_smal      PF05944.7    132 sp|P54520|NUSB_BACSU -            131     0.026   14.2   0.3   1   1   5.5e-06     0.041   13.5   0.3    30    99    39   110    11   124 0.85 Phage small terminase subunit
NusG                 PF02357.14    92 sp|Q06795|NUSG_BACSU -            177   1.4e-27   95.7   0.6   1   1   4.2e-31   2.1e-27   95.1   0.3     1    89     3   101     3   104 0.91 Transcription termination factor nusG
KOW                  PF00467.24    32 sp|Q06795|NUSG_BACSU -            177   4.3e-08   32.5   0.2   1   1   3.3e-11   1.6e-07   30.7   0.2     4    31   129   158   127   159 0.91 KOW motif
SH3_4                PF06347.8     55 sp|Q06795|NUSG_BACSU -            177     0.037   13.5   0.1   1   1   2.2e-05      0.11   12.0   0.1    16    48    54    89    50    92 0.84 Bacterial SH3 domain
Alpha-amylase        PF00128.19   316 sp|O06994|O16G1_BACSU -            561  7.1e-114  380.4  10.4   1   1  2.6e-117  9.6e-114  380.0  10.4     1   316    27   381    27   381 0.98 Alpha amylase, catalytic domain
hDGE_amylase         PF14701.1    423 sp|O06994|O16G1_BACSU -            561   0.00034   19.6   0.1   1   1   1.7e-07   0.00064   18.7   0.1    22   112    30   113    24   122 0.88 glucanotransferase domain of human glycogen debranching enzyme
DUF3459              PF11941.3     89 sp|O06994|O16G1_BACSU -            561    0.0029   17.6   0.0   1   1   1.9e-06     0.007   16.4   0.0     1    87   466   556   466   557 0.83 Domain of unknown function (DUF3459)
Alpha-amylase_C      PF02806.13    96 sp|O06994|O16G1_BACSU -            561     0.022   14.8   0.0   1   1     2e-05     0.076   13.1   0.0     6    56   490   538   485   557 0.76 Alpha amylase, C-terminal all-beta domain
Alpha-amylase        PF00128.19   316 sp|O34364|O16G2_BACSU -            561  4.7e-103  344.8   4.3   1   1  9.6e-107  7.1e-103  344.3   4.3     1   313    28   376    28   382 0.98 Alpha amylase, catalytic domain
DUF3459              PF11941.3     89 sp|O34364|O16G2_BACSU -            561     0.039   14.0   0.0   1   1     1e-05     0.075   13.1   0.0     1    70   464   535   464   555 0.76 Domain of unknown function (DUF3459)
Alpha-amylase        PF00128.19   316 sp|O05242|O16G3_BACSU -            554   3.6e-97  325.5   3.8   1   2  7.4e-101   3.6e-97  325.5   3.8     1   315    28   374    28   375 0.95 Alpha amylase, catalytic domain
hDGE_amylase         PF14701.1    423 sp|O05242|O16G3_BACSU -            554    0.0003   19.8   0.0   1   1     1e-07   0.00051   19.0   0.0    18   112    27   114    24   123 0.89 glucanotransferase domain of human glycogen debranching enzyme
Orthopox_F14         PF06076.7     73 sp|O05242|O16G3_BACSU -            554       6.3    6.9   8.2   1   2   0.00011      0.52   10.3   1.6    36    62    64    90    58   100 0.87 Orthopoxvirus F14 protein
Aminotran_3          PF00202.16   339 sp|P38021|OAT_BACSU  -            401    3e-117  391.2   0.0   1   1  7.4e-121  3.7e-117  390.9   0.0     2   338    29   349    28   350 0.99 Aminotransferase class-III
Aminotran_1_2        PF00155.16   363 sp|P38021|OAT_BACSU  -            401     0.044   12.7   0.0   1   1   1.2e-05     0.061   12.2   0.0    76   303   129   337    56   394 0.74 Aminotransferase class I and II
Aminotran_5          PF00266.14   371 sp|P38021|OAT_BACSU  -            401     0.045   12.4   0.0   1   1   1.4e-05      0.07   11.8   0.0    93   181   139   235    93   250 0.74 Aminotransferase class-V
GTP1_OBG             PF01018.17   156 sp|P20964|OBG_BACSU  -            428   1.7e-72  242.2   7.1   1   1   2.3e-75   2.6e-72  241.6   7.1     1   156     2   157     2   157 0.99 GTP1/OBG
DUF1967              PF09269.6     69 sp|P20964|OBG_BACSU  -            428   1.5e-26   91.8   0.4   1   1   2.9e-29   3.3e-26   90.7   0.4     1    69   358   426   358   426 0.99 Domain of unknown function (DUF1967)
MMR_HSR1             PF01926.18   116 sp|P20964|OBG_BACSU  -            428   1.5e-19   70.0   0.0   1   1   2.3e-22   2.6e-19   69.2   0.0     1   116   160   283   160   283 0.85 50S ribosome-binding GTPase
FeoB_N               PF02421.13   156 sp|P20964|OBG_BACSU  -            428   3.6e-10   39.3   0.0   1   1   6.3e-13   7.2e-10   38.3   0.0     3   153   161   321   159   324 0.81 Ferrous iron transport protein B
Arf                  PF00025.16   175 sp|P20964|OBG_BACSU  -            428   0.00039   19.6   0.0   1   1   7.3e-07   0.00084   18.6   0.0    20   173   164   326   153   328 0.65 ADP-ribosylation factor family
MMR_HSR1_C           PF08438.5    109 sp|P20964|OBG_BACSU  -            428   0.00046   20.3   0.0   1   1   1.3e-06    0.0015   18.7   0.0     1    38   280   318   280   334 0.91 GTPase of unknown function C-terminal
GTP_EFTU             PF00009.22   188 sp|P20964|OBG_BACSU  -            428    0.0027   17.1   0.1   2   2   1.6e-05     0.019   14.4   0.0   123   187   275   329   260   330 0.77 Elongation factor Tu GTP binding domain
ArgK                 PF03308.11   267 sp|P20964|OBG_BACSU  -            428    0.0099   14.6   0.0   1   2   0.00048      0.55    8.9   0.0    31    49   160   178   141   184 0.90 ArgK protein
PduV-EutP            PF10662.4    143 sp|P20964|OBG_BACSU  -            428     0.012   15.1   0.0   1   1   3.4e-05     0.039   13.4   0.0    81   138   266   321   257   326 0.87 Ethanolamine utilisation - propanediol utilisation
Miro                 PF08477.8    119 sp|P20964|OBG_BACSU  -            428     0.024   15.1   0.0   1   1   4.8e-05     0.055   13.9   0.0     2   119   161   285   160   285 0.78 Miro-like protein
Gtr1_RagA            PF04670.7    232 sp|P20964|OBG_BACSU  -            428      0.13   11.3   0.0   1   1   0.00017       0.2   10.7   0.0     4   136   163   299   160   303 0.77 Gtr1/RagA G protein conserved region
2-oxoacid_dh         PF00198.18   231 sp|P37942|ODB2_BACSU -            424   9.2e-85  283.5   0.5   1   1   6.9e-88   1.3e-84  283.1   0.5     3   227   193   418   191   421 0.98 2-oxoacid dehydrogenases acyltransferase (catalytic domain)
Biotin_lipoyl        PF00364.17    74 sp|P37942|ODB2_BACSU -            424   5.7e-24   83.5   1.3   1   1   6.6e-27   1.2e-23   82.4   1.3     2    74     5    77     4    77 0.98 Biotin-requiring enzyme
E3_binding           PF02817.12    39 sp|P37942|ODB2_BACSU -            424   2.9e-17   62.0   0.4   1   1   3.8e-20     7e-17   60.7   0.4     6    38   118   150   114   151 0.94 e3 binding domain
RnfC_N               PF13375.1    101 sp|P37942|ODB2_BACSU -            424   0.00025   20.7   0.1   1   1   3.9e-07   0.00072   19.2   0.1    39    83    18    63     4    82 0.81 RnfC Barrel sandwich hybrid domain
Biotin_lipoyl_2      PF13533.1     50 sp|P37942|ODB2_BACSU -            424    0.0034   17.0   0.0   1   1   2.3e-05     0.043   13.4   0.0    10    34    17    41    13   100 0.93 Biotin-lipoyl like
LamB                 PF02264.10   398 sp|P37942|ODB2_BACSU -            424     0.023   13.7   1.0   1   1   2.1e-05     0.038   13.0   0.5    56   113   226   287   221   293 0.85 LamB porin
E1_dh                PF00676.15   300 sp|P37940|ODBA_BACSU -            330  3.9e-111  370.5   0.0   1   1  8.9e-115  4.4e-111  370.3   0.0     1   299    20   320    20   321 0.98 Dehydrogenase E1 component
TPP_enzyme_C         PF02775.16   153 sp|P37940|ODBA_BACSU -            330   4.8e-05   22.9   0.3   1   1   2.5e-07    0.0012   18.4   0.1    21   152   118   243   105   244 0.78 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain
Transketolase_N      PF00456.16   333 sp|P37940|ODBA_BACSU -            330     5e-05   22.2   0.0   1   1   1.5e-08   7.2e-05   21.7   0.0   140   241   141   244   101   276 0.80 Transketolase, thiamine diphosphate binding domain
E1_dh                PF00676.15   300 sp|P23129|ODO1_BACSU -            944   1.9e-94  315.7   0.0   1   1   3.4e-98   2.5e-94  315.3   0.0     3   299   220   533   218   534 0.99 Dehydrogenase E1 component
Transket_pyr         PF02779.19   178 sp|P23129|ODO1_BACSU -            944   4.1e-58  195.7   0.0   1   1   9.9e-62   7.4e-58  194.9   0.0     2   177   594   791   593   792 0.97 Transketolase, pyrimidine binding domain
2-oxoacid_dh         PF00198.18   231 sp|P16263|ODO2_BACSU -            417   1.3e-79  266.7   0.1   1   1   7.9e-83   1.7e-79  266.3   0.1     3   231   186   415   184   415 0.98 2-oxoacid dehydrogenases acyltransferase (catalytic domain)
Biotin_lipoyl        PF00364.17    74 sp|P16263|ODO2_BACSU -            417   5.8e-24   83.5   0.9   1   1   6.5e-27   1.4e-23   82.3   0.9     2    74     3    75     2    75 0.98 Biotin-requiring enzyme
E3_binding           PF02817.12    39 sp|P16263|ODO2_BACSU -            417   1.1e-15   56.9   2.6   1   2   6.5e-19   1.4e-15   56.6   0.6     1    39   120   158   120   158 0.97 e3 binding domain
Biotin_lipoyl_2      PF13533.1     50 sp|P16263|ODO2_BACSU -            417   1.2e-06   28.1   3.1   1   2   2.3e-07   0.00049   19.7   0.0    10    40    15    45     9    50 0.87 Biotin-lipoyl like
SOBP                 PF15279.1    306 sp|P16263|ODO2_BACSU -            417     0.081   13.2   6.8   1   1   6.5e-05      0.14   12.5   6.8   102   216    81   196    41   260 0.69 Sine oculis-binding protein
2-oxoacid_dh         PF00198.18   231 sp|P21883|ODP2_BACSU -            442   3.4e-88  294.8   0.8   1   1   2.4e-91   4.4e-88  294.4   0.8     3   231   211   440   209   440 0.98 2-oxoacid dehydrogenases acyltransferase (catalytic domain)
Biotin_lipoyl        PF00364.17    74 sp|P21883|ODP2_BACSU -            442   2.6e-22   78.2   1.5   1   1   1.4e-25   2.6e-22   78.2   1.5     2    73     4    75     3    76 0.98 Biotin-requiring enzyme
E3_binding           PF02817.12    39 sp|P21883|ODP2_BACSU -            442   3.6e-16   58.5   0.4   1   1   6.6e-19   1.2e-15   56.8   0.1     2    38   139   175   138   176 0.96 e3 binding domain
Biotin_lipoyl_2      PF13533.1     50 sp|P21883|ODP2_BACSU -            442   3.3e-10   39.4   3.6   1   2   1.3e-06    0.0024   17.4   0.1    11    36    17    42    14    44 0.91 Biotin-lipoyl like
Biotin_lipoyl_2      PF13533.1     50 sp|P21883|ODP2_BACSU -            442   3.3e-10   39.4   3.6   2   2   5.7e-08   0.00011   21.8   0.7     2    40    45    92    41   117 0.83 Biotin-lipoyl like
HlyD_2               PF12700.2    328 sp|P21883|ODP2_BACSU -            442     7e-05   22.1   8.0   2   3   1.3e-05     0.025   13.7   1.6    24    83    48   115    44   138 0.72 HlyD family secretion protein
GCV_H                PF01597.14   122 sp|P21883|ODP2_BACSU -            442   0.00091   18.9   0.4   1   1   1.4e-06    0.0026   17.4   0.4    33    74    19    59    14    78 0.87 Glycine cleavage H-protein
RnfC_N               PF13375.1    101 sp|P21883|ODP2_BACSU -            442     0.017   14.8   0.8   1   1   3.9e-05     0.072   12.8   0.1    37    89    15    68    13    77 0.84 RnfC Barrel sandwich hybrid domain
HlyD_3               PF13437.1    105 sp|P21883|ODP2_BACSU -            442     0.031   14.6   2.1   2   2   0.00045      0.84   10.0   0.4     2    40    48    88    47   140 0.81 HlyD family secretion protein
DNA_binding_1        PF01035.15    85 sp|P11742|OGT_BACSU  -            165   4.4e-29  100.0   0.0   1   1   8.6e-33   6.4e-29   99.5   0.0     1    83    78   161    78   163 0.95 6-O-methylguanine DNA methyltransferase, DNA binding domain
Methyltransf_1N      PF02870.10    77 sp|P11742|OGT_BACSU  -            165     2e-25   89.1   0.5   1   1   4.1e-29     3e-25   88.5   0.5     1    77     1    75     1    75 0.98 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain
OsmC                 PF02566.14   100 sp|O34762|OHRA_BACSU -            141   2.1e-18   66.3   0.1   1   1   3.9e-22   2.9e-18   65.8   0.1     4   100    44   138    35   138 0.90 OsmC-like protein
SpdB                 PF05122.8     53 sp|O34762|OHRA_BACSU -            141      0.15   12.1   0.0   1   1   3.2e-05      0.24   11.4   0.0    31    52    52    75    37    76 0.77 Mobile element transfer protein
OsmC                 PF02566.14   100 sp|P80242|OHRB_BACSU -            136     4e-21   75.0   0.0   1   1   3.7e-25   5.5e-21   74.6   0.0     3   100    39   134    36   134 0.89 OsmC-like protein
MarR_2               PF12802.2     62 sp|O34709|OPCR_BACSU -            185   8.8e-08   31.7   0.0   1   1   1.4e-10   1.8e-07   30.7   0.0     2    54    28    79    27    86 0.93 MarR family
HTH_24               PF13412.1     48 sp|O34709|OPCR_BACSU -            185   9.3e-06   24.9   0.7   1   2   3.9e-08   4.9e-05   22.6   0.0     7    46    35    75    29    77 0.86 Winged helix-turn-helix DNA-binding
HTH_27               PF13463.1     68 sp|O34709|OPCR_BACSU -            185   5.2e-05   23.4   0.0   1   2   2.7e-07   0.00034   20.8   0.0     8    48    36    76    35    85 0.90 Winged helix DNA-binding domain
MarR                 PF01047.17    59 sp|O34709|OPCR_BACSU -            185   0.00031   20.3   0.7   2   2   5.2e-06    0.0065   16.1   0.1     7    45    35    74    29    78 0.85 MarR family
TrmB                 PF01978.14    68 sp|O34709|OPCR_BACSU -            185   0.00032   20.3   1.0   1   2   4.1e-06     0.005   16.5   0.2    19    58    43    82    39    92 0.87 Sugar-specific transcriptional regulator TrmB
HTH_IclR             PF09339.5     52 sp|O34709|OPCR_BACSU -            185   0.00062   19.3   0.0   1   1   1.2e-06    0.0015   18.0   0.0     7    43    35    71    33    79 0.83 IclR helix-turn-helix domain
HTH_5                PF01022.15    47 sp|O34709|OPCR_BACSU -            185    0.0046   16.5   0.1   1   1   1.6e-05      0.02   14.5   0.0    10    46    41    77    34    78 0.84 Bacterial regulatory protein, arsR family
HTH_Crp_2            PF13545.1     76 sp|O34709|OPCR_BACSU -            185     0.015   15.0   0.1   1   1   6.2e-05     0.076   12.8   0.0    27    59    45    77    35    92 0.87 Crp-like helix-turn-helix domain
HTH_20               PF12840.2     61 sp|O34709|OPCR_BACSU -            185     0.016   14.9   0.0   1   1   3.4e-05     0.042   13.6   0.0    16    56    37    78    31    82 0.86 Helix-turn-helix domain
HTH_10               PF04967.7     53 sp|O34709|OPCR_BACSU -            185     0.032   13.8   0.3   2   2   0.00018      0.22   11.1   0.0    24    46    47    69    42    76 0.90 HTH DNA binding domain
DUF387               PF04079.11   159 sp|O34709|OPCR_BACSU -            185     0.039   13.3   0.5   1   3   0.00019      0.23   10.8   0.1    78   147    27    98     9   106 0.62 Putative transcriptional regulators (Ypuh-like)
DUF387               PF04079.11   159 sp|O34709|OPCR_BACSU -            185     0.039   13.3   0.5   2   3   0.00036      0.44    9.9   0.1     5    39    38    73    34   129 0.67 Putative transcriptional regulators (Ypuh-like)
DUF1323              PF07037.6    122 sp|O34709|OPCR_BACSU -            185     0.093   12.9   0.2   1   1   0.00032      0.39   10.8   0.2     1   105    47   146    47   151 0.65 Putative transcription regulator (DUF1323)
SBP_bac_5            PF00496.17   374 sp|P24141|OPPA_BACSU -            545   2.4e-88  296.5  15.4   1   1   2.1e-92   3.1e-88  296.1  15.4     2   373    83   467    82   468 0.92 Bacterial extracellular solute-binding proteins, family 5 Middle
BPD_transp_1         PF00528.17   185 sp|P24138|OPPB_BACSU -            311   2.2e-42  144.6  16.7   2   2   1.5e-46   2.2e-42  144.6  16.7     1   184   112   303   112   304 0.99 Binding-protein-dependent transport system inner membrane component
BPD_transp_1         PF00528.17   185 sp|P24139|OPPC_BACSU -            305   9.1e-32  110.0  17.0   2   2   3.9e-35   1.5e-31  109.3  11.3     1   185   121   305   121   305 0.96 Binding-protein-dependent transport system inner membrane component
OppC_N               PF12911.2     56 sp|P24139|OPPC_BACSU -            305   2.2e-23   81.3   1.5   1   1   5.8e-27   2.2e-23   81.3   1.5     1    56    26    81    26    81 0.96 N-terminal TM domain of oligopeptide transport permease C
ODV-E18              PF10717.4     85 sp|P24139|OPPC_BACSU -            305       3.5    7.1   8.7   1   3   0.00024      0.89    9.0   0.2    24    53    39    69    20    78 0.71 Occlusion-derived virus envelope protein ODV-E18
ABC_tran             PF00005.22   137 sp|P24136|OPPD_BACSU -            358     3e-29  102.0   0.0   1   1   4.7e-32   4.3e-29  101.5   0.0     2   136    28   186    27   187 0.92 ABC transporter
oligo_HPY            PF08352.7     64 sp|P24136|OPPD_BACSU -            358     8e-16   58.1   0.0   1   1   1.5e-18   1.4e-15   57.3   0.0     1    63   238   302   238   303 0.97 Oligopeptide/dipeptide transporter, C-terminal region
AAA_21               PF13304.1    303 sp|P24136|OPPD_BACSU -            358   1.4e-10   41.6   0.1   1   1   1.1e-11     1e-08   35.5   0.1   224   300   146   220    39   223 0.70 AAA domain
SMC_N                PF02463.14   220 sp|P24136|OPPD_BACSU -            358   2.8e-06   26.7   0.1   1   1   5.5e-09   5.1e-06   25.8   0.1    25   213    38   233    10   240 0.75 RecF/RecN/SMC N terminal domain
AAA_29               PF13555.1     62 sp|P24136|OPPD_BACSU -            358   0.00038   19.9   0.0   1   1   8.3e-07   0.00077   18.9   0.0    15    50    30    65    25    70 0.82 P-loop containing region of AAA domain
AAA_15               PF13175.1    415 sp|P24136|OPPD_BACSU -            358    0.0004   19.5   0.7   2   2   1.7e-05     0.016   14.2   0.1   372   411   179   218   171   222 0.90 AAA ATPase domain
AAA_22               PF13401.1    131 sp|P24136|OPPD_BACSU -            358   0.00059   19.9   0.4   1   2   0.00031      0.29   11.2   0.0     6    26    39    59    34    71 0.87 AAA domain
FtsK_SpoIIIE         PF01580.13   205 sp|P24136|OPPD_BACSU -            358    0.0014   18.1   0.1   1   1   3.1e-06    0.0028   17.1   0.1    30    60    29    59    16    63 0.85 FtsK/SpoIIIE family
AAA_10               PF12846.2    304 sp|P24136|OPPD_BACSU -            358    0.0027   17.2   0.3   1   2   0.00023      0.22   10.9   0.1     4    22    40    58    37    67 0.89 AAA-like domain
AAA_16               PF13191.1    185 sp|P24136|OPPD_BACSU -            358     0.009   16.0   0.0   1   1   1.9e-05     0.018   15.0   0.0    22    58    35    71    23    85 0.83 AAA ATPase domain
ATP-synt_ab          PF00006.20   215 sp|P24136|OPPD_BACSU -            358     0.063   12.7   0.4   1   1   0.00016      0.15   11.5   0.1    13    38    35    60    29   140 0.84 ATP synthase alpha/beta family, nucleotide-binding domain
DUF87                PF01935.12   229 sp|P24136|OPPD_BACSU -            358     0.075   12.8   0.0   1   1   0.00015      0.14   11.9   0.0    26    47    40    61    22    74 0.83 Domain of unknown function DUF87
ABC_ATPase           PF09818.4    448 sp|P24136|OPPD_BACSU -            358     0.095   11.2   0.4   1   1   0.00043       0.4    9.2   0.4   321   413   157   234   140   252 0.80 Predicted ATPase of the ABC class
DUF258               PF03193.11   161 sp|P24136|OPPD_BACSU -            358      0.12   11.5   0.0   1   1   0.00025      0.23   10.6   0.0    22    51    23    53     4    95 0.84 Protein of unknown function, DUF258
AAA_18               PF13238.1    129 sp|P24136|OPPD_BACSU -            358      0.13   12.5   0.1   1   1   0.00035      0.33   11.2   0.1     2    31    41    75    40   223 0.87 AAA domain
AAA_23               PF13476.1    202 sp|P24136|OPPD_BACSU -            358      0.15   12.3   0.2   1   1   0.00035      0.33   11.2   0.2    10    40    27    58    16   216 0.72 AAA domain
ABC_tran             PF00005.22   137 sp|P24137|OPPF_BACSU -            305   1.7e-33  115.8   0.0   1   1   2.3e-36   2.6e-33  115.2   0.0     2   136    26   178    25   179 0.96 ABC transporter
oligo_HPY            PF08352.7     64 sp|P24137|OPPF_BACSU -            305   5.9e-09   36.1   0.2   1   1   9.9e-12   1.1e-08   35.2   0.2     1    47   230   277   230   282 0.81 Oligopeptide/dipeptide transporter, C-terminal region
AAA_21               PF13304.1    303 sp|P24137|OPPF_BACSU -            305     1e-07   32.2   0.1   2   2   9.3e-08   0.00011   22.3   0.0   220   301   134   213    97   215 0.80 AAA domain
SMC_N                PF02463.14   220 sp|P24137|OPPF_BACSU -            305   3.1e-05   23.3   0.6   1   1   9.8e-08   0.00011   21.4   0.6    29   212    40   224    26   230 0.76 RecF/RecN/SMC N terminal domain
ATP-synt_ab          PF00006.20   215 sp|P24137|OPPF_BACSU -            305      0.01   15.3   0.0   1   1   1.2e-05     0.014   14.9   0.0     7    43    27    64    21   166 0.77 ATP synthase alpha/beta family, nucleotide-binding domain
DUF258               PF03193.11   161 sp|P24137|OPPF_BACSU -            305     0.013   14.6   0.0   1   1   2.3e-05     0.026   13.7   0.0    17    66    16    66     2    92 0.76 Protein of unknown function, DUF258
AAA_22               PF13401.1    131 sp|P24137|OPPF_BACSU -            305     0.014   15.5   0.5   1   1   3.5e-05      0.04   14.0   0.5     9    95    40   176    34   217 0.56 AAA domain
AIG1                 PF04548.11   212 sp|P24137|OPPF_BACSU -            305     0.016   14.3   0.6   1   1   2.8e-05     0.032   13.3   0.1     3    22    38    57    36    79 0.91 AIG1 family
AAA_16               PF13191.1    185 sp|P24137|OPPF_BACSU -            305     0.017   15.0   0.1   1   1     2e-05     0.023   14.6   0.1    24    63    35    75     7   203 0.80 AAA ATPase domain
AAA_13               PF13166.1    712 sp|P24137|OPPF_BACSU -            305     0.028   12.8   0.1   2   2     7e-05      0.08   11.3   0.0   528   580   169   220   162   280 0.92 AAA domain
AAA_29               PF13555.1     62 sp|P24137|OPPF_BACSU -            305     0.049   13.1   0.1   1   1   7.5e-05     0.086   12.3   0.1    16    39    29    51    20    72 0.75 P-loop containing region of AAA domain
AAA                  PF00004.24   132 sp|P24137|OPPF_BACSU -            305     0.072   13.2   0.3   1   1   0.00021      0.24   11.6   0.3     3    54    40    97    38   217 0.76 ATPase family associated with various cellular activities (AAA)
G-alpha              PF00503.15   389 sp|P24137|OPPF_BACSU -            305      0.14   10.7   0.0   1   1   0.00014      0.16   10.6   0.0    62    88    39    73    32   236 0.71 G-protein alpha subunit
ABC_tran             PF00005.22   137 sp|P46920|OPUAA_BACSU -            418   4.1e-35  121.0   0.0   1   1   1.4e-37   8.9e-35  119.9   0.0     2   136    50   197    49   198 0.93 ABC transporter
CBS                  PF00571.23    57 sp|P46920|OPUAA_BACSU -            418   3.4e-11   42.7   0.1   1   2   2.7e-07   0.00017   21.3   0.0     2    54   282   333   281   335 0.91 CBS domain
CBS                  PF00571.23    57 sp|P46920|OPUAA_BACSU -            418   3.4e-11   42.7   0.1   2   2   1.4e-06   0.00086   19.0   0.1     3    56   342   394   340   395 0.94 CBS domain
AAA_21               PF13304.1    303 sp|P46920|OPUAA_BACSU -            418   3.5e-10   40.3   0.9   1   2   0.00042      0.26   11.2   0.1     2    24    62    84    61   123 0.74 AAA domain
AAA_21               PF13304.1    303 sp|P46920|OPUAA_BACSU -            418   3.5e-10   40.3   0.9   2   2   1.2e-08   7.3e-06   26.1   0.1   191   299   130   230    89   234 0.72 AAA domain
AAA_22               PF13401.1    131 sp|P46920|OPUAA_BACSU -            418     5e-05   23.4   2.6   1   1   9.1e-07   0.00056   20.0   1.2     4   123    59   227    54   258 0.70 AAA domain
AAA_16               PF13191.1    185 sp|P46920|OPUAA_BACSU -            418   0.00016   21.6   0.0   1   1   5.4e-07   0.00033   20.6   0.0    24    67    59   104    53   236 0.59 AAA ATPase domain
AAA_17               PF13207.1    121 sp|P46920|OPUAA_BACSU -            418   0.00024   21.9   0.1   1   1   1.4e-06   0.00084   20.1   0.1     2    46    62   112    61   245 0.74 AAA domain
ABC_ATPase           PF09818.4    448 sp|P46920|OPUAA_BACSU -            418   0.00073   18.2   0.1   2   2   0.00043      0.27    9.7   0.1   322   405   169   237   161   268 0.76 Predicted ATPase of the ABC class
DUF258               PF03193.11   161 sp|P46920|OPUAA_BACSU -            418   0.00082   18.5   0.1   1   1   2.8e-06    0.0017   17.5   0.1    22    59    45    83    23   112 0.77 Protein of unknown function, DUF258
G-alpha              PF00503.15   389 sp|P46920|OPUAA_BACSU -            418     0.001   17.8   0.1   2   2   0.00023      0.14   10.8   0.1    62    88    63   106    60   156 0.72 G-protein alpha subunit
AAA_29               PF13555.1     62 sp|P46920|OPUAA_BACSU -            418    0.0014   18.0   0.0   1   1     5e-06    0.0031   17.0   0.0    16    46    53    82    47    91 0.76 P-loop containing region of AAA domain
Arch_ATPase          PF01637.13   234 sp|P46920|OPUAA_BACSU -            418    0.0028   17.3   5.2   1   2   0.00028      0.17   11.5   0.0    21    68    60   105    54   163 0.65 Archaeal ATPase
AAA_14               PF13173.1    128 sp|P46920|OPUAA_BACSU -            418    0.0037   17.1   0.2   1   1   4.8e-05      0.03   14.2   0.0     2    54    59   108    58   135 0.74 AAA domain
APS_kinase           PF01583.15   157 sp|P46920|OPUAA_BACSU -            418    0.0054   16.4   0.0   1   1   2.6e-05     0.016   14.8   0.0     3    44    60   100    58   123 0.74 Adenylylsulphate kinase
AAA_33               PF13671.1    143 sp|P46920|OPUAA_BACSU -            418    0.0087   15.9   0.0   1   1   2.8e-05     0.017   14.9   0.0     3    20    63    80    61   151 0.79 AAA domain
AAA_18               PF13238.1    129 sp|P46920|OPUAA_BACSU -            418      0.01   16.1   0.1   1   1   0.00012     0.075   13.3   0.0     2    50    63   107    63   146 0.67 AAA domain
AAA_15               PF13175.1    415 sp|P46920|OPUAA_BACSU -            418     0.031   13.3   4.1   2   2   0.00022      0.14   11.2   0.0   371   411   187   229   166   230 0.89 AAA ATPase domain
Zeta_toxin           PF06414.7    201 sp|P46920|OPUAA_BACSU -            418     0.039   13.0   0.0   1   1   0.00011     0.071   12.2   0.0    19    80    62   122    58   132 0.83 Zeta toxin
AAA_23               PF13476.1    202 sp|P46920|OPUAA_BACSU -            418      0.04   14.2   1.0   1   1   0.00012     0.074   13.3   0.0    16    37    53    77    39    83 0.84 AAA domain
MobB                 PF03205.9    140 sp|P46920|OPUAA_BACSU -            418     0.047   13.3   0.0   1   1   0.00032      0.19   11.3   0.0     2    24    61    82    60   137 0.87 Molybdopterin guanine dinucleotide synthesis protein B
AAA_PrkA             PF08298.6    358 sp|P46920|OPUAA_BACSU -            418      0.05   12.2   0.1   1   2   0.00029      0.18   10.4   0.0    89   120    60    93     9   143 0.76 PrkA AAA domain
Adeno_IVa2           PF02456.10   370 sp|P46920|OPUAA_BACSU -            418     0.055   12.1   0.0   1   1   0.00015     0.095   11.3   0.0    64   122    32    91    12   108 0.73 Adenovirus IVa2 protein
SbcCD_C              PF13558.1     90 sp|P46920|OPUAA_BACSU -            418     0.091   12.6   0.1   1   1   0.00036      0.22   11.4   0.1    54    83   178   207   168   214 0.74 Putative exonuclease SbcCD, C subunit
AAA_10               PF12846.2    304 sp|P46920|OPUAA_BACSU -            418      0.11   11.8   3.0   1   1   0.00024      0.15   11.5   0.4     4    22    62    80    59    93 0.86 AAA-like domain
KH_2                 PF07650.12    78 sp|P46920|OPUAA_BACSU -            418      0.34   10.4   4.3   1   1   0.00044      0.27   10.8   0.3     7    68    36    92    33   114 0.91 KH domain
BPD_transp_1         PF00528.17   185 sp|P46921|OPUAB_BACSU -            282     1e-21   77.2  13.6   2   2     7e-26     1e-21   77.2  13.6     1   168   108   265   108   274 0.92 Binding-protein-dependent transport system inner membrane component
ABC_tran             PF00005.22   137 sp|Q45460|OPUBA_BACSU -            381   3.1e-35  121.4   0.0   1   1   2.1e-37   9.3e-35  119.8   0.0     1   136    18   163    18   164 0.97 ABC transporter
CBS                  PF00571.23    57 sp|Q45460|OPUBA_BACSU -            381   9.2e-23   79.7  10.6   1   2   1.5e-13   6.8e-11   41.7   0.3     1    47   252   298   252   305 0.94 CBS domain
CBS                  PF00571.23    57 sp|Q45460|OPUBA_BACSU -            381   9.2e-23   79.7  10.6   2   2   6.6e-14     3e-11   42.9   2.1     1    55   312   366   312   368 0.95 CBS domain
AAA_21               PF13304.1    303 sp|Q45460|OPUBA_BACSU -            381   1.6e-10   41.4   0.0   1   2   6.6e-05      0.03   14.3   0.0     1    24    30    53    30    84 0.75 AAA domain
AAA_21               PF13304.1    303 sp|Q45460|OPUBA_BACSU -            381   1.6e-10   41.4   0.0   2   2   3.7e-08   1.7e-05   24.9   0.0   227   298   126   195    95   201 0.88 AAA domain
AAA_16               PF13191.1    185 sp|Q45460|OPUBA_BACSU -            381   3.1e-05   24.0   0.0   1   1   5.6e-07   0.00025   21.0   0.0    22    81    26    84    16   208 0.49 AAA ATPase domain
AAA                  PF00004.24   132 sp|Q45460|OPUBA_BACSU -            381    0.0014   18.8   0.1   1   1   1.7e-05    0.0076   16.4   0.1     1    37    31    69    31   213 0.70 ATPase family associated with various cellular activities (AAA)
AAA_17               PF13207.1    121 sp|Q45460|OPUBA_BACSU -            381    0.0018   19.0   0.0   1   1   2.9e-05     0.013   16.3   0.0     2    21    31    50    30   129 0.86 AAA domain
AAA_22               PF13401.1    131 sp|Q45460|OPUBA_BACSU -            381    0.0029   17.7   1.8   1   1   8.7e-06    0.0039   17.3   0.1     4    28    28    52    24   225 0.88 AAA domain
SMC_N                PF02463.14   220 sp|Q45460|OPUBA_BACSU -            381    0.0036   16.5   0.2   2   2   0.00084      0.38    9.9   0.0   112   208    60   206    46   214 0.66 RecF/RecN/SMC N terminal domain
ResIII               PF04851.10   184 sp|Q45460|OPUBA_BACSU -            381    0.0068   16.2   0.2   1   1   3.4e-05     0.015   15.1   0.0     9    65    15    69     8   161 0.88 Type III restriction enzyme, res subunit
ATP-synt_ab          PF00006.20   215 sp|Q45460|OPUBA_BACSU -            381     0.007   15.8   0.0   1   1   1.9e-05    0.0085   15.6   0.0    11    49    24   163    14   341 0.61 ATP synthase alpha/beta family, nucleotide-binding domain
MobB                 PF03205.9    140 sp|Q45460|OPUBA_BACSU -            381    0.0072   16.0   0.6   1   2   0.00061      0.28   10.9   0.0     3    24    31    51    29    59 0.83 Molybdopterin guanine dinucleotide synthesis protein B
Rad17                PF03215.10   519 sp|Q45460|OPUBA_BACSU -            381     0.012   14.3   0.0   1   1     4e-05     0.018   13.7   0.0    34    69    17    52     9    72 0.81 Rad17 cell cycle checkpoint protein
RNA_helicase         PF00910.17   107 sp|Q45460|OPUBA_BACSU -            381     0.012   15.7   0.0   1   1   0.00013      0.06   13.5   0.0     1    22    31    52    31    73 0.79 RNA helicase
DUF258               PF03193.11   161 sp|Q45460|OPUBA_BACSU -            381     0.016   14.3   0.1   1   1   7.9e-05     0.035   13.2   0.0    23    58    15    51     3    94 0.80 Protein of unknown function, DUF258
AAA_30               PF13604.1    196 sp|Q45460|OPUBA_BACSU -            381     0.019   14.5   0.0   1   1   9.7e-05     0.044   13.3   0.0    17    49    27    59    15    65 0.82 AAA domain
Arch_ATPase          PF01637.13   234 sp|Q45460|OPUBA_BACSU -            381      0.02   14.6   2.1   1   2   0.00028      0.13   11.9   0.0    14    56    24    63    15   196 0.80 Archaeal ATPase
AAA_18               PF13238.1    129 sp|Q45460|OPUBA_BACSU -            381      0.02   15.1   1.2   1   1   0.00037      0.17   12.2   0.2     1    23    31    63    31   226 0.87 AAA domain
Mg_chelatase         PF01078.16   207 sp|Q45460|OPUBA_BACSU -            381     0.022   13.9   0.0   1   1   9.8e-05     0.044   12.9   0.0     6    54    12    60     8    93 0.86 Magnesium chelatase, subunit ChlI
AAA_10               PF12846.2    304 sp|Q45460|OPUBA_BACSU -            381     0.026   13.9   0.5   1   1   0.00023       0.1   11.9   0.0     4    23    31    50    29    63 0.84 AAA-like domain
G-alpha              PF00503.15   389 sp|Q45460|OPUBA_BACSU -            381     0.028   13.0   0.0   1   1   6.3e-05     0.028   13.0   0.0    61    87    31    57    12   283 0.86 G-protein alpha subunit
AAA_29               PF13555.1     62 sp|Q45460|OPUBA_BACSU -            381      0.04   13.4   0.0   1   1   0.00016     0.072   12.6   0.0    17    50    23    55    16    61 0.79 P-loop containing region of AAA domain
tRNA_lig_kinase      PF08303.6    168 sp|Q45460|OPUBA_BACSU -            381     0.053   13.3   0.4   1   2    0.0013       0.6    9.9   0.0     6    45    35    77    30    94 0.73 tRNA ligase kinase domain
PduV-EutP            PF10662.4    143 sp|Q45460|OPUBA_BACSU -            381     0.059   12.8   0.1   1   1    0.0013      0.58    9.6   0.0     4    22    31    49    29    54 0.89 Ethanolamine utilisation - propanediol utilisation
AAA_28               PF13521.1    163 sp|Q45460|OPUBA_BACSU -            381     0.065   13.2   0.1   1   1   0.00035      0.16   11.9   0.1     2    20    31    49    30    60 0.87 AAA domain
PRK                  PF00485.13   194 sp|Q45460|OPUBA_BACSU -            381     0.081   12.4   0.0   1   1   0.00046      0.21   11.1   0.0     2    24    31    53    30    77 0.82 Phosphoribulokinase / Uridine kinase family
AAA_25               PF13481.1    194 sp|Q45460|OPUBA_BACSU -            381     0.083   12.2   0.0   1   1   0.00058      0.26   10.6   0.0    30    50    25    45    15    65 0.92 AAA domain
AAA_14               PF13173.1    128 sp|Q45460|OPUBA_BACSU -            381     0.094   12.6   0.0   1   1    0.0005      0.22   11.3   0.0     3    43    29    69    27   107 0.74 AAA domain
AAA_33               PF13671.1    143 sp|Q45460|OPUBA_BACSU -            381       0.1   12.4   0.0   1   1   0.00054      0.24   11.2   0.0     2    19    31    48    30   117 0.82 AAA domain
AAA_23               PF13476.1    202 sp|Q45460|OPUBA_BACSU -            381      0.24   11.6   2.9   1   1     0.001      0.45   10.7   2.8    13    40    21    49     2   280 0.92 AAA domain
BPD_transp_1         PF00528.17   185 sp|Q45461|OPUBB_BACSU -            217   3.2e-22   78.9  17.5   1   1   1.1e-25     4e-22   78.6  17.5     1   175    37   201    25   208 0.92 Binding-protein-dependent transport system inner membrane component
Mito_carr            PF00153.22    96 sp|Q45461|OPUBB_BACSU -            217     0.038   13.7   0.2   1   1   2.2e-05     0.081   12.6   0.2     5    53    19    63    16    73 0.86 Mitochondrial carrier protein
DUF2929              PF11151.3     57 sp|Q45461|OPUBB_BACSU -            217       0.4   10.8   0.2   1   2   0.00011       0.4   10.8   0.2    21    47    12    38     3    49 0.87 Protein of unknown function (DUF2929)
OpuAC                PF04069.7    257 sp|Q45462|OPUBC_BACSU -            306   9.6e-58  195.5   1.3   1   1   7.3e-62   1.1e-57  195.3   1.3     2   257    35   300    34   300 0.96 Substrate binding domain of ABC-type glycine betaine transport system
BPD_transp_1         PF00528.17   185 sp|P39775|OPUBD_BACSU -            226   7.4e-24   84.2  21.6   1   1   1.4e-27     1e-23   83.8  21.6     1   183    40   209    40   212 0.94 Binding-protein-dependent transport system inner membrane component
FA_desaturase        PF00487.19   257 sp|P39775|OPUBD_BACSU -            226      0.32   10.3   9.4   1   2   9.6e-06     0.071   12.5   6.0    88   185    20   117     8   147 0.70 Fatty acid desaturase
ABC_tran             PF00005.22   137 sp|O34992|OPUCA_BACSU -            380   1.9e-33  115.6   0.0   1   1   1.1e-35   5.1e-33  114.2   0.0     2   136    19   163    18   164 0.97 ABC transporter
CBS                  PF00571.23    57 sp|O34992|OPUCA_BACSU -            380   8.6e-23   79.8   4.5   1   2   7.8e-13   3.6e-10   39.4   0.4     1    47   251   297   251   301 0.95 CBS domain
CBS                  PF00571.23    57 sp|O34992|OPUCA_BACSU -            380   8.6e-23   79.8   4.5   2   2   1.7e-13     8e-11   41.5   0.4     1    55   311   365   311   367 0.95 CBS domain
AAA_21               PF13304.1    303 sp|O34992|OPUCA_BACSU -            380   4.2e-11   43.3   0.0   1   2   4.2e-05     0.019   14.9   0.0     1    34    30    61    30    78 0.74 AAA domain
AAA_21               PF13304.1    303 sp|O34992|OPUCA_BACSU -            380   4.2e-11   43.3   0.0   2   2   1.5e-08   7.1e-06   26.1   0.0   227   298   126   195    87   201 0.86 AAA domain
AAA_16               PF13191.1    185 sp|O34992|OPUCA_BACSU -            380     6e-05   23.1   0.1   1   1   1.4e-06   0.00065   19.7   0.0    23    63    27    68    17   207 0.49 AAA ATPase domain
AAA_22               PF13401.1    131 sp|O34992|OPUCA_BACSU -            380   0.00037   20.6   1.7   1   2   9.6e-06    0.0044   17.1   0.1     4    27    28    51    24   227 0.87 AAA domain
AAA                  PF00004.24   132 sp|O34992|OPUCA_BACSU -            380     0.001   19.2   0.0   1   1   1.2e-05    0.0057   16.8   0.0     1    37    31    69    31   225 0.68 ATPase family associated with various cellular activities (AAA)
AAA_17               PF13207.1    121 sp|O34992|OPUCA_BACSU -            380    0.0023   18.7   0.4   1   1   2.6e-05     0.012   16.4   0.1     2    21    31    50    30   123 0.83 AAA domain
AAA_10               PF12846.2    304 sp|O34992|OPUCA_BACSU -            380    0.0024   17.3   0.1   1   2   0.00017     0.078   12.4   0.0     4    25    31    52    29    62 0.79 AAA-like domain
SMC_N                PF02463.14   220 sp|O34992|OPUCA_BACSU -            380    0.0028   16.9   0.2   2   3    0.0013       0.6    9.2   0.0   111   208    59   206    45   214 0.67 RecF/RecN/SMC N terminal domain
ATP-synt_ab          PF00006.20   215 sp|O34992|OPUCA_BACSU -            380    0.0095   15.4   0.0   1   1   3.4e-05     0.016   14.7   0.0    12    47    25    61    14   276 0.66 ATP synthase alpha/beta family, nucleotide-binding domain
Rad17                PF03215.10   519 sp|O34992|OPUCA_BACSU -            380      0.01   14.5   0.0   1   1   3.4e-05     0.016   13.9   0.0    34    69    17    52     7    78 0.80 Rad17 cell cycle checkpoint protein
AAA_18               PF13238.1    129 sp|O34992|OPUCA_BACSU -            380     0.011   16.0   0.2   1   2   0.00051      0.23   11.7   0.1     1    23    31    63    31   120 0.75 AAA domain
AAA_30               PF13604.1    196 sp|O34992|OPUCA_BACSU -            380     0.012   15.1   0.0   1   1     8e-05     0.037   13.5   0.0    18    50    28    60    16    65 0.85 AAA domain
MobB                 PF03205.9    140 sp|O34992|OPUCA_BACSU -            380     0.013   15.2   0.5   1   2   0.00054      0.25   11.0   0.0     3    24    31    51    29    60 0.83 Molybdopterin guanine dinucleotide synthesis protein B
RNA_helicase         PF00910.17   107 sp|O34992|OPUCA_BACSU -            380     0.015   15.4   0.0   1   1   0.00012     0.057   13.5   0.0     1    23    31    53    31    75 0.80 RNA helicase
tRNA_lig_kinase      PF08303.6    168 sp|O34992|OPUCA_BACSU -            380     0.015   15.1   0.3   1   2    0.0013      0.61    9.9   0.0     6    45    35    77    30    89 0.72 tRNA ligase kinase domain
ResIII               PF04851.10   184 sp|O34992|OPUCA_BACSU -            380     0.016   15.0   0.0   1   1   0.00012     0.055   13.2   0.0     9    65    15    69     8   162 0.84 Type III restriction enzyme, res subunit
Mg_chelatase         PF01078.16   207 sp|O34992|OPUCA_BACSU -            380     0.021   13.9   0.0   1   1   8.8e-05     0.041   13.0   0.0     6    55    12    61     7    93 0.87 Magnesium chelatase, subunit ChlI
Arch_ATPase          PF01637.13   234 sp|O34992|OPUCA_BACSU -            380     0.021   14.5   1.0   1   2   0.00033      0.15   11.6   0.0    14    56    24    63    15   203 0.81 Archaeal ATPase
DUF258               PF03193.11   161 sp|O34992|OPUCA_BACSU -            380     0.024   13.8   0.0   1   1   0.00011     0.049   12.8   0.0    22    57    14    50     3    95 0.80 Protein of unknown function, DUF258
AAA_29               PF13555.1     62 sp|O34992|OPUCA_BACSU -            380     0.024   14.1   0.0   1   1    0.0001     0.047   13.2   0.0    17    51    23    56    16    62 0.80 P-loop containing region of AAA domain
AAA_25               PF13481.1    194 sp|O34992|OPUCA_BACSU -            380     0.036   13.4   0.2   1   1   0.00041      0.19   11.1   0.0    30    50    25    45    13    62 0.91 AAA domain
Orthopox_F6          PF06601.7     72 sp|O34992|OPUCA_BACSU -            380     0.036   13.9   0.1   1   1   0.00027      0.13   12.2   0.0    31    59   279   307   265   320 0.83 Orthopoxvirus F6 protein
AAA_28               PF13521.1    163 sp|O34992|OPUCA_BACSU -            380     0.051   13.5   0.1   1   1   0.00031      0.14   12.0   0.0     2    20    31    49    30    64 0.87 AAA domain
G-alpha              PF00503.15   389 sp|O34992|OPUCA_BACSU -            380     0.052   12.2   0.0   1   1   0.00012     0.055   12.1   0.0    61    87    31    57    24   278 0.88 G-protein alpha subunit
AAA_14               PF13173.1    128 sp|O34992|OPUCA_BACSU -            380     0.057   13.3   0.0   1   1   0.00039      0.18   11.7   0.0     3    42    29    68    27   106 0.75 AAA domain
AAA_33               PF13671.1    143 sp|O34992|OPUCA_BACSU -            380     0.084   12.7   0.0   1   1   0.00061      0.28   11.0   0.0     2    19    31    48    30    94 0.81 AAA domain
AAA_5                PF07728.9    139 sp|O34992|OPUCA_BACSU -            380     0.091   12.4   0.0   1   1   0.00052      0.24   11.1   0.0     2    24    31    55    31    84 0.80 AAA domain (dynein-related subfamily)
AAA_23               PF13476.1    202 sp|O34992|OPUCA_BACSU -            380      0.22   11.8   4.6   1   1    0.0007      0.33   11.2   3.4    15    40    21    49     9   279 0.87 AAA domain
BPD_transp_1         PF00528.17   185 sp|O34878|OPUCB_BACSU -            217   1.4e-22   80.1  15.8   1   1   3.4e-26   1.7e-22   79.8  15.8     2   172    30   198    29   208 0.92 Binding-protein-dependent transport system inner membrane component
MotA_ExbB            PF01618.11   139 sp|O34878|OPUCB_BACSU -            217      0.73    9.4   5.0   1   2   0.00011      0.53    9.8   0.8    84   126     8    50     1    64 0.81 MotA/TolQ/ExbB proton channel family
OpuAC                PF04069.7    257 sp|O32243|OPUCC_BACSU -            303   1.8e-62  211.0   1.0   1   1   1.4e-66     2e-62  210.8   1.0     1   257    32   298    32   298 0.97 Substrate binding domain of ABC-type glycine betaine transport system
BPD_transp_1         PF00528.17   185 sp|O34742|OPUCD_BACSU -            229   4.8e-24   84.8  21.5   1   1   8.8e-28   6.5e-24   84.4  21.5     1   183    40   209    40   213 0.93 Binding-protein-dependent transport system inner membrane component
FA_desaturase        PF00487.19   257 sp|O34742|OPUCD_BACSU -            229      0.46    9.8  10.3   1   2   6.8e-06      0.05   13.0   5.8    88   185    20   117     9   147 0.76 Fatty acid desaturase
BCCT                 PF02028.12   485 sp|P54417|OPUD_BACSU -            512  9.6e-201  667.2  42.1   1   1  7.4e-205  1.1e-200  667.0  42.1     1   485     8   490     8   490 0.99 BCCT family transporter
SSF                  PF00474.12   406 sp|O06493|OPUE_BACSU -            492  5.1e-110  367.9  29.3   1   1  9.8e-114  7.3e-110  367.3  29.3     1   406    33   431    33   431 0.98 Sodium:solute symporter family
DUF3810              PF12725.2    318 sp|O06493|OPUE_BACSU -            492      0.21   10.4   1.1   1   1   6.3e-05      0.46    9.3   1.1    13    83   171   250   158   261 0.75 Protein of unknown function (DUF3810)
OTCace               PF00185.19   158 sp|P18186|OTC_BACSU  -            319   7.6e-57  191.5   0.1   2   2   2.2e-58   8.1e-55  185.0   0.1     1   157   154   308   154   309 0.97 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain
OTCace_N             PF02729.16   142 sp|P18186|OTC_BACSU  -            319   2.8e-51  172.9   0.0   1   1   1.3e-54   4.7e-51  172.1   0.0     1   141    12   148    12   149 0.98 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain
Glyco_hydro_101      PF12905.2    425 sp|P18186|OTC_BACSU  -            319     0.029   13.0   0.0   1   1   9.6e-06     0.036   12.7   0.0   136   190   186   240   176   314 0.88 Endo-alpha-N-acetylgalactosaminidase
THF_DHG_CYH_C        PF02882.14   161 sp|P18186|OTC_BACSU  -            319      0.05   12.6   0.1   2   2   4.1e-05      0.15   11.0   0.1    13    94   132   214   124   243 0.79 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain
P5CR_dimer           PF14748.1    107 sp|P0CI77|P5CR1_BACSU -            297   3.6e-36  123.4   0.2   1   1     4e-39   7.4e-36  122.4   0.2     2   107   176   281   175   281 0.98 Pyrroline-5-carboxylate reductase dimerisation
F420_oxidored        PF03807.12    96 sp|P0CI77|P5CR1_BACSU -            297   6.3e-21   74.6   0.3   1   1   7.4e-24   1.4e-20   73.5   0.1     1    96    18   114    18   114 0.97 NADP oxidoreductase coenzyme F420-dependent
Shikimate_DH         PF01488.15   135 sp|P0CI77|P5CR1_BACSU -            297   7.2e-05   22.9   0.4   1   2   2.5e-07   0.00047   20.2   0.0     5    82     9    85     5   129 0.75 Shikimate / quinate 5-dehydrogenase
ApbA                 PF02558.11   151 sp|P0CI77|P5CR1_BACSU -            297   0.00012   21.5   0.0   1   1   1.3e-07   0.00024   20.5   0.0    35   107    40   118    19   142 0.73 Ketopantoate reductase PanE/ApbA
NAD_binding_2        PF03446.10   163 sp|P0CI77|P5CR1_BACSU -            297    0.0041   16.9   0.1   1   1   5.8e-06     0.011   15.6   0.1     2    90    17   108    16   168 0.79 NAD binding domain of 6-phosphogluconate dehydrogenase
OCD_Mu_crystall      PF02423.10   314 sp|P0CI77|P5CR1_BACSU -            297    0.0044   15.8   0.0   1   1   3.3e-06    0.0062   15.3   0.0   128   227    15   114    10   173 0.85 Ornithine cyclodeaminase/mu-crystallin family
NAD_Gly3P_dh_N       PF01210.18   157 sp|P0CI77|P5CR1_BACSU -            297    0.0045   16.7   0.9   1   1   1.2e-05     0.021   14.5   0.9    40   118    49   124    18   153 0.80 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus
Med9                 PF07544.8     83 sp|P0CI77|P5CR1_BACSU -            297     0.087   12.5   0.0   1   1   0.00014      0.25   11.0   0.0    21    57    86   122    75   124 0.86 RNA polymerase II transcription mediator complex subunit 9
P5CR_dimer           PF14748.1    107 sp|P54552|P5CR2_BACSU -            278   1.7e-38  130.9   1.8   2   2   3.2e-41   6.8e-38  128.9   1.1     1   106   159   264   159   265 0.98 Pyrroline-5-carboxylate reductase dimerisation
F420_oxidored        PF03807.12    96 sp|P54552|P5CR2_BACSU -            278   5.7e-23   81.1   0.2   1   1   1.1e-25   2.4e-22   79.1   0.0     1    96     3    98     3    98 0.99 NADP oxidoreductase coenzyme F420-dependent
Shikimate_DH         PF01488.15   135 sp|P54552|P5CR2_BACSU -            278   8.3e-06   25.9   0.0   1   1   1.1e-08   2.3e-05   24.5   0.0    13    83     2    71     1    96 0.81 Shikimate / quinate 5-dehydrogenase
NAD_binding_2        PF03446.10   163 sp|P54552|P5CR2_BACSU -            278   3.4e-05   23.7   0.0   1   1   4.3e-08   9.1e-05   22.3   0.0     1    75     1    80     1   161 0.83 NAD binding domain of 6-phosphogluconate dehydrogenase
ApbA                 PF02558.11   151 sp|P54552|P5CR2_BACSU -            278   0.00032   20.1   0.0   1   1     3e-07   0.00064   19.1   0.0    61   117    51   111     4   140 0.74 Ketopantoate reductase PanE/ApbA
NAD_Gly3P_dh_N       PF01210.18   157 sp|P54552|P5CR2_BACSU -            278     0.014   15.1   0.2   1   1   1.6e-05     0.035   13.8   0.2    40   153    34   141     3   145 0.87 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus
GFO_IDH_MocA         PF01408.17   120 sp|P54552|P5CR2_BACSU -            278     0.025   15.0   0.3   1   2    0.0002      0.42   11.1   0.0     2    72     3    73     2    88 0.83 Oxidoreductase family, NAD-binding Rossmann fold
P5CR_dimer           PF14748.1    107 sp|Q00777|P5CR3_BACSU -            272   3.9e-15   55.7   0.0   1   1   3.2e-18   6.8e-15   55.0   0.0     2   104   159   261   158   264 0.94 Pyrroline-5-carboxylate reductase dimerisation
F420_oxidored        PF03807.12    96 sp|Q00777|P5CR3_BACSU -            272   3.1e-13   49.9   0.0   1   1   5.7e-16   1.2e-12   48.0   0.0     1    96     3    99     3    99 0.96 NADP oxidoreductase coenzyme F420-dependent
ApbA                 PF02558.11   151 sp|Q00777|P5CR3_BACSU -            272     7e-06   25.5   0.0   1   1   5.6e-09   1.2e-05   24.8   0.0    25   105    14   101     4   133 0.79 Ketopantoate reductase PanE/ApbA
NAD_Gly3P_dh_N       PF01210.18   157 sp|Q00777|P5CR3_BACSU -            272   8.1e-05   22.3   0.1   1   1   1.2e-07   0.00025   20.8   0.1    59   131    54   134     3   152 0.77 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus
NAD_binding_2        PF03446.10   163 sp|Q00777|P5CR3_BACSU -            272   0.00011   22.0   0.0   1   2   2.3e-07   0.00048   20.0   0.0     1    93     1    96     1   112 0.81 NAD binding domain of 6-phosphogluconate dehydrogenase
Shikimate_DH         PF01488.15   135 sp|Q00777|P5CR3_BACSU -            272     0.022   14.8   0.0   1   2   9.3e-05       0.2   11.7   0.0    14    70     3    61     1    75 0.81 Shikimate / quinate 5-dehydrogenase
Semialdhyde_dh       PF01118.19   121 sp|Q00777|P5CR3_BACSU -            272     0.069   13.4   0.0   1   1   8.8e-05      0.19   12.0   0.0     2    78     4    75     3   102 0.77 Semialdehyde dehydrogenase, NAD binding domain
Chorismate_bind      PF00425.13   257 sp|P28820|PABB_BACSU -            470   1.5e-95  319.4   0.0   1   1   2.5e-99   1.8e-95  319.1   0.0     2   257   199   452   198   452 0.98 chorismate binding enzyme
Anth_synt_I_N        PF04715.8    140 sp|P28820|PABB_BACSU -            470   1.1e-32  112.9   1.3   1   2     1e-35   7.6e-32  110.2   0.2     4   140    17   150    14   150 0.89 Anthranilate synthase component I, N terminal region
Aminotran_4          PF01063.14   231 sp|P28821|PABC_BACSU -            293   2.9e-44  151.2   0.0   1   1   2.4e-48   3.5e-44  150.9   0.0     1   228    41   270    41   273 0.94 Aminotransferase class IV
PA_decarbox          PF05870.6    160 sp|O07006|PADC_BACSU -            161   1.3e-87  291.2   3.1   1   1     4e-91   1.5e-87  291.0   3.1     1   158     1   159     1   161 0.99 Phenolic acid decarboxylase (PAD)
DUF4285              PF14113.1    115 sp|O07006|PADC_BACSU -            161     0.032   14.2   0.0   1   1   1.4e-05     0.051   13.5   0.0    73   114    81   132    48   143 0.82 Domain of unknown function (DUF4285)
MoaF                 PF10703.4    266 sp|O07006|PADC_BACSU -            161     0.059   12.4   0.0   1   1   2.1e-05     0.077   12.0   0.0    31    92     6    73     1    89 0.78 Molybdenum cofactor biosynthesis protein F
NSP2-B_epitope       PF14757.1    272 sp|O07006|PADC_BACSU -            161      0.17   11.3   0.0   1   1     6e-05      0.22   10.9   0.0   142   189    97   147    90   159 0.79 Immunogenic region of nsp2 protein of arterivirus polyprotein
FMN_bind_2           PF04299.7    169 sp|P21341|PAIB_BACSU -            207   3.6e-54  182.7   0.2   1   2   7.3e-58   3.6e-54  182.7   0.2     1   169     1   162     1   162 0.98 Putative FMN-binding domain
Pyridox_ox_2         PF12900.2    143 sp|P21341|PAIB_BACSU -            207   6.5e-06   26.0   0.0   1   1     2e-09     1e-05   25.4   0.0     2   139    12   162    11   165 0.77 Pyridoxamine 5'-phosphate oxidase
Pyridox_oxidase      PF01243.15    89 sp|P21341|PAIB_BACSU -            207     0.042   13.8   0.0   1   1   2.8e-05      0.14   12.2   0.0     3    88    13   114    12   115 0.66 Pyridoxamine 5'-phosphate oxidase
Pantoate_transf      PF02548.10   261 sp|P52996|PANB_BACSU -            277  4.9e-111  370.0   2.5   1   1  7.4e-115  5.5e-111  369.8   2.5     4   260     3   259     1   260 0.99 Ketopantoate hydroxymethyltransferase
PEP_mutase           PF13714.1    238 sp|P52996|PANB_BACSU -            277   7.9e-06   25.2   0.6   1   2     5e-09   3.7e-05   23.0   0.2     3    67     9    73     7   127 0.86 Phosphoenolpyruvate phosphomutase
Pantoate_ligase      PF02569.10   280 sp|P52998|PANC_BACSU -            286  2.9e-127  423.2   0.1   1   1  2.2e-131  3.3e-127  423.0   0.1     1   280     1   278     1   278 0.99 Pantoate-beta-alanine ligase
Asp_decarbox         PF02261.11   116 sp|P52999|PAND_BACSU -            127     3e-54  181.5   1.0   1   1   4.5e-58   3.4e-54  181.4   1.0     1   115     1   115     1   116 0.99 Aspartate decarboxylase
PQQ_2                PF13360.1    238 sp|P52999|PAND_BACSU -            127    0.0054   16.2   0.0   1   1   8.4e-07    0.0062   16.0   0.0   109   193    17   101     9   120 0.79 PQQ-like domain
ApbA                 PF02558.11   151 sp|O34661|PANE_BACSU -            298   1.8e-32  111.8   0.1   1   1   2.7e-35   2.7e-32  111.3   0.1     1   150     3   146     3   147 0.95 Ketopantoate reductase PanE/ApbA
ApbA_C               PF08546.6    125 sp|O34661|PANE_BACSU -            298   1.7e-29  102.3   0.0   1   1   4.1e-32     4e-29  101.1   0.0     6   125   176   291   171   291 0.95 Ketopantoate reductase PanE/ApbA C terminal
NAD_Gly3P_dh_N       PF01210.18   157 sp|O34661|PANE_BACSU -            298   1.5e-05   24.8   0.0   1   1   2.6e-08   2.6e-05   24.0   0.0     1    95     2    91     2   108 0.85 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus
UDPG_MGDP_dh_N       PF03721.9    185 sp|O34661|PANE_BACSU -            298    0.0002   20.7   0.0   1   1   3.6e-07   0.00035   19.9   0.0     1    50     1    49     1    68 0.90 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain
F420_oxidored        PF03807.12    96 sp|O34661|PANE_BACSU -            298   0.00061   20.1   0.0   1   1   1.9e-06    0.0019   18.6   0.0     1    87     2    91     2    95 0.79 NADP oxidoreductase coenzyme F420-dependent
TrkA_N               PF02254.13   116 sp|O34661|PANE_BACSU -            298    0.0007   19.5   0.0   1   1   1.4e-06    0.0014   18.6   0.0     2    47     4    48     3    92 0.84 TrkA-N domain
DAO                  PF01266.19   358 sp|O34661|PANE_BACSU -            298   0.00077   18.4   0.9   1   2   4.1e-06    0.0041   16.0   0.6     2    31     3    31     2    49 0.80 FAD dependent oxidoreductase
NAD_binding_8        PF13450.1     68 sp|O34661|PANE_BACSU -            298    0.0015   18.4   0.1   1   1   3.3e-06    0.0033   17.4   0.1     1    49     5    58     5    69 0.72 NAD(P)-binding Rossmann-like domain
FAD_binding_3        PF01494.14   356 sp|O34661|PANE_BACSU -            298    0.0039   16.2   0.2   1   1   5.8e-06    0.0057   15.7   0.2     4    45     3    43     1    45 0.92 FAD binding domain
Pyr_redox            PF00070.22    80 sp|O34661|PANE_BACSU -            298     0.019   15.3   0.1   1   1   3.5e-05     0.035   14.5   0.1     1    33     2    33     2    45 0.88 Pyridine nucleotide-disulphide oxidoreductase
NAD_binding_10       PF13460.1    183 sp|O34661|PANE_BACSU -            298     0.029   14.3   0.0   1   1   5.3e-05     0.053   13.5   0.0     1    70     3    75     3   130 0.76 NADH(P)-binding
NAD_binding_2        PF03446.10   163 sp|O34661|PANE_BACSU -            298     0.032   14.0   0.0   1   1   5.4e-05     0.053   13.3   0.0     2    76     1    83     1   110 0.78 NAD binding domain of 6-phosphogluconate dehydrogenase
Shikimate_DH         PF01488.15   135 sp|O34661|PANE_BACSU -            298     0.085   12.9   0.0   1   1   0.00017      0.17   12.0   0.0    14    82     2    72     1   102 0.80 Shikimate / quinate 5-dehydrogenase
NAD_binding_7        PF13241.1    103 sp|O34661|PANE_BACSU -            298     0.094   12.9   0.0   1   1   0.00018      0.18   12.0   0.0     9    75     2    80     1    95 0.70 Putative NAD(P)-binding
Saccharop_dh         PF03435.13   386 sp|O34661|PANE_BACSU -            298      0.11   11.4   0.0   1   1   0.00015      0.15   11.0   0.0     1    42     3    41     3    77 0.87 Saccharopine dehydrogenase
LMWPc                PF01451.16   138 sp|P39155|PAP_BACSU  -            150   1.1e-38  132.7   0.0   1   1   8.1e-43   1.2e-38  132.5   0.0     1   137     3   141     3   142 0.97 Low molecular weight phosphotyrosine protein phosphatase
DNA_topoisoIV        PF00521.15   426 sp|Q45066|PARC_BACSU -            806  2.8e-151  504.2   1.4   1   1  1.3e-154  3.9e-151  503.7   1.4     1   424    31   469    31   471 0.98 DNA gyrase/topoisomerase IV, subunit A
DNA_gyraseA_C        PF03989.8     48 sp|Q45066|PARC_BACSU -            806   2.5e-33  113.1   0.3   3   6   3.1e-06    0.0092   15.2   0.0     1    47   549   598   549   599 0.89 DNA gyrase C-terminal domain, beta-propeller
DNA_gyraseA_C        PF03989.8     48 sp|Q45066|PARC_BACSU -            806   2.5e-33  113.1   0.3   4   6   1.2e-07   0.00036   19.7   0.0     2    48   606   651   605   651 0.93 DNA gyrase C-terminal domain, beta-propeller
DNA_gyraseA_C        PF03989.8     48 sp|Q45066|PARC_BACSU -            806   2.5e-33  113.1   0.3   5   6   2.7e-14   8.1e-11   41.0   0.0     2    43   655   696   654   699 0.97 DNA gyrase C-terminal domain, beta-propeller
DNA_gyraseA_C        PF03989.8     48 sp|Q45066|PARC_BACSU -            806   2.5e-33  113.1   0.3   6   6   3.4e-09     1e-05   24.7   0.0     1    47   704   752   704   753 0.93 DNA gyrase C-terminal domain, beta-propeller
Atg14                PF10186.4    302 sp|Q45066|PARC_BACSU -            806      0.24   10.3   4.1   1   1   0.00013      0.39    9.6   4.1    53   129   418   493   373   500 0.78 UV radiation resistance protein and autophagy-related subunit 14
DNA_gyraseB          PF00204.20   173 sp|Q59192|PARE_BACSU -            655   8.3e-58  194.4   1.2   1   1   5.3e-61   1.3e-57  193.7   1.2     1   172   223   393   223   394 0.98 DNA gyrase B
DNA_gyraseB_C        PF00986.16    65 sp|Q59192|PARE_BACSU -            655   6.7e-31  105.8   0.5   1   1     5e-34   1.2e-30  104.9   0.5     3    65   568   630   566   630 0.97 DNA gyrase B subunit, carboxyl terminus
Toprim               PF01751.17   100 sp|Q59192|PARE_BACSU -            655   4.2e-25   87.6   0.0   1   1   3.9e-28   9.6e-25   86.4   0.0     1    98   424   534   424   536 0.97 Toprim domain
HATPase_c            PF02518.21   111 sp|Q59192|PARE_BACSU -            655   7.8e-17   60.9   0.1   1   1   6.4e-20   1.6e-16   60.0   0.1     2    95    35   139    34   175 0.92 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
HATPase_c_3          PF13589.1    137 sp|Q59192|PARE_BACSU -            655    0.0011   18.6   0.0   1   1   1.1e-06    0.0028   17.3   0.0     7    47    43    83    38   138 0.87 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
Phage_antitermQ      PF06530.7    126 sp|Q59192|PARE_BACSU -            655      0.14   11.7   0.0   1   1   0.00012       0.3   10.6   0.0    52   114   355   416   326   425 0.89 Phage antitermination protein Q
Aminotran_1_2        PF00155.16   363 sp|P16524|PATA_BACSU -            393   3.6e-67  226.8   0.0   1   1   1.9e-70   4.1e-67  226.6   0.0     2   363    29   375    28   375 0.95 Aminotransferase class I and II
DegT_DnrJ_EryC1      PF01041.12   363 sp|P16524|PATA_BACSU -            393   2.9e-10   39.7   0.1   1   1   3.2e-13   6.7e-10   38.5   0.0    42   119    91   167    49   201 0.74 DegT/DnrJ/EryC1/StrS aminotransferase family
Aminotran_5          PF00266.14   371 sp|P16524|PATA_BACSU -            393   1.6e-06   27.0   0.0   1   2   2.2e-09   4.8e-06   25.5   0.0    56   175    84   200    46   204 0.82 Aminotransferase class-V
Cys_Met_Meta_PP      PF01053.15   386 sp|P16524|PATA_BACSU -            393   4.8e-06   25.1   0.0   1   1   3.6e-09   7.7e-06   24.4   0.0    71   180    89   203    77   216 0.81 Cys/Met metabolism PLP-dependent enzyme
Alliinase_C          PF04864.8    363 sp|P16524|PATA_BACSU -            393   0.00041   19.1   0.0   1   1   2.9e-07   0.00062   18.5   0.0    69   240    92   276    60   308 0.67 Allinase
OKR_DC_1             PF01276.15   417 sp|P16524|PATA_BACSU -            393     0.016   13.7   0.0   1   1   1.6e-05     0.034   12.6   0.0    78   145    85   152    64   163 0.87 Orn/Lys/Arg decarboxylase, major domain
Aminotran_MocR       PF12897.2    425 sp|P16524|PATA_BACSU -            393     0.075   11.5   0.0   1   2   0.00011      0.24    9.9   0.0   127   206   116   194   101   232 0.78 Alanine-glyoxylate amino-transferase
Transgly             PF00912.17   178 sp|P39793|PBPA_BACSU -            914   2.5e-65  219.1   0.0   1   1   1.2e-68   4.3e-65  218.3   0.0     2   178    84   260    83   260 0.98 Transglycosylase
Transpeptidase       PF00905.17   304 sp|P39793|PBPA_BACSU -            914   8.1e-58  195.8  14.5   1   2   3.2e-61   1.2e-57  195.2   6.3     1   302   352   639   352   641 0.92 Penicillin binding protein transpeptidase domain
fn3                  PF00041.16    85 sp|P39793|PBPA_BACSU -            914     3e-05   24.0   0.2   1   1   8.2e-09     3e-05   24.0   0.2     8    85   714   784   707   784 0.81 Fibronectin type III domain
Transpeptidase       PF00905.17   304 sp|Q07868|PBPB_BACSU -            716   3.4e-92  308.7   7.5   1   1   2.5e-95   9.2e-92  307.3   7.5     2   303   269   576   268   577 0.96 Penicillin binding protein transpeptidase domain
PBP_dimer            PF03717.10   179 sp|Q07868|PBPB_BACSU -            716   2.2e-30  106.0   8.3   1   3   8.9e-34   3.3e-30  105.4   2.1     1   177    60   226    60   228 0.92 Penicillin-binding Protein dimerisation domain
PASTA                PF03793.14    63 sp|Q07868|PBPB_BACSU -            716   4.7e-18   64.6   2.6   1   2   2.7e-12     1e-08   34.6   0.6     2    62   602   656   601   657 0.97 PASTA domain
PASTA                PF03793.14    63 sp|Q07868|PBPB_BACSU -            716   4.7e-18   64.6   2.6   2   2   2.2e-10     8e-07   28.6   0.1     1    60   659   711   659   713 0.96 PASTA domain
DUF223               PF02721.9     95 sp|Q07868|PBPB_BACSU -            716     0.018   15.0   0.0   1   1     2e-05     0.076   13.1   0.0     6    50   234   282   230   286 0.90 Domain of unknown function DUF223
Transpeptidase       PF00905.17   304 sp|P42971|PBPC_BACSU -            668   5.6e-79  265.3   7.8   1   1   2.9e-82   1.1e-78  264.3   7.8     1   302   352   664   352   666 0.97 Penicillin binding protein transpeptidase domain
MecA_N               PF05223.6    118 sp|P42971|PBPC_BACSU -            668     3e-37  127.2   9.1   1   4   8.1e-41     3e-37  127.2   9.1     1   117    25   147    25   148 0.97 NTF2-like N-terminal transpeptidase domain
PBP_dimer            PF03717.10   179 sp|P42971|PBPC_BACSU -            668   4.5e-37  127.8   2.9   1   1   3.4e-40   1.2e-36  126.4   2.9     2   177   155   322   154   324 0.92 Penicillin-binding Protein dimerisation domain
Lumazine_bd          PF12870.2    111 sp|P42971|PBPC_BACSU -            668     0.025   14.6   6.2   1   1   3.8e-05      0.14   12.2   6.2     2   104    20   123    19   133 0.80 Lumazine-binding domain
Transgly             PF00912.17   178 sp|P40750|PBPD_BACSU -            624   2.7e-63  212.5   0.0   1   1   1.6e-66   4.7e-63  211.7   0.0     2   177    63   239    62   240 0.97 Transglycosylase
Transpeptidase       PF00905.17   304 sp|P40750|PBPD_BACSU -            624   1.2e-28  100.0   5.7   1   1   7.9e-32   2.3e-28   99.0   5.7     1   288   350   599   350   613 0.92 Penicillin binding protein transpeptidase domain
SHOCT                PF09851.4     31 sp|P40750|PBPD_BACSU -            624      0.12   11.9   0.3   1   1     8e-05      0.24   10.9   0.3     3    23   231   251   229   256 0.83 Short C-terminal domain
PHBC_N               PF12551.3     46 sp|P40750|PBPD_BACSU -            624      0.16   11.5   0.0   1   1   0.00011      0.33   10.4   0.0     9    34   475   500   470   501 0.92 Poly-beta-hydroxybutyrate polymerase N terminal
Phasin               PF05597.6    132 sp|P40750|PBPD_BACSU -            624       0.2   11.3   3.8   1   2   0.00028      0.82    9.4   0.3    41    96   280   335   274   343 0.84 Poly(hydroxyalcanoate) granule associated protein (phasin)
Beta-lactamase       PF00144.19   330 sp|P32959|PBPE_BACSU -            451   2.2e-61  207.7   0.0   1   1   3.8e-65   2.8e-61  207.3   0.0     3   318    11   336     9   346 0.92 Beta-lactamase
DUF3471              PF11954.3    100 sp|P32959|PBPE_BACSU -            451   6.1e-18   64.5   0.1   1   1   1.9e-21   1.4e-17   63.3   0.1     2    98   358   449   357   451 0.91 Domain of unknown function (DUF3471)
Transgly             PF00912.17   178 sp|P38050|PBPF_BACSU -            714   1.7e-68  229.4   0.0   1   1   5.5e-72   2.7e-68  228.7   0.0     2   177    56   230    55   231 0.98 Transglycosylase
Transpeptidase       PF00905.17   304 sp|P38050|PBPF_BACSU -            714   1.7e-54  184.9   4.6   1   1   6.1e-58     3e-54  184.1   4.6     1   303   322   594   322   595 0.98 Penicillin binding protein transpeptidase domain
MutS_I               PF01624.15   113 sp|P38050|PBPF_BACSU -            714     0.015   15.2   0.4   1   2   1.9e-05     0.094   12.7   0.1     9    97    74   162    72   171 0.84 MutS domain I
Transgly             PF00912.17   178 sp|P70997|PBPG_BACSU -            691   1.2e-67  226.6   0.2   1   1   4.6e-71   2.3e-67  225.7   0.2     2   177    62   237    61   238 0.97 Transglycosylase
Transpeptidase       PF00905.17   304 sp|P70997|PBPG_BACSU -            691   4.1e-34  117.9   3.1   1   1   2.2e-37   1.1e-33  116.6   3.1     4   304   330   605   327   605 0.85 Penicillin binding protein transpeptidase domain
eIF-3_zeta           PF05091.7    516 sp|P70997|PBPG_BACSU -            691     0.017   13.7   0.2   1   1   4.7e-06     0.023   13.3   0.2   146   236   227   316   125   341 0.88 Eukaryotic translation initiation factor 3 subunit 7 (eIF-3)
Transpeptidase       PF00905.17   304 sp|Q796K8|PBPH_BACSU -            704   6.6e-80  268.3  12.6   2   2   1.4e-82   5.2e-79  265.4   9.2     2   302   373   690   372   692 0.98 Penicillin binding protein transpeptidase domain
PBP_dimer            PF03717.10   179 sp|Q796K8|PBPH_BACSU -            704   6.6e-37  127.2   5.4   1   1   4.5e-40   1.7e-36  125.9   5.4     2   178    63   327    62   328 0.92 Penicillin-binding Protein dimerisation domain
ATP-synt_B           PF00430.13   132 sp|Q796K8|PBPH_BACSU -            704      0.18   11.6   2.0   2   2   7.2e-05      0.27   11.0   0.0    22    50   580   608   569   613 0.91 ATP synthase B/B' CF(0)
DUF3988              PF13149.1    284 sp|Q796K8|PBPH_BACSU -            704      0.54    9.7  10.1   1   1   7.8e-06     0.029   13.8   4.1    53   116   616   679   598   690 0.65 Protein of unknown function (DUF3988)
Transpeptidase       PF00905.17   304 sp|O32032|PBPI_BACSU -            584   3.8e-72  242.8   3.3   1   1   1.1e-75   5.6e-72  242.3   3.3     1   303   263   573   263   574 0.97 Penicillin binding protein transpeptidase domain
PBP_dimer            PF03717.10   179 sp|O32032|PBPI_BACSU -            584   1.6e-18   67.3   2.6   1   2     1e-21   5.1e-18   65.7   0.0     4   175    59   220    56   224 0.89 Penicillin-binding Protein dimerisation domain
Sigma70_r3           PF04539.11    78 sp|O32032|PBPI_BACSU -            584    0.0055   16.5   0.0   1   1   4.2e-06     0.021   14.7   0.0    26    53    96   123    93   130 0.93 Sigma-70 region 3
Beta-lactamase       PF00144.19   330 sp|O31773|PBPX_BACSU -            391   4.9e-54  183.5   0.0   1   1   3.5e-57   6.6e-54  183.1   0.0    17   320    97   380    83   389 0.93 Beta-lactamase
DUF1510              PF07423.6    217 sp|O31773|PBPX_BACSU -            391    0.0013   18.1   4.3   1   1   1.1e-06     0.002   17.5   4.3     2    72     7    77     6    92 0.69 Protein of unknown function (DUF1510)
ABC2_membrane_3      PF12698.2    344 sp|O31773|PBPX_BACSU -            391    0.0026   16.8   0.8   1   2   1.4e-06    0.0026   16.8   0.8     4   146    24   161    21   230 0.72 ABC-2 family transporter protein
CCD                  PF07860.6    141 sp|O31773|PBPX_BACSU -            391     0.041   13.3   0.3   1   1     5e-05     0.093   12.1   0.3    65   106    44    85    34    96 0.86 WisP family C-Terminal Region
DUF4635              PF15466.1    135 sp|O31773|PBPX_BACSU -            391     0.041   13.1   0.3   1   1   4.1e-05     0.076   12.3   0.3    21    93    12    85     3    92 0.81 Domain of unknown function (DUF4635)
DUF3357              PF11837.3    107 sp|O31773|PBPX_BACSU -            391       0.1   12.4   0.1   1   1   9.4e-05      0.17   11.7   0.1    16    76     4    68     1    82 0.70 Domain of unknown function (DUF3357)
PH_4                 PF15404.1    185 sp|O31773|PBPX_BACSU -            391      0.26   10.7   3.7   1   1     7e-05      0.13   11.7   1.5   103   166    31   102    29   104 0.67 Pleckstrin homology domain
MFS_1                PF07690.11   352 sp|Q797E3|PBUE_BACSU -            388   1.5e-42  145.6  54.1   1   2   7.6e-44   2.8e-40  138.1  44.1     3   330    10   320     8   323 0.84 Major Facilitator Superfamily
MFS_1                PF07690.11   352 sp|Q797E3|PBUE_BACSU -            388   1.5e-42  145.6  54.1   2   2     6e-07    0.0022   16.7   1.8   103   183   307   386   306   388 0.82 Major Facilitator Superfamily
Sugar_tr             PF00083.19   451 sp|Q797E3|PBUE_BACSU -            388   1.5e-07   30.4  38.8   1   2   3.1e-10   1.2e-06   27.4  15.9    48   189    40   176    27   183 0.89 Sugar (and other) transporter
Sugar_tr             PF00083.19   451 sp|Q797E3|PBUE_BACSU -            388   1.5e-07   30.4  38.8   2   2   0.00025      0.91    8.0  14.4    43   189   221   376   198   381 0.76 Sugar (and other) transporter
MFS_2                PF13347.1    428 sp|Q797E3|PBUE_BACSU -            388   2.3e-07   29.5  35.8   1   2     6e-06     0.022   13.1   9.1   265   377    43   150     7   152 0.87 MFS/sugar transport protein
MFS_2                PF13347.1    428 sp|Q797E3|PBUE_BACSU -            388   2.3e-07   29.5  35.8   2   2   8.4e-08   0.00031   19.2  22.5   166   397   148   362   126   378 0.81 MFS/sugar transport protein
MFS_3                PF05977.8    524 sp|Q797E3|PBUE_BACSU -            388   0.00045   18.4  22.9   1   2   2.6e-05     0.098   10.7  10.3   233   386    18   170     3   196 0.75 Transmembrane secretion effector
MFS_3                PF05977.8    524 sp|Q797E3|PBUE_BACSU -            388   0.00045   18.4  22.9   2   2   3.7e-06     0.014   13.5   4.5   262   396   243   377   222   388 0.77 Transmembrane secretion effector
Xan_ur_permease      PF00860.15   389 sp|O34987|PBUG_BACSU -            440   3.1e-46  157.6  53.6   1   2   2.1e-50   3.1e-46  157.6  53.6     2   388    16   402    15   403 0.92 Permease family
Xan_ur_permease      PF00860.15   389 sp|O34978|PBUO_BACSU -            432   2.6e-85  286.2  49.1   1   1   4.2e-89   3.1e-85  286.0  49.1     1   388    12   395    12   396 0.97 Permease family
DUF4538              PF15061.1     58 sp|O34978|PBUO_BACSU -            432     0.032   13.5   0.7   1   1     3e-05      0.22   10.8   0.7     8    36    49    80    46    89 0.75 Domain of unknown function (DUF4538)
Xan_ur_permease      PF00860.15   389 sp|P42086|PBUX_BACSU -            438  7.7e-126  419.6  48.8   1   1  1.4e-129    1e-125  419.2  48.8     2   388     7   385     6   386 0.99 Permease family
UPF0154              PF03672.8     64 sp|P42086|PBUX_BACSU -            438      0.37   10.4   4.0   2   2     7e-05      0.52    9.9   0.9     4    19   183   198   180   208 0.82 Uncharacterised protein family (UPF0154)
Carboxyl_trans       PF01039.17   493 sp|P54541|PCCB_BACSU -            507    7e-191  634.8   0.1   1   1  1.6e-194  7.9e-191  634.6   0.1     1   493    26   505    26   505 0.97 Carboxyl transferase domain
MdcE                 PF06833.6    234 sp|P54541|PCCB_BACSU -            507   0.00092   18.4   0.1   2   2   6.9e-07    0.0034   16.6   0.1    65   150   346   431   309   441 0.85 Malonate decarboxylase gamma subunit (MdcE)
BIV_Env              PF05858.7    548 sp|P54541|PCCB_BACSU -            507      0.18    9.7   0.0   1   1   4.7e-05      0.23    9.3   0.0     7    94    11   103     1   109 0.74 Bovine immunodeficiency virus surface protein (SU)
PEPCK_ATP            PF01293.15   467 sp|P54418|PCKA_BACSU -            527  7.4e-228  756.6   0.0   1   1    4e-231  8.5e-228  756.4   0.0     3   467    17   482    15   482 0.99 Phosphoenolpyruvate carboxykinase
AAA_24               PF13479.1    213 sp|P54418|PCKA_BACSU -            527    0.0043   16.6   0.0   1   1   3.8e-06     0.008   15.7   0.0     7    55   230   274   225   318 0.79 AAA domain
AAA_16               PF13191.1    185 sp|P54418|PCKA_BACSU -            527     0.019   14.9   0.0   1   1   2.2e-05     0.047   13.6   0.0    17    63   218   273   210   365 0.69 AAA ATPase domain
AAA_17               PF13207.1    121 sp|P54418|PCKA_BACSU -            527     0.095   13.5   0.1   1   1   0.00016      0.34   11.7   0.0     3    24   230   257   228   343 0.67 AAA domain
AAA_29               PF13555.1     62 sp|P54418|PCKA_BACSU -            527     0.096   12.2   0.5   1   1    0.0002      0.41   10.1   0.1    18    39   221   242   216   252 0.87 P-loop containing region of AAA domain
AAA_33               PF13671.1    143 sp|P54418|PCKA_BACSU -            527       0.1   12.4   0.0   1   1    0.0001      0.21   11.4   0.0     1    18   228   245   228   265 0.89 AAA domain
AAA_25               PF13481.1    194 sp|P54418|PCKA_BACSU -            527      0.14   11.5   0.0   1   1   0.00011      0.23   10.8   0.0    31    52   224   245   202   282 0.86 AAA domain
Peptidase_C15        PF01470.12   203 sp|P28618|PCP_BACSU  -            215   2.4e-94  314.8   0.1   1   1   5.7e-98   2.8e-94  314.6   0.1     1   202     3   203     3   204 0.99 Pyroglutamyl peptidase
MGDG_synth           PF06925.6    169 sp|P28618|PCP_BACSU  -            215     0.026   14.4   0.0   1   1     1e-05      0.05   13.4   0.0    60    96    33    69    24    79 0.85 Monogalactosyldiacylglycerol (MGDG) synthase
ETF                  PF01012.16   164 sp|P28618|PCP_BACSU  -            215     0.061   13.0   0.0   1   1   2.5e-05      0.12   12.0   0.0    80   112    52    86    45    93 0.90 Electron transfer flavoprotein domain
UvrD_C               PF13361.1    351 sp|O34580|PCRA_BACSU -            739    3e-105  352.5   7.0   1   1  4.7e-108  5.8e-105  351.6   7.0     1   350   280   622   280   623 0.96 UvrD-like helicase C-terminal domain
UvrD-helicase        PF00580.16   315 sp|O34580|PCRA_BACSU -            739   5.6e-83  278.8   0.0   1   2   4.5e-86   5.6e-83  278.8   0.0     1   315    12   275    12   275 0.98 UvrD/REP helicase N-terminal domain
AAA_19               PF13245.1     76 sp|O34580|PCRA_BACSU -            739   8.3e-15   54.3   0.0   1   1   2.9e-17   3.6e-14   52.2   0.0     2    75    19    95    18    96 0.89 Part of AAA domain
UvrD_C_2             PF13538.1    104 sp|O34580|PCRA_BACSU -            739   2.4e-12   46.9   0.1   1   1   1.4e-14   1.7e-11   44.1   0.0    15   103   524   618   503   619 0.84 UvrD-like helicase C-terminal domain
Viral_helicase1      PF01443.13   234 sp|O34580|PCRA_BACSU -            739   1.5e-05   24.6   0.0   2   3   0.00073       0.9    9.0   0.0    58   109   214   264   182   316 0.79 Viral (Superfamily 1) RNA helicase
Viral_helicase1      PF01443.13   234 sp|O34580|PCRA_BACSU -            739   1.5e-05   24.6   0.0   3   3    0.0004       0.5    9.8   0.0   183   232   554   618   489   620 0.70 Viral (Superfamily 1) RNA helicase
AAA_30               PF13604.1    196 sp|O34580|PCRA_BACSU -            739   1.8e-05   24.4   0.0   1   1   6.2e-08   7.7e-05   22.3   0.0     2    67    12    77    11   119 0.83 AAA domain
Exonuc_V_gamma       PF04257.9    805 sp|O34580|PCRA_BACSU -            739   6.2e-05   21.2   2.3   2   2   6.3e-08   7.8e-05   20.8   0.3   521   673   450   603   427   618 0.66 Exodeoxyribonuclease V, gamma subunit
AAA_16               PF13191.1    185 sp|O34580|PCRA_BACSU -            739     0.004   17.1   0.2   1   2   0.00029      0.36   10.7   0.0    18   185    19   249     6   249 0.55 AAA ATPase domain
DEAD                 PF00270.24   169 sp|O34580|PCRA_BACSU -            739     0.052   13.0   0.3   1   1   0.00031      0.38   10.2   0.3     2    78    14    79    13   252 0.74 DEAD/DEAH box helicase
AAA_22               PF13401.1    131 sp|O34580|PCRA_BACSU -            739     0.094   12.8   0.8   1   1   0.00058      0.72    9.9   0.0     4   100    24   123    19   137 0.80 AAA domain
ResIII               PF04851.10   184 sp|O34580|PCRA_BACSU -            739      0.12   12.2   1.6   1   1   0.00024       0.3   10.8   0.1     5    71    13   100    10   250 0.64 Type III restriction enzyme, res subunit
DUF964               PF06133.6    108 sp|O34580|PCRA_BACSU -            739      0.28   11.2   5.6   2   2   0.00028      0.34   10.9   2.1     6    53   480   526   477   531 0.89 Protein of unknown function (DUF964)
PcrB                 PF01884.12   231 sp|O34790|PCRB_BACSU -            228   4.1e-91  304.3   1.1   1   1   1.5e-94   4.6e-91  304.1   1.1     1   230     2   225     2   226 0.98 PcrB family
His_biosynth         PF00977.16   229 sp|O34790|PCRB_BACSU -            228    0.0044   16.3   0.1   2   2   5.8e-06     0.017   14.3   0.1    62   111   168   217   162   227 0.83 Histidine biosynthesis protein
Trp_syntA            PF00290.15   259 sp|O34790|PCRB_BACSU -            228    0.0068   14.9   0.8   2   2   7.1e-06     0.021   13.3   0.1   189   235   170   217   161   226 0.80 Tryptophan synthase alpha chain
Ribul_P_3_epim       PF00834.14   201 sp|O34790|PCRB_BACSU -            228     0.023   13.8   0.1   1   1     2e-05      0.06   12.4   0.1   149   199   164   213   161   214 0.82 Ribulose-phosphate 3 epimerase family
Polysacc_deac_1      PF01522.16   124 sp|O34928|PDAA_BACSU -            263     4e-35  120.1   0.1   1   2   1.8e-38   8.7e-35  119.0   0.0     2   123    61   184    60   185 0.97 Polysaccharide deacetylase
Sulfatase            PF00884.18   308 sp|O34928|PDAA_BACSU -            263     0.004   16.3   0.0   1   1   1.8e-06    0.0089   15.2   0.0    25   158   106   238    95   249 0.85 Sulfatase
3H                   PF02829.9     98 sp|O34928|PDAA_BACSU -            263      0.14   12.1   0.8   2   2    0.0002      0.99    9.4   0.0    73    96   221   244   197   246 0.94 3H domain
Polysacc_deac_1      PF01522.16   124 sp|P50865|PDAB_BACSU -            254   3.5e-25   88.0   0.0   1   1   8.9e-29   6.6e-25   87.1   0.0     2   123    52   175    51   176 0.96 Polysaccharide deacetylase
Peripla_BP_4         PF13407.1    257 sp|P50865|PDAB_BACSU -            254     0.018   14.3   1.0   2   2   6.8e-05       0.5    9.6   0.5    16    99   160   252   156   254 0.83 Periplasmic binding protein domain
Polysacc_deac_1      PF01522.16   124 sp|O34798|PDAC_BACSU -            467   4.7e-34  116.6   0.0   2   2   4.1e-37   1.5e-33  115.0   0.0     3   115   274   387   272   393 0.95 Polysaccharide deacetylase
DUF4163              PF13739.1    101 sp|O34798|PDAC_BACSU -            467   1.1e-14   54.9   4.1   1   2   3.1e-18   1.1e-14   54.9   4.1     2   101    48   139    47   139 0.92 Domain of unknown function (DUF4163)
DUF3298              PF11738.3     78 sp|O34798|PDAC_BACSU -            467   2.3e-09   37.6   9.3   2   2   7.7e-13   2.8e-09   37.3   0.6     1    77   155   235   155   236 0.83 Protein of unknown function (DUF3298)
DUF3139              PF11337.3     85 sp|O34798|PDAC_BACSU -            467      0.25   11.6   0.2   1   4   6.7e-05      0.25   11.6   0.2     3    41     4    40     2    52 0.91 Protein of unknown function (DUF3139)
Glycos_transf_3      PF00591.16   253 sp|P39142|PDP_BACSU  -            433   4.7e-50  170.3   7.0   1   1   2.3e-53     7e-50  169.7   7.0     3   253    77   306    75   306 0.98 Glycosyl transferase family, a/b domain
PYNP_C               PF07831.8     75 sp|P39142|PDP_BACSU  -            433   9.1e-30  101.9   1.7   2   2   3.1e-33   9.1e-30  101.9   1.7     1    75   345   418   345   418 0.98 Pyrimidine nucleoside phosphorylase C-terminal domain
Glycos_trans_3N      PF02885.12    66 sp|P39142|PDP_BACSU  -            433   3.6e-17   61.6   2.7   1   3   1.5e-18   4.6e-15   54.9   0.0     2    65     3    66     2    67 0.97 Glycosyl transferase family, helical bundle domain
Biotin_lipoyl        PF00364.17    74 sp|P39142|PDP_BACSU  -            433   0.00042   19.9   0.5   2   2   0.00014      0.42   10.2   0.0    20    38   380   398   373   404 0.85 Biotin-requiring enzyme
Phasin               PF05597.6    132 sp|P39142|PDP_BACSU  -            433     0.035   13.8   0.1   1   1   5.2e-05      0.16   11.7   0.4    25    61   202   238   181   298 0.87 Poly(hydroxyalcanoate) granule associated protein (phasin)
Kinase-PPPase        PF03618.9    255 sp|P54470|PDRP_BACSU -            270   1.1e-95  320.0   0.0   1   1   2.5e-99   1.2e-95  319.8   0.0     1   254     6   262     6   263 0.98 Kinase/pyrophosphorylase
IF-2                 PF11987.3    109 sp|P54470|PDRP_BACSU -            270     0.029   14.2   0.3   1   1   1.6e-05     0.081   12.8   0.3    51   108    43    99     5   100 0.74 Translation-initiation factor 2
Cob_adeno_trans      PF01923.13   163 sp|O34899|PDUO_BACSU -            193   5.5e-62  208.3   0.0   1   1   8.6e-66   6.3e-62  208.1   0.0     1   163     3   168     3   168 0.98 Cobalamin adenosyltransferase
ATP-cone             PF03477.11    90 sp|O34899|PDUO_BACSU -            193     0.006   16.9   0.2   1   1   1.9e-06     0.014   15.8   0.1    37    83   125   167   116   171 0.90 ATP cone domain
Phos_pyr_kin         PF08543.7    246 sp|P39610|PDXK_BACSU -            271   1.2e-87  293.2   4.4   1   1   2.7e-91   1.3e-87  293.0   4.4     1   245    13   260    13   261 0.97 Phosphomethylpyrimidine kinase
PfkB                 PF00294.19   301 sp|P39610|PDXK_BACSU -            271   2.9e-15   56.1   0.9   1   1   7.9e-19   3.9e-15   55.7   0.9   165   290   119   248    80   255 0.83 pfkB family carbohydrate kinase
HK                   PF02110.10   246 sp|P39610|PDXK_BACSU -            271   0.00034   19.8   1.5   1   1   1.1e-07   0.00052   19.2   1.5    55   219    78   246    59   260 0.68 Hydroxyethylthiazole kinase family
SOR_SNZ              PF01680.12   209 sp|P37527|PDXS_BACSU -            294    6e-114  378.8   9.6   1   1  4.5e-117  8.3e-114  378.3   9.6     2   209     5   212     4   212 0.99 SOR/SNZ family
ThiG                 PF05690.9    247 sp|P37527|PDXS_BACSU -            294   6.5e-09   35.2   8.6   2   2   1.8e-10   3.4e-07   29.5   0.2   167   224   196   255   173   269 0.86 Thiazole biosynthesis protein ThiG
Dus                  PF01207.12   310 sp|P37527|PDXS_BACSU -            294   7.3e-05   21.7   0.1   2   2   1.6e-05      0.03   13.1   0.0   170   225   191   249   182   276 0.78 Dihydrouridine synthase (Dus)
NanE                 PF04131.9    192 sp|P37527|PDXS_BACSU -            294    0.0005   19.0   1.5   2   2   1.1e-05     0.021   13.8   0.0   134   189   193   250   181   255 0.72 Putative N-acetylmannosamine-6-phosphate epimerase
OMPdecase            PF00215.19   226 sp|P37527|PDXS_BACSU -            294   0.00091   18.6   0.1   1   2   0.00031      0.57    9.5   0.1    79   158   136   212   132   222 0.80 Orotidine 5'-phosphate decarboxylase / HUMPS family
NMO                  PF03060.10   330 sp|P37527|PDXS_BACSU -            294    0.0012   18.0   7.6   2   2     1e-06    0.0018   17.4   0.1   181   241   195   254   113   277 0.80 Nitronate monooxygenase
IGPS                 PF00218.16   254 sp|P37527|PDXS_BACSU -            294    0.0022   17.1   0.9   2   2   5.4e-06    0.0099   14.9   0.0   210   253   207   250   156   251 0.81 Indole-3-glycerol phosphate synthase
His_biosynth         PF00977.16   229 sp|P37527|PDXS_BACSU -            294     0.003   16.8   2.9   2   2   1.4e-05     0.025   13.8   0.1   176   225   189   240   146   244 0.79 Histidine biosynthesis protein
SNO                  PF01174.14   188 sp|P37528|PDXT_BACSU -            196   1.2e-85  285.9   0.0   1   1   7.3e-89   1.3e-85  285.7   0.0     1   187     6   188     6   189 0.99 SNO glutamine amidotransferase family
GATase_3             PF07685.9    158 sp|P37528|PDXT_BACSU -            196   9.7e-13   48.0   0.0   1   1   6.5e-16   1.2e-12   47.6   0.0     2   151    33   171    32   178 0.81 CobB/CobQ-like glutamine amidotransferase domain
GATase               PF00117.23   192 sp|P37528|PDXT_BACSU -            196   6.7e-10   38.7   0.1   1   1   5.6e-13     1e-09   38.1   0.1    14   180    17   178    10   189 0.69 Glutamine amidotransferase class-I
Peptidase_S51        PF03575.12   154 sp|P37528|PDXT_BACSU -            196   1.7e-06   27.8   0.0   1   1   1.4e-09   2.5e-06   27.3   0.0    31    90    34    93    10   110 0.90 Peptidase family S51
DJ-1_PfpI            PF01965.19   147 sp|P37528|PDXT_BACSU -            196   2.4e-06   27.0   0.0   1   1     4e-09   7.5e-06   25.4   0.0    36    86    37    87    24   119 0.88 DJ-1/PfpI family
DUF4066              PF13278.1    166 sp|P37528|PDXT_BACSU -            196   0.00059   19.1   0.0   1   1   6.6e-07    0.0012   18.1   0.0    55   108    32    87     8    89 0.89 Putative amidotransferase
Peptidase_C26        PF07722.8    217 sp|P37528|PDXT_BACSU -            196   0.00081   18.8   0.2   1   1   6.1e-06     0.011   15.1   0.2    54   133    34    99    12   172 0.74 Peptidase C26
zf-C4_Topoisom       PF01396.14    39 sp|P37528|PDXT_BACSU -            196     0.053   13.0   0.0   2   2   0.00024      0.45   10.0   0.0    17    29   160   172   155   172 0.88 Topoisomerase DNA binding C4 zinc finger
Pec_lyase_C          PF00544.14   201 sp|O34819|PEL1_BACSU -            345   1.6e-50  171.3   5.8   1   1   1.5e-54   2.3e-50  170.8   5.8     3   201    82   273    80   273 0.95 Pectate lyase
Peptidase_M3         PF01432.15   458 sp|O31605|PEPF_BACSU -            670   1.1e-87  295.0   4.9   1   1   4.5e-91   1.7e-87  294.4   4.9     3   457   272   651   270   652 0.95 Peptidase family M3
Peptidase_M3_N       PF08439.5     70 sp|O31605|PEPF_BACSU -            670   5.3e-23   80.8   3.2   1   2   1.4e-26   5.3e-23   80.8   3.2     1    70   181   250   181   250 0.99 Oligopeptidase F
ALIX_LYPXL_bnd       PF13949.1    296 sp|O31605|PEPF_BACSU -            670      0.02   13.8   1.0   1   2   1.7e-05     0.064   12.2   0.1   210   287    96   173    84   176 0.89 ALIX V-shaped domain binding to HIV
Peptidase_MA_2       PF13485.1    128 sp|O31605|PEPF_BACSU -            670       2.1    8.4  10.0   2   2   0.00011      0.42   10.6   0.4    10    49   437   474   425   540 0.77 Peptidase MA superfamily
Peptidase_M20        PF01546.23   189 sp|P55179|PEPT_BACSU -            410     4e-19   68.8   0.1   1   1   1.2e-22   6.2e-19   68.2   0.1    35   188   141   404   138   405 0.90 Peptidase family M20/M25/M40
M20_dimer            PF07687.9    112 sp|P55179|PEPT_BACSU -            410   1.7e-12   47.0   0.0   1   1   7.8e-16   3.9e-12   45.9   0.0     2   110   209   310   208   312 0.92 Peptidase dimerisation domain
Peptidase_M42        PF05343.9    292 sp|P55179|PEPT_BACSU -            410   4.7e-06   25.5   0.0   2   3   7.4e-07    0.0037   16.0   0.0   134   196   142   206   126   247 0.85 M42 glutamyl aminopeptidase
Peptidase_M20        PF01546.23   189 sp|O34944|PEPVL_BACSU -            463   9.2e-28   97.0   0.0   1   1   2.1e-31   1.6e-27   96.2   0.0     4   188    84   459    81   460 0.88 Peptidase family M20/M25/M40
M20_dimer            PF07687.9    112 sp|O34944|PEPVL_BACSU -            463     0.031   14.0   0.0   2   2   5.6e-05      0.42   10.3   0.0    11    65   260   333   255   365 0.87 Peptidase dimerisation domain
FUR                  PF01475.14   120 sp|P71086|PERR_BACSU -            145   3.9e-41  139.7   0.0   1   1   2.1e-44   5.2e-41  139.3   0.0     1   120    15   133    15   133 0.99 Ferric uptake regulator family
HTH_20               PF12840.2     61 sp|P71086|PERR_BACSU -            145    0.0025   17.5   0.0   1   1     3e-06    0.0075   16.0   0.0    10    56    22    74    20    79 0.84 Helix-turn-helix domain
Cytochrom_C550       PF14495.1    136 sp|P71086|PERR_BACSU -            145     0.012   15.0   0.0   1   1   9.3e-06     0.023   14.1   0.0    62   113    20    72     4    77 0.86 Cytochrome c-550 domain
HTH_5                PF01022.15    47 sp|P71086|PERR_BACSU -            145      0.11   12.1   0.4   1   1   0.00017      0.43   10.2   0.0    26    46    53    73    21    74 0.71 Bacterial regulatory protein, arsR family
PFK                  PF00365.15   282 sp|O34529|PFKA_BACSU -            319  6.8e-129  428.8   4.4   1   1  5.5e-133  8.1e-129  428.5   4.4     1   282     2   277     2   277 0.99 Phosphofructokinase
PGM_PMM_I            PF02878.11   138 sp|P18159|PGCA_BACSU -            581   5.7e-44  148.9   0.1   1   1   6.9e-47   1.7e-43  147.4   0.1     2   136    42   182    41   184 0.97 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I
PGM_PMM_II           PF02879.11   104 sp|P18159|PGCA_BACSU -            581   4.7e-23   81.5   0.0   1   1   5.1e-26   1.3e-22   80.1   0.0     3   101   211   315   209   318 0.94 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II
PGM_PMM_III          PF02880.11   113 sp|P18159|PGCA_BACSU -            581     1e-22   80.3   0.0   1   1   8.4e-26   2.1e-22   79.3   0.0     1   113   324   451   324   451 0.88 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III
PGM_PMM_IV           PF00408.15    73 sp|P18159|PGCA_BACSU -            581   1.2e-11   44.4   0.0   1   1   1.5e-14   3.7e-11   42.8   0.0    22    68   502   563   469   569 0.79 Phosphoglucomutase/phosphomannomutase, C-terminal domain
DUF2887              PF11103.3    200 sp|P18159|PGCA_BACSU -            581      0.05   13.2   0.0   1   1   4.7e-05      0.12   12.0   0.0    78   139    70   132    62   137 0.89 Protein of unknown function (DUF2887)
NLPC_P60             PF00877.14   105 sp|P96740|PGDS_BACSU -            413   1.5e-80  265.8   2.1   1   3   4.6e-26   8.6e-23   80.1   0.1     1   105    48   157    48   157 0.91 NlpC/P60 family
NLPC_P60             PF00877.14   105 sp|P96740|PGDS_BACSU -            413   1.5e-80  265.8   2.1   2   3   1.7e-34   3.1e-31  107.3   0.0     1   105   178   285   178   285 0.98 NlpC/P60 family
NLPC_P60             PF00877.14   105 sp|P96740|PGDS_BACSU -            413   1.5e-80  265.8   2.1   3   3   3.9e-25   7.3e-22   77.1   0.0     2   104   308   410   306   411 0.93 NlpC/P60 family
DUF830               PF05708.7    158 sp|P96740|PGDS_BACSU -            413   4.6e-14   52.6   0.0   2   4   3.8e-09   7.1e-06   26.0   0.0     2   147    98   228    97   236 0.80 Orthopoxvirus protein of unknown function (DUF830)
DUF830               PF05708.7    158 sp|P96740|PGDS_BACSU -            413   4.6e-14   52.6   0.0   3   4   6.1e-07    0.0011   18.9   0.0    26   132   243   346   228   364 0.86 Orthopoxvirus protein of unknown function (DUF830)
LRAT                 PF04970.8    126 sp|P96740|PGDS_BACSU -            413   3.3e-10   39.9   0.3   2   4   3.9e-05     0.072   13.0   0.0     6    46    96   141    92   181 0.82 Lecithin retinol acyltransferase
LRAT                 PF04970.8    126 sp|P96740|PGDS_BACSU -            413   3.3e-10   39.9   0.3   4   4   0.00012      0.23   11.4   0.0     6    46   356   395   352   412 0.69 Lecithin retinol acyltransferase
End_beta_barrel      PF12195.3     83 sp|P96740|PGDS_BACSU -            413   7.3e-05   22.4   0.1   2   3   0.00017      0.32   10.7   0.0    13    45   213   246   203   252 0.83 Beta barrel domain of bacteriophage endosialidase
Amidase_5            PF05382.8    145 sp|P96740|PGDS_BACSU -            413     0.011   15.3   1.5   1   3   0.00011      0.21   11.2   0.0    72   130    94   151    71   164 0.83 Bacteriophage peptidoglycan hydrolase
PGK                  PF00162.14   384 sp|P40924|PGK_BACSU  -            394  2.2e-164  546.5   1.3   1   1  3.3e-168  2.5e-164  546.4   1.3     1   384     5   383     5   383 0.99 Phosphoglycerate kinase
HAD_2                PF13419.1    176 sp|O06995|PGMB_BACSU -            226   3.1e-21   76.3   0.0   1   1   1.3e-24     4e-21   76.0   0.0     1   175     4   187     4   188 0.87 Haloacid dehalogenase-like hydrolase
Hydrolase            PF00702.21   215 sp|O06995|PGMB_BACSU -            226     3e-12   47.4   0.2   1   1   1.8e-14   5.4e-11   43.3   0.2     1   215     1   182     1   182 0.79 haloacid dehalogenase-like hydrolase
Hydrolase_like       PF13242.1     75 sp|O06995|PGMB_BACSU -            226     2e-06   27.4   0.2   1   1   1.4e-09   4.1e-06   26.4   0.2     3    52   144   192   142   207 0.91 HAD-hyrolase-like
BING4CT              PF08149.6     80 sp|O06995|PGMB_BACSU -            226     0.046   13.2   0.0   1   1   2.6e-05     0.078   12.4   0.0    23    74    42    90    20    93 0.87 BING4CT (NUC141) domain
CDP-OH_P_transf      PF01066.16   101 sp|P46322|PGSA_BACSU -            193   2.1e-17   63.2   3.4   1   2   1.4e-21   2.1e-17   63.2   3.4     3    97     3   120     1   124 0.82 CDP-alcohol phosphatidyltransferase
SIS                  PF01380.17   131 sp|P42404|PHI_BACSU  -            185   4.2e-21   74.9   0.1   2   2   2.4e-24   8.8e-21   73.8   0.1     3   129    34   155    32   157 0.96 SIS domain
SIS_2                PF13580.1    138 sp|P42404|PHI_BACSU  -            185   4.1e-09   36.2   2.8   1   2     6e-07    0.0022   17.7   0.5     5    60     6    61     4    74 0.82 SIS domain
SIS_2                PF13580.1    138 sp|P42404|PHI_BACSU  -            185   4.1e-09   36.2   2.8   2   2   1.8e-07   0.00065   19.4   0.2    95   137    71   112    59   112 0.84 SIS domain
Transglut_core       PF01841.14   113 sp|P42404|PHI_BACSU  -            185       0.1   12.8   0.0   1   1   3.4e-05      0.13   12.5   0.0    15    87     4    80     1   117 0.71 Transglutaminase-like superfamily
L6_membrane          PF05805.7    195 sp|P42404|PHI_BACSU  -            185      0.12   11.9   0.0   1   1   4.7e-05      0.17   11.3   0.0    23    71    14    62     5    69 0.85 L6 membrane protein
His_Phos_1           PF00300.17   158 sp|O07617|PHOE_BACSU -            193   9.4e-36  123.2   0.0   1   1   8.7e-40   1.3e-35  122.8   0.0     2   158     4   146     3   146 0.96 Histidine phosphatase superfamily (branch 1)
PhoH                 PF02562.11   205 sp|P46343|PHOL_BACSU -            319   3.1e-96  320.4   0.0   1   1   2.8e-99   4.2e-96  320.0   0.0     2   205   113   316   112   316 0.99 PhoH-like protein
AAA_30               PF13604.1    196 sp|P46343|PHOL_BACSU -            319   6.2e-07   29.1   0.2   1   1   3.2e-09   4.7e-06   26.3   0.2     5   133   119   269   116   300 0.71 AAA domain
UvrD-helicase        PF00580.16   315 sp|P46343|PHOL_BACSU -            319   0.00029   20.2   1.4   2   2   0.00015      0.22   10.8   0.1   259   294   233   268   229   269 0.89 UvrD/REP helicase N-terminal domain
AAA_19               PF13245.1     76 sp|P46343|PHOL_BACSU -            319   0.00069   19.3   0.1   1   1   8.8e-07    0.0013   18.4   0.1     7    47   127   165   122   179 0.68 Part of AAA domain
IstB_IS21            PF01695.12   178 sp|P46343|PHOL_BACSU -            319   0.00072   19.0   0.0   1   1     8e-07    0.0012   18.3   0.0    31    76   111   159    80   168 0.72 IstB-like ATP binding protein
DEAD                 PF00270.24   169 sp|P46343|PHOL_BACSU -            319     0.012   15.1   0.0   1   2   3.9e-05     0.057   12.9   0.0     3    53   119   169   117   193 0.85 DEAD/DEAH box helicase
AAA_25               PF13481.1    194 sp|P46343|PHOL_BACSU -            319     0.014   14.8   0.2   2   2   0.00062      0.92    8.8   0.1    32    61   129   158   119   187 0.82 AAA domain
AAA_22               PF13401.1    131 sp|P46343|PHOL_BACSU -            319     0.019   15.1   0.3   1   1   8.4e-05      0.12   12.4   0.3     9   108   135   250   127   269 0.57 AAA domain
UPF0552              PF10574.4    224 sp|P46343|PHOL_BACSU -            319      0.08   12.3   0.1   2   2   0.00031      0.46    9.9   0.0   129   173    84   128    59   133 0.83 Uncharacterised protein family UPF0552
PhrC_PhrF            PF11131.3     37 sp|P94416|PHRC_BACSU -             40   2.9e-22   77.9   1.5   1   1   2.2e-26   3.2e-22   77.7   1.5     1    37     3    40     3    40 0.99 Rap-phr extracellular signalling
PhrC_PhrF            PF11131.3     37 sp|P71001|PHRF_BACSU -             39   1.8e-24   85.0   0.2   1   1   1.3e-28   1.9e-24   84.9   0.2     1    37     3    39     3    39 0.99 Rap-phr extracellular signalling
CHAT                 PF12770.2    287 sp|O32295|PHRG_BACSU -             38       0.1   11.7   0.0   1   1   7.1e-06      0.11   11.6   0.0   215   238     2    25     1    30 0.91 CHAT domain
Class_IIIsignal      PF04021.7     28 sp|O31492|PHRI_BACSU -             39     0.025   14.3   1.3   1   1   2.1e-06     0.031   14.0   1.3    11    27     6    22     6    23 0.95 Class III signal peptide
SMP_2                PF10144.4    210 sp|O31840|PHRK_BACSU -             40     0.078   12.0   0.0   1   1   5.7e-06     0.085   11.9   0.0    17    47     5    35     2    37 0.92 Bacterial virulence factor haemolysin
Phosphorylase        PF00343.15   713 sp|P39123|PHSG_BACSU -            798         0 1132.8   0.5   1   1         0         0 1132.5   0.5     2   713    93   796    92   796 0.99 Carbohydrate phosphorylase
DUF3564              PF12087.3    122 sp|P39123|PHSG_BACSU -            798      0.02   14.4   0.0   1   1   8.5e-06     0.063   12.8   0.0    22    66   163   207   158   214 0.84 Protein of unknown function (DUF3564)
PHO4                 PF01384.15   326 sp|O34436|PIT_BACSU  -            333  1.1e-100  336.4  34.9   1   1  2.6e-104  1.3e-100  336.2  34.9     1   325    22   321    22   322 0.95 Phosphate transporter family
Pkinase              PF00069.20   260 sp|P37562|PKN1_BACSU -            338   1.5e-12   47.2   0.0   1   1     7e-16   2.1e-12   46.7   0.0     1   212    28   231    28   284 0.77 Protein kinase domain
APH                  PF01636.18   239 sp|P37562|PKN1_BACSU -            338     7e-06   25.9   0.0   1   2   3.2e-05     0.096   12.4   0.0     3    91    32   125    31   142 0.79 Phosphotransferase enzyme family
APH                  PF01636.18   239 sp|P37562|PKN1_BACSU -            338     7e-06   25.9   0.0   2   2   3.8e-05      0.11   12.1   0.0   164   195   140   171   130   176 0.79 Phosphotransferase enzyme family
Pkinase_Tyr          PF07714.12   259 sp|P37562|PKN1_BACSU -            338    0.0032   16.5   0.0   1   1   1.8e-06    0.0055   15.8   0.0     3   138    30   158    28   182 0.75 Protein tyrosine kinase
WaaY                 PF06176.6    229 sp|P37562|PKN1_BACSU -            338     0.089   11.9   0.0   1   1   5.5e-05      0.16   11.1   0.0   110   182    99   172    40   184 0.75 Lipopolysaccharide core biosynthesis protein (WaaY)
Lactamase_B          PF00753.22   194 sp|O34769|PKSB_BACSU -            225   1.7e-21   76.7   0.0   1   1   4.6e-25   2.3e-21   76.3   0.0     3   194    16   181    14   181 0.79 Metallo-beta-lactamase superfamily
Lactamase_B_2        PF12706.2    194 sp|O34769|PKSB_BACSU -            225     2e-08   34.0   0.1   1   1   5.2e-12   2.6e-08   33.6   0.1     2   142    32   161    31   193 0.76 Beta-lactamase superfamily domain
Lactamase_B_3        PF13483.1    163 sp|O34769|PKSB_BACSU -            225    0.0039   16.9   0.0   1   1     1e-06    0.0052   16.5   0.0     9    86    21   104    17   171 0.68 Beta-lactamase superfamily domain
Acyl_transf_1        PF00698.16   318 sp|O34825|PKSC_BACSU -            288   8.6e-39  133.7   0.0   1   1   1.3e-42   9.5e-39  133.5   0.0     1   282     3   282     3   288 0.86 Acyl transferase domain
DUF2974              PF11187.3    224 sp|O34825|PKSC_BACSU -            288     0.073   12.4   0.0   1   1   1.7e-05      0.13   11.6   0.0    60   104    55    99    50   138 0.88 Protein of unknown function (DUF2974)
Acyl_transf_1        PF00698.16   318 sp|O34787|PKSE_BACSU -            767   6.1e-34  117.7   0.0   1   1   4.2e-37   1.2e-33  116.7   0.0     1   299     3   297     3   313 0.85 Acyl transferase domain
NMO                  PF03060.10   330 sp|O34787|PKSE_BACSU -            767   2.8e-14   53.0   2.0   1   1   1.1e-16   3.2e-13   49.5   2.0    17   249   334   592   319   612 0.71 Nitronate monooxygenase
Glu_synthase         PF01645.12   368 sp|O34787|PKSE_BACSU -            767    0.0022   16.9   0.1   1   1   1.6e-06    0.0046   15.9   0.1   262   305   521   564   489   573 0.85 Conserved region in glutamate synthase
IMPDH                PF00478.20   352 sp|O34787|PKSE_BACSU -            767     0.045   12.6   1.1   1   1   2.4e-05     0.071   11.9   0.3   206   252   528   574   508   585 0.83 IMP dehydrogenase / GMP reductase domain
PcrB                 PF01884.12   231 sp|O34787|PKSE_BACSU -            767     0.077   12.2   0.0   1   1   5.8e-05      0.17   11.0   0.0   170   213   521   564   514   584 0.78 PcrB family
ketoacyl-synt        PF00109.21   254 sp|P40804|PKSF_BACSU -            415   3.6e-40  138.0   0.3   1   2   6.4e-42   3.2e-38  131.6   0.7     3   254     8   249     6   249 0.89 Beta-ketoacyl synthase, N-terminal domain
Ketoacyl-synt_C      PF02801.17   119 sp|P40804|PKSF_BACSU -            415     8e-28   96.6   0.1   1   1   3.5e-31   1.7e-27   95.5   0.0     1   119   257   367   257   367 0.96 Beta-ketoacyl synthase, C-terminal domain
Thiolase_N           PF00108.18   264 sp|P40804|PKSF_BACSU -            415    0.0066   15.4   0.0   1   2   4.9e-06     0.024   13.6   0.0    81   141   157   216   149   230 0.88 Thiolase, N-terminal domain
HMG_CoA_synt_C       PF08540.5    282 sp|P40830|PKSG_BACSU -            420   7.4e-15   55.1   0.1   1   2   1.7e-05      0.05   13.0   0.2    31    90   212   264   185   279 0.80 Hydroxymethylglutaryl-coenzyme A synthase C terminal
HMG_CoA_synt_C       PF08540.5    282 sp|P40830|PKSG_BACSU -            420   7.4e-15   55.1   0.1   2   2   6.6e-14     2e-10   40.6   0.0   127   241   267   372   262   417 0.75 Hydroxymethylglutaryl-coenzyme A synthase C terminal
HMG_CoA_synt_N       PF01154.12   174 sp|P40830|PKSG_BACSU -            420     2e-11   43.7   0.0   1   1   1.5e-14   4.3e-11   42.6   0.0     5   172     4   180     2   182 0.85 Hydroxymethylglutaryl-coenzyme A synthase N terminal
Chal_sti_synt_N      PF00195.14   227 sp|P40830|PKSG_BACSU -            420   2.4e-07   30.2   0.0   1   1   1.2e-10   3.6e-07   29.6   0.0   102   227    52   181    20   181 0.83 Chalcone and stilbene synthases, N-terminal domain
ACP_syn_III          PF08545.5     80 sp|P40830|PKSG_BACSU -            420   0.00022   20.8   0.2   1   1     2e-07   0.00058   19.4   0.2     1    64   108   180   108   192 0.76 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III
ACP_syn_III_C        PF08541.5     90 sp|P40830|PKSG_BACSU -            420     0.013   15.5   0.0   1   1   9.3e-06     0.028   14.4   0.0    40    81   289   330   260   333 0.90 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal
ECH                  PF00378.15   245 sp|P40805|PKSH_BACSU -            259   4.4e-69  232.3   0.0   1   1   3.4e-73     5e-69  232.1   0.0     2   244    11   250    10   251 0.98 Enoyl-CoA hydratase/isomerase family
ECH                  PF00378.15   245 sp|P40802|PKSI_BACSU -            249   1.7e-72  243.4   0.0   1   1   1.3e-76   1.9e-72  243.3   0.0     2   243     9   247     8   249 0.99 Enoyl-CoA hydratase/isomerase family
ketoacyl-synt        PF00109.21   254 sp|P40806|PKSJ_BACSU -           5043  1.2e-218  722.8   0.0   1   3   1.7e-66   1.6e-63  214.5   0.0     2   254  1761  2010  1760  2010 0.93 Beta-ketoacyl synthase, N-terminal domain
ketoacyl-synt        PF00109.21   254 sp|P40806|PKSJ_BACSU -           5043  1.2e-218  722.8   0.0   2   3   1.3e-91   1.2e-88  296.8   0.0     2   254  3340  3589  3339  3589 0.97 Beta-ketoacyl synthase, N-terminal domain
ketoacyl-synt        PF00109.21   254 sp|P40806|PKSJ_BACSU -           5043  1.2e-218  722.8   0.0   3   3   2.5e-64   2.3e-61  207.5   0.0     2   254  4589  4821  4588  4821 0.94 Beta-ketoacyl synthase, N-terminal domain
AMP-binding          PF00501.23   417 sp|P40806|PKSJ_BACSU -           5043  4.7e-179  595.1   0.0   1   2   1.7e-68   1.5e-65  221.2   0.0    17   416    55   456    37   457 0.82 AMP-binding enzyme
AMP-binding          PF00501.23   417 sp|P40806|PKSJ_BACSU -           5043  4.7e-179  595.1   0.0   2   2  3.5e-114  3.3e-111  371.6   0.1     1   417  1160  1554  1160  1554 0.87 AMP-binding enzyme
Ketoacyl-synt_C      PF02801.17   119 sp|P40806|PKSJ_BACSU -           5043  3.9e-116  381.6   0.4   1   3   8.8e-42   8.1e-39  132.1   0.1     1   118  2018  2136  2018  2137 0.99 Beta-ketoacyl synthase, C-terminal domain
Ketoacyl-synt_C      PF02801.17   119 sp|P40806|PKSJ_BACSU -           5043  3.9e-116  381.6   0.4   2   3     7e-45   6.5e-42  142.1   0.1     1   119  3597  3724  3597  3724 0.98 Beta-ketoacyl synthase, C-terminal domain
Ketoacyl-synt_C      PF02801.17   119 sp|P40806|PKSJ_BACSU -           5043  3.9e-116  381.6   0.4   3   3   6.4e-33   5.9e-30  103.5   0.0     1   117  4829  4943  4829  4945 0.97 Beta-ketoacyl synthase, C-terminal domain
KR                   PF08659.5    181 sp|P40806|PKSJ_BACSU -           5043  1.5e-107  357.1   0.0   1   2   2.7e-64   2.5e-61  206.4   0.0     1   180  2850  3035  2850  3036 0.98 KR domain
KR                   PF08659.5    181 sp|P40806|PKSJ_BACSU -           5043  1.5e-107  357.1   0.0   2   2   2.5e-46   2.3e-43  147.9   0.0     3   180  4174  4369  4173  4370 0.90 KR domain
adh_short            PF00106.20   167 sp|P40806|PKSJ_BACSU -           5043   2.1e-84  281.5   0.1   1   2   3.8e-49   3.6e-46  157.1   0.0     1   164  2850  3014  2850  3017 0.96 short chain dehydrogenase
adh_short            PF00106.20   167 sp|P40806|PKSJ_BACSU -           5043   2.1e-84  281.5   0.1   2   2   2.8e-38   2.6e-35  121.8   0.0     2   164  4173  4355  4172  4357 0.92 short chain dehydrogenase
Condensation         PF00668.15   301 sp|P40806|PKSJ_BACSU -           5043   1.6e-75  253.7   0.1   1   1   3.5e-78   3.3e-75  252.7   0.1     3   300   692   988   690   989 0.97 Condensation domain
PP-binding           PF00550.20    67 sp|P40806|PKSJ_BACSU -           5043   8.9e-73  240.5   5.4   1   5   4.4e-13   4.1e-10   39.7   0.0     3    67   599   663   597   663 0.95 Phosphopantetheine attachment site
PP-binding           PF00550.20    67 sp|P40806|PKSJ_BACSU -           5043   8.9e-73  240.5   5.4   2   5   1.3e-18   1.2e-15   57.5   0.1     3    67  1663  1725  1661  1725 0.95 Phosphopantetheine attachment site
PP-binding           PF00550.20    67 sp|P40806|PKSJ_BACSU -           5043   8.9e-73  240.5   5.4   3   5   3.4e-17   3.1e-14   52.9   0.1     2    67  3119  3184  3118  3184 0.97 Phosphopantetheine attachment site
PP-binding           PF00550.20    67 sp|P40806|PKSJ_BACSU -           5043   8.9e-73  240.5   5.4   4   5   2.3e-16   2.1e-13   50.2   0.1     3    67  3218  3282  3216  3282 0.96 Phosphopantetheine attachment site
PP-binding           PF00550.20    67 sp|P40806|PKSJ_BACSU -           5043   8.9e-73  240.5   5.4   5   5   1.3e-12   1.2e-09   38.2   0.1     2    67  4467  4532  4466  4532 0.94 Phosphopantetheine attachment site
PS-DH                PF14765.1    296 sp|P40806|PKSJ_BACSU -           5043   1.1e-66  225.0   0.0   1   1   1.9e-69   1.7e-66  224.3   0.0     1   292  2374  2658  2374  2662 0.94 Polyketide synthase dehydratase
HxxPF_rpt            PF13745.1     91 sp|P40806|PKSJ_BACSU -           5043   5.1e-18   65.1   1.0   1   2   1.4e-18   1.3e-15   57.4   0.1     1    91  1010  1107  1010  1107 0.89 HxxPF-repeated domain
AMP-binding_C        PF13193.1     73 sp|P40806|PKSJ_BACSU -           5043   1.1e-17   64.7   0.1   2   2   4.6e-17   4.2e-14   53.2   0.0     2    73  1563  1633  1562  1633 0.94 AMP-binding enzyme C-terminal domain
Thiolase_N           PF00108.18   264 sp|P40806|PKSJ_BACSU -           5043   7.7e-12   44.7   0.6   2   3   8.9e-07   0.00083   18.4   0.1    80   131  3503  3554  3496  3572 0.81 Thiolase, N-terminal domain
Thiolase_N           PF00108.18   264 sp|P40806|PKSJ_BACSU -           5043   7.7e-12   44.7   0.6   3   3   3.2e-06    0.0029   16.6   0.0    78   125  4733  4781  4717  4808 0.79 Thiolase, N-terminal domain
AMP-binding_C_2      PF14535.1     96 sp|P40806|PKSJ_BACSU -           5043     1e-05   25.4   0.8   1   1   6.6e-08   6.1e-05   22.9   0.1     1    91   458   551   458   553 0.87 AMP-binding enzyme C-terminal domain
AATase               PF07247.7    480 sp|P40806|PKSJ_BACSU -           5043   0.00018   20.2   0.3   1   1   3.4e-06    0.0032   16.0   0.3   114   173   790   847   773   961 0.67 Alcohol acetyltransferase
Polysacc_synt_2      PF02719.10   294 sp|P40806|PKSJ_BACSU -           5043     0.052   12.4   0.0   1   2    0.0004      0.37    9.6   0.0     2    78  2853  2926  2852  2985 0.74 Polysaccharide biosynthesis protein
ketoacyl-synt        PF00109.21   254 sp|O31782|PKSN_BACSU -           5488  3.5e-236  780.2   0.0   1   3   1.3e-61   9.3e-59  198.9   0.0     2   253  1090  1338  1089  1339 0.93 Beta-ketoacyl synthase, N-terminal domain
ketoacyl-synt        PF00109.21   254 sp|O31782|PKSN_BACSU -           5488  3.5e-236  780.2   0.0   2   3     4e-91   2.8e-88  295.6   0.0     2   254  2577  2825  2576  2825 0.97 Beta-ketoacyl synthase, N-terminal domain
ketoacyl-synt        PF00109.21   254 sp|O31782|PKSN_BACSU -           5488  3.5e-236  780.2   0.0   3   3   8.1e-87   5.7e-84  281.5   0.0     2   254  4077  4323  4076  4323 0.96 Beta-ketoacyl synthase, N-terminal domain
PS-DH                PF14765.1    296 sp|O31782|PKSN_BACSU -           5488  9.5e-181  599.4   0.1   1   3   6.9e-51   4.8e-48  163.8   0.0     1   294  1700  1991  1700  1993 0.92 Polyketide synthase dehydratase
PS-DH                PF14765.1    296 sp|O31782|PKSN_BACSU -           5488  9.5e-181  599.4   0.1   2   3   1.3e-63   9.2e-61  205.5   0.1     1   292  3207  3489  3207  3493 0.93 Polyketide synthase dehydratase
PS-DH                PF14765.1    296 sp|O31782|PKSN_BACSU -           5488  9.5e-181  599.4   0.1   3   3   4.9e-70   3.4e-67  226.6   0.0     1   292  4706  4985  4706  4989 0.93 Polyketide synthase dehydratase
KR                   PF08659.5    181 sp|O31782|PKSN_BACSU -           5488  1.8e-160  529.5   4.6   1   3     5e-58   3.5e-55  186.4   0.0     1   181  2179  2365  2179  2365 0.97 KR domain
KR                   PF08659.5    181 sp|O31782|PKSN_BACSU -           5488  1.8e-160  529.5   4.6   2   3   5.5e-62   3.9e-59  199.3   0.5     1   180  3680  3865  3680  3866 0.98 KR domain
KR                   PF08659.5    181 sp|O31782|PKSN_BACSU -           5488  1.8e-160  529.5   4.6   3   3   1.1e-44   7.9e-42  142.9   0.1     1   179  5219  5397  5219  5399 0.96 KR domain
adh_short            PF00106.20   167 sp|O31782|PKSN_BACSU -           5488  7.3e-122  403.3   9.7   1   3     1e-43   7.1e-41  139.9   0.0     1   164  2179  2343  2179  2345 0.98 short chain dehydrogenase
adh_short            PF00106.20   167 sp|O31782|PKSN_BACSU -           5488  7.3e-122  403.3   9.7   2   3   1.4e-45     1e-42  145.9   1.4     1   164  3680  3844  3680  3847 0.97 short chain dehydrogenase
adh_short            PF00106.20   167 sp|O31782|PKSN_BACSU -           5488  7.3e-122  403.3   9.7   3   3   9.8e-38   6.9e-35  120.4   0.1     1   163  5219  5381  5219  5384 0.96 short chain dehydrogenase
Ketoacyl-synt_C      PF02801.17   119 sp|O31782|PKSN_BACSU -           5488  4.7e-121  397.4  11.6   1   3   3.1e-42   2.2e-39  133.9   0.2     1   118  1347  1465  1347  1466 0.99 Beta-ketoacyl synthase, C-terminal domain
Ketoacyl-synt_C      PF02801.17   119 sp|O31782|PKSN_BACSU -           5488  4.7e-121  397.4  11.6   2   3   8.6e-43   6.1e-40  135.7   0.7     1   119  2833  2957  2833  2957 0.96 Beta-ketoacyl synthase, C-terminal domain
Ketoacyl-synt_C      PF02801.17   119 sp|O31782|PKSN_BACSU -           5488  4.7e-121  397.4  11.6   3   3   3.9e-42   2.8e-39  133.6   0.6     1   116  4331  4453  4331  4456 0.96 Beta-ketoacyl synthase, C-terminal domain
AMP-binding          PF00501.23   417 sp|O31782|PKSN_BACSU -           5488  7.9e-114  380.2   0.0   1   1    2e-116  1.4e-113  379.4   0.0     1   417   472   879   472   879 0.85 AMP-binding enzyme
Condensation         PF00668.15   301 sp|O31782|PKSN_BACSU -           5488   1.1e-68  231.3   0.1   1   1   4.4e-71   3.1e-68  229.8   0.1     4   298     6   298     3   300 0.95 Condensation domain
PP-binding           PF00550.20    67 sp|O31782|PKSN_BACSU -           5488   9.7e-46  153.8   0.0   1   3   3.8e-17   2.7e-14   53.1   0.0     1    67   990  1054   990  1054 0.96 Phosphopantetheine attachment site
PP-binding           PF00550.20    67 sp|O31782|PKSN_BACSU -           5488   9.7e-46  153.8   0.0   2   3   3.6e-14   2.5e-11   43.6   0.0     3    67  2457  2521  2455  2521 0.95 Phosphopantetheine attachment site
PP-binding           PF00550.20    67 sp|O31782|PKSN_BACSU -           5488   9.7e-46  153.8   0.0   3   3     5e-17   3.5e-14   52.7   0.0     2    67  3957  4022  3956  4022 0.97 Phosphopantetheine attachment site
HxxPF_rpt            PF13745.1     91 sp|O31782|PKSN_BACSU -           5488   1.7e-14   53.9   0.4   1   1   8.1e-17   5.7e-14   52.1   0.4     1    91   322   418   322   418 0.90 HxxPF-repeated domain
AMP-binding_C        PF13193.1     73 sp|O31782|PKSN_BACSU -           5488   7.9e-12   45.9   0.0   1   1   5.4e-14   3.8e-11   43.7   0.0     2    73   888   962   887   962 0.89 AMP-binding enzyme C-terminal domain
Thiolase_N           PF00108.18   264 sp|O31782|PKSN_BACSU -           5488   3.1e-11   42.7   2.1   2   3   2.4e-06    0.0017   17.4   0.0    80   119  2739  2778  2734  2811 0.76 Thiolase, N-terminal domain
Thiolase_N           PF00108.18   264 sp|O31782|PKSN_BACSU -           5488   3.1e-11   42.7   2.1   3   3     2e-06    0.0014   17.6   0.1    80   119  4237  4276  4230  4304 0.84 Thiolase, N-terminal domain
Epimerase            PF01370.16   236 sp|O31782|PKSN_BACSU -           5488   1.1e-09   38.0   1.5   2   3   1.7e-05     0.012   15.0   0.2     2   123  3683  3823  3682  3858 0.74 NAD dependent epimerase/dehydratase family
Epimerase            PF01370.16   236 sp|O31782|PKSN_BACSU -           5488   1.1e-09   38.0   1.5   3   3   0.00013      0.09   12.1   0.0     2   123  5222  5360  5221  5372 0.83 NAD dependent epimerase/dehydratase family
Poty_PP              PF08440.5    274 sp|O31782|PKSN_BACSU -           5488     0.022   13.8   1.4   2   2   0.00079      0.56    9.2   0.0   136   183  3057  3104  3036  3114 0.85 Potyviridae polyprotein
DUF1307              PF06998.6    123 sp|O31782|PKSN_BACSU -           5488      0.75    9.8   3.2   1   1   0.00097      0.68    9.9   0.1    34    97  3734  3798  3727  3807 0.83 Protein of unknown function (DUF1307)
p450                 PF00067.17   463 sp|O31785|PKSS_BACSU -            405   1.4e-28   99.6   5.8   1   1   2.3e-28   1.7e-24   86.1   5.8    79   433    83   373    24   393 0.86 Cytochrome P450
CemA                 PF03040.9    230 sp|O31785|PKSS_BACSU -            405      0.11   12.1   0.9   1   2   2.7e-05       0.2   11.2   0.4    32   140    62   173    45   178 0.79 CemA family
Abhydrolase_6        PF12697.2    228 sp|O34705|PLBAC_BACSU -            259   9.5e-26   91.0   0.0   1   1   1.4e-28   1.2e-25   90.6   0.0     1   221    13   243    13   250 0.76 Alpha/beta hydrolase family
Abhydrolase_5        PF12695.2    145 sp|O34705|PLBAC_BACSU -            259     4e-21   75.2   0.0   1   1   9.9e-24   8.6e-21   74.2   0.0     1   144    12   236    12   237 0.86 Alpha/beta hydrolase family
Hydrolase_4          PF12146.3     79 sp|O34705|PLBAC_BACSU -            259     4e-16   58.6   0.2   1   1   1.2e-18     1e-15   57.3   0.2     8    78     3    72     1    73 0.94 Putative lysophospholipase
Abhydrolase_1        PF00561.15   230 sp|O34705|PLBAC_BACSU -            259   9.2e-09   35.1   0.0   1   1   2.7e-10   2.3e-07   30.6   0.0     1    92    38   153    38   223 0.78 alpha/beta hydrolase fold
PGAP1                PF07819.8    225 sp|O34705|PLBAC_BACSU -            259   3.2e-05   23.6   0.0   1   1   5.9e-08   5.1e-05   22.9   0.0    75   133    70   125    45   136 0.75 PGAP1-like protein
Abhydrolase_2        PF02230.11   216 sp|O34705|PLBAC_BACSU -            259   0.00044   19.7   0.0   1   1   1.3e-06    0.0011   18.4   0.0    82   151    56   127    44   172 0.84 Phospholipase/Carboxylesterase
Ser_hydrolase        PF06821.8    171 sp|O34705|PLBAC_BACSU -            259   0.00081   19.0   0.0   1   1   2.4e-06    0.0021   17.7   0.0    42    91    64   116    51   166 0.80 Serine hydrolase
Abhydrolase_3        PF07859.8    211 sp|O34705|PLBAC_BACSU -            259    0.0012   18.4   0.0   1   1     2e-05     0.017   14.6   0.0    68   208    76   237    57   240 0.47 alpha/beta hydrolase fold
Thioesterase         PF00975.15   229 sp|O34705|PLBAC_BACSU -            259    0.0018   18.5   0.0   1   1   2.1e-06    0.0018   18.5   0.0    44   101    57   113    12   219 0.75 Thioesterase domain
LCAT                 PF02450.10   389 sp|O34705|PLBAC_BACSU -            259    0.0041   16.1   0.0   1   1   6.7e-06    0.0058   15.6   0.0   108   162    70   117    57   160 0.74 Lecithin:cholesterol acyltransferase
Peptidase_S9         PF00326.16   213 sp|O34705|PLBAC_BACSU -            259    0.0043   16.3   0.0   1   2   8.7e-05     0.076   12.2   0.0     3    99    26   116    24   127 0.84 Prolyl oligopeptidase family
DUF1350              PF07082.6    250 sp|O34705|PLBAC_BACSU -            259    0.0051   15.9   0.0   1   1   8.6e-06    0.0075   15.3   0.0     9   101     2    91     1   110 0.84 Protein of unknown function (DUF1350)
DUF2305              PF10230.4    266 sp|O34705|PLBAC_BACSU -            259      0.02   14.3   0.0   1   1   3.7e-05     0.032   13.6   0.0    56   120    56   114    31   128 0.78 Uncharacterised conserved protein (DUF2305)
Chlorophyllase2      PF12740.2    260 sp|O34705|PLBAC_BACSU -            259     0.024   13.5   0.1   1   1   0.00011     0.099   11.5   0.1    17   165    10   147     3   163 0.71 Chlorophyllase enzyme
Esterase             PF00756.15   251 sp|O34705|PLBAC_BACSU -            259       0.1   11.9   0.0   1   1   0.00028      0.24   10.7   0.0    97   130    64    95    44   112 0.85 Putative esterase
Lipase_3             PF01764.20   141 sp|O34705|PLBAC_BACSU -            259      0.14   11.7   0.0   1   1   0.00028      0.25   10.9   0.0    49   104    63   114    29   131 0.76 Lipase (class 3)
DUF676               PF05057.9    219 sp|O34705|PLBAC_BACSU -            259      0.15   11.3   0.0   1   1   0.00026      0.22   10.7   0.0    78   142    79   131    45   172 0.73 Putative serine esterase (DUF676)
Acyltransferase      PF01553.16   132 sp|O07584|PLSC_BACSU -            199   1.4e-24   86.0   0.0   1   1   2.5e-28   1.9e-24   85.6   0.0     2   131    19   141    18   142 0.95 Acyltransferase
MbeB_N               PF04837.7     52 sp|O07584|PLSC_BACSU -            199     0.074   13.1   0.1   1   1   1.8e-05      0.13   12.3   0.1    15    39   174   198   168   199 0.94 MbeB-like, N-term conserved region
FA_synthesis         PF02504.10   323 sp|P71018|PLSX_BACSU -            333  3.6e-135  449.9   5.6   1   1  2.8e-139  4.1e-135  449.7   5.6     1   321     1   319     1   321 0.99 Fatty acid synthesis protein
G3P_acyltransf       PF02660.10   178 sp|Q45064|PLSY_BACSU -            193   3.1e-57  192.9  20.0   1   1   2.4e-61   3.6e-57  192.8  20.0     1   178     8   183     8   183 0.95 Glycerol-3-phosphate acyltransferase
Pectate_lyase        PF03211.8    215 sp|O34310|PLYC_BACSU -            221   2.5e-76  255.8   8.8   1   1   5.9e-80   2.9e-76  255.6   8.8     3   215    18   220    14   220 0.96 Pectate lyase
Pectate_lyase_3      PF12708.2    225 sp|O34310|PLYC_BACSU -            221   1.1e-05   25.7   5.9   1   1   2.9e-09   1.4e-05   25.3   5.9    45   221    32   202    31   208 0.79 Pectate lyase superfamily protein
Beta_helix           PF13229.1    158 sp|O34310|PLYC_BACSU -            221   0.00019   21.2   6.8   1   1   1.1e-07   0.00056   19.6   6.8     4   118    92   209    38   221 0.59 Right handed beta helix region
Pec_lyase_C          PF00544.14   201 sp|P39116|PLY_BACSU  -            420     8e-51  172.3   5.6   1   1   7.3e-55   1.1e-50  171.9   5.6     7   200   133   345    72   346 0.87 Pectate lyase
COesterase           PF00135.23   535 sp|P37967|PNBA_BACSU -            489  2.5e-138  462.1   0.0   1   1  1.2e-141    3e-138  461.8   0.0    24   514     4   462     1   483 0.90 Carboxylesterase family
Abhydrolase_3        PF07859.8    211 sp|P37967|PNBA_BACSU -            489   2.7e-13   50.0   0.3   1   1   3.1e-16   7.6e-13   48.5   0.3     1   110   100   218   100   265 0.75 alpha/beta hydrolase fold
Peptidase_S9         PF00326.16   213 sp|P37967|PNBA_BACSU -            489   2.3e-08   33.5   0.0   1   1   1.6e-11   3.9e-08   32.7   0.0    11   202   125   327   120   337 0.72 Prolyl oligopeptidase family
Abhydrolase_5        PF12695.2    145 sp|P37967|PNBA_BACSU -            489   4.9e-05   23.1   0.2   1   1     4e-08   9.9e-05   22.1   0.2     2   136   100   262    99   271 0.62 Alpha/beta hydrolase family
Esterase             PF00756.15   251 sp|P37967|PNBA_BACSU -            489     0.024   14.0   0.8   1   1   0.00016      0.38   10.1   0.8    10   149    85   217    80   266 0.74 Putative esterase
DUF2424              PF10340.4    374 sp|P37967|PNBA_BACSU -            489     0.087   11.4   0.9   1   1   0.00032      0.79    8.2   0.2   108   213    83   199    65   213 0.65 Protein of unknown function (DUF2424)
Isochorismatase      PF00857.15   174 sp|O32091|PNCA_BACSU -            183   4.4e-38  130.9   0.0   1   1   3.4e-42     5e-38  130.7   0.0     2   169     4   181     3   183 0.93 Isochorismatase family
NAPRTase             PF04095.11   245 sp|O32090|PNCB_BACSU -            490   1.6e-24   86.5   0.1   1   1   3.1e-28   2.3e-24   86.0   0.1     4   227   159   358   157   391 0.84 Nicotinate phosphoribosyltransferase (NAPRTase) family
QRPTase_N            PF02749.11    88 sp|O32090|PNCB_BACSU -            490      0.06   13.1   0.0   1   1   2.2e-05      0.16   11.7   0.0    43    85    85   137    50   139 0.72 Quinolinate phosphoribosyl transferase, N-terminal domain
RNase_PH             PF01138.16   132 sp|P50849|PNP_BACSU  -            705   5.5e-41  139.9   0.0   1   2   3.6e-23     6e-20   71.9   0.0     2   132    14   144    13   144 0.94 3' exoribonuclease family, domain 1
RNase_PH             PF01138.16   132 sp|P50849|PNP_BACSU  -            705   5.5e-41  139.9   0.0   2   2   3.4e-21   5.6e-18   65.5   0.0     1   132   324   457   324   457 0.91 3' exoribonuclease family, domain 1
RNase_PH_C           PF03725.10    68 sp|P50849|PNP_BACSU  -            705   4.7e-31  106.5   9.6   1   2   1.2e-22     2e-19   69.2   0.4     1    67   147   210   147   211 0.97 3' exoribonuclease family, domain 2
RNase_PH_C           PF03725.10    68 sp|P50849|PNP_BACSU  -            705   4.7e-31  106.5   9.6   2   2   4.4e-14   7.2e-11   41.8   0.4     1    68   460   530   460   530 0.93 3' exoribonuclease family, domain 2
PNPase               PF03726.9     83 sp|P50849|PNP_BACSU  -            705   1.8e-20   72.9   7.0   1   1   1.1e-23   1.8e-20   72.9   7.0     1    83   241   321   241   321 0.98 Polyribonucleotide nucleotidyltransferase, RNA binding domain
S1                   PF00575.18    74 sp|P50849|PNP_BACSU  -            705   2.3e-19   69.2   4.8   1   1   4.4e-22   7.3e-19   67.6   4.8     2    74   620   691   619   691 0.97 S1 RNA binding domain
KH_1                 PF00013.24    60 sp|P50849|PNP_BACSU  -            705   7.5e-12   44.7   5.1   1   2   4.6e-15   7.5e-12   44.7   5.1     2    60   557   613   556   613 0.92 KH domain
KH_3                 PF13014.1     43 sp|P50849|PNP_BACSU  -            705   3.5e-08   32.8   3.3   1   1   3.6e-11     6e-08   32.1   2.2     1    41   565   598   565   608 0.86 KH domain
SPATA25              PF15218.1    228 sp|P50849|PNP_BACSU  -            705     0.006   16.0   0.3   1   1     1e-05     0.017   14.5   0.1   143   173   434   465   422   478 0.79 Spermatogenesis-associated protein 25
KH_5                 PF13184.1     69 sp|P50849|PNP_BACSU  -            705     0.072   12.9   3.8   2   2   0.00021      0.34   10.7   0.4    16    44   563   590   554   594 0.87 NusA-like KH domain
HHH_8                PF14716.1     68 sp|P94544|POLX_BACSU -            570     2e-24   85.5   5.0   1   4   7.3e-21   1.5e-17   63.4   0.0     2    67     4    68     3    69 0.97 Helix-hairpin-helix domain
DNA_pol_B_thumb      PF14791.1     64 sp|P94544|POLX_BACSU -            570   8.7e-22   76.5   0.2   2   2     3e-24   6.3e-21   73.8   0.1     2    63   253   314   252   315 0.98 DNA polymerase beta thumb
PHP                  PF02811.14   175 sp|P94544|POLX_BACSU -            570     5e-15   55.7   2.4   2   2   5.7e-18   1.2e-14   54.4   0.5     2   169   337   504   336   517 0.81 PHP domain
HHH_5                PF14520.1     60 sp|P94544|POLX_BACSU -            570   1.4e-12   47.5   0.7   1   4   0.00012      0.25   11.5   0.0     2    40    45    87    44    90 0.85 Helix-hairpin-helix domain
HHH_5                PF14520.1     60 sp|P94544|POLX_BACSU -            570   1.4e-12   47.5   0.7   2   4   8.5e-10   1.8e-06   28.0   0.4     7    59    90   144    88   145 0.91 Helix-hairpin-helix domain
DNA_pol_B_palm       PF14792.1    112 sp|P94544|POLX_BACSU -            570     0.033   14.2   0.2   1   1   4.6e-05     0.097   12.7   0.0     9    57   160   208   152   238 0.81 DNA polymerase beta palm
DHHA2                PF02833.9    127 sp|P37487|PPAC_BACSU -            309   2.2e-40  137.7   3.8   1   1     1e-43   5.1e-40  136.5   3.8     2   127   182   307   181   307 0.99 DHHA2 domain
DHH                  PF01368.15   145 sp|P37487|PPAC_BACSU -            309   9.1e-33  112.9   1.4   1   2   2.1e-36     1e-32  112.7   0.2     6   145     2   147     1   147 0.97 DHH family
ASD2                 PF08687.6    264 sp|P37487|PPAC_BACSU -            309    0.0077   15.5   1.7   1   1     2e-06    0.0098   15.2   1.7    50   178   137   286    84   306 0.73 Apx/Shroom domain ASD2
HAD_2                PF13419.1    176 sp|Q9JMQ2|PPAX_BACSU -            216   1.5e-24   87.1   0.0   1   1   9.7e-28   1.8e-24   86.9   0.0     1   176     9   184     9   184 0.88 Haloacid dehalogenase-like hydrolase
Hydrolase            PF00702.21   215 sp|Q9JMQ2|PPAX_BACSU -            216   2.4e-18   67.3   0.4   1   1   4.4e-19   8.2e-16   59.0   0.4     1   215     6   178     6   178 0.82 haloacid dehalogenase-like hydrolase
Hydrolase_like       PF13242.1     75 sp|Q9JMQ2|PPAX_BACSU -            216   1.2e-14   53.7   0.0   1   1   1.1e-17   2.1e-14   52.9   0.0     3    75   140   209   138   209 0.94 HAD-hyrolase-like
HAD                  PF12710.2    192 sp|Q9JMQ2|PPAX_BACSU -            216     3e-09   37.3   0.1   1   1   2.1e-12   3.8e-09   36.9   0.1     1   190     9   173     9   175 0.66 haloacid dehalogenase-like hydrolase
NT5C                 PF06941.7    191 sp|Q9JMQ2|PPAX_BACSU -            216    0.0073   15.8   0.0   1   1   5.8e-06     0.011   15.2   0.0     4   100     8   112     5   121 0.73 5' nucleotidase, deoxy (Pyrimidine), cytosolic type C protein (NT5C)
Hydrolase_3          PF08282.7    254 sp|Q9JMQ2|PPAX_BACSU -            216     0.013   15.0   0.1   1   3   0.00018      0.33   10.4   0.0     1    25     9    33     9    41 0.85 haloacid dehalogenase-like hydrolase
Alk_phosphatase      PF00245.15   421 sp|P19405|PPB3_BACSU -            462  6.6e-153  509.3   9.9   1   1  1.6e-156  7.7e-153  509.1   9.9     1   420    43   454    43   455 0.99 Alkaline phosphatase
Metalloenzyme        PF01676.13   252 sp|P19405|PPB3_BACSU -            462   2.7e-07   30.2   7.4   2   2   9.1e-10   4.5e-06   26.2   3.8   125   217   252   431   245   456 0.75 Metalloenzyme superfamily
Sulfatase            PF00884.18   308 sp|P19405|PPB3_BACSU -            462    0.0078   15.4   1.4   1   1   7.6e-05      0.37    9.9   1.4     1   176    44   274    44   362 0.61 Sulfatase
Alk_phosphatase      PF00245.15   421 sp|P19406|PPB4_BACSU -            461  1.9e-151  504.5  10.1   1   1  7.5e-155  2.2e-151  504.3  10.1     1   420    49   458    49   459 0.99 Alkaline phosphatase
Metalloenzyme        PF01676.13   252 sp|P19406|PPB4_BACSU -            461     6e-08   32.3   9.0   2   2   3.7e-10   1.1e-06   28.2   1.6   124   237   258   456   248   460 0.92 Metalloenzyme superfamily
Phosphodiest         PF01663.17   365 sp|P19406|PPB4_BACSU -            461    0.0015   17.9   2.2   1   1     9e-07    0.0027   17.1   2.2   159   248   182   335    52   437 0.69 Type I phosphodiesterase / nucleotide pyrophosphatase
TIP_N                PF12457.3    109 sp|P19406|PPB4_BACSU -            461     0.013   15.6   0.2   1   1   2.7e-05      0.08   13.0   0.1    10    45   204   244   199   263 0.82 Tuftelin interacting protein N terminal
ATP-synt_E           PF05680.7     90 sp|P19406|PPB4_BACSU -            461      0.53   10.2   0.0   1   2   0.00018      0.53   10.2   0.0    16    42    21    47    12    52 0.85 ATP synthase E chain
PhoD                 PF09423.5    453 sp|P42251|PPBD_BACSU -            583  8.3e-165  548.7   2.7   1   1  6.6e-169  9.8e-165  548.5   2.7     2   453    68   512    67   512 0.93 PhoD-like phosphatase
Pro_isomerase        PF00160.16   155 sp|P35137|PPIB_BACSU -            143     3e-40  137.9   0.1   1   1   2.5e-44   3.7e-40  137.6   0.1    10   140    12   135     5   142 0.88 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD
Amino_oxidase        PF01593.19   450 sp|P32397|PPOX_BACSU -            470   1.6e-54  185.7   0.0   1   1   1.6e-57   1.8e-54  185.5   0.0     1   448    15   463    15   465 0.95 Flavin containing amine oxidoreductase
NAD_binding_8        PF13450.1     68 sp|P32397|PPOX_BACSU -            470   1.9e-10   40.6   0.0   1   1     6e-13   6.9e-10   38.8   0.0     1    59    10    72    10    81 0.83 NAD(P)-binding Rossmann-like domain
DAO                  PF01266.19   358 sp|P32397|PPOX_BACSU -            470   2.7e-08   33.1   0.0   1   2   1.4e-07   0.00016   20.6   0.0     1    71     7    81     7   105 0.77 FAD dependent oxidoreductase
DAO                  PF01266.19   358 sp|P32397|PPOX_BACSU -            470   2.7e-08   33.1   0.0   2   2   0.00015      0.18   10.7   0.0   163   205   249   291   212   449 0.80 FAD dependent oxidoreductase
NAD_binding_9        PF13454.1    156 sp|P32397|PPOX_BACSU -            470   1.3e-06   28.2   0.0   1   2   2.2e-05     0.025   14.3   0.0     1    41     9    49     9    69 0.85 FAD-NAD(P)-binding
NAD_binding_9        PF13454.1    156 sp|P32397|PPOX_BACSU -            470   1.3e-06   28.2   0.0   2   2   0.00014      0.16   11.7   0.0    87   154   215   286   173   288 0.69 FAD-NAD(P)-binding
Pyr_redox_3          PF13738.1    203 sp|P32397|PPOX_BACSU -            470   1.7e-05   25.0   0.0   1   2     6e-05     0.069   13.2   0.0     1    41     9    54     9    76 0.87 Pyridine nucleotide-disulphide oxidoreductase
Pyr_redox_3          PF13738.1    203 sp|P32397|PPOX_BACSU -            470   1.7e-05   25.0   0.0   2   2    0.0007       0.8    9.7   0.0    70   184   219   346   185   356 0.62 Pyridine nucleotide-disulphide oxidoreductase
Lycopene_cycl        PF05834.7    374 sp|P32397|PPOX_BACSU -            470    0.0012   17.8   0.2   2   2   0.00054      0.62    8.9   0.0    87   144   235   291   220   311 0.87 Lycopene cyclase protein
HI0933_like          PF03486.9    409 sp|P32397|PPOX_BACSU -            470    0.0015   17.1   0.9   1   2    0.0005      0.58    8.5   0.1     2    40     7    51     6    53 0.74 HI0933-like protein
Pyr_redox            PF00070.22    80 sp|P32397|PPOX_BACSU -            470    0.0022   18.3   0.5   1   1   9.9e-06     0.011   16.0   0.1     1    35     7    47     7    55 0.90 Pyridine nucleotide-disulphide oxidoreductase
Pyr_redox_2          PF07992.9    201 sp|P32397|PPOX_BACSU -            470    0.0022   17.9   0.0   1   1   5.9e-06    0.0067   16.3   0.0     1    39     7    50     7   150 0.83 Pyridine nucleotide-disulphide oxidoreductase
SEA                  PF01390.15   107 sp|P32397|PPOX_BACSU -            470    0.0043   16.7   0.0   1   1   6.8e-06    0.0077   15.8   0.0    27    89   225   297   217   313 0.78 SEA domain
Trp_halogenase       PF04820.9    454 sp|P32397|PPOX_BACSU -            470     0.015   13.9   0.1   1   1   2.3e-05     0.026   13.1   0.1     2    34     8    43     7    49 0.87 Tryptophan halogenase
FAD_binding_2        PF00890.19   417 sp|P32397|PPOX_BACSU -            470     0.042   12.7   0.1   1   2   0.00017      0.19   10.5   0.0     2    21     8    27     7    59 0.67 FAD binding domain
Strep_67kDa_ant      PF06100.6    500 sp|P32397|PPOX_BACSU -            470     0.061   11.6   0.0   1   1   9.9e-05      0.11   10.7   0.0     2    60     5    63     4    71 0.78 Streptococcal 67 kDa myosin-cross-reactive antigen like family
Condensation         PF00668.15   301 sp|P39845|PPSA_BACSU -           2561  2.9e-261  863.6   3.9   1   3     7e-78   1.3e-74  250.7   0.2     2   301     3   300     2   300 0.98 Condensation domain
Condensation         PF00668.15   301 sp|P39845|PPSA_BACSU -           2561  2.9e-261  863.6   3.9   2   3  3.7e-101   6.9e-98  327.2   0.0     2   300  1049  1337  1048  1338 0.99 Condensation domain
Condensation         PF00668.15   301 sp|P39845|PPSA_BACSU -           2561  2.9e-261  863.6   3.9   3   3   3.1e-88   5.7e-85  284.7   1.2     2   300  2090  2399  2089  2400 0.97 Condensation domain
AMP-binding          PF00501.23   417 sp|P39845|PPSA_BACSU -           2561    9e-207  686.4   0.0   1   2  7.9e-113  1.5e-109  366.2   0.0     1   417   464   864   464   864 0.88 AMP-binding enzyme
AMP-binding          PF00501.23   417 sp|P39845|PPSA_BACSU -           2561    9e-207  686.4   0.0   2   2   2.6e-98   4.9e-95  318.3   0.0     1   417  1504  1908  1504  1908 0.86 AMP-binding enzyme
HxxPF_rpt            PF13745.1     91 sp|P39845|PPSA_BACSU -           2561   4.6e-33  113.3   3.5   1   2   1.5e-08   2.8e-05   24.3   0.2     2    90   322   409   321   410 0.91 HxxPF-repeated domain
HxxPF_rpt            PF13745.1     91 sp|P39845|PPSA_BACSU -           2561   4.6e-33  113.3   3.5   2   2   1.8e-28   3.3e-25   88.2   0.0     1    91  1359  1449  1359  1449 0.99 HxxPF-repeated domain
AMP-binding_C        PF13193.1     73 sp|P39845|PPSA_BACSU -           2561   2.9e-29  101.8   1.0   1   2   4.5e-16   8.4e-13   49.0   0.1     1    73   872   941   872   941 0.94 AMP-binding enzyme C-terminal domain
AMP-binding_C        PF13193.1     73 sp|P39845|PPSA_BACSU -           2561   2.9e-29  101.8   1.0   2   2   1.6e-16     3e-13   50.5   0.1     1    73  1916  1988  1916  1988 0.89 AMP-binding enzyme C-terminal domain
PP-binding           PF00550.20    67 sp|P39845|PPSA_BACSU -           2561   4.6e-28   97.2   0.0   1   2   1.6e-16     3e-13   49.8   0.0     2    65   969  1030   968  1032 0.93 Phosphopantetheine attachment site
PP-binding           PF00550.20    67 sp|P39845|PPSA_BACSU -           2561   4.6e-28   97.2   0.0   2   2   8.7e-15   1.6e-11   44.2   0.0     5    67  2018  2077  2014  2077 0.93 Phosphopantetheine attachment site
SPOB_ab              PF14682.1    115 sp|P39845|PPSA_BACSU -           2561      0.14   11.9   4.4   1   3   0.00014      0.27   11.0   0.3    54    96   371   413   366   424 0.87 Sporulation initiation phospho-transferase B, C-terminal
Condensation         PF00668.15   301 sp|P39846|PPSB_BACSU -           2560  1.1e-270  894.6   4.5   1   3   5.7e-94   1.1e-90  303.6   0.0     2   299     8   308     7   310 0.98 Condensation domain
Condensation         PF00668.15   301 sp|P39846|PPSB_BACSU -           2560  1.1e-270  894.6   4.5   2   3   5.6e-95     1e-91  306.9   0.0     2   300  1053  1341  1052  1342 0.99 Condensation domain
Condensation         PF00668.15   301 sp|P39846|PPSB_BACSU -           2560  1.1e-270  894.6   4.5   3   3   6.5e-87   1.2e-83  280.4   4.5     2   300  2089  2392  2088  2393 0.98 Condensation domain
AMP-binding          PF00501.23   417 sp|P39846|PPSB_BACSU -           2560  2.7e-225  747.4   0.0   1   2  1.5e-110  2.7e-107  358.7   0.0     1   417   475   865   475   865 0.87 AMP-binding enzyme
AMP-binding          PF00501.23   417 sp|P39846|PPSB_BACSU -           2560  2.7e-225  747.4   0.0   2   2  4.3e-119    8e-116  386.8   0.0     1   417  1506  1903  1506  1903 0.87 AMP-binding enzyme
HxxPF_rpt            PF13745.1     91 sp|P39846|PPSB_BACSU -           2560   6.2e-32  109.7   0.6   2   3   1.8e-31   3.4e-28   97.7   0.2     1    91  1363  1453  1363  1453 0.99 HxxPF-repeated domain
AMP-binding_C        PF13193.1     73 sp|P39846|PPSB_BACSU -           2560   4.5e-29  101.2   0.2   1   2   1.3e-16   2.3e-13   50.8   0.0     1    73   873   946   873   946 0.90 AMP-binding enzyme C-terminal domain
AMP-binding_C        PF13193.1     73 sp|P39846|PPSB_BACSU -           2560   4.5e-29  101.2   0.2   2   2   1.9e-15   3.6e-12   47.0   0.0     1    73  1911  1986  1911  1986 0.92 AMP-binding enzyme C-terminal domain
PP-binding           PF00550.20    67 sp|P39846|PPSB_BACSU -           2560   4.2e-28   97.4   0.0   1   2   2.6e-15   4.9e-12   45.9   0.0     3    64   974  1033   972  1034 0.95 Phosphopantetheine attachment site
PP-binding           PF00550.20    67 sp|P39846|PPSB_BACSU -           2560   4.2e-28   97.4   0.0   2   2   3.8e-16     7e-13   48.6   0.0     4    67  2016  2076  2013  2076 0.94 Phosphopantetheine attachment site
Transferase          PF02458.10   432 sp|P39846|PPSB_BACSU -           2560     0.033   12.6   0.0   1   1   4.5e-05     0.083   11.3   0.0   151   191  1178  1218  1172  1235 0.78 Transferase family
BacteriocIIc_cy      PF12173.3     91 sp|P39846|PPSB_BACSU -           2560     0.052   13.5   0.0   1   1     6e-05      0.11   12.5   0.0    31    88   222   280   218   283 0.88 Bacteriocin class IIc cyclic gassericin A-like
Condensation         PF00668.15   301 sp|P39847|PPSC_BACSU -           2555  9.8e-267  881.6   8.2   1   3   5.5e-94   1.2e-90  303.4   0.3     2   299     8   304     7   306 0.97 Condensation domain
Condensation         PF00668.15   301 sp|P39847|PPSC_BACSU -           2555  9.8e-267  881.6   8.2   2   3  7.1e-100   1.5e-96  322.8   0.0     2   300  1055  1343  1054  1344 0.99 Condensation domain
Condensation         PF00668.15   301 sp|P39847|PPSC_BACSU -           2555  9.8e-267  881.6   8.2   3   3   2.6e-79   5.4e-76  255.3   4.5     2   299  2086  2388  2085  2390 0.93 Condensation domain
AMP-binding          PF00501.23   417 sp|P39847|PPSC_BACSU -           2555  2.4e-224  744.3   0.0   1   2  1.6e-113  3.4e-110  368.3   0.0     1   417   470   870   470   870 0.88 AMP-binding enzyme
AMP-binding          PF00501.23   417 sp|P39847|PPSC_BACSU -           2555  2.4e-224  744.3   0.0   2   2  2.7e-115  5.7e-112  374.1   0.0     1   417  1511  1903  1511  1903 0.87 AMP-binding enzyme
HxxPF_rpt            PF13745.1     91 sp|P39847|PPSC_BACSU -           2555   5.2e-30  103.6   2.1   1   2   2.4e-32     5e-29  100.4   0.6     1    91  1365  1457  1365  1457 0.96 HxxPF-repeated domain
AMP-binding_C        PF13193.1     73 sp|P39847|PPSC_BACSU -           2555   3.9e-29  101.4   0.1   1   2   4.5e-16   9.4e-13   48.9   0.0     1    73   878   947   878   947 0.94 AMP-binding enzyme C-terminal domain
AMP-binding_C        PF13193.1     73 sp|P39847|PPSC_BACSU -           2555   3.9e-29  101.4   0.1   2   2   3.3e-16   6.9e-13   49.3   0.0     1    73  1911  1984  1911  1984 0.92 AMP-binding enzyme C-terminal domain
PP-binding           PF00550.20    67 sp|P39847|PPSC_BACSU -           2555   9.6e-29   99.4   0.3   1   2   1.4e-16     3e-13   49.8   0.0     2    65   975  1036   974  1038 0.93 Phosphopantetheine attachment site
PP-binding           PF00550.20    67 sp|P39847|PPSC_BACSU -           2555   9.6e-29   99.4   0.3   2   2   2.3e-15   4.9e-12   45.9   0.0     2    64  2011  2070  2010  2073 0.94 Phosphopantetheine attachment site
Condensation         PF00668.15   301 sp|P94459|PPSD_BACSU -           3603         0 1117.1  12.7   1   4   3.8e-88   5.6e-85  284.8   3.4     2   299     8   304     7   305 0.97 Condensation domain
Condensation         PF00668.15   301 sp|P94459|PPSD_BACSU -           3603         0 1117.1  12.7   2   4   1.9e-86   2.8e-83  279.2   0.0     2   300  1054  1333  1053  1334 0.96 Condensation domain
Condensation         PF00668.15   301 sp|P94459|PPSD_BACSU -           3603         0 1117.1  12.7   3   4  1.1e-100   1.6e-97  326.0   0.0     2   300  2085  2373  2084  2374 0.99 Condensation domain
Condensation         PF00668.15   301 sp|P94459|PPSD_BACSU -           3603         0 1117.1  12.7   4   4   1.7e-71   2.5e-68  230.1   1.2     2   300  3117  3428  3116  3429 0.95 Condensation domain
AMP-binding          PF00501.23   417 sp|P94459|PPSD_BACSU -           3603         0 1078.7   0.0   1   3    2e-105    3e-102  342.1   0.0     1   417   469   865   469   865 0.84 AMP-binding enzyme
AMP-binding          PF00501.23   417 sp|P94459|PPSD_BACSU -           3603         0 1078.7   0.0   2   3  7.2e-113  1.1e-109  366.6   0.0     1   417  1500  1900  1500  1900 0.88 AMP-binding enzyme
AMP-binding          PF00501.23   417 sp|P94459|PPSD_BACSU -           3603         0 1078.7   0.0   3   3  8.2e-113  1.2e-109  366.4   0.0     1   417  2539  2932  2539  2932 0.88 AMP-binding enzyme
HxxPF_rpt            PF13745.1     91 sp|P94459|PPSD_BACSU -           3603     1e-60  202.0  12.1   1   3   1.6e-32   2.3e-29  101.5   1.0     1    91  1355  1445  1355  1445 0.99 HxxPF-repeated domain
HxxPF_rpt            PF13745.1     91 sp|P94459|PPSD_BACSU -           3603     1e-60  202.0  12.1   2   3   1.3e-31     2e-28   98.5   0.6     1    91  2395  2485  2395  2485 0.99 HxxPF-repeated domain
PP-binding           PF00550.20    67 sp|P94459|PPSD_BACSU -           3603   2.6e-44  149.3   0.3   1   3   1.8e-14   2.7e-11   43.5   0.0     2    64   974  1034   973  1037 0.94 Phosphopantetheine attachment site
PP-binding           PF00550.20    67 sp|P94459|PPSD_BACSU -           3603   2.6e-44  149.3   0.3   2   3     4e-16     6e-13   48.8   0.0     2    65  2005  2066  2004  2068 0.93 Phosphopantetheine attachment site
PP-binding           PF00550.20    67 sp|P94459|PPSD_BACSU -           3603   2.6e-44  149.3   0.3   3   3   4.7e-17     7e-14   51.8   0.0     3    67  3043  3104  3041  3104 0.95 Phosphopantetheine attachment site
AMP-binding_C        PF13193.1     73 sp|P94459|PPSD_BACSU -           3603   7.5e-39  132.5   0.1   1   3   9.3e-15   1.4e-11   45.1   0.0     1    73   873   946   873   946 0.88 AMP-binding enzyme C-terminal domain
AMP-binding_C        PF13193.1     73 sp|P94459|PPSD_BACSU -           3603   7.5e-39  132.5   0.1   2   3   8.2e-16   1.2e-12   48.5   0.1     1    73  1908  1977  1908  1977 0.94 AMP-binding enzyme C-terminal domain
AMP-binding_C        PF13193.1     73 sp|P94459|PPSD_BACSU -           3603   7.5e-39  132.5   0.1   3   3   2.9e-11   4.3e-08   33.9   0.1     1    73  2940  3013  2940  3013 0.92 AMP-binding enzyme C-terminal domain
UPF0122              PF04297.9    101 sp|P94459|PPSD_BACSU -           3603       9.5    6.3   8.9   1   1   0.00042      0.62   10.1   0.9    13    86  1338  1412  1336  1426 0.87 Putative helix-turn-helix protein, YlxM / p13 like
AMP-binding          PF00501.23   417 sp|O31827|PPSE_BACSU -           1279  1.1e-108  363.2   0.0   2   2  3.4e-111  5.7e-108  360.9   0.0     1   417   482   874   482   874 0.90 AMP-binding enzyme
Condensation         PF00668.15   301 sp|O31827|PPSE_BACSU -           1279   8.5e-88  294.0   0.3   1   1   5.1e-91   8.5e-88  294.0   0.3     3   299    16   315    14   317 0.98 Condensation domain
Thioesterase         PF00975.15   229 sp|O31827|PPSE_BACSU -           1279   4.5e-39  135.0   0.0   1   1   6.1e-42     1e-38  133.8   0.0     1   227  1068  1271  1068  1273 0.95 Thioesterase domain
PP-binding           PF00550.20    67 sp|O31827|PPSE_BACSU -           1279   3.4e-15   56.0   0.0   1   1   8.7e-18   1.4e-14   54.0   0.1     2    66   983  1045   982  1046 0.95 Phosphopantetheine attachment site
AMP-binding_C        PF13193.1     73 sp|O31827|PPSE_BACSU -           1279   7.2e-11   42.8   0.0   1   1   1.2e-13     2e-10   41.4   0.0     1    73   882   954   882   954 0.87 AMP-binding enzyme C-terminal domain
Abhydrolase_3        PF07859.8    211 sp|O31827|PPSE_BACSU -           1279   0.00012   21.7   0.0   1   1     2e-07   0.00033   20.2   0.0    71   147  1121  1203  1101  1216 0.78 alpha/beta hydrolase fold
AATase               PF07247.7    480 sp|O31827|PPSE_BACSU -           1279     0.033   12.7   0.2   1   2   5.2e-05     0.086   11.3   0.0   243   291   230   278   198   289 0.81 Alcohol acetyltransferase
Abhydrolase_6        PF12697.2    228 sp|O31827|PPSE_BACSU -           1279     0.041   13.7   0.0   1   1   0.00012      0.19   11.5   0.0    46   107  1099  1166  1083  1225 0.68 Alpha/beta hydrolase family
DUF2974              PF11187.3    224 sp|O31827|PPSE_BACSU -           1279     0.084   12.2   0.0   1   1   0.00011      0.18   11.1   0.0    72   108  1109  1146  1098  1159 0.78 Protein of unknown function (DUF2974)
PPDK_N               PF01326.14   329 sp|O34309|PPS_BACSU  -            866  1.4e-101  339.8   0.1   1   1  4.5e-105  2.2e-101  339.1   0.1     6   317    17   326    12   333 0.96 Pyruvate phosphate dikinase, PEP/pyruvate binding domain
PEP-utilizers        PF00391.18    81 sp|O34309|PPS_BACSU  -            866   1.8e-22   78.7   0.1   1   1   8.1e-26     4e-22   77.5   0.1     7    81   788   861   784   861 0.95 PEP-utilising enzyme, mobile domain
DEAD                 PF00270.24   169 sp|P94461|PRIA_BACSU -            805   5.2e-18   65.1   0.1   1   1   1.8e-20   1.7e-17   63.3   0.0     4   165   272   434   269   438 0.79 DEAD/DEAH box helicase
ResIII               PF04851.10   184 sp|P94461|PRIA_BACSU -            805   3.1e-16   59.7   1.1   2   2   8.8e-17   8.7e-14   51.7   0.0     3   182   267   430   265   432 0.78 Type III restriction enzyme, res subunit
Helicase_C           PF00271.26    78 sp|P94461|PRIA_BACSU -            805     5e-09   35.8   0.0   2   2   7.4e-11   7.3e-08   32.1   0.0    19    77   592   662   577   663 0.87 Helicase conserved C-terminal domain
Zot                  PF05707.7    193 sp|P94461|PRIA_BACSU -            805   6.9e-05   22.4   0.0   1   1   1.7e-07   0.00017   21.1   0.0     2   121   290   425   289   451 0.71 Zonular occludens toxin (Zot)
PIF1                 PF05970.9    364 sp|P94461|PRIA_BACSU -            805    0.0002   20.4   0.0   1   1   3.5e-07   0.00035   19.6   0.0     2    54   268   320   267   327 0.83 PIF1-like helicase
T2SE                 PF00437.15   272 sp|P94461|PRIA_BACSU -            805    0.0011   17.8   0.4   1   2   4.4e-06    0.0043   15.9   0.1    97   162   227   323   144   335 0.71 Type II/IV secretion system protein
TrwB_AAD_bind        PF10412.4    386 sp|P94461|PRIA_BACSU -            805    0.0018   17.0   0.2   1   1   4.8e-06    0.0047   15.5   0.0    12    49   285   322   280   336 0.89 Type IV secretion-system coupling protein DNA-binding domain
AAA_30               PF13604.1    196 sp|P94461|PRIA_BACSU -            805    0.0049   16.4   0.0   1   1   1.5e-05     0.015   14.9   0.0     2   101   268   392   267   403 0.63 AAA domain
AAA_19               PF13245.1     76 sp|P94461|PRIA_BACSU -            805    0.0057   16.3   0.1   1   1   3.7e-05     0.037   13.7   0.0     8    48   284   323   279   351 0.76 Part of AAA domain
zinc-ribbons_6       PF07191.7     70 sp|P94461|PRIA_BACSU -            805     0.011   15.4   3.7   1   1   3.2e-05     0.031   14.0   3.7     3    39   518   556   517   564 0.89 zinc-ribbons
Arch_ATPase          PF01637.13   234 sp|P94461|PRIA_BACSU -            805     0.028   14.1   2.7   1   1     3e-05      0.03   14.0   0.0     7    68   275   336   272   471 0.66 Archaeal ATPase
zf-ISL3              PF14690.1     47 sp|P94461|PRIA_BACSU -            805         4    7.5  11.6   1   1   0.00053      0.53   10.3   0.1     2    23   547   568   546   569 0.95 zinc-finger of transposase IS204/IS1001/IS1096/IS1165
AAA_PrkA             PF08298.6    358 sp|P39134|PRKA_BACSU -            631  9.4e-161  534.4   0.1   1   1  1.2e-163  2.2e-160  533.2   0.1     2   358    22   371    21   371 0.99 PrkA AAA domain
PrkA                 PF06798.7    254 sp|P39134|PRKA_BACSU -            631   4.9e-91  304.5  13.3   1   1   5.3e-94   9.8e-91  303.5  13.3     1   254   375   624   375   624 0.99 PrkA serine protein kinase C-terminal domain
SWIB                 PF02201.13    76 sp|P39134|PRKA_BACSU -            631     0.015   14.9   0.1   1   1   2.7e-05      0.05   13.2   0.1    27    61   497   530   473   540 0.86 SWIB/MDM2 domain
AAA_16               PF13191.1    185 sp|P39134|PRKA_BACSU -            631     0.025   14.5   0.0   1   2   7.7e-05      0.14   12.1   0.0     1    80    68   156    68   175 0.78 AAA ATPase domain
Sigma54_activat      PF00158.21   168 sp|P39134|PRKA_BACSU -            631     0.036   13.5   0.0   1   1   7.5e-05      0.14   11.6   0.0    86   167   240   320   228   321 0.92 Sigma-54 interaction domain
AAA_29               PF13555.1     62 sp|P39134|PRKA_BACSU -            631      0.15   11.6   0.0   1   1   0.00017      0.31   10.5   0.0    11    40    83   112    76   116 0.84 P-loop containing region of AAA domain
Pkinase              PF00069.20   260 sp|O34507|PRKC_BACSU -            648   2.9e-62  210.1   0.0   1   1   2.8e-65   4.1e-62  209.6   0.0     1   253    11   261    11   267 0.96 Protein kinase domain
PASTA                PF03793.14    63 sp|O34507|PRKC_BACSU -            648     2e-42  142.6  19.2   1   3   7.9e-14   1.2e-10   40.9   1.3     1    62   360   423   360   424 0.90 PASTA domain
PASTA                PF03793.14    63 sp|O34507|PRKC_BACSU -            648     2e-42  142.6  19.2   2   3   3.2e-20   4.7e-17   61.3   2.0     2    62   430   491   429   492 0.97 PASTA domain
PASTA                PF03793.14    63 sp|O34507|PRKC_BACSU -            648     2e-42  142.6  19.2   3   3   3.9e-17   5.8e-14   51.4   0.4     2    62   498   558   497   559 0.96 PASTA domain
Pkinase_Tyr          PF07714.12   259 sp|O34507|PRKC_BACSU -            648   1.3e-39  135.8   0.0   1   1   1.3e-42     2e-39  135.2   0.0     3   251    13   258    11   264 0.89 Protein tyrosine kinase
Kinase-like          PF14531.1    289 sp|O34507|PRKC_BACSU -            648   3.1e-06   26.3   0.0   1   1     4e-09   5.9e-06   25.4   0.0   153   254   116   213    94   230 0.76 Kinase-like
APH                  PF01636.18   239 sp|O34507|PRKC_BACSU -            648   1.5e-05   24.8   0.5   1   2   0.00012      0.17   11.5   0.0    25   107    42   127    14   128 0.80 Phosphotransferase enzyme family
APH                  PF01636.18   239 sp|O34507|PRKC_BACSU -            648   1.5e-05   24.8   0.5   2   2   5.8e-05     0.087   12.5   0.9   161   196   126   157   121   158 0.75 Phosphotransferase enzyme family
Kdo                  PF06293.9    206 sp|O34507|PRKC_BACSU -            648   0.00012   21.2   0.1   1   1   1.5e-07   0.00022   20.3   0.1    94   165    86   153    84   161 0.86 Lipopolysaccharide kinase (Kdo/WaaP) family
RIO1                 PF01163.17   189 sp|O34507|PRKC_BACSU -            648   0.00091   18.6   2.2   1   1   8.6e-07    0.0013   18.1   0.5    83   153    86   156    83   166 0.79 RIO1 family
Seadorna_VP7         PF07387.6    308 sp|O34507|PRKC_BACSU -            648    0.0024   16.7   0.3   1   1   2.9e-06    0.0043   15.9   0.3   153   188   121   154   109   174 0.72 Seadornavirus VP7
YrbL-PhoP_reg        PF10707.4    199 sp|O34507|PRKC_BACSU -            648     0.015   14.6   0.1   1   1   3.5e-05     0.052   12.8   0.0   107   158    93   149    91   156 0.72 PhoP regulatory network protein YrbL
PBP1_TM              PF14812.1     81 sp|O34507|PRKC_BACSU -            648      0.04   14.2   0.1   1   1   2.7e-05      0.04   14.2   0.1    34    79   288   341   267   343 0.58 Transmembrane domain of transglycosylase PBP1 at N-terminal
PrmA                 PF06325.8    295 sp|P54460|PRMA_BACSU -            311  4.4e-109  364.1   1.4   1   1  7.3e-112  4.9e-109  363.9   1.4     1   294     2   311     2   311 0.89 Ribosomal protein L11 methyltransferase (PrmA)
MTS                  PF05175.9    170 sp|P54460|PRMA_BACSU -            311   2.6e-17   62.7   0.5   1   1   8.5e-20   5.7e-17   61.6   0.5     8   153   150   291   143   308 0.84 Methyltransferase small domain
Methyltransf_26      PF13659.1    117 sp|P54460|PRMA_BACSU -            311   9.7e-11   41.7   0.0   1   1   8.9e-13     6e-10   39.1   0.0     1   111   176   271   176   274 0.92 Methyltransferase domain
Methyltransf_18      PF12847.2    112 sp|P54460|PRMA_BACSU -            311   2.1e-10   41.1   0.1   1   1   5.4e-13   3.6e-10   40.4   0.1     1   109   175   273   175   276 0.84 Methyltransferase domain
Methyltransf_31      PF13847.1    152 sp|P54460|PRMA_BACSU -            311   4.9e-10   39.1   0.2   1   1   1.3e-12   8.8e-10   38.3   0.2     2   120   174   287   173   307 0.80 Methyltransferase domain
Met_10               PF02475.11   200 sp|P54460|PRMA_BACSU -            311   4.6e-09   36.1   0.1   1   1   1.1e-11   7.7e-09   35.4   0.1    95   196   169   269   166   277 0.87 Met-10+ like-protein
Methyltransf_23      PF13489.1    161 sp|P54460|PRMA_BACSU -            311   3.7e-08   33.2   0.1   1   2   5.2e-09   3.5e-06   26.8   0.0     9   112   165   272   159   278 0.78 Methyltransferase domain
Methyltransf_12      PF08242.7     99 sp|P54460|PRMA_BACSU -            311   9.9e-07   29.1   0.1   1   1   3.2e-09   2.1e-06   28.1   0.1     2    99   181   271   180   271 0.83 Methyltransferase domain
UPF0020              PF01170.13   180 sp|P54460|PRMA_BACSU -            311   7.6e-06   25.6   0.1   1   1   4.2e-08   2.8e-05   23.7   0.1    26   113   173   248   171   249 0.92 Putative RNA methylase family UPF0020
Methyltransf_11      PF08241.7     95 sp|P54460|PRMA_BACSU -            311   1.1e-05   25.8   0.0   1   1   4.1e-08   2.7e-05   24.5   0.0     1    94   180   272   180   273 0.91 Methyltransferase domain
CMAS                 PF02353.15   273 sp|P54460|PRMA_BACSU -            311   0.00011   21.3   0.6   1   1   2.3e-07   0.00016   20.9   0.1    60   189   173   298   164   303 0.87 Mycolic acid cyclopropane synthetase
PCMT                 PF01135.14   210 sp|P54460|PRMA_BACSU -            311   0.00015   21.3   0.2   1   1   3.4e-07   0.00023   20.7   0.2    63   183   163   286   137   310 0.67 Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT)
NNMT_PNMT_TEMT       PF01234.12   256 sp|P54460|PRMA_BACSU -            311   0.00026   20.0   0.5   1   2   0.00024      0.16   10.9   0.0    51    93   170   212   156   249 0.77 NNMT/PNMT/TEMT family
TRM                  PF02005.11   377 sp|P54460|PRMA_BACSU -            311   0.00041   19.3   0.0   1   1   1.1e-06   0.00077   18.4   0.0    33   124   162   244   148   248 0.80 N2,N2-dimethylguanosine tRNA methyltransferase
Cons_hypoth95        PF03602.10   183 sp|P54460|PRMA_BACSU -            311     0.002   17.5   0.1   1   1   1.1e-05    0.0076   15.6   0.0    42   102   175   234   155   248 0.85 Conserved hypothetical protein 95
Methyltransf_16      PF10294.4    174 sp|P54460|PRMA_BACSU -            311    0.0021   17.5   0.2   1   1     6e-06     0.004   16.6   0.2    45   104   174   231   155   256 0.81 Putative methyltransferase
GCD14                PF08704.5    247 sp|P54460|PRMA_BACSU -            311     0.004   16.7   0.0   1   1   9.6e-06    0.0065   16.0   0.0    34   167   167   296   159   305 0.67 tRNA methyltransferase complex GCD14 subunit
FtsJ                 PF01728.14   181 sp|P54460|PRMA_BACSU -            311    0.0072   16.3   0.1   1   1     2e-05     0.014   15.4   0.1    11   162   167   299   163   302 0.80 FtsJ-like methyltransferase
RrnaAD               PF00398.15   262 sp|P54460|PRMA_BACSU -            311     0.009   15.0   0.0   1   1   2.4e-05     0.016   14.2   0.0    28    76   173   222   163   249 0.81 Ribosomal RNA adenine dimethylase
GidB                 PF02527.10   184 sp|P54460|PRMA_BACSU -            311     0.013   14.6   0.6   1   1   4.1e-05     0.028   13.5   0.6    39   146   166   273   162   304 0.66 rRNA small subunit methyltransferase G
Methyltransf_32      PF13679.1    141 sp|P54460|PRMA_BACSU -            311      0.13   11.9   0.1   1   1   0.00065      0.44   10.2   0.0    24    74   174   218   159   250 0.68 Methyltransferase domain
MTS                  PF05175.9    170 sp|P45873|PRMC_BACSU -            288   1.5e-17   63.4   0.0   1   1   4.1e-20   2.2e-17   62.9   0.0    28   135   112   220   103   250 0.80 Methyltransferase small domain
Methyltransf_31      PF13847.1    152 sp|P45873|PRMC_BACSU -            288   1.8e-17   63.3   0.1   1   1   4.8e-20   2.5e-17   62.8   0.1     3   112   115   247   113   280 0.79 Methyltransferase domain
Methyltransf_26      PF13659.1    117 sp|P45873|PRMC_BACSU -            288   7.6e-16   58.1   0.0   1   1   2.2e-18   1.2e-15   57.6   0.0     3   113   118   244   116   248 0.85 Methyltransferase domain
Methyltransf_18      PF12847.2    112 sp|P45873|PRMC_BACSU -            288   7.2e-13   49.0   0.0   1   1   2.8e-15   1.5e-12   48.0   0.0     4    87   118   201   114   220 0.84 Methyltransferase domain
PrmA                 PF06325.8    295 sp|P45873|PRMC_BACSU -            288   1.1e-08   34.5   0.0   1   1   3.1e-11   1.7e-08   33.9   0.0   152   232   101   190    94   194 0.75 Ribosomal protein L11 methyltransferase (PrmA)
Methyltransf_25      PF13649.1    101 sp|P45873|PRMC_BACSU -            288   3.1e-08   33.9   0.0   1   1     1e-10   5.3e-08   33.1   0.0     1    94   119   206   119   212 0.84 Methyltransferase domain
UPF0020              PF01170.13   180 sp|P45873|PRMC_BACSU -            288   3.4e-07   30.0   0.0   1   1   1.9e-09     1e-06   28.4   0.0    37   116   124   193   114   207 0.82 Putative RNA methylase family UPF0020
Cons_hypoth95        PF03602.10   183 sp|P45873|PRMC_BACSU -            288     4e-07   29.6   0.0   1   1   1.1e-09   5.9e-07   29.0   0.0    30   131    98   200    80   218 0.79 Conserved hypothetical protein 95
Methyltransf_11      PF08241.7     95 sp|P45873|PRMC_BACSU -            288   1.2e-05   25.7   0.0   1   1   3.6e-08   1.9e-05   25.0   0.0     1    67   120   190   120   211 0.83 Methyltransferase domain
Methyltransf_32      PF13679.1    141 sp|P45873|PRMC_BACSU -            288   1.2e-05   25.0   0.0   1   1   3.6e-08   1.9e-05   24.3   0.0    14    86   105   168    95   189 0.81 Methyltransferase domain
UPF0146              PF03686.8    127 sp|P45873|PRMC_BACSU -            288   3.1e-05   23.7   0.0   1   1   1.1e-07   5.7e-05   22.9   0.0    11    96   113   208   103   227 0.78 Uncharacterised protein family (UPF0146)
Methyltransf_12      PF08242.7     99 sp|P45873|PRMC_BACSU -            288     5e-05   23.7   0.0   1   1   1.7e-07     9e-05   22.8   0.0     1    73   120   190   120   200 0.84 Methyltransferase domain
Methyltransf_4       PF02390.12   197 sp|P45873|PRMC_BACSU -            288   5.2e-05   22.3   0.0   1   1   1.8e-07   9.5e-05   21.5   0.0    12    78   107   173    95   190 0.86 Putative methyltransferase
FmrO                 PF07091.6    251 sp|P45873|PRMC_BACSU -            288   0.00023   20.2   0.0   1   1   6.6e-07   0.00035   19.6   0.0    85   166    96   176    83   189 0.90 Ribosomal RNA methyltransferase (FmrO)
Methyltransf_15      PF09445.5    164 sp|P45873|PRMC_BACSU -            288   0.00057   19.4   0.0   1   1   1.7e-06   0.00091   18.8   0.0     4    79   119   192   116   197 0.85 RNA cap guanine-N2 methyltransferase
Methyltransf_23      PF13489.1    161 sp|P45873|PRMC_BACSU -            288    0.0011   18.6   0.0   1   1   3.9e-06    0.0021   17.8   0.0    20    84   113   189    95   191 0.58 Methyltransferase domain
Ubie_methyltran      PF01209.13   233 sp|P45873|PRMC_BACSU -            288    0.0014   17.7   0.0   1   1     4e-06    0.0021   17.2   0.0    49   106   117   172   103   189 0.82 ubiE/COQ5 methyltransferase family
Methyltransf_10      PF05971.7    299 sp|P45873|PRMC_BACSU -            288    0.0039   16.3   0.0   1   1   1.1e-05    0.0059   15.7   0.0    90   194   101   200    72   212 0.77 Protein of unknown function (DUF890)
RrnaAD               PF00398.15   262 sp|P45873|PRMC_BACSU -            288    0.0064   15.5   0.0   1   1   1.9e-05      0.01   14.8   0.0    30   107   115   193    75   202 0.79 Ribosomal RNA adenine dimethylase
GidB                 PF02527.10   184 sp|P45873|PRMC_BACSU -            288    0.0073   15.4   0.0   1   1   2.2e-05     0.012   14.8   0.0    41    88   109   155    89   190 0.65 rRNA small subunit methyltransferase G
Met_10               PF02475.11   200 sp|P45873|PRMC_BACSU -            288     0.016   14.8   0.0   1   1   4.7e-05     0.025   14.1   0.0   104   187   118   201   103   215 0.81 Met-10+ like-protein
PCMT                 PF01135.14   210 sp|P45873|PRMC_BACSU -            288      0.02   14.4   0.0   1   1   5.2e-05     0.028   13.9   0.0    74   132   116   172    74   204 0.81 Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT)
Eco57I               PF07669.6    106 sp|P45873|PRMC_BACSU -            288      0.02   15.2   0.0   1   1   9.4e-05      0.05   13.9   0.0     2    38   183   231   182   278 0.64 Eco57I restriction-modification methylase
DUF43                PF01861.11   243 sp|P45873|PRMC_BACSU -            288     0.023   13.6   0.0   1   1   7.2e-05     0.038   12.9   0.0    57   122   129   193   113   202 0.89 Protein of unknown function DUF43
DUF633               PF04816.7    205 sp|P45873|PRMC_BACSU -            288     0.037   13.3   0.1   1   1    0.0001     0.054   12.8   0.1     1    70   119   187   119   189 0.85 Family of unknown function (DUF633)
N6_Mtase             PF02384.11   311 sp|P45873|PRMC_BACSU -            288      0.08   12.0   0.0   1   1   0.00021      0.11   11.5   0.0    50   152   119   209    96   219 0.68 N-6 DNA Methylase
Methyltransf_2       PF00891.13   242 sp|P45873|PRMC_BACSU -            288     0.095   11.8   0.0   1   1   0.00029      0.15   11.1   0.0   103   156   117   176    94   187 0.83 O-methyltransferase
Methyltransf_16      PF10294.4    174 sp|P45873|PRMC_BACSU -            288     0.097   12.1   0.0   1   1   0.00035      0.18   11.2   0.0    42    91   111   161    96   203 0.79 Putative methyltransferase
Aldedh               PF00171.17   462 sp|P39821|PROA_BACSU -            415   4.3e-18   64.9   3.0   1   2   5.5e-15   2.7e-11   42.4   0.1    86   298    71   284     2   306 0.75 Aldehyde dehydrogenase family
Aldedh               PF00171.17   462 sp|P39821|PROA_BACSU -            415   4.3e-18   64.9   3.0   2   2   4.4e-09   2.2e-05   23.0   0.3   366   436   307   376   299   384 0.89 Aldehyde dehydrogenase family
dTMP_synthase        PF02593.9    218 sp|P39821|PROA_BACSU -            415   0.00028   20.3   0.1   1   1   1.3e-07   0.00063   19.1   0.1    78   148   260   329   214   334 0.81 Thymidylate synthase
AA_kinase            PF00696.23   242 sp|P39820|PROB_BACSU -            365   1.9e-41  142.2   0.1   1   1   3.3e-45   2.4e-41  141.8   0.1     1   241     4   233     4   234 0.92 Amino acid kinase family
PUA                  PF01472.15    74 sp|P39820|PROB_BACSU -            365   5.8e-20   70.8   1.4   2   3   2.2e-23   1.7e-19   69.3   0.4     1    71   277   347   277   350 0.97 PUA domain
Pro_dh               PF01619.13   313 sp|O32179|PROD1_BACSU -            302   4.2e-81  272.3   3.1   1   1   3.3e-85   4.9e-81  272.1   3.1     1   312    32   301    32   302 0.98 Proline dehydrogenase
Pro_dh               PF01619.13   313 sp|P94390|PROD2_BACSU -            303   3.6e-83  279.1   1.3   1   1   5.6e-87   4.2e-83  278.9   1.3     2   313    34   303    33   303 0.98 Proline dehydrogenase
AA_kinase            PF00696.23   242 sp|O07509|PROJ_BACSU -            371   3.6e-42  144.5   0.5   1   1   6.6e-46   4.9e-42  144.1   0.5     1   237     8   233     8   237 0.92 Amino acid kinase family
PUA                  PF01472.15    74 sp|O07509|PROJ_BACSU -            371   4.3e-15   55.1   0.2   3   3     3e-18   2.2e-14   52.8   0.0     1    71   281   352   281   355 0.93 PUA domain
PEP_mutase           PF13714.1    238 sp|P54528|PRPB_BACSU -            301   4.3e-57  193.0   1.8   1   1     1e-60     5e-57  192.8   1.8     1   234    18   255    18   259 0.93 Phosphoenolpyruvate phosphomutase
ICL                  PF00463.16   526 sp|P54528|PRPB_BACSU -            301   4.6e-19   68.0   0.3   1   1   1.6e-22   8.1e-19   67.2   0.3   150   253    87   185    71   205 0.90 Isocitrate lyase family
MmgE_PrpD            PF03972.9    445 sp|P45859|PRPD_BACSU -            472  2.8e-178  592.6   0.0   1   1  2.1e-182  3.1e-178  592.5   0.0     1   444     5   463     5   464 0.99 MmgE/PrpD family
Metallophos          PF00149.23   200 sp|O31614|PRPE_BACSU -            244   2.4e-13   49.9   0.0   1   1   4.7e-17   3.5e-13   49.4   0.0     5   198     5   194     1   196 0.88 Calcineurin-like phosphoesterase
Metallophos_2        PF12850.2    156 sp|O31614|PRPE_BACSU -            244   5.1e-08   32.8   0.0   1   1   3.2e-11   2.4e-07   30.7   0.0     1   138     1   213     1   226 0.65 Calcineurin-like phosphoesterase superfamily domain
Rotamase_3           PF13616.1    117 sp|P24327|PRSA_BACSU -            292   8.3e-31  106.6   2.0   2   2   6.7e-34   8.3e-31  106.6   2.0    12   116   133   225   105   226 0.90 PPIC-type PPIASE domain
Rotamase             PF00639.16    95 sp|P24327|PRSA_BACSU -            292   2.4e-26   92.3   0.7   1   1   1.9e-29   2.4e-26   92.3   0.7     1    94   141   223   141   224 0.92 PPIC-type PPIASE domain
Rotamase_2           PF13145.1    121 sp|P24327|PRSA_BACSU -            292   1.2e-16   61.4   2.4   2   3   9.6e-20   1.2e-16   61.4   2.4     1   108   121   225   121   234 0.87 PPIC-type PPIASE domain
Trigger_C            PF05698.9    162 sp|P24327|PRSA_BACSU -            292   3.4e-05   23.7   4.6   1   3   2.7e-08   3.4e-05   23.7   4.6    77   158    35   116    21   120 0.91 Bacterial trigger factor protein (TF) C-terminus
SurA_N_3             PF13624.1    154 sp|P24327|PRSA_BACSU -            292   6.6e-05   22.9  13.2   2   3   1.1e-05     0.014   15.3   4.1    49   107    68   128    61   169 0.89 SurA N-terminal domain
SurA_N               PF09312.6    118 sp|P24327|PRSA_BACSU -            292    0.0014   18.5   3.7   2   2   0.00054      0.66    9.8   0.2    28    86   222   285   212   291 0.73 SurA N-terminal domain
NifU_N               PF01592.11   127 sp|P24327|PRSA_BACSU -            292     0.035   14.0   1.0   1   2   0.00012      0.15   11.9   0.0    66   101    49    88    44   108 0.79 NifU-like N terminal domain
ASL_C                PF08328.6    115 sp|P24327|PRSA_BACSU -            292      0.61    9.9   4.7   2   2   0.00033       0.4   10.5   0.2    38    83   235   279   211   287 0.81 Adenylosuccinate lyase C-terminal
LepA_C               PF06421.7    108 sp|P24327|PRSA_BACSU -            292       8.7    6.3  11.9   1   2   0.00071      0.88    9.4   0.1    39    75     3    39     1    53 0.89 GTP-binding protein LepA C-terminus
PrsW-protease        PF13367.1    191 sp|P50738|PRSW_BACSU -            218   1.4e-40  138.5  13.0   1   1   1.2e-44   1.8e-40  138.2  13.0     1   191    28   199    28   199 0.92 Protease prsW family
PS_Dcarbxylase       PF02666.10   202 sp|P39822|PSD_BACSU  -            263   7.3e-55  185.4   0.1   1   1   5.8e-59   8.7e-55  185.1   0.1     1   202    63   261    63   261 0.97 Phosphatidylserine decarboxylase
PsiE                 PF06146.7     69 sp|P54445|PSIE_BACSU -            138   1.2e-19   70.3   3.5   2   2   1.6e-23   1.2e-19   70.3   3.5     1    68    59   123    59   124 0.95 Phosphate-starvation-inducible E
Arteri_Gl            PF00951.13   179 sp|P54445|PSIE_BACSU -            138       1.7    8.1  11.0   2   2   3.5e-05      0.26   10.8   6.8    16    99    43   126    35   136 0.86 Arterivirus GL envelope glycoprotein
ComA                 PF02679.10   245 sp|O06739|PSLS_BACSU -            252   3.5e-86  288.1   0.0   1   1   2.7e-90     4e-86  288.0   0.0     3   245     8   248     6   248 0.99 (2R)-phospho-3-sulfolactate synthase (ComA)
PspA_IM30            PF04012.7    221 sp|P54617|PSPA_BACSU -            227     1e-41  142.7  26.4   1   1   8.5e-45   1.1e-41  142.5  26.4     3   218     4   222     2   225 0.96 PspA/IM30 family
TBPIP                PF07106.8    169 sp|P54617|PSPA_BACSU -            227      0.24   10.9  13.0   3   3   0.00018      0.25   10.8   3.9    75   163    95   182    91   188 0.84 Tat binding protein 1(TBP-1)-interacting protein (TBPIP)
BLOC1_2              PF10046.4     99 sp|P54617|PSPA_BACSU -            227      0.27   11.3  13.5   2   3   5.4e-05     0.072   13.2   2.4    18    81    96   158    88   179 0.78 Biogenesis of lysosome-related organelles complex-1 subunit 2
DUF972               PF06156.8    107 sp|P54617|PSPA_BACSU -            227       1.1    9.6  14.6   1   2   0.00039      0.52   10.6   3.7    13    78    29    97    14    99 0.79 Protein of unknown function (DUF972)
Cluap1               PF10234.4    267 sp|P54617|PSPA_BACSU -            227       1.4    8.0  15.2   2   2   0.00025      0.34   10.0   8.3    83   188    67   169    62   195 0.78 Clusterin-associated protein-1
CDP-OH_P_transf      PF01066.16   101 sp|P39823|PSS_BACSU  -            177   1.8e-15   57.0   5.6   1   2   5.9e-19   1.8e-15   57.0   5.6     3    98     3    97     1   101 0.92 CDP-alcohol phosphatidyltransferase
TPT                  PF03151.11   153 sp|P39823|PSS_BACSU  -            177    0.0035   16.9   1.4   1   1   2.8e-06    0.0084   15.7   1.3    35   117    19   105    14   133 0.94 Triose-phosphate Transporter family
Glucos_trans_II      PF14264.1    319 sp|P39823|PSS_BACSU  -            177    0.0053   15.8   6.7   2   2   1.8e-06    0.0053   15.8   6.7    46   123    85   159    70   165 0.87 Glucosyl transferase GtrII
DUF2107              PF09880.4     76 sp|P39823|PSS_BACSU  -            177     0.026   14.3   3.8   2   2   0.00026      0.78    9.6   0.3    24    48   115   139    94   158 0.76 Predicted membrane protein (DUF2107)
ABC_membrane         PF00664.18   275 sp|P39823|PSS_BACSU  -            177       1.7    8.0   7.7   2   2   0.00033      0.97    8.7   0.4   130   171   129   169   113   174 0.85 ABC transporter transmembrane region
ABC_tran             PF00005.22   137 sp|P46342|PSTB1_BACSU -            260     2e-33  115.5   0.0   1   1     7e-36   3.1e-33  114.9   0.0     1   137    29   185    29   185 0.92 ABC transporter
AAA_21               PF13304.1    303 sp|P46342|PSTB1_BACSU -            260   1.7e-17   64.3   0.9   1   2   9.8e-08   4.3e-05   23.6   0.2     1    51    41    92    41   118 0.63 AAA domain
AAA_21               PF13304.1    303 sp|P46342|PSTB1_BACSU -            260   1.7e-17   64.3   0.9   2   2   1.4e-12   6.3e-10   39.4   0.0   185   298   129   214   115   216 0.83 AAA domain
SMC_N                PF02463.14   220 sp|P46342|PSTB1_BACSU -            260   4.6e-09   35.8   0.9   1   1     1e-10   4.6e-08   32.5   0.9    22   206    37   222    26   233 0.72 RecF/RecN/SMC N terminal domain
AAA_23               PF13476.1    202 sp|P46342|PSTB1_BACSU -            260   5.1e-06   26.9   0.2   1   1   1.6e-08   7.1e-06   26.4   0.2    13   119    30   147    23   244 0.62 AAA domain
DUF258               PF03193.11   161 sp|P46342|PSTB1_BACSU -            260   7.2e-05   22.0   0.0   1   1   3.2e-07   0.00014   21.0   0.0    20    58    23    62     4    93 0.78 Protein of unknown function, DUF258
AAA_16               PF13191.1    185 sp|P46342|PSTB1_BACSU -            260   0.00026   21.0   0.1   1   1   2.9e-06    0.0012   18.8   0.1    20   166    35   222    24   239 0.75 AAA ATPase domain
AAA_29               PF13555.1     62 sp|P46342|PSTB1_BACSU -            260   0.00027   20.3   0.0   1   1   1.1e-06   0.00049   19.5   0.0    18    44    35    60    19    79 0.73 P-loop containing region of AAA domain
AAA_15               PF13175.1    415 sp|P46342|PSTB1_BACSU -            260   0.00045   19.3   7.3   1   2   0.00082      0.36    9.8   2.3    13    55    30    86    25   141 0.60 AAA ATPase domain
AAA_15               PF13175.1    415 sp|P46342|PSTB1_BACSU -            260   0.00045   19.3   7.3   2   2    0.0003      0.13   11.2   1.5   371   410   174   213   123   215 0.88 AAA ATPase domain
AAA_22               PF13401.1    131 sp|P46342|PSTB1_BACSU -            260    0.0011   19.0   1.0   1   1     2e-05    0.0088   16.1   1.0     5    28    40    63    35   221 0.78 AAA domain
AAA_10               PF12846.2    304 sp|P46342|PSTB1_BACSU -            260    0.0026   17.2   0.0   1   1   1.2e-05    0.0052   16.2   0.0     3    31    41    70    39    95 0.85 AAA-like domain
Rad17                PF03215.10   519 sp|P46342|PSTB1_BACSU -            260    0.0029   16.3   0.0   1   1   1.3e-05    0.0057   15.3   0.0    37    66    31    60    25    89 0.80 Rad17 cell cycle checkpoint protein
Arch_ATPase          PF01637.13   234 sp|P46342|PSTB1_BACSU -            260    0.0039   16.9   1.5   1   1   0.00015     0.067   12.8   1.5     7    40    28    59    24   241 0.83 Archaeal ATPase
Septin               PF00735.13   281 sp|P46342|PSTB1_BACSU -            260    0.0088   15.0   0.1   1   1   2.9e-05     0.013   14.5   0.1     9    97    44   140    39   154 0.69 Septin
Adeno_IVa2           PF02456.10   370 sp|P46342|PSTB1_BACSU -            260     0.011   14.3   0.1   1   1     8e-05     0.035   12.7   0.1    59   109    11    61     3    70 0.71 Adenovirus IVa2 protein
AAA_25               PF13481.1    194 sp|P46342|PSTB1_BACSU -            260     0.013   14.9   0.0   1   1   7.5e-05     0.033   13.6   0.0    30    53    36    59    29    85 0.84 AAA domain
AAA_17               PF13207.1    121 sp|P46342|PSTB1_BACSU -            260     0.013   16.3   1.0   1   1   5.9e-05     0.026   15.3   1.0     3    19    43    59    41   205 0.85 AAA domain
AAA_33               PF13671.1    143 sp|P46342|PSTB1_BACSU -            260     0.017   14.9   0.0   1   1   8.1e-05     0.035   13.9   0.0     1    19    41    59    41    79 0.88 AAA domain
AAA_11               PF13086.1    236 sp|P46342|PSTB1_BACSU -            260     0.017   14.6   0.1   1   1   5.6e-05     0.025   14.1   0.1     7    95    29   217    24   253 0.67 AAA domain
RNA_helicase         PF00910.17   107 sp|P46342|PSTB1_BACSU -            260     0.018   15.2   0.0   1   1   0.00013     0.058   13.5   0.0     3    23    44    64    42    87 0.81 RNA helicase
AAA                  PF00004.24   132 sp|P46342|PSTB1_BACSU -            260     0.022   14.9   0.5   1   1   0.00073      0.32   11.2   0.5     3    38    44   117    42   220 0.64 ATPase family associated with various cellular activities (AAA)
AAA_30               PF13604.1    196 sp|P46342|PSTB1_BACSU -            260     0.023   14.2   0.0   1   1   0.00029      0.13   11.8   0.0     5    44    24    65    20    83 0.81 AAA domain
AAA_14               PF13173.1    128 sp|P46342|PSTB1_BACSU -            260     0.023   14.6   0.3   1   1   0.00019     0.084   12.7   0.1     2    22    39    59    38   120 0.84 AAA domain
SbcCD_C              PF13558.1     90 sp|P46342|PSTB1_BACSU -            260     0.026   14.4   0.1   1   1   0.00058      0.25   11.2   0.1    25    87   149   198   133   201 0.72 Putative exonuclease SbcCD, C subunit
PRK                  PF00485.13   194 sp|P46342|PSTB1_BACSU -            260     0.027   14.0   0.0   1   1   0.00011     0.048   13.2   0.0     2    26    42    66    41    99 0.75 Phosphoribulokinase / Uridine kinase family
G-alpha              PF00503.15   389 sp|P46342|PSTB1_BACSU -            260     0.031   12.9   0.0   1   1   7.6e-05     0.033   12.8   0.0    63   126    44   121    36   244 0.73 G-protein alpha subunit
Mg_chelatase         PF01078.16   207 sp|P46342|PSTB1_BACSU -            260     0.046   12.8   0.0   1   1   0.00035      0.15   11.1   0.0     6    46    23    63    19    88 0.85 Magnesium chelatase, subunit ChlI
AAA_28               PF13521.1    163 sp|P46342|PSTB1_BACSU -            260     0.057   13.3   0.0   1   1    0.0007      0.31   11.0   0.0     3    20    43    60    41    87 0.84 AAA domain
AAA_18               PF13238.1    129 sp|P46342|PSTB1_BACSU -            260     0.059   13.6   0.0   1   1   0.00028      0.12   12.6   0.0     2    23    43    86    43   150 0.69 AAA domain
PhoH                 PF02562.11   205 sp|P46342|PSTB1_BACSU -            260     0.086   12.0   0.0   1   1   0.00052      0.23   10.6   0.0     8    35    24    55    19    71 0.81 PhoH-like protein
NACHT                PF05729.7    166 sp|P46342|PSTB1_BACSU -            260      0.12   12.0   0.0   1   1   0.00057      0.25   10.9   0.0     2    21    41    60    40    68 0.86 NACHT domain
MMR_HSR1             PF01926.18   116 sp|P46342|PSTB1_BACSU -            260      0.16   11.9   1.2   1   1   0.00089      0.39   10.6   1.2     3    20    43    60    41   217 0.85 50S ribosome-binding GTPase
MobB                 PF03205.9    140 sp|P46342|PSTB1_BACSU -            260      0.16   11.6   1.0   1   1    0.0008      0.35   10.5   0.1     2    20    41    59    40    69 0.87 Molybdopterin guanine dinucleotide synthesis protein B
ABC_tran             PF00005.22   137 sp|P46341|PSTB2_BACSU -            269     6e-31  107.5   0.0   1   1   1.6e-33   8.7e-31  107.0   0.0     2   136    39   193    38   194 0.93 ABC transporter
AAA_21               PF13304.1    303 sp|P46341|PSTB2_BACSU -            269   3.1e-10   40.5   0.6   1   1     2e-11   1.1e-08   35.4   0.6     1   298    50   223    50   225 0.68 AAA domain
SMC_N                PF02463.14   220 sp|P46341|PSTB2_BACSU -            269   1.8e-08   33.9   0.1   1   2   0.00042      0.22   10.6   0.0    17    44    40    68    24    82 0.81 RecF/RecN/SMC N terminal domain
SMC_N                PF02463.14   220 sp|P46341|PSTB2_BACSU -            269   1.8e-08   33.9   0.1   2   2     2e-07   0.00011   21.5   0.0   122   202   154   227    83   243 0.79 RecF/RecN/SMC N terminal domain
AAA_22               PF13401.1    131 sp|P46341|PSTB2_BACSU -            269   9.5e-08   32.2   0.0   1   1   3.1e-10   1.6e-07   31.4   0.0     5   113    49   212    44   232 0.84 AAA domain
AAA_29               PF13555.1     62 sp|P46341|PSTB2_BACSU -            269   0.00013   21.3   0.0   1   1   4.7e-07   0.00025   20.5   0.0    12    40    38    65    29    71 0.80 P-loop containing region of AAA domain
DUF258               PF03193.11   161 sp|P46341|PSTB2_BACSU -            269   0.00018   20.7   0.0   1   1   5.8e-07   0.00031   19.9   0.0    14    58    26    71    16   103 0.85 Protein of unknown function, DUF258
Adeno_IVa2           PF02456.10   370 sp|P46341|PSTB2_BACSU -            269   0.00081   18.1   0.0   1   2   6.5e-06    0.0034   16.0   0.0    66   116    27    77    11    80 0.73 Adenovirus IVa2 protein
AAA_16               PF13191.1    185 sp|P46341|PSTB2_BACSU -            269    0.0019   18.2   0.1   1   1   1.1e-05    0.0061   16.5   0.1    27   160    51   193    36   248 0.65 AAA ATPase domain
AAA_17               PF13207.1    121 sp|P46341|PSTB2_BACSU -            269    0.0029   18.4   0.0   1   1     9e-06    0.0048   17.7   0.0     3    42    52   117    50   219 0.64 AAA domain
AAA_23               PF13476.1    202 sp|P46341|PSTB2_BACSU -            269    0.0054   17.0   0.0   1   1   3.1e-05     0.016   15.5   0.0    11    39    39    68    24    71 0.81 AAA domain
AAA_33               PF13671.1    143 sp|P46341|PSTB2_BACSU -            269    0.0071   16.2   0.0   1   1   2.5e-05     0.013   15.3   0.0     1    20    50    69    50   159 0.88 AAA domain
FtsK_SpoIIIE         PF01580.13   205 sp|P46341|PSTB2_BACSU -            269    0.0088   15.5   0.0   1   1     3e-05     0.016   14.7   0.0    19    58    29    68    15    70 0.87 FtsK/SpoIIIE family
AAA_10               PF12846.2    304 sp|P46341|PSTB2_BACSU -            269    0.0096   15.3   0.0   1   1     4e-05     0.021   14.2   0.0     1    23    48    70    48    80 0.86 AAA-like domain
AAA_14               PF13173.1    128 sp|P46341|PSTB2_BACSU -            269     0.011   15.6   0.0   1   1   6.2e-05     0.033   14.0   0.0     2    28    48    87    47   233 0.73 AAA domain
G-alpha              PF00503.15   389 sp|P46341|PSTB2_BACSU -            269     0.014   14.1   0.0   1   1   2.6e-05     0.014   14.1   0.0    50    82    39    72     2   239 0.84 G-protein alpha subunit
AAA_18               PF13238.1    129 sp|P46341|PSTB2_BACSU -            269     0.025   14.8   0.0   1   1   9.4e-05      0.05   13.9   0.0     3    23    53    95    52   158 0.68 AAA domain
Arch_ATPase          PF01637.13   234 sp|P46341|PSTB2_BACSU -            269     0.036   13.7   0.0   1   2   0.00045      0.24   11.0   0.0    18    40    46    68    35    79 0.84 Archaeal ATPase
NACHT                PF05729.7    166 sp|P46341|PSTB2_BACSU -            269     0.046   13.3   0.1   1   1   0.00027      0.14   11.7   0.0     3    20    51    68    49    71 0.89 NACHT domain
AAA_25               PF13481.1    194 sp|P46341|PSTB2_BACSU -            269     0.049   13.0   0.0   1   1   0.00022      0.12   11.7   0.0    30    50    45    65    33    69 0.84 AAA domain
AAA                  PF00004.24   132 sp|P46341|PSTB2_BACSU -            269      0.06   13.5   0.0   1   1     0.001      0.55   10.4   0.0     3    21    53    71    51   234 0.78 ATPase family associated with various cellular activities (AAA)
AAA_5                PF07728.9    139 sp|P46341|PSTB2_BACSU -            269     0.061   13.0   0.0   1   1     0.001      0.55    9.9   0.0     4    22    53    71    51    80 0.90 AAA domain (dynein-related subfamily)
NB-ARC               PF00931.17   287 sp|P46341|PSTB2_BACSU -            269     0.066   12.0   0.0   1   2   0.00048      0.25   10.1   0.0    17    43    46    72    35    78 0.81 NB-ARC domain
Rad17                PF03215.10   519 sp|P46341|PSTB2_BACSU -            269     0.071   11.7   0.0   1   1   0.00019     0.099   11.2   0.0    39    66    42    69    17    77 0.81 Rad17 cell cycle checkpoint protein
RNA_helicase         PF00910.17   107 sp|P46341|PSTB2_BACSU -            269       0.1   12.7   0.0   1   1   0.00055      0.29   11.3   0.0     3    21    53    70    51    86 0.81 RNA helicase
PBP_like_2           PF12849.2    281 sp|P46338|PSTS_BACSU -            300   2.7e-44  151.7   6.3   1   1   2.3e-47   5.7e-44  150.6   6.3     2   280    36   271    35   272 0.89 PBP superfamily domain
PBP_like             PF12727.2    193 sp|P46338|PSTS_BACSU -            300   3.6e-25   88.0   0.1   1   1   1.8e-28   4.6e-25   87.7   0.1     1   192    62   268    62   269 0.82 PBP superfamily domain
SBP_bac_11           PF13531.1    230 sp|P46338|PSTS_BACSU -            300   7.7e-11   42.0   1.2   1   1   2.2e-13   5.3e-10   39.3   1.2     1   229    46   283    46   284 0.69 Bacterial extracellular solute-binding protein
SBP_bac_1            PF01547.20   315 sp|P46338|PSTS_BACSU -            300   7.4e-10   39.0   9.5   1   1   4.7e-13   1.2e-09   38.4   9.5     8   314    52   274    44   275 0.78 Bacterial extracellular solute-binding protein
SBP_bac_8            PF13416.1    281 sp|P46338|PSTS_BACSU -            300   0.00014   21.7   4.3   2   2   6.5e-07    0.0016   18.2   0.1   213   265   233   288   199   296 0.74 Bacterial extracellular solute-binding protein
LysR_substrate       PF03466.15   209 sp|P46338|PSTS_BACSU -            300    0.0032   16.6   0.0   1   1     2e-06     0.005   15.9   0.0     4    85    42   123    39   271 0.82 LysR substrate binding domain
PEP-utilizers_C      PF02896.13   294 sp|P08838|PT1_BACSU  -            570  8.7e-127  422.0   0.1   1   1  5.3e-130  1.6e-126  421.1   0.0     1   292   250   540   250   542 0.99 PEP-utilising enzyme, TIM barrel domain
PEP-utilisers_N      PF05524.8    123 sp|P08838|PT1_BACSU  -            570   2.2e-38  130.7   2.2   1   1     9e-42   2.7e-38  130.5   0.5     1   123     4   127     4   127 0.99 PEP-utilising enzyme, N-terminal
PEP-utilizers        PF00391.18    81 sp|P08838|PT1_BACSU  -            570   4.8e-26   90.1   0.6   1   1   4.7e-29   1.4e-25   88.6   0.6    10    81   153   225   147   225 0.95 PEP-utilising enzyme, mobile domain
UAE_UbL              PF14732.1     87 sp|P08838|PT1_BACSU  -            570     0.049   13.7   0.2   1   2    0.0001      0.31   11.1   0.1    24    63    20    72    15    76 0.91 Ubiquitin/SUMO-activating enzyme ubiquitin-like domain
Tox-PLDMTX           PF15645.1    135 sp|P08838|PT1_BACSU  -            570     0.087   12.8   0.0   1   1   6.9e-05      0.21   11.6   0.0    43    95   213   265   201   290 0.81 Dermonecrotoxin of the Papain-like fold
PTA_PTB              PF01515.14   319 sp|P39646|PTAS_BACSU -            323  3.4e-133  443.6   1.3   1   1  7.7e-137  3.8e-133  443.4   1.3     4   319     6   319     3   319 0.99 Phosphate acetyl/butaryl transferase
FA_synthesis         PF02504.10   323 sp|P39646|PTAS_BACSU -            323     0.016   14.1   0.9   1   1   8.5e-06     0.042   12.7   0.9    17   198    29   221    22   230 0.66 Fatty acid synthesis protein
FrhB_FdhB_N          PF04422.8     82 sp|P39646|PTAS_BACSU -            323     0.092   12.6   0.1   2   2   0.00014      0.68    9.8   0.0    24    68   110   151   109   153 0.86 Coenzyme F420 hydrogenase/dehydrogenase, beta subunit N-term
PTA_PTB              PF01515.14   319 sp|P54530|PTB_BACSU  -            299   6.3e-78  262.0  15.0   1   2   9.2e-11   6.8e-07   28.6   0.3     2    52     3    53     2    58 0.91 Phosphate acetyl/butaryl transferase
PTA_PTB              PF01515.14   319 sp|P54530|PTB_BACSU  -            299   6.3e-78  262.0  15.0   2   2   1.7e-74   1.3e-70  238.0   9.9    80   319    52   291    48   291 0.96 Phosphate acetyl/butaryl transferase
DegV                 PF02645.11   280 sp|P54530|PTB_BACSU  -            299      0.06   12.4   2.3   3   3   6.9e-05      0.51    9.3   0.0   127   174   156   203   135   206 0.95 Uncharacterised protein, DegV family COG1307
PTS-HPr              PF00381.14    84 sp|P08877|PTHP_BACSU -             88     9e-32  108.8   0.3   1   1   6.7e-36   9.9e-32  108.6   0.3     1    83     1    83     1    84 0.98 PTS HPr component phosphorylation site
Pept_tRNA_hydro      PF01195.14   184 sp|P37470|PTH_BACSU  -            188   2.6e-70  235.6   0.0   1   1     4e-74   2.9e-70  235.4   0.0     1   184     3   185     3   185 0.99 Peptidyl-tRNA hydrolase
Phage_Mu_Gam         PF07352.7    149 sp|P37470|PTH_BACSU  -            188    0.0046   16.4   0.0   1   2     3e-06     0.022   14.2   0.0    56   107    76   128    72   143 0.91 Bacteriophage Mu Gam like protein
Aminotran_5          PF00266.14   371 sp|O32148|PUCG_BACSU -            416   1.2e-32  113.0   0.0   1   1   1.2e-35   5.8e-32  110.8   0.0    36   342    37   359    24   376 0.88 Aminotransferase class-V
Pyridoxal_deC        PF00282.14   373 sp|O32148|PUCG_BACSU -            416     0.059   11.8   0.2   2   2   0.00011      0.54    8.6   0.1   180   232   124   174    99   198 0.77 Pyridoxal-dependent decarboxylase conserved domain
DUF3534              PF12053.3    145 sp|O32148|PUCG_BACSU -            416     0.065   13.1   0.0   1   1   2.6e-05      0.13   12.1   0.0    42    81   106   145    99   155 0.86 Domain of unknown function (DUF3534)
Xan_ur_permease      PF00860.15   389 sp|O32139|PUCJ_BACSU -            449  3.8e-127  423.9  42.7   1   1    6e-131  4.4e-127  423.7  42.7     2   387     7   389     6   391 0.98 Permease family
Xan_ur_permease      PF00860.15   389 sp|O32140|PUCK_BACSU -            430  2.9e-126  421.0  44.1   1   1  2.5e-130  3.6e-126  420.7  44.1     2   388     9   387     8   388 0.99 Permease family
OHCU_decarbox        PF09349.5    159 sp|O32141|PUCL_BACSU -            494   1.5e-45  155.3   0.8   1   1   3.1e-49   1.5e-45  155.3   0.8     1   159     7   161     7   161 0.98 OHCU decarboxylase
Uricase              PF01014.13   138 sp|O32141|PUCL_BACSU -            494   7.1e-37  126.5   0.0   1   2   2.4e-16   1.2e-12   48.1   0.0     2   113   175   293   174   314 0.90 Uricase
Uricase              PF01014.13   138 sp|O32141|PUCL_BACSU -            494   7.1e-37  126.5   0.0   2   2   4.1e-25     2e-21   76.5   0.0     3   136   333   469   331   471 0.94 Uricase
Polyoma_coat2        PF00761.15   322 sp|O32141|PUCL_BACSU -            494      0.11   11.9   0.0   1   1   3.9e-05      0.19   11.1   0.0   176   259     3    87     1   103 0.72 Polyomavirus coat protein
PucR                 PF07905.6    123 sp|O32138|PUCR_BACSU -            531   9.4e-37  125.3   0.1   1   1   7.6e-40   2.8e-36  123.7   0.0     2   122     5   124     4   125 0.97 Purine catabolism regulatory protein-like family
HTH_30               PF13556.1     59 sp|O32138|PUCR_BACSU -            531   2.7e-24   84.5   1.3   1   1   1.7e-27   6.3e-24   83.3   1.3     1    58   468   525   468   526 0.98 PucR C-terminal helix-turn-helix domain
CENP-L               PF13092.1    162 sp|O32138|PUCR_BACSU -            531     0.005   16.6   0.6   1   1   3.9e-06     0.015   15.1   0.6    18   132   368   483   361   499 0.73 Kinetochore complex Sim4 subunit Fta1
HTH_1                PF00126.22    60 sp|O32138|PUCR_BACSU -            531     0.023   14.4   0.0   1   1   1.3e-05      0.05   13.3   0.0     6    50   471   516   467   524 0.79 Bacterial regulatory helix-turn-helix protein, lysR family
Alpha-amylase        PF00128.19   316 sp|C0SPA0|PULA_BACSU -            718   1.8e-21   76.8   0.0   1   2   4.9e-12   2.4e-08   33.7   0.0     5    81   252   345   250   362 0.81 Alpha amylase, catalytic domain
Alpha-amylase        PF00128.19   316 sp|C0SPA0|PULA_BACSU -            718   1.8e-21   76.8   0.0   2   2   1.3e-13   6.5e-10   38.8   0.0   138   311   375   574   368   583 0.67 Alpha amylase, catalytic domain
CBM_48               PF02922.13    85 sp|C0SPA0|PULA_BACSU -            718   9.2e-16   57.6   0.5   1   1   4.3e-19   2.1e-15   56.5   0.1     2    85   106   182   105   182 0.95 Carbohydrate-binding module 48 (Isoamylase N-terminal domain)
DUF3372              PF11852.3    168 sp|C0SPA0|PULA_BACSU -            718     0.076   12.1   0.0   1   1     3e-05      0.15   11.1   0.0    42    74   601   633   589   680 0.74 Domain of unknown function (DUF3372)
PNP_UDP_1            PF01048.15   234 sp|P46354|PUNA_BACSU -            271   1.5e-55  187.7   0.4   1   1   1.2e-59   1.7e-55  187.5   0.4     1   234    21   268    21   268 0.96 Phosphorylase superfamily
GATase_2             PF00310.16   361 sp|P00497|PUR1_BACSU -            476   2.6e-26   92.2   0.1   1   2   1.6e-07   0.00047   18.9   0.0     1    53    12    53    12    69 0.87 Glutamine amidotransferases class-II
GATase_2             PF00310.16   361 sp|P00497|PUR1_BACSU -            476   2.6e-26   92.2   0.1   2   2   2.2e-22   6.6e-19   67.8   0.0   182   360    62   205    58   206 0.92 Glutamine amidotransferases class-II
GATase_6             PF13522.1    133 sp|P00497|PUR1_BACSU -            476   1.1e-23   83.6   0.0   1   1   6.3e-27   1.9e-23   82.9   0.0     4   133    67   205    64   205 0.90 Glutamine amidotransferase domain
GATase_7             PF13537.1    125 sp|P00497|PUR1_BACSU -            476   5.9e-22   77.7   0.0   1   1   3.2e-25   9.6e-22   77.0   0.0    11   123    93   209    81   211 0.92 Glutamine amidotransferase domain
Pribosyltran         PF00156.22   125 sp|P00497|PUR1_BACSU -            476   2.5e-14   53.0   0.7   1   1   1.5e-17   4.5e-14   52.2   0.7     9   121   269   382   264   385 0.92 Phosphoribosyl transferase domain
GATase_4             PF13230.1    272 sp|P00497|PUR1_BACSU -            476   6.3e-06   25.0   0.0   1   1   3.7e-09   1.1e-05   24.2   0.0    68   126    72   130    40   154 0.81 Glutamine amidotransferases class-II
GARS_A               PF01071.14   194 sp|P12039|PUR2_BACSU -            422   5.4e-86  287.1   1.0   1   1   6.5e-89     8e-86  286.5   1.0     1   194   101   293   101   293 1.00 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain
GARS_N               PF02844.10   100 sp|P12039|PUR2_BACSU -            422   1.7e-37  127.8   1.2   1   1   2.6e-40   3.2e-37  127.0   0.4     1   100     1   100     1   100 0.99 Phosphoribosylglycinamide synthetase, N domain
GARS_C               PF02843.11    93 sp|P12039|PUR2_BACSU -            422   3.9e-30  103.8   0.1   1   1     9e-33   1.1e-29  102.4   0.1     1    93   325   417   325   417 0.98 Phosphoribosylglycinamide synthetase, C domain
ATP-grasp_4          PF13535.1    184 sp|P12039|PUR2_BACSU -            422   1.7e-18   66.9   0.1   1   1   2.7e-21   3.3e-18   66.0   0.1     5   180   103   289   101   291 0.81 ATP-grasp domain
ATPgrasp_Ter         PF15632.1    330 sp|P12039|PUR2_BACSU -            422   3.6e-09   35.8   0.1   1   1   6.2e-12   7.6e-09   34.7   0.1    58   223    54   205    39   211 0.84 ATP-grasp in the biosynthetic pathway with Ter operon
ATP-grasp_3          PF02655.9    161 sp|P12039|PUR2_BACSU -            422   3.4e-08   33.4   0.0   1   1   5.3e-11   6.5e-08   32.5   0.0     8   159   106   289   102   291 0.73 ATP-grasp domain
CPSase_L_D2          PF02786.12   211 sp|P12039|PUR2_BACSU -            422   2.4e-07   30.2   0.2   1   1     3e-10   3.7e-07   29.6   0.2     2    91   103   190   102   288 0.92 Carbamoyl-phosphate synthase L chain, ATP binding domain
ATP-grasp            PF02222.17   172 sp|P12039|PUR2_BACSU -            422     1e-05   24.9   0.1   1   1   1.3e-08   1.6e-05   24.3   0.1     2    88   111   201   109   261 0.85 ATP-grasp domain
Dala_Dala_lig_C      PF07478.8    203 sp|P12039|PUR2_BACSU -            422    0.0005   19.5   0.1   1   1     6e-07   0.00075   18.9   0.1     1   150   109   259   109   285 0.75 D-ala D-ala ligase C-terminus
ATP-grasp_2          PF08442.5    202 sp|P12039|PUR2_BACSU -            422   0.00055   19.3   0.0   1   1   8.2e-07     0.001   18.5   0.0     7    77   106   171   103   192 0.87 ATP-grasp domain
ATP-grasp_5          PF13549.1    222 sp|P12039|PUR2_BACSU -            422    0.0029   16.8   0.1   1   1   9.4e-06     0.012   14.8   0.0    15    53   106   144   102   176 0.94 ATP-grasp domain
RimK                 PF08443.6    190 sp|P12039|PUR2_BACSU -            422    0.0084   15.5   0.1   1   1   1.5e-05     0.019   14.4   0.0     4   138   103   246   100   296 0.69 RimK-like ATP-grasp domain
Formyl_trans_N       PF00551.14   181 sp|P12040|PUR3_BACSU -            195   1.6e-65  220.0   0.0   1   1   1.2e-69   1.8e-65  219.9   0.0     1   181     2   182     2   182 0.99 Formyl transferase
AIRS_C               PF02769.17   153 sp|P12043|PUR5_BACSU -            346   2.5e-35  121.7   0.0   1   1   5.5e-39     4e-35  121.0   0.0     1   149   173   339   173   342 0.97 AIR synthase related protein, C-terminal domain
AIRS                 PF00586.19    96 sp|P12043|PUR5_BACSU -            346   1.1e-20   73.6   0.2   1   2   9.2e-24   6.8e-20   71.1   0.2     3    96    41   139    37   139 0.91 AIR synthase related protein, N-terminal domain
SAICAR_synt          PF01259.13   249 sp|P12046|PUR7_BACSU -            241   1.2e-82  276.7   0.3   1   1   9.5e-87   1.4e-82  276.5   0.3     2   246     6   236     5   239 0.98 SAICAR synthetase
Lyase_1              PF00206.15   312 sp|P12047|PUR8_BACSU -            431     1e-83  281.1   0.0   1   1     2e-87   1.5e-83  280.5   0.0     7   312     7   286     3   286 0.98 Lyase
ADSL_C               PF10397.4     81 sp|P12047|PUR8_BACSU -            431   1.2e-28   98.8   0.0   1   1   5.1e-32   3.7e-28   97.3   0.0     2    80   350   428   349   429 0.98 Adenylosuccinate lyase C-terminus
AICARFT_IMPCHas      PF01808.13   315 sp|P12048|PUR9_BACSU -            512  6.9e-142  472.1   4.3   1   1  3.1e-145  9.1e-142  471.7   4.3     1   314   135   446   135   447 0.99 AICARFT/IMPCHase bienzyme
MGS                  PF02142.17    95 sp|P12048|PUR9_BACSU -            512   6.2e-29   99.7   0.1   1   1   5.6e-32   1.7e-28   98.4   0.1     2    94    16   129    15   130 0.99 MGS-like domain
Adenylsucc_synt      PF00709.16   421 sp|P29726|PURA_BACSU -            430  7.1e-175  581.6   0.0   1   1  1.1e-178    8e-175  581.5   0.0     2   419     4   420     3   422 0.99 Adenylosuccinate synthetase
DUF664               PF04978.7    150 sp|P29726|PURA_BACSU -            430     0.034   14.3   0.0   2   2   3.2e-05      0.24   11.6   0.0     2    66   207   284   206   328 0.87 Protein of unknown function (DUF664)
AIRC                 PF00731.15   150 sp|P12044|PURE_BACSU -            162   2.5e-70  234.5   0.3   1   1   1.9e-74   2.8e-70  234.4   0.3     1   150     3   154     3   154 0.98 AIR carboxylase
ATP-grasp            PF02222.17   172 sp|P12045|PURK_BACSU -            380   1.8e-64  216.2   0.0   1   1   2.7e-67   2.7e-64  215.6   0.0     2   172   116   285   115   285 0.99 ATP-grasp domain
ATP-grasp_4          PF13535.1    184 sp|P12045|PURK_BACSU -            380   6.2e-13   48.8   0.1   1   1     1e-15     1e-12   48.1   0.1     8   179   111   274   105   280 0.83 ATP-grasp domain
Dala_Dala_lig_C      PF07478.8    203 sp|P12045|PURK_BACSU -            380   1.1e-07   31.4   0.4   1   1   4.3e-10   4.2e-07   29.5   0.1     3   175   116   274   114   279 0.80 D-ala D-ala ligase C-terminus
2-Hacid_dh_C         PF02826.14   178 sp|P12045|PURK_BACSU -            380     3e-05   23.2   0.1   1   1   9.4e-08   9.3e-05   21.6   0.0    36    97     9    76     4    95 0.80 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain
NAD_binding_2        PF03446.10   163 sp|P12045|PURK_BACSU -            380   3.5e-05   23.6   0.1   1   1   9.9e-08   9.8e-05   22.2   0.1     4    59    12    72    10    80 0.88 NAD binding domain of 6-phosphogluconate dehydrogenase
ATPgrasp_Ter         PF15632.1    330 sp|P12045|PURK_BACSU -            380   9.9e-05   21.2   0.1   1   2     1e-05      0.01   14.5   0.0   112   172   112   169    94   184 0.82 ATP-grasp in the biosynthetic pathway with Ter operon
Pyr_redox            PF00070.22    80 sp|P12045|PURK_BACSU -            380     0.003   17.9   0.1   1   2   0.00011      0.11   12.8   0.1     3    44    13    56    11    85 0.82 Pyridine nucleotide-disulphide oxidoreductase
XdhC_C               PF13478.1    136 sp|P12045|PURK_BACSU -            380    0.0041   17.4   0.0   1   1   9.8e-06    0.0097   16.2   0.0     3    77    14    90    12   126 0.72 XdhC Rossmann domain
3HCDH_N              PF02737.13   180 sp|P12045|PURK_BACSU -            380    0.0046   16.6   0.3   1   1   1.7e-05     0.017   14.8   0.1     2    34    12    44    11    79 0.79 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain
Pyr_redox_2          PF07992.9    201 sp|P12045|PURK_BACSU -            380     0.044   13.6   0.0   1   1   9.1e-05      0.09   12.6   0.0     4    36    14    46    12   141 0.68 Pyridine nucleotide-disulphide oxidoreductase
DAO                  PF01266.19   358 sp|P12045|PURK_BACSU -            380     0.098   11.5   0.1   1   1   0.00017      0.17   10.7   0.1     4    35    14    46    12    70 0.90 FAD dependent oxidoreductase
HI0933_like          PF03486.9    409 sp|P12045|PURK_BACSU -            380       0.1   11.0   0.7   1   1   0.00016      0.16   10.3   0.7     5    31    14    40    10    45 0.91 HI0933-like protein
S_layer_N            PF05123.7    290 sp|P12045|PURK_BACSU -            380       0.1   12.1   0.3   2   2   0.00079      0.79    9.3   0.0   233   272   303   346   287   356 0.84 S-layer like family, N-terminal region
VirE_N               PF08800.5    136 sp|P12045|PURK_BACSU -            380      0.13   12.0   0.0   1   1   0.00041      0.41   10.4   0.0     9    53    49    93    44   119 0.87 VirE N-terminal domain
AIRS                 PF00586.19    96 sp|P12042|PURL_BACSU -            742   5.1e-46  154.8   4.6   1   2   5.4e-28     4e-24   84.6   0.2     2    96    80   174    79   174 0.92 AIR synthase related protein, N-terminal domain
AIRS                 PF00586.19    96 sp|P12042|PURL_BACSU -            742   5.1e-46  154.8   4.6   2   2   6.3e-24   4.7e-20   71.6   0.1     1    96   443   539   443   539 0.94 AIR synthase related protein, N-terminal domain
AIRS_C               PF02769.17   153 sp|P12042|PURL_BACSU -            742   4.7e-45  153.3   9.3   1   2   7.8e-32   5.8e-28   97.8   1.0     2   150   207   359   206   362 0.95 AIR synthase related protein, C-terminal domain
AIRS_C               PF02769.17   153 sp|P12042|PURL_BACSU -            742   4.7e-45  153.3   9.3   2   2   3.6e-20   2.7e-16   59.9   1.8     1   147   575   707   575   712 0.90 AIR synthase related protein, C-terminal domain
PuR_N                PF09182.5     70 sp|P37551|PURR_BACSU -            285     8e-34  115.0   0.0   1   1   2.5e-37   1.8e-33  113.9   0.0     1    70     4    73     4    73 0.99 Bacterial purine repressor, N-terminal
Pribosyltran         PF00156.22   125 sp|P37551|PURR_BACSU -            285   1.4e-18   66.8   0.5   1   1   2.8e-22   2.1e-18   66.2   0.5     4   125   109   233   106   233 0.92 Phosphoribosyl transferase domain
PurS                 PF02700.9     80 sp|P12049|PURS_BACSU -             84   2.8e-35  120.1   1.0   1   1   4.2e-39   3.1e-35  119.9   1.0     1    80     2    80     2    80 0.98 Phosphoribosylformylglycinamidine (FGAM) synthase
DUF3333              PF11812.3    155 sp|P12049|PURS_BACSU -             84     0.009   16.0   0.1   1   1   1.3e-06    0.0099   15.8   0.1    49   122     3    74     1    82 0.85 Domain of unknown function (DUF3333)
ATP-grasp            PF02222.17   172 sp|P39771|PURT_BACSU -            384   9.5e-59  197.6   0.0   1   1   1.6e-61   1.6e-58  196.8   0.0     2   171   115   286   114   287 0.98 ATP-grasp domain
ATP-grasp_4          PF13535.1    184 sp|P39771|PURT_BACSU -            384   1.4e-20   73.8   0.1   1   1   4.6e-23   4.5e-20   72.1   0.0    10   179   112   276   102   280 0.85 ATP-grasp domain
CPSase_L_D2          PF02786.12   211 sp|P39771|PURT_BACSU -            384   6.2e-11   41.9   0.0   1   1   1.1e-13   1.1e-10   41.1   0.0    19   179   123   275   105   286 0.83 Carbamoyl-phosphate synthase L chain, ATP binding domain
Dala_Dala_lig_C      PF07478.8    203 sp|P39771|PURT_BACSU -            384   2.7e-09   36.7   0.0   1   1   2.2e-11   2.2e-08   33.7   0.0    19   175   131   276   113   288 0.75 D-ala D-ala ligase C-terminus
RimK                 PF08443.6    190 sp|P39771|PURT_BACSU -            384   4.2e-09   36.1   0.0   1   1   7.5e-12   7.4e-09   35.3   0.0    23   173   126   280   108   292 0.81 RimK-like ATP-grasp domain
CPSase_L_chain       PF00289.17   110 sp|P39771|PURT_BACSU -            384   2.8e-08   33.8   0.2   1   2   3.8e-10   3.8e-07   30.1   0.0     2   103     4    94     3   100 0.88 Carbamoyl-phosphate synthase L chain, N-terminal domain
ATPgrasp_Ter         PF15632.1    330 sp|P39771|PURT_BACSU -            384   1.6e-07   30.4   0.0   1   2   2.6e-09   2.6e-06   26.4   0.0    23   171    27   166     7   187 0.82 ATP-grasp in the biosynthetic pathway with Ter operon
ATP-grasp_3          PF02655.9    161 sp|P39771|PURT_BACSU -            384   1.1e-05   25.3   0.0   1   1   2.3e-08   2.3e-05   24.3   0.0    27   159   137   277   119   279 0.80 ATP-grasp domain
GARS_A               PF01071.14   194 sp|P39771|PURT_BACSU -            384   0.00059   19.4   0.0   1   1     2e-06     0.002   17.7   0.0    12    99   116   201   109   222 0.83 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain
2-Hacid_dh_C         PF02826.14   178 sp|P39771|PURT_BACSU -            384    0.0054   15.8   0.0   1   1     1e-05      0.01   15.0   0.0    35    77     3    45     1    59 0.80 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain
RmlD_sub_bind        PF04321.12   287 sp|P39771|PURT_BACSU -            384    0.0079   15.1   0.1   1   1   1.3e-05     0.013   14.3   0.1     3    56     7    72     5   101 0.89 RmlD substrate binding domain
GARS_N               PF02844.10   100 sp|P39771|PURT_BACSU -            384      0.02   15.3   0.1   1   1     5e-05      0.05   14.0   0.1     2    99     6   102     5   103 0.79 Phosphoribosylglycinamide synthetase, N domain
Oxidored_nitro       PF00148.14   398 sp|P39771|PURT_BACSU -            384      0.08   11.5   0.1   1   1   0.00017      0.16   10.5   0.1   270   346     3    72     1    91 0.84 Nitrogenase component 1 type Oxidoreductase
Epimerase            PF01370.16   236 sp|P39771|PURT_BACSU -            384      0.11   11.9   0.0   1   1   0.00019      0.19   11.1   0.0     6    73    11    75     7    91 0.76 NAD dependent epimerase/dehydratase family
ATPgrasp_TupA        PF14305.1    239 sp|P39771|PURT_BACSU -            384      0.12   11.6   0.0   1   1   0.00043      0.43    9.8   0.0   178   220   233   278   218   283 0.91 TupA-like ATPgrasp
Formyl_trans_N       PF00551.14   181 sp|O34990|PURU_BACSU -            300     6e-43  146.4   0.1   1   1   1.8e-46   8.9e-43  145.9   0.1     1   181   104   281   104   281 0.95 Formyl transferase
ACT                  PF01842.20    66 sp|O34990|PURU_BACSU -            300   1.1e-10   40.7   0.1   1   3   2.5e-13   1.2e-09   37.4   0.0     2    64    21    83    20    85 0.90 ACT domain
ACT_6                PF13740.1     76 sp|O34990|PURU_BACSU -            300   2.1e-06   27.3   0.0   1   2   1.3e-09   6.3e-06   25.8   0.0     8    72    25    94    22    98 0.90 ACT domain
OTCace_N             PF02729.16   142 sp|P05654|PYRB_BACSU -            304   2.9e-46  156.6   0.5   1   2     2e-49     1e-45  154.9   0.0     1   142     2   141     2   141 0.98 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain
OTCace               PF00185.19   158 sp|P05654|PYRB_BACSU -            304   4.2e-36  124.1   0.0   2   2   2.3e-39   1.1e-35  122.8   0.1     1   156   146   286   146   288 0.91 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain
2-Hacid_dh_C         PF02826.14   178 sp|P05654|PYRB_BACSU -            304   0.00015   20.9   0.1   1   1     1e-07   0.00051   19.2   0.0    36   108   147   220   139   250 0.81 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain
Amidohydro_1         PF01979.15   333 sp|P25995|PYRC_BACSU -            428     4e-55  187.7   0.8   1   1   1.6e-58   4.7e-55  187.5   0.8     2   333    51   380    50   380 0.98 Amidohydrolase family
DHOase               PF12890.2    142 sp|P25995|PYRC_BACSU -            428   7.6e-43  145.6   0.1   1   1   3.9e-46   1.2e-42  144.9   0.1     3   142    50   237    48   237 0.98 Dihydro-orotase-like
Amidohydro_4         PF13147.1    304 sp|P25995|PYRC_BACSU -            428   2.2e-34  119.7   0.2   1   1     9e-38   2.7e-34  119.4   0.2     1   304    45   377    45   377 0.88 Amidohydrolase
Amidohydro_5         PF13594.1     68 sp|P25995|PYRC_BACSU -            428   3.7e-16   58.7   1.7   1   1   3.4e-19     1e-15   57.2   0.8     1    68    22    88    22    88 0.74 Amidohydrolase
Amidohydro_3         PF07969.6    404 sp|P25995|PYRC_BACSU -            428    0.0014   17.9   6.0   3   3   2.7e-05     0.081   12.1   0.0   362   403   338   377   300   378 0.84 Amidohydrolase family
DHO_dh               PF01180.16   295 sp|P25996|PYRDB_BACSU -            311  6.8e-104  346.9   0.2   1   1  5.7e-107  7.7e-104  346.7   0.2     1   295     1   284     1   284 0.98 Dihydroorotate dehydrogenase
Dus                  PF01207.12   310 sp|P25996|PYRDB_BACSU -            311   5.6e-11   41.8   0.3   1   1     6e-13   8.1e-10   38.0   0.3    51   224    89   274    77   286 0.84 Dihydrouridine synthase (Dus)
His_biosynth         PF00977.16   229 sp|P25996|PYRDB_BACSU -            311   1.1e-06   28.1   0.0   2   2   5.2e-09   7.1e-06   25.4   0.0    59   121   220   282   214   303 0.91 Histidine biosynthesis protein
NMO                  PF03060.10   330 sp|P25996|PYRDB_BACSU -            311   1.7e-05   24.1   5.8   1   1   4.3e-08   5.8e-05   22.3   5.8   167   221   210   265    58   269 0.86 Nitronate monooxygenase
PcrB                 PF01884.12   231 sp|P25996|PYRDB_BACSU -            311   0.00089   18.5   0.3   2   2   1.7e-05     0.023   13.9   0.0   167   213   219   265   212   278 0.85 PcrB family
DUF561               PF04481.7    243 sp|P25996|PYRDB_BACSU -            311    0.0013   17.7   0.3   2   2   1.1e-05     0.015   14.2   0.1   174   216   222   265   212   281 0.85 Protein of unknown function (DUF561)
FMN_dh               PF01070.13   357 sp|P25996|PYRDB_BACSU -            311    0.0051   15.7   0.4   1   1   7.6e-06      0.01   14.7   0.4   264   310   220   264   217   269 0.93 FMN-dependent dehydrogenase
IMPDH                PF00478.20   352 sp|P25996|PYRDB_BACSU -            311    0.0063   15.4   3.0   1   1   8.8e-06     0.012   14.5   3.0   198   241   221   264   136   267 0.85 IMP dehydrogenase / GMP reductase domain
TMP-TENI             PF02581.12   180 sp|P25996|PYRDB_BACSU -            311     0.021   13.9   3.5   2   2   1.8e-05     0.024   13.7   0.5   134   177   219   263   214   265 0.87 Thiamine monophosphate synthase/TENI
G3P_antiterm         PF04309.7    175 sp|P25996|PYRDB_BACSU -            311     0.039   13.0   0.3   1   1   7.6e-05       0.1   11.6   0.1   127   168   221   262   216   269 0.85 Glycerol-3-phosphate responsive antiterminator
Glu_synthase         PF01645.12   368 sp|P25996|PYRDB_BACSU -            311     0.089   11.6   2.5   1   1   0.00011      0.14   11.0   2.5   190   308   145   268   100   275 0.79 Conserved region in glutamate synthase
Pribosyltran         PF00156.22   125 sp|P25972|PYRE_BACSU -            216   3.1e-16   59.2   0.0   1   1   7.6e-20   5.6e-16   58.3   0.0     4   124    47   155    44   156 0.90 Phosphoribosyl transferase domain
PsbJ                 PF01788.12    40 sp|P25972|PYRE_BACSU -            216      0.17   11.4   0.3   1   1   4.4e-05      0.33   10.5   0.3    16    31   144   159   142   160 0.93 PsbJ
OMPdecase            PF00215.19   226 sp|P25971|PYRF_BACSU -            239   2.1e-50  171.2   0.1   1   1   1.6e-54   2.4e-50  171.0   0.1     4   225     7   229     4   230 0.96 Orotidine 5'-phosphate decarboxylase / HUMPS family
CTP_synth_N          PF06418.9    276 sp|P13242|PYRG_BACSU -            535  1.8e-136  453.6   0.5   1   1  8.3e-140  2.5e-136  453.2   0.5     1   276     2   277     2   277 0.99 CTP synthase N-terminus
GATase               PF00117.23   192 sp|P13242|PYRG_BACSU -            535   5.3e-55  185.8   0.0   1   1     3e-58   8.9e-55  185.1   0.0     2   191   302   526   301   527 0.92 Glutamine amidotransferase class-I
Peptidase_C26        PF07722.8    217 sp|P13242|PYRG_BACSU -            535   2.7e-07   30.2   0.4   2   2   6.9e-10     2e-06   27.3   0.1    99   217   367   509   355   509 0.77 Peptidase C26
CbiA                 PF01656.18   195 sp|P13242|PYRG_BACSU -            535   3.2e-05   23.4   0.0   1   1   2.2e-08   6.4e-05   22.4   0.0     8   109    13   149     6   217 0.76 CobQ/CobB/MinD/ParA nucleotide binding domain
GerPC                PF10737.4    176 sp|P13242|PYRG_BACSU -            535    0.0054   16.5   0.0   1   1   5.1e-06     0.015   15.0   0.0    22    89   408   474   400   479 0.77 Spore germination protein GerPC
AA_kinase            PF00696.23   242 sp|O31749|PYRH_BACSU -            240   7.9e-28   97.6   2.4   1   1     9e-32   1.3e-27   96.8   2.4     1   242     7   217     7   217 0.85 Amino acid kinase family
DHODB_Fe-S_bind      PF10418.4     40 sp|P25983|PYRK_BACSU -            256   3.4e-17   61.6   4.3   1   1   1.3e-20   6.6e-17   60.7   4.3     1    39   215   254   215   255 0.96 Iron-sulfur cluster binding domain of dihydroorotate dehydrogenase B
NAD_binding_1        PF00175.16   109 sp|P25983|PYRK_BACSU -            256   1.2e-16   61.2   0.0   1   1   3.8e-20   1.9e-16   60.5   0.0     1   108   112   202   112   203 0.94 Oxidoreductase NAD-binding domain
FAD_binding_6        PF00970.19    99 sp|P25983|PYRK_BACSU -            256   7.3e-05   22.8   0.0   1   1   2.7e-08   0.00014   21.9   0.0    12    96    16    97     5   100 0.83 Oxidoreductase FAD-binding domain
Xan_ur_permease      PF00860.15   389 sp|P39766|PYRP_BACSU -            435  1.6e-118  395.5  46.6   1   1  1.4e-122  2.1e-118  395.2  46.6     2   387    18   394    17   396 0.96 Permease family
Pribosyltran         PF00156.22   125 sp|P39765|PYRR_BACSU -            181   1.2e-16   60.5   1.4   1   1   4.6e-20   1.7e-16   60.0   1.4     3   125     6   136     4   136 0.88 Phosphoribosyl transferase domain
UPRTase              PF14681.1    207 sp|P39765|PYRR_BACSU -            181   0.00045   19.4   0.0   1   1   1.9e-07   0.00071   18.8   0.0   104   157    81   133    47   142 0.81 Uracil phosphoribosyltransferase
PRTase_2             PF15609.1    191 sp|P39765|PYRR_BACSU -            181    0.0018   17.5   0.1   2   2   9.7e-07    0.0036   16.6   0.0   120   165    97   142    79   166 0.82 Phosphoribosyl transferase
DUF1445              PF07286.7    143 sp|P39765|PYRR_BACSU -            181      0.11   12.1   0.0   1   1   5.3e-05       0.2   11.3   0.0    58   111    40    94    18   107 0.86 Protein of unknown function (DUF1445)
Cytochrom_B_N_2      PF13631.1    168 sp|P46912|QCRB_BACSU -            224   1.2e-37  129.3   9.6   2   2   3.1e-41   1.2e-37  129.3   9.6     2   123   100   223    99   224 0.96 Cytochrome b(N-terminal)/b6/petB
Cytochrom_B_N        PF00033.14   188 sp|P46912|QCRB_BACSU -            224   1.1e-07   31.3  24.6   1   1   1.4e-10   5.2e-07   29.1  24.6     3   174    36   218    34   222 0.88 Cytochrome b(N-terminal)/b6/petB
Ni_hydr_CYTB         PF01292.15   182 sp|P46912|QCRB_BACSU -            224   2.4e-06   27.0   5.1   1   2   6.5e-10   2.4e-06   27.0   5.1    96   177    29   125    15   129 0.80 Prokaryotic cytochrome b561
Ferric_reduct        PF01794.14   125 sp|P46912|QCRB_BACSU -            224     0.058   13.4   9.5   1   1   4.4e-05      0.16   12.0   8.9    26   124    82   206    44   207 0.76 Ferric reductase like transmembrane component
Cytochrome_CBB3      PF13442.1     67 sp|P46913|QCRC_BACSU -            255   2.4e-15   56.4   0.0   1   1   1.7e-18   4.1e-15   55.6   0.0     3    67   180   249   178   249 0.94 Cytochrome C oxidase, cbb3-type, subunit III
Cytochrom_B_C        PF00032.12   102 sp|P46913|QCRC_BACSU -            255   8.2e-06   25.9   2.8   2   2     4e-09     1e-05   25.7   0.5     2    83    71   157    70   168 0.80 Cytochrome b(C-terminal)/b6/petD
Cytochrom_C          PF00034.16    91 sp|P46913|QCRC_BACSU -            255   8.6e-06   26.4   0.1   1   1     1e-08   2.5e-05   25.0   0.1     2    42   181   220   180   252 0.76 Cytochrome c
MFS_1                PF07690.11   352 sp|P46913|QCRC_BACSU -            255   0.00089   18.0   0.8   1   1   4.9e-07    0.0012   17.6   0.8   198   295    37   156     8   164 0.62 Major Facilitator Superfamily
DUF4131              PF13567.1    176 sp|P46913|QCRC_BACSU -            255    0.0026   17.1   0.8   1   1   7.1e-06     0.018   14.4   0.8    11    86    99   179    35   186 0.82 Domain of unknown function (DUF4131)
DctQ                 PF04290.7    133 sp|P46913|QCRC_BACSU -            255     0.086   12.5   2.3   2   2   0.00033      0.81    9.4   0.3    59    96   131   168   121   175 0.84 Tripartite ATP-independent periplasmic transporters, DctQ component
COX1                 PF00115.15   447 sp|P34956|QOX1_BACSU -            649  2.3e-164  547.2  68.2   1   2  1.6e-168  2.3e-164  547.2  68.2     1   447    53   502    53   502 0.99 Cytochrome C and Quinol oxidase polypeptide I
COX2_TM              PF02790.10    84 sp|P34957|QOX2_BACSU -            321   2.3e-08   33.8   0.5   1   1   1.6e-11   4.1e-08   33.0   0.2    26    81    52   111    26   114 0.68 Cytochrome C oxidase subunit II, transmembrane domain
COX_ARM              PF06481.9     47 sp|P34957|QOX2_BACSU -            321   1.5e-06   27.7   0.2   1   1   1.1e-09   2.7e-06   26.9   0.2     1    46   242   286   242   287 0.94 COX Aromatic Rich Motif
Syndecan             PF01034.15    64 sp|P34957|QOX2_BACSU -            321    0.0011   18.5   0.1   1   1   1.4e-06    0.0034   16.9   0.1    19    45    56    83    44    87 0.92 Syndecan domain
COX2                 PF00116.15   120 sp|P34957|QOX2_BACSU -            321    0.0012   18.6   0.1   1   1   2.7e-06    0.0066   16.2   0.1    42   107   151   216   131   229 0.90 Cytochrome C oxidase subunit II, periplasmic domain
Claudin_2            PF13903.1    172 sp|P34957|QOX2_BACSU -            321     0.041   13.5   0.4   1   1   3.1e-05     0.076   12.7   0.4    98   170    30    69     3   112 0.52 PMP-22/EMP/MP20/Claudin tight junction
ABC2_membrane_4      PF12730.2    232 sp|P34957|QOX2_BACSU -            321     0.043   12.9   3.1   1   2   3.6e-05     0.089   11.9   0.4     9    76     7    76     2    78 0.71 ABC-2 family transporter protein
ABC2_membrane_4      PF12730.2    232 sp|P34957|QOX2_BACSU -            321     0.043   12.9   3.1   2   2     9e-05      0.22   10.6   1.5    14    67    52   108    43   119 0.77 ABC-2 family transporter protein
COX3                 PF00510.13   258 sp|P34958|QOX3_BACSU -            204   3.3e-19   69.3  22.6   1   1   4.9e-23   7.3e-19   68.2  22.6    78   257    25   200    16   201 0.90 Cytochrome c oxidase subunit III
COX4_pro             PF03626.9     75 sp|P34959|QOX4_BACSU -            124   5.8e-14   51.9  13.1   1   1   5.1e-17   6.8e-14   51.7  13.1     2    75    16    97    15    97 0.94 Prokaryotic Cytochrome C oxidase subunit IV
MerC                 PF03203.9    116 sp|P34959|QOX4_BACSU -            124    0.0098   16.2   6.2   1   1   9.4e-06     0.013   15.8   6.2    37   110    12   100     4   105 0.87 MerC mercury resistance protein
Polysacc_synt        PF01943.12   273 sp|P34959|QOX4_BACSU -            124     0.015   14.6   6.1   1   1   1.3e-05     0.017   14.4   6.1    71   171     5    98     1   103 0.72 Polysaccharide biosynthesis protein
DUF3611              PF12263.3    183 sp|P34959|QOX4_BACSU -            124     0.045   13.1   4.4   2   2   1.3e-05     0.018   14.4   1.2    16    88    38   109    29   119 0.84 Protein of unknown function (DUF3611)
DUF788               PF05620.6    170 sp|P34959|QOX4_BACSU -            124      0.16   11.8   1.4   1   1   0.00013      0.17   11.7   1.0     1    70     1    67     1    81 0.78 Protein of unknown function (DUF788)
Herpes_LMP1          PF05297.6    381 sp|P34959|QOX4_BACSU -            124       0.2   10.5   2.2   1   1   0.00017      0.24   10.3   2.2   108   209    15   119     6   124 0.56 Herpesvirus latent membrane protein 1 (LMP1)
Queuosine_synth      PF02547.10   341 sp|O32054|QUEA_BACSU -            342  5.8e-144  479.0   0.0   1   1  8.7e-148  6.5e-144  478.8   0.0     2   341     3   342     2   342 0.98 Queuosine biosynthesis protein
DUF2088              PF09861.4    204 sp|O32054|QUEA_BACSU -            342     0.051   12.5   0.2   1   1   1.4e-05      0.11   11.5   0.2    72   141   183   257   174   267 0.79 Domain of unknown function (DUF2088)
QueC                 PF06508.8    210 sp|O31675|QUEC_BACSU -            219   1.3e-86  289.1   0.0   1   1     1e-89   1.5e-86  289.0   0.0     1   209     5   211     5   212 0.98 Queuosine biosynthesis protein QueC
NAD_synthase         PF02540.12   242 sp|O31675|QUEC_BACSU -            219   3.5e-06   26.0   0.0   1   2   3.8e-08   5.7e-05   22.1   0.0    18    88     3    71     1    91 0.83 NAD synthase
ThiI                 PF02568.9    197 sp|O31675|QUEC_BACSU -            219   1.2e-05   24.8   0.0   1   1   9.6e-08   0.00014   21.3   0.0     2   172     2   186     1   190 0.70 Thiamine biosynthesis protein (ThiI)
Asn_synthase         PF00733.16   255 sp|O31675|QUEC_BACSU -            219     4e-05   23.2   0.0   1   1     4e-08   5.9e-05   22.6   0.0    17    79     3    64     1    76 0.91 Asparagine synthase
ATP_bind_4           PF01902.12   219 sp|O31675|QUEC_BACSU -            219   6.7e-05   22.3   0.0   1   1   6.5e-08   9.7e-05   21.8   0.0     2    60     5    58     4    76 0.80 ATP-binding region
ATP_bind_3           PF01171.15   182 sp|O31675|QUEC_BACSU -            219   0.00013   21.5   0.0   1   1   1.5e-07   0.00023   20.7   0.0     2    68     6    66     5    80 0.76 PP-loop family
PAPS_reduct          PF01507.14   174 sp|O31675|QUEC_BACSU -            219   0.00052   19.8   0.2   1   1   9.4e-07    0.0014   18.4   0.0     2    55     6    59     5    76 0.90 Phosphoadenosine phosphosulfate reductase family
Arginosuc_synth      PF00764.14   388 sp|O31675|QUEC_BACSU -            219    0.0066   15.5   0.0   1   2   2.1e-05     0.031   13.3   0.0     2    55     8    61     7    66 0.76 Arginosuccinate synthase
tRNA_Me_trans        PF03054.11   356 sp|O31675|QUEC_BACSU -            219     0.032   12.7   0.0   1   1   3.3e-05     0.049   12.1   0.0     2    70     5    64     4    70 0.86 tRNA methyl transferase
zf-RING_4            PF14570.1     48 sp|O31675|QUEC_BACSU -            219       0.2   11.2   3.6   2   2    0.0001      0.15   11.6   0.9    27    44   185   202   183   205 0.92 RING/Ubox like zinc-binding domain
PTPS                 PF01242.14   123 sp|O31676|QUED_BACSU -            146   8.9e-30  102.9   0.1   1   1   7.1e-34   1.1e-29  102.6   0.1     2   122    17   139    16   140 0.93 6-pyruvoyl tetrahydropterin synthase
Radical_SAM          PF04055.16   166 sp|O31677|QUEE_BACSU -            243   1.1e-15   58.2   0.0   1   1   5.7e-19   1.7e-15   57.5   0.0     2   138    29   178    28   196 0.78 Radical SAM superfamily
Fer4_14              PF13394.1    119 sp|O31677|QUEE_BACSU -            243     1e-13   51.3   0.0   1   2   8.2e-17   2.4e-13   50.1   0.0     1   110    27   129    27   141 0.75 4Fe-4S single cluster domain
Fer4_12              PF13353.1    139 sp|O31677|QUEE_BACSU -            243   1.7e-11   44.4   0.0   1   2     3e-14   8.8e-11   42.0   0.0     1    79    15   101    15   123 0.85 4Fe-4S single cluster domain
DUF4147              PF13660.1    239 sp|O31677|QUEE_BACSU -            243     0.062   12.3   0.0   1   1   3.6e-05      0.11   11.6   0.0   102   155    59   112    56   117 0.93 Domain of unknown function (DUF4147)
Mitofilin            PF09731.4    582 sp|O31677|QUEE_BACSU -            243     0.094   11.3   0.0   1   1   3.8e-05      0.11   11.1   0.0   191   268   138   218   100   228 0.93 Mitochondrial inner membrane protein
QueF                 PF14489.1     81 sp|O31678|QUEF_BACSU -            165   3.1e-35  119.9   0.0   1   1   9.4e-39   4.7e-35  119.3   0.0     1    79    62   140    62   142 0.98 QueF-like protein
QueF_N               PF14819.1    110 sp|O31678|QUEF_BACSU -            165   2.2e-05   24.4   0.0   1   1   9.1e-09   4.5e-05   23.4   0.0    45   101    57   111    22   117 0.80 Nitrile reductase, 7-cyano-7-deazaguanine-reductase N-term
GTP_cyclohydroI      PF01227.17   179 sp|O31678|QUEF_BACSU -            165      0.19   11.0   0.0   1   1     5e-05      0.24   10.6   0.0    56   134    41   119    20   123 0.81 GTP cyclohydrolase I
DUF1730              PF08331.5     78 sp|P97030|QUEG_BACSU -            386   9.4e-27   92.5   0.0   1   1   2.3e-29   1.7e-26   91.6   0.0     1    78    57   135    57   135 0.99 Domain of unknown function (DUF1730)
Fer4_16              PF13484.1     67 sp|P97030|QUEG_BACSU -            386   3.3e-15   56.5   4.0   1   1   1.2e-17   9.1e-15   55.1   4.0     2    67   188   250   187   250 0.97 4Fe-4S double cluster binding domain
HEAT_2               PF13646.1     88 sp|P97030|QUEG_BACSU -            386   1.9e-14   53.7   0.2   2   2   1.3e-15   9.6e-13   48.2   0.0    16    80   300   365   293   372 0.93 HEAT repeats
HEAT_PBS             PF03130.11    27 sp|P97030|QUEG_BACSU -            386   1.4e-08   34.3   0.6   2   2     6e-07   0.00044   20.4   0.1     2    26   333   357   332   358 0.94 PBS lyase HEAT-like repeat
Fer4_10              PF13237.1     52 sp|P97030|QUEG_BACSU -            386   1.4e-08   34.3   6.1   1   1   3.7e-11   2.7e-08   33.4   6.1     3    52   182   248   180   248 0.96 4Fe-4S dicluster domain
Fer4_9               PF13187.1     55 sp|P97030|QUEG_BACSU -            386   4.6e-06   26.7   1.7   1   2   3.1e-06    0.0023   18.1   0.2    35    54   179   202   125   203 0.77 4Fe-4S dicluster domain
Fer4_6               PF12837.2     24 sp|P97030|QUEG_BACSU -            386   1.2e-05   24.9   6.8   1   2   3.5e-06    0.0026   17.5   2.5     6    24   185   203   184   203 0.94 4Fe-4S binding domain
Fer4_21              PF14697.1     59 sp|P97030|QUEG_BACSU -            386   6.8e-05   22.6   4.8   1   2    0.0001     0.076   12.8   1.1    37    53   184   200   152   205 0.72 4Fe-4S dicluster domain
Fer4_21              PF14697.1     59 sp|P97030|QUEG_BACSU -            386   6.8e-05   22.6   4.8   2   2   0.00039      0.29   11.0   0.1    35    54   231   250   208   252 0.71 4Fe-4S dicluster domain
Fer4                 PF00037.22    24 sp|P97030|QUEG_BACSU -            386   7.9e-05   22.0  11.1   1   2   9.9e-07   0.00074   19.0   3.2     4    23   184   203   182   204 0.92 4Fe-4S binding domain
HEAT_EZ              PF13513.1     55 sp|P97030|QUEG_BACSU -            386   0.00016   22.0   1.7   1   1   3.7e-07   0.00027   21.3   0.0     2    55   299   343   298   343 0.72 HEAT-like repeat
Fer4_18              PF13746.1     69 sp|P97030|QUEG_BACSU -            386   0.00073   19.9   3.5   1   2   4.7e-05     0.035   14.5   0.2    45    65   181   201   121   203 0.79 4Fe-4S dicluster domain
Fer4_7               PF12838.2     52 sp|P97030|QUEG_BACSU -            386    0.0026   18.0  13.0   1   2   4.2e-05     0.031   14.6   4.0    35    52   185   202   153   202 0.86 4Fe-4S dicluster domain
Fer4_7               PF12838.2     52 sp|P97030|QUEG_BACSU -            386    0.0026   18.0  13.0   2   2   4.1e-05     0.031   14.6  12.5     2    50   188   249   187   251 0.66 4Fe-4S dicluster domain
Fer4_2               PF12797.2     22 sp|P97030|QUEG_BACSU -            386    0.0042   16.9  11.8   1   2   0.00017      0.12   12.3   3.3     6    22   184   200   178   200 0.85 4Fe-4S binding domain
Arm                  PF00514.18    41 sp|P97030|QUEG_BACSU -            386    0.0054   16.5   0.1   2   2   0.00016      0.12   12.2   0.0    10    37   313   341   309   344 0.93 Armadillo/beta-catenin-like repeat
HEAT                 PF02985.17    31 sp|P97030|QUEG_BACSU -            386     0.015   15.3   0.0   1   1   0.00021      0.16   12.1   0.0     2    28   317   344   316   345 0.93 HEAT repeat
Fer4_8               PF13183.1     57 sp|P97030|QUEG_BACSU -            386     0.024   14.6  10.2   2   3   0.00076      0.57   10.2  10.8     4    55   187   249   185   251 0.66 4Fe-4S dicluster domain
DNA_alkylation       PF08713.6    213 sp|P97030|QUEG_BACSU -            386     0.069   12.6   0.0   1   1   0.00019      0.14   11.6   0.0   137   213   301   375   295   375 0.87 DNA alkylation repair enzyme
MerR_1               PF13411.1     69 sp|P45870|RACA_BACSU -            184   2.9e-11   42.9   0.0   1   1   1.1e-13   5.8e-11   42.0   0.0     1    63     1    63     1    65 0.96 MerR HTH family regulatory protein
HTH_23               PF13384.1     50 sp|P45870|RACA_BACSU -            184   0.00029   20.3   0.0   1   1   1.5e-06   0.00075   19.0   0.0    23    41     6    24     2    34 0.89 Homeodomain-like domain
HTH_17               PF12728.2     51 sp|P45870|RACA_BACSU -            184   0.00064   19.9   0.0   1   1   2.4e-06    0.0012   19.0   0.0     5    43     4    43     1    48 0.81 Helix-turn-helix domain
HTH_28               PF13518.1     52 sp|P45870|RACA_BACSU -            184    0.0036   17.2   0.0   1   1     2e-05      0.01   15.8   0.0    18    37     6    25     1    28 0.90 Helix-turn-helix domain
HTH_Tnp_1            PF01527.15    76 sp|P45870|RACA_BACSU -            184    0.0043   16.9   0.6   1   1     2e-05      0.01   15.7   0.0    28    63     5    49     1    59 0.66 Transposase
HTH_Tnp_ISL3         PF13542.1     52 sp|P45870|RACA_BACSU -            184    0.0079   15.3   0.0   1   1   3.4e-05     0.017   14.2   0.0    33    50     6    23     6    25 0.92 Helix-turn-helix domain of transposase family ISL3
ORC2                 PF04084.9    326 sp|P45870|RACA_BACSU -            184    0.0097   14.7   1.3   1   1   3.1e-05     0.016   14.0   1.1   258   309   113   164    77   173 0.83 Origin recognition complex subunit 2
HTH_13               PF11972.3     54 sp|P45870|RACA_BACSU -            184     0.025   14.4   0.0   1   1   9.4e-05     0.048   13.5   0.0    16    40     3    30     1    40 0.83 HTH DNA binding domain
DUF1323              PF07037.6    122 sp|P45870|RACA_BACSU -            184     0.054   13.6   3.0   1   1   9.6e-05     0.049   13.8   1.1     1    99     1   100     1   112 0.73 Putative transcription regulator (DUF1323)
Fe_dep_repress       PF01325.14    60 sp|P45870|RACA_BACSU -            184     0.058   13.3   0.2   1   1   0.00032      0.17   11.8   0.0    24    47     2    25     1    38 0.79 Iron dependent repressor, N-terminal DNA binding domain
HTH_29               PF13551.1    112 sp|P45870|RACA_BACSU -            184     0.063   13.4   1.3   1   1   0.00063      0.32   11.1   0.0    14    37     2    25     1    30 0.89 Winged helix-turn helix
V_ATPase_I           PF01496.14   759 sp|P45870|RACA_BACSU -            184     0.067   11.0   6.3   1   1   0.00015     0.077   10.8   6.3    39   147    45   156    21   176 0.71 V-type ATPase 116kDa subunit family
MAT1                 PF06391.8    200 sp|P45870|RACA_BACSU -            184     0.067   12.7   7.6   1   1    0.0002       0.1   12.1   7.6    81   178    76   174    66   182 0.85 CDK-activating kinase assembly factor MAT1
HTH_36               PF13730.1     55 sp|P45870|RACA_BACSU -            184      0.07   13.2   0.0   1   1   0.00035      0.18   11.9   0.0    32    49     7    24     4    25 0.93 Helix-turn-helix domain
HAUS-augmin3         PF14932.1    256 sp|P45870|RACA_BACSU -            184      0.07   12.2  11.4   1   1   0.00012     0.063   12.4  10.2    60   156    77   170    67   183 0.74 HAUS augmin-like complex subunit 3
MerR                 PF00376.18    38 sp|P45870|RACA_BACSU -            184     0.081   12.4   0.0   1   1    0.0003      0.15   11.6   0.0     3    35     4    35     2    38 0.82 MerR family regulatory protein
Prog_receptor        PF02161.10   549 sp|P45870|RACA_BACSU -            184       0.1   11.4   1.6   1   1   0.00024      0.12   11.1   1.6    15   127    55   163    42   177 0.67 Progesterone receptor
DUF2937              PF11157.3    167 sp|P45870|RACA_BACSU -            184      0.11   11.8   5.9   1   2   0.00033      0.17   11.2   3.6    52   112    78   136    74   143 0.84 Protein of unknown function (DUF2937)
Fib_alpha            PF08702.5    146 sp|P45870|RACA_BACSU -            184      0.25   11.4   8.3   1   2   0.00045      0.23   11.5   6.0    27    92    76   140    72   158 0.74 Fibrinogen alpha/beta chain family
Mnd1                 PF03962.10   188 sp|P45870|RACA_BACSU -            184      0.35   10.5  11.9   1   2     0.001      0.51    9.9  10.3    74   153    76   153    38   157 0.82 Mnd1 family
SlyX                 PF04102.7     69 sp|P45870|RACA_BACSU -            184      0.36   11.2  13.1   2   2    0.0012      0.63   10.4   3.2     3    61   108   164   106   170 0.78 SlyX
IncA                 PF04156.9    191 sp|P45870|RACA_BACSU -            184      0.38   10.3   9.9   1   1   0.00099      0.51    9.9   9.9    79   159    76   150    29   175 0.76 IncA protein
Asp_Glu_race         PF01177.17   216 sp|P32960|RACX_BACSU -            227   7.3e-33  114.2   0.3   1   1   1.2e-36   8.6e-33  114.0   0.3     1   215     5   218     5   219 0.84 Asp/Glu/Hydantoin racemase
SATase_N             PF06426.9    105 sp|P32960|RACX_BACSU -            227     0.018   15.2   0.5   1   1   1.1e-05     0.078   13.2   0.5    25    82   141   199   109   202 0.73 Serine acetyltransferase, N-terminal
AAA_25               PF13481.1    194 sp|P37572|RADA_BACSU -            458   6.2e-29  100.7   0.0   1   1   2.5e-31   1.3e-28   99.7   0.0     3   194    61   223    59   223 0.92 AAA domain
KaiC                 PF06745.8    227 sp|P37572|RADA_BACSU -            458   9.7e-15   54.3   0.7   1   2   8.3e-10   4.3e-07   29.2   0.1     1    73    73   144    73   150 0.91 KaiC
KaiC                 PF06745.8    227 sp|P37572|RADA_BACSU -            458   9.7e-15   54.3   0.7   2   2   5.2e-08   2.6e-05   23.4   0.0   104   219   156   273   152   282 0.72 KaiC
ChlI                 PF13541.1    121 sp|P37572|RADA_BACSU -            458   3.6e-11   42.6   0.0   1   1   1.9e-13   9.5e-11   41.2   0.0    53   121   362   430   334   430 0.92 Subunit ChlI of Mg-chelatase
Lon_C                PF05362.8    205 sp|P37572|RADA_BACSU -            458   7.4e-06   25.4   0.1   1   1   7.7e-08   3.9e-05   23.0   0.0    94   174   353   432   343   457 0.86 Lon protease (S16) C-terminal proteolytic domain
DnaB_C               PF03796.10   259 sp|P37572|RADA_BACSU -            458     2e-05   23.6   0.0   1   2   2.8e-07   0.00014   20.8   0.0     2   100    73   167    72   187 0.73 DnaB-like helicase C terminal domain
Rad51                PF08423.6    256 sp|P37572|RADA_BACSU -            458   3.1e-05   22.9   0.1   1   1   3.8e-07   0.00019   20.4   0.1    19   189    72   220    62   231 0.82 Rad51
AAA_24               PF13479.1    213 sp|P37572|RADA_BACSU -            458    0.0002   21.0   0.0   1   1   7.5e-07   0.00038   20.1   0.0     6    81    94   180    89   221 0.79 AAA domain
AAA_22               PF13401.1    131 sp|P37572|RADA_BACSU -            458   0.00047   20.3   0.0   1   1   1.7e-06   0.00089   19.4   0.0     5   124    92   217    88   220 0.85 AAA domain
AAA_16               PF13191.1    185 sp|P37572|RADA_BACSU -            458   0.00057   19.9   0.2   1   1   1.9e-06   0.00098   19.1   0.2    24    63    91   130    74   151 0.84 AAA ATPase domain
AAA_14               PF13173.1    128 sp|P37572|RADA_BACSU -            458   0.00065   19.6   0.0   1   1   2.3e-06    0.0012   18.7   0.0     3    73    92   179    90   223 0.68 AAA domain
AAA                  PF00004.24   132 sp|P37572|RADA_BACSU -            458   0.00067   19.8   0.0   1   1   2.9e-06    0.0015   18.7   0.0     1   111    94   220    94   241 0.75 ATPase family associated with various cellular activities (AAA)
RecA                 PF00154.16   323 sp|P37572|RADA_BACSU -            458   0.00085   18.4   0.1   1   1   2.6e-06    0.0013   17.8   0.1    41   142    80   178    63   208 0.82 recA bacterial DNA recombination protein
Miro                 PF08477.8    119 sp|P37572|RADA_BACSU -            458    0.0015   19.0   0.1   1   1   6.8e-06    0.0035   17.8   0.1     2   115    94   216    93   219 0.70 Miro-like protein
ABC_tran             PF00005.22   137 sp|P37572|RADA_BACSU -            458    0.0076   16.5   0.1   1   1   2.8e-05     0.014   15.6   0.1     8    54    88   134    84   208 0.75 ABC transporter
NTPase_1             PF03266.10   168 sp|P37572|RADA_BACSU -            458     0.012   15.3   0.0   1   1   4.8e-05     0.025   14.3   0.0     2    29    94   121    93   177 0.90 NTPase
Arch_ATPase          PF01637.13   234 sp|P37572|RADA_BACSU -            458     0.012   15.3   0.0   1   1   3.7e-05     0.019   14.6   0.0    21    68    92   139    79   248 0.80 Archaeal ATPase
AAA_18               PF13238.1    129 sp|P37572|RADA_BACSU -            458     0.012   15.8   0.0   1   1   4.2e-05     0.021   15.1   0.0     1    86    94   181    94   188 0.81 AAA domain
DUF2075              PF09848.4    352 sp|P37572|RADA_BACSU -            458     0.015   14.3   0.0   1   1   3.9e-05      0.02   13.9   0.0     2    75    92   167    91   236 0.67 Uncharacterized conserved protein (DUF2075)
AAA_5                PF07728.9    139 sp|P37572|RADA_BACSU -            458     0.016   14.9   0.0   1   1   6.7e-05     0.034   13.8   0.0     2    44    94   139    93   184 0.87 AAA domain (dynein-related subfamily)
AAA_19               PF13245.1     76 sp|P37572|RADA_BACSU -            458     0.034   13.8   0.1   1   1   0.00017     0.086   12.5   0.1     8    50    90   127    86   148 0.86 Part of AAA domain
AAA_30               PF13604.1    196 sp|P37572|RADA_BACSU -            458     0.042   13.4   0.0   1   1    0.0011      0.55    9.7   0.0    19   107    92   181    87   239 0.68 AAA domain
NACHT                PF05729.7    166 sp|P37572|RADA_BACSU -            458     0.051   13.2   0.0   1   1   0.00018     0.092   12.3   0.0     2    26    93   117    92   169 0.90 NACHT domain
KTI12                PF08433.5    270 sp|P37572|RADA_BACSU -            458     0.065   12.4   0.1   1   1   0.00026      0.13   11.4   0.1     3    41    93   132    92   176 0.88 Chromatin associated protein KTI12
MCM                  PF00493.18   331 sp|P37572|RADA_BACSU -            458     0.083   11.6   0.1   1   1   0.00026      0.13   10.9   0.1    60    91    94   129    81   138 0.72 MCM2/3/5 family
AAA_31               PF13614.1    157 sp|P37572|RADA_BACSU -            458     0.091   12.6   0.1   1   1   0.00033      0.17   11.8   0.1     4    40    94   130    91   167 0.91 AAA domain
Elong_Iki1           PF10483.4    280 sp|P37572|RADA_BACSU -            458      0.12   11.6   0.1   1   1   0.00043      0.22   10.8   0.0    28   116   107   195    90   246 0.83 Elongator subunit Iki1
DZR                  PF12773.2     50 sp|P37572|RADA_BACSU -            458      0.15   11.9   0.9   1   1   0.00051      0.26   11.1   0.9    26    50     4    28     1    36 0.73 Double zinc ribbon
Isochorismatase      PF00857.15   174 sp|P37572|RADA_BACSU -            458      0.15   12.0   0.0   1   1   0.00054      0.27   11.1   0.0    13    51   180   220   166   259 0.80 Isochorismatase family
Zeta_toxin           PF06414.7    201 sp|P37572|RADA_BACSU -            458      0.16   11.0   0.1   1   1   0.00057      0.29   10.2   0.1    18    49    93   126    90   136 0.84 Zeta toxin
TPR_12               PF13424.1     78 sp|Q00828|RAPA_BACSU -            378   5.1e-22   77.6   8.7   1   4   1.1e-05    0.0093   15.8   0.3    14    77   109   172    97   173 0.89 Tetratricopeptide repeat
TPR_12               PF13424.1     78 sp|Q00828|RAPA_BACSU -            378   5.1e-22   77.6   8.7   2   4     3e-14   2.6e-11   43.2   0.0    10    77   187   253   181   254 0.92 Tetratricopeptide repeat
TPR_12               PF13424.1     78 sp|Q00828|RAPA_BACSU -            378   5.1e-22   77.6   8.7   3   4   0.00067      0.58   10.1   0.2     6    41   262   297   258   309 0.81 Tetratricopeptide repeat
TPR_12               PF13424.1     78 sp|Q00828|RAPA_BACSU -            378   5.1e-22   77.6   8.7   4   4   0.00029      0.26   11.2   0.1     4    32   335   363   332   375 0.80 Tetratricopeptide repeat
TPR_11               PF13414.1     69 sp|Q00828|RAPA_BACSU -            378   3.5e-14   52.2  16.3   1   4   0.00039      0.34   10.5   1.3     8    66   106   169   101   174 0.78 TPR repeat
TPR_11               PF13414.1     69 sp|Q00828|RAPA_BACSU -            378   3.5e-14   52.2  16.3   2   4     4e-10   3.5e-07   29.7   0.2    15    67   194   251   181   253 0.84 TPR repeat
TPR_11               PF13414.1     69 sp|Q00828|RAPA_BACSU -            378   3.5e-14   52.2  16.3   3   4   0.00024      0.21   11.2   0.2     6    38   264   296   259   315 0.81 TPR repeat
TPR_11               PF13414.1     69 sp|Q00828|RAPA_BACSU -            378   3.5e-14   52.2  16.3   4   4   0.00075      0.66    9.6   0.2     6    30   339   363   335   377 0.81 TPR repeat
TPR_2                PF07719.12    34 sp|Q00828|RAPA_BACSU -            378   1.4e-12   46.4  19.5   3   5   2.5e-09   2.2e-06   27.1   0.0     3    31   224   252   222   254 0.93 Tetratricopeptide repeat
TPR_2                PF07719.12    34 sp|Q00828|RAPA_BACSU -            378   1.4e-12   46.4  19.5   4   5   0.00016      0.14   12.1   0.8     9    33   269   293   267   294 0.91 Tetratricopeptide repeat
TPR_2                PF07719.12    34 sp|Q00828|RAPA_BACSU -            378   1.4e-12   46.4  19.5   5   5   0.00078      0.68    9.9   0.2     6    27   341   362   337   368 0.87 Tetratricopeptide repeat
TPR_1                PF00515.23    34 sp|Q00828|RAPA_BACSU -            378   7.9e-11   41.0  20.6   3   5   5.4e-11   4.8e-08   32.2   0.1     2    31   223   252   222   254 0.91 Tetratricopeptide repeat
TPR_7                PF13176.1     36 sp|Q00828|RAPA_BACSU -            378   1.3e-08   33.9   7.8   3   4   3.7e-07   0.00032   20.2   0.0     1    31   224   254   224   259 0.87 Tetratricopeptide repeat
TPR_10               PF13374.1     42 sp|Q00828|RAPA_BACSU -            378   2.2e-08   33.7   0.5   2   4   3.2e-05     0.028   14.3   0.0     3    33   223   253   221   254 0.93 Tetratricopeptide repeat
TPR_16               PF13432.1     65 sp|Q00828|RAPA_BACSU -            378     1e-07   32.4   2.0   1   3   1.2e-05     0.011   16.4   0.0    13    54   198   245   190   251 0.91 Tetratricopeptide repeat
TPR_14               PF13428.1     44 sp|Q00828|RAPA_BACSU -            378   1.8e-07   31.1   0.4   4   4   0.00037      0.33   11.7   0.0     2    28   337   363   336   371 0.87 Tetratricopeptide repeat
TPR_8                PF13181.1     34 sp|Q00828|RAPA_BACSU -            378   4.8e-07   29.1  23.6   3   5   2.2e-08     2e-05   24.0   0.4     3    31   224   252   222   255 0.92 Tetratricopeptide repeat
TPR_8                PF13181.1     34 sp|Q00828|RAPA_BACSU -            378   4.8e-07   29.1  23.6   5   5   0.00035      0.31   10.9   0.1     8    26   343   361   338   367 0.92 Tetratricopeptide repeat
Apc3                 PF12895.2     84 sp|Q00828|RAPA_BACSU -            378   1.6e-06   28.1  16.0   2   4   6.7e-07   0.00059   19.9   1.4     3    79   196   282   194   289 0.83 Anaphase-promoting complex, cyclosome, subunit 3
TPR_6                PF13174.1     33 sp|Q00828|RAPA_BACSU -            378   3.4e-05   24.0  12.3   2   4   2.2e-06     0.002   18.4   0.1     2    24   224   246   223   249 0.94 Tetratricopeptide repeat
TPR_17               PF13431.1     34 sp|Q00828|RAPA_BACSU -            378   0.00014   21.8   2.4   2   3    0.0001     0.091   13.0   0.1     9    32   217   241   208   243 0.86 Tetratricopeptide repeat
Cohesin_load         PF10345.4    609 sp|Q00828|RAPA_BACSU -            378   0.00018   19.8   0.7   2   2   2.1e-07   0.00018   19.8   0.7    77   166   238   326   205   331 0.84 Cohesin loading factor
TPR_19               PF14559.1     68 sp|Q00828|RAPA_BACSU -            378   0.00028   21.1   9.3   1   3   9.6e-05     0.084   13.2   0.1     7    48   198   245   194   248 0.80 Tetratricopeptide repeat
PPR                  PF01535.15    31 sp|Q00828|RAPA_BACSU -            378   0.00041   20.1   0.2   2   2   0.00024      0.21   11.6   0.0    10    27   346   363   344   365 0.92 PPR repeat
RPN7                 PF10602.4    177 sp|Q00828|RAPA_BACSU -            378    0.0013   18.1   2.0   1   2   0.00075      0.65    9.3   0.0    16    68   202   254   198   258 0.86 26S proteasome subunit RPN7
Foie-gras_1          PF11817.3    247 sp|Q00828|RAPA_BACSU -            378    0.0053   16.2   7.2   1   2   7.2e-06    0.0063   16.0   2.8    87   233   114   277    16   288 0.76 Foie gras liver health family 1
TPR_12               PF13424.1     78 sp|P70962|RAPB_BACSU -            377   2.7e-22   78.4  14.0   1   4   5.5e-06    0.0043   16.9   0.3    13    77   107   171    97   172 0.87 Tetratricopeptide repeat
TPR_12               PF13424.1     78 sp|P70962|RAPB_BACSU -            377   2.7e-22   78.4  14.0   2   4   1.6e-14   1.2e-11   44.3   0.4     6    77   182   252   179   253 0.92 Tetratricopeptide repeat
TPR_12               PF13424.1     78 sp|P70962|RAPB_BACSU -            377   2.7e-22   78.4  14.0   3   4   4.6e-05     0.036   14.0   0.2    44    78   258   292   254   292 0.91 Tetratricopeptide repeat
TPR_12               PF13424.1     78 sp|P70962|RAPB_BACSU -            377   2.7e-22   78.4  14.0   4   4   0.00051       0.4   10.6   0.2    52    77   341   366   336   372 0.70 Tetratricopeptide repeat
TPR_11               PF13414.1     69 sp|P70962|RAPB_BACSU -            377   1.8e-19   69.1  14.6   1   4   2.1e-06    0.0016   18.0   0.1     5    66   102   168    98   171 0.82 TPR repeat
TPR_11               PF13414.1     69 sp|P70962|RAPB_BACSU -            377   1.8e-19   69.1  14.6   2   4   5.4e-11   4.2e-08   32.7   0.7     6    65   184   248   179   251 0.82 TPR repeat
TPR_11               PF13414.1     69 sp|P70962|RAPB_BACSU -            377   1.8e-19   69.1  14.6   3   4   2.7e-05     0.021   14.4   0.2     3    35   260   292   257   307 0.86 TPR repeat
TPR_11               PF13414.1     69 sp|P70962|RAPB_BACSU -            377   1.8e-19   69.1  14.6   4   4   0.00021      0.17   11.5   0.2     7    33   339   365   334   374 0.85 TPR repeat
TPR_1                PF00515.23    34 sp|P70962|RAPB_BACSU -            377   1.2e-13   49.9  27.1   3   5   4.7e-11   3.7e-08   32.6   1.2     3    30   223   250   221   254 0.90 Tetratricopeptide repeat
TPR_1                PF00515.23    34 sp|P70962|RAPB_BACSU -            377   1.2e-13   49.9  27.1   4   5   0.00019      0.15   11.7   0.2    10    31   269   290   260   292 0.85 Tetratricopeptide repeat
TPR_1                PF00515.23    34 sp|P70962|RAPB_BACSU -            377   1.2e-13   49.9  27.1   5   5   0.00096      0.75    9.5   0.2    13    30   347   364   342   366 0.85 Tetratricopeptide repeat
TPR_2                PF07719.12    34 sp|P70962|RAPB_BACSU -            377   1.5e-13   49.5  24.5   1   5   0.00085      0.66   10.0   0.4     3    28   102   127   100   130 0.89 Tetratricopeptide repeat
TPR_2                PF07719.12    34 sp|P70962|RAPB_BACSU -            377   1.5e-13   49.5  24.5   3   5   1.2e-08   9.3e-06   25.1   0.5     3    28   223   248   221   248 0.96 Tetratricopeptide repeat
TPR_2                PF07719.12    34 sp|P70962|RAPB_BACSU -            377   1.5e-13   49.5  24.5   4   5   0.00053      0.41   10.6   0.2     3    31   262   290   254   293 0.86 Tetratricopeptide repeat
TPR_8                PF13181.1     34 sp|P70962|RAPB_BACSU -            377   1.1e-12   46.7  18.6   3   5   1.1e-09   8.5e-07   28.3   0.7     3    28   223   248   221   248 0.96 Tetratricopeptide repeat
TPR_8                PF13181.1     34 sp|P70962|RAPB_BACSU -            377   1.1e-12   46.7  18.6   4   5   0.00039      0.31   10.9   0.1     3    34   262   294   260   294 0.84 Tetratricopeptide repeat
TPR_7                PF13176.1     36 sp|P70962|RAPB_BACSU -            377   7.1e-11   41.0  11.6   3   5     1e-07   7.8e-05   22.1   0.2     1    31   223   254   223   259 0.89 Tetratricopeptide repeat
TPR_7                PF13176.1     36 sp|P70962|RAPB_BACSU -            377   7.1e-11   41.0  11.6   4   5   5.9e-05     0.046   13.5   0.0     1    29   262   288   262   297 0.87 Tetratricopeptide repeat
TPR_16               PF13432.1     65 sp|P70962|RAPB_BACSU -            377   8.6e-09   35.8  10.9   2   4   5.3e-07   0.00041   20.9   2.3    11    58   195   248   190   255 0.90 Tetratricopeptide repeat
TPR_16               PF13432.1     65 sp|P70962|RAPB_BACSU -            377   8.6e-09   35.8  10.9   3   4   0.00022      0.17   12.5   0.1    13    59   244   288   244   295 0.87 Tetratricopeptide repeat
Apc3                 PF12895.2     84 sp|P70962|RAPB_BACSU -            377     1e-08   35.1  15.8   1   4     2e-08   1.6e-05   24.9   2.2     1    83   112   206   111   207 0.83 Anaphase-promoting complex, cyclosome, subunit 3
Apc3                 PF12895.2     84 sp|P70962|RAPB_BACSU -            377     1e-08   35.1  15.8   2   4   0.00012     0.094   12.8   0.3    25    83   221   285   210   286 0.84 Anaphase-promoting complex, cyclosome, subunit 3
TPR_14               PF13428.1     44 sp|P70962|RAPB_BACSU -            377     2e-07   31.0   4.1   2   4   0.00079      0.62   10.8   0.0     3    33   223   253   222   258 0.87 Tetratricopeptide repeat
SNAP                 PF14938.1    282 sp|P70962|RAPB_BACSU -            377   6.7e-07   28.7  18.9   2   3   4.1e-07   0.00032   19.9   0.0    78   152   185   258   180   266 0.90 Soluble NSF attachment protein, SNAP
SNAP                 PF14938.1    282 sp|P70962|RAPB_BACSU -            377   6.7e-07   28.7  18.9   3   3   0.00083      0.65    9.1   7.5    84   183   270   363   264   371 0.85 Soluble NSF attachment protein, SNAP
TPR_10               PF13374.1     42 sp|P70962|RAPB_BACSU -            377   9.7e-07   28.5   7.1   1   3   0.00018      0.14   12.1   0.0     3    29   222   248   221   250 0.95 Tetratricopeptide repeat
TPR_10               PF13374.1     42 sp|P70962|RAPB_BACSU -            377   9.7e-07   28.5   7.1   3   3   4.9e-05     0.038   13.9   0.1     9    33   342   366   340   369 0.93 Tetratricopeptide repeat
TPR_6                PF13174.1     33 sp|P70962|RAPB_BACSU -            377   6.3e-06   26.3  12.6   1   3     1e-06   0.00081   19.6   0.1     2    26   223   247   222   248 0.94 Tetratricopeptide repeat
TPR_19               PF14559.1     68 sp|P70962|RAPB_BACSU -            377    0.0054   17.0  10.0   1   2     4e-05     0.031   14.5   3.3     2    63   192   258   191   263 0.80 Tetratricopeptide repeat
TPR_17               PF13431.1     34 sp|P70962|RAPB_BACSU -            377     0.027   14.6   4.4   1   2   0.00046      0.36   11.1   0.1     5    32   212   240   210   242 0.84 Tetratricopeptide repeat
HEPN                 PF05168.9    118 sp|P70962|RAPB_BACSU -            377      0.16   11.8   0.3   2   3    0.0002      0.16   11.8   0.3     2    38   134   170   133   172 0.93 HEPN domain
Apc5                 PF12862.2     94 sp|P70962|RAPB_BACSU -            377      0.94    9.3  18.0   1   2   0.00013       0.1   12.4   2.6     7    81   190   300   184   309 0.77 Anaphase-promoting complex subunit 5
TPR_12               PF13424.1     78 sp|P94415|RAPC_BACSU -            382   3.1e-20   71.8  15.8   1   4   1.2e-06    0.0012   18.6   0.5    15    75   111   171    99   174 0.84 Tetratricopeptide repeat
TPR_12               PF13424.1     78 sp|P94415|RAPC_BACSU -            382   3.1e-20   71.8  15.8   2   4     4e-14   4.2e-11   42.6   0.2     6    77   184   254   179   255 0.89 Tetratricopeptide repeat
TPR_12               PF13424.1     78 sp|P94415|RAPC_BACSU -            382   3.1e-20   71.8  15.8   3   4   4.9e-06    0.0052   16.6   0.2    46    77   263   294   259   295 0.89 Tetratricopeptide repeat
TPR_11               PF13414.1     69 sp|P94415|RAPC_BACSU -            382   1.2e-13   50.5  20.8   1   3   1.7e-05     0.018   14.7   1.7     7    53   106   158   102   172 0.78 TPR repeat
TPR_11               PF13414.1     69 sp|P94415|RAPC_BACSU -            382   1.2e-13   50.5  20.8   2   3   2.7e-12   2.9e-09   36.4   0.9     4    66   184   251   181   254 0.88 TPR repeat
TPR_11               PF13414.1     69 sp|P94415|RAPC_BACSU -            382   1.2e-13   50.5  20.8   3   3   9.9e-05       0.1   12.2   0.5     3    36   263   296   261   313 0.84 TPR repeat
TPR_1                PF00515.23    34 sp|P94415|RAPC_BACSU -            382   2.5e-12   45.8  18.5   4   5   8.1e-11   8.6e-08   31.4   0.2     2    28   224   250   223   255 0.94 Tetratricopeptide repeat
TPR_1                PF00515.23    34 sp|P94415|RAPC_BACSU -            382   2.5e-12   45.8  18.5   5   5   5.4e-05     0.058   13.0   1.1     4    26   266   288   263   294 0.82 Tetratricopeptide repeat
TPR_2                PF07719.12    34 sp|P94415|RAPC_BACSU -            382   4.3e-12   44.9  24.4   3   6   0.00044      0.47   10.5   0.0     4    30   186   212   183   215 0.87 Tetratricopeptide repeat
TPR_2                PF07719.12    34 sp|P94415|RAPC_BACSU -            382   4.3e-12   44.9  24.4   4   6   2.8e-08     3e-05   23.6   0.1     2    29   224   251   223   255 0.93 Tetratricopeptide repeat
TPR_2                PF07719.12    34 sp|P94415|RAPC_BACSU -            382   4.3e-12   44.9  24.4   5   6   0.00028      0.29   11.1   0.5     3    31   265   293   263   296 0.82 Tetratricopeptide repeat
TPR_16               PF13432.1     65 sp|P94415|RAPC_BACSU -            382   6.2e-08   33.1  10.2   2   3   1.2e-08   1.3e-05   25.6   0.6     5    59   191   251   189   257 0.91 Tetratricopeptide repeat
Apc3                 PF12895.2     84 sp|P94415|RAPC_BACSU -            382   1.2e-06   28.5  22.0   1   3     6e-07   0.00064   19.8   4.2    26    81   139   206   110   209 0.69 Anaphase-promoting complex, cyclosome, subunit 3
Apc3                 PF12895.2     84 sp|P94415|RAPC_BACSU -            382   1.2e-06   28.5  22.0   2   3   5.3e-07   0.00056   19.9   3.8     2    78   196   283   195   288 0.82 Anaphase-promoting complex, cyclosome, subunit 3
Apc3                 PF12895.2     84 sp|P94415|RAPC_BACSU -            382   1.2e-06   28.5  22.0   3   3   4.3e-05     0.045   13.8   0.4     2    62   236   301   235   322 0.72 Anaphase-promoting complex, cyclosome, subunit 3
TPR_6                PF13174.1     33 sp|P94415|RAPC_BACSU -            382   3.1e-05   24.1  16.5   2   3   3.6e-07   0.00038   20.7   0.1     2    30   225   253   224   256 0.93 Tetratricopeptide repeat
TPR_8                PF13181.1     34 sp|P94415|RAPC_BACSU -            382     6e-05   22.5  27.3   4   6   5.4e-07   0.00057   19.4   0.1     2    29   224   251   223   252 0.95 Tetratricopeptide repeat
TPR_8                PF13181.1     34 sp|P94415|RAPC_BACSU -            382     6e-05   22.5  27.3   5   6    0.0007      0.74    9.7   0.6     2    32   264   294   263   297 0.87 Tetratricopeptide repeat
TPR_14               PF13428.1     44 sp|P94415|RAPC_BACSU -            382   0.00039   20.7   2.9   2   3   0.00019       0.2   12.3   0.0     2    33   224   255   223   260 0.92 Tetratricopeptide repeat
TPR_7                PF13176.1     36 sp|P94415|RAPC_BACSU -            382    0.0021   17.7  14.9   4   4   0.00043      0.46   10.4   0.3     1    27   265   289   265   300 0.86 Tetratricopeptide repeat
TPR_10               PF13374.1     42 sp|P94415|RAPC_BACSU -            382    0.0051   16.7   2.9   1   2   0.00087      0.92    9.5   0.0     3    30   224   251   222   254 0.92 Tetratricopeptide repeat
Sel1                 PF08238.7     39 sp|P94415|RAPC_BACSU -            382     0.037   14.6   0.1   2   2   3.4e-05     0.037   14.6   0.1     2    34   224   249   223   251 0.84 Sel1 repeat
TPR_19               PF14559.1     68 sp|P94415|RAPC_BACSU -            382      0.33   11.3  12.7   1   3   0.00017      0.18   12.1   1.5     1    57   193   255   193   265 0.81 Tetratricopeptide repeat
TPR_12               PF13424.1     78 sp|P94583|RAPD_BACSU -            354   1.2e-14   53.9  15.6   1   4   1.9e-06    0.0018   18.1   1.3    22    76   107   160    85   162 0.85 Tetratricopeptide repeat
TPR_12               PF13424.1     78 sp|P94583|RAPD_BACSU -            354   1.2e-14   53.9  15.6   2   4   4.3e-13   3.9e-10   39.5   1.9     7    74   173   239   169   242 0.93 Tetratricopeptide repeat
TPR_19               PF14559.1     68 sp|P94583|RAPD_BACSU -            354   3.9e-08   33.4   6.5   2   3   1.2e-05     0.011   16.0   0.1    28    57   174   203   151   218 0.86 Tetratricopeptide repeat
TPR_19               PF14559.1     68 sp|P94583|RAPD_BACSU -            354   3.9e-08   33.4   6.5   3   3   3.2e-05      0.03   14.6   0.0     6    54   226   281   222   293 0.75 Tetratricopeptide repeat
TPR_16               PF13432.1     65 sp|P94583|RAPD_BACSU -            354   1.1e-07   32.3   3.8   2   3   9.3e-07   0.00086   19.9   0.4     1    60   175   240   175   244 0.92 Tetratricopeptide repeat
TPR_2                PF07719.12    34 sp|P94583|RAPD_BACSU -            354   1.1e-06   28.0  19.4   2   5   3.6e-05     0.033   14.0   0.2     6    30   176   200   173   203 0.91 Tetratricopeptide repeat
TPR_2                PF07719.12    34 sp|P94583|RAPD_BACSU -            354   1.1e-06   28.0  19.4   3   5   0.00013      0.12   12.3   0.9     3    29   213   239   211   242 0.93 Tetratricopeptide repeat
Apc3                 PF12895.2     84 sp|P94583|RAPD_BACSU -            354     1e-05   25.5  19.4   1   3   2.4e-06    0.0022   18.0   8.9     3    83   111   196   109   197 0.83 Anaphase-promoting complex, cyclosome, subunit 3
Apc3                 PF12895.2     84 sp|P94583|RAPD_BACSU -            354     1e-05   25.5  19.4   2   3   0.00016      0.15   12.1   0.7     1    39   183   218   183   226 0.89 Anaphase-promoting complex, cyclosome, subunit 3
Apc3                 PF12895.2     84 sp|P94583|RAPD_BACSU -            354     1e-05   25.5  19.4   3   3    0.0001     0.093   12.8   0.3     6    71   228   300   223   310 0.80 Anaphase-promoting complex, cyclosome, subunit 3
TPR_11               PF13414.1     69 sp|P94583|RAPD_BACSU -            354   2.3e-05   23.9  16.1   2   4   3.2e-08   2.9e-05   23.6   2.4     8    67   176   240   172   242 0.87 TPR repeat
TPR_14               PF13428.1     44 sp|P94583|RAPD_BACSU -            354   2.4e-05   24.5   0.6   2   3   0.00024      0.22   12.2   0.0     5    32   175   202   173   220 0.84 Tetratricopeptide repeat
TPR_10               PF13374.1     42 sp|P94583|RAPD_BACSU -            354     4e-05   23.3   3.3   1   4   8.6e-05      0.08   12.9   0.0     2    38   171   207   170   208 0.86 Tetratricopeptide repeat
SNAP                 PF14938.1    282 sp|P94583|RAPD_BACSU -            354   9.1e-05   21.7   3.4   1   2   9.8e-08   9.1e-05   21.7   3.4    86   185   102   201    81   222 0.91 Soluble NSF attachment protein, SNAP
TPR_1                PF00515.23    34 sp|P94583|RAPD_BACSU -            354   0.00036   20.0  22.7   2   4   0.00064       0.6    9.8   0.6     7    29   177   199   174   200 0.89 Tetratricopeptide repeat
TPR_1                PF00515.23    34 sp|P94583|RAPD_BACSU -            354   0.00036   20.0  22.7   3   4   4.5e-05     0.041   13.4   1.2     3    29   213   239   212   242 0.95 Tetratricopeptide repeat
TPR_8                PF13181.1     34 sp|P94583|RAPD_BACSU -            354      0.01   15.5  22.2   1   4   0.00092      0.85    9.5   0.3     7    29   177   199   175   202 0.88 Tetratricopeptide repeat
TPR_8                PF13181.1     34 sp|P94583|RAPD_BACSU -            354      0.01   15.5  22.2   2   4   0.00037      0.34   10.7   0.6     1    29   211   239   211   242 0.95 Tetratricopeptide repeat
tRNA-Thr_ED          PF08915.6    138 sp|P94583|RAPD_BACSU -            354     0.019   14.9   1.1   1   1   4.9e-05     0.046   13.7   0.4    41   112   176   246   151   253 0.91 Archaea-specific editing domain of threonyl-tRNA synthetase
TPR_21               PF09976.4    145 sp|P94583|RAPD_BACSU -            354      0.11   12.4   1.8   1   1   0.00026      0.24   11.3   0.4    49   106   172   232   124   246 0.83 Tetratricopeptide repeat
TPR_12               PF13424.1     78 sp|P45943|RAPE_BACSU -            375   1.1e-23   82.8  10.1   1   3   3.7e-07   0.00029   20.7   0.5     7    78    97   168    91   168 0.83 Tetratricopeptide repeat
TPR_12               PF13424.1     78 sp|P45943|RAPE_BACSU -            375   1.1e-23   82.8  10.1   2   3   2.9e-16   2.3e-13   49.8   1.9     6    78   178   251   175   251 0.92 Tetratricopeptide repeat
TPR_12               PF13424.1     78 sp|P45943|RAPE_BACSU -            375   1.1e-23   82.8  10.1   3   3   1.9e-05     0.015   15.2   0.0    47    73   259   285   252   288 0.86 Tetratricopeptide repeat
TPR_2                PF07719.12    34 sp|P45943|RAPE_BACSU -            375   3.2e-21   73.4  14.5   1   6   3.7e-06    0.0029   17.4   0.2     3    33    98   128    96   129 0.89 Tetratricopeptide repeat
TPR_2                PF07719.12    34 sp|P45943|RAPE_BACSU -            375   3.2e-21   73.4  14.5   3   6   0.00044      0.34   10.9   0.0     3    29   179   205   177   205 0.91 Tetratricopeptide repeat
TPR_2                PF07719.12    34 sp|P45943|RAPE_BACSU -            375   3.2e-21   73.4  14.5   4   6   8.2e-08   6.4e-05   22.5   0.5     1    29   219   247   219   251 0.91 Tetratricopeptide repeat
TPR_2                PF07719.12    34 sp|P45943|RAPE_BACSU -            375   3.2e-21   73.4  14.5   5   6     8e-08   6.2e-05   22.6   0.1     1    29   258   286   258   288 0.93 Tetratricopeptide repeat
TPR_1                PF00515.23    34 sp|P45943|RAPE_BACSU -            375   1.1e-20   72.2  16.1   1   5    0.0001     0.079   12.6   0.0     7    27   102   122   100   128 0.88 Tetratricopeptide repeat
TPR_1                PF00515.23    34 sp|P45943|RAPE_BACSU -            375   1.1e-20   72.2  16.1   2   5   0.00035      0.27   10.8   0.1    11    29   187   205   178   205 0.91 Tetratricopeptide repeat
TPR_1                PF00515.23    34 sp|P45943|RAPE_BACSU -            375   1.1e-20   72.2  16.1   3   5   9.4e-09   7.3e-06   25.3   1.0     1    28   219   246   219   251 0.93 Tetratricopeptide repeat
TPR_1                PF00515.23    34 sp|P45943|RAPE_BACSU -            375   1.1e-20   72.2  16.1   4   5   5.8e-09   4.5e-06   26.0   0.0     2    28   259   285   258   287 0.94 Tetratricopeptide repeat
TPR_11               PF13414.1     69 sp|P45943|RAPE_BACSU -            375   2.1e-18   65.6  14.9   1   4   1.1e-07   8.3e-05   22.1   1.1     7    65   100   163    94   167 0.80 TPR repeat
TPR_11               PF13414.1     69 sp|P45943|RAPE_BACSU -            375   2.1e-18   65.6  14.9   2   4   3.9e-10   3.1e-07   29.9   2.4     4    65   178   246   175   250 0.82 TPR repeat
TPR_11               PF13414.1     69 sp|P45943|RAPE_BACSU -            375   2.1e-18   65.6  14.9   3   4   2.8e-06    0.0022   17.6   0.0     3    35   258   290   256   318 0.77 TPR repeat
TPR_7                PF13176.1     36 sp|P45943|RAPE_BACSU -            375   4.7e-14   50.9   1.8   1   4   0.00042      0.32   10.8   0.0    10    27   107   122   103   131 0.83 Tetratricopeptide repeat
TPR_7                PF13176.1     36 sp|P45943|RAPE_BACSU -            375   4.7e-14   50.9   1.8   3   4   0.00012     0.093   12.5   0.1     1    26   221   246   221   255 0.88 Tetratricopeptide repeat
TPR_7                PF13176.1     36 sp|P45943|RAPE_BACSU -            375   4.7e-14   50.9   1.8   4   4   2.1e-05     0.016   14.9   0.0     1    31   260   288   260   295 0.89 Tetratricopeptide repeat
TPR_8                PF13181.1     34 sp|P45943|RAPE_BACSU -            375     7e-13   47.3  20.3   1   6    0.0013      0.99    9.3   0.9     4    27    99   122    95   125 0.89 Tetratricopeptide repeat
TPR_8                PF13181.1     34 sp|P45943|RAPE_BACSU -            375     7e-13   47.3  20.3   3   6   0.00017      0.14   12.0   0.0    10    29   186   205   177   208 0.86 Tetratricopeptide repeat
TPR_8                PF13181.1     34 sp|P45943|RAPE_BACSU -            375     7e-13   47.3  20.3   4   6   6.9e-05     0.054   13.3   0.2     3    28   221   246   219   246 0.93 Tetratricopeptide repeat
TPR_8                PF13181.1     34 sp|P45943|RAPE_BACSU -            375     7e-13   47.3  20.3   5   6     3e-06    0.0024   17.5   0.0     2    29   259   286   258   288 0.92 Tetratricopeptide repeat
TPR_14               PF13428.1     44 sp|P45943|RAPE_BACSU -            375   1.4e-10   40.8   0.0   4   4   0.00017      0.13   12.9   0.0     1    31   258   288   258   302 0.87 Tetratricopeptide repeat
TPR_16               PF13432.1     65 sp|P45943|RAPE_BACSU -            375   1.7e-10   41.2   0.2   2   4   9.9e-07   0.00077   20.0   0.2     7    59   187   247   182   255 0.86 Tetratricopeptide repeat
TPR_16               PF13432.1     65 sp|P45943|RAPE_BACSU -            375   1.7e-10   41.2   0.2   3   4   8.6e-05     0.068   13.8   0.2    12    50   234   277   234   288 0.89 Tetratricopeptide repeat
TPR_10               PF13374.1     42 sp|P45943|RAPE_BACSU -            375   2.3e-08   33.7   2.5   2   3   0.00027      0.21   11.5   0.1     3    32   220   250   218   252 0.74 Tetratricopeptide repeat
TPR_10               PF13374.1     42 sp|P45943|RAPE_BACSU -            375   2.3e-08   33.7   2.5   3   3   0.00021      0.16   11.9   0.0     4    23   260   279   259   284 0.89 Tetratricopeptide repeat
TPR_19               PF14559.1     68 sp|P45943|RAPE_BACSU -            375   3.7e-08   33.5   2.8   2   3   1.4e-06    0.0011   19.2   0.3     5    57   191   251   189   257 0.80 Tetratricopeptide repeat
TPR_6                PF13174.1     33 sp|P45943|RAPE_BACSU -            375   6.5e-07   29.3  10.3   2   3   6.7e-05     0.052   14.0   0.2     2    30   221   249   220   251 0.95 Tetratricopeptide repeat
TPR_6                PF13174.1     33 sp|P45943|RAPE_BACSU -            375   6.5e-07   29.3  10.3   3   3   0.00014      0.11   13.0   0.2     2    25   260   283   259   283 0.91 Tetratricopeptide repeat
Apc3                 PF12895.2     84 sp|P45943|RAPE_BACSU -            375   1.2e-06   28.5  17.9   1   4   0.00067      0.52   10.4   1.0    27    73    96   144    75   147 0.77 Anaphase-promoting complex, cyclosome, subunit 3
Apc3                 PF12895.2     84 sp|P45943|RAPE_BACSU -            375   1.2e-06   28.5  17.9   2   4   2.2e-06    0.0017   18.4   3.7     2    83   109   202   108   203 0.76 Anaphase-promoting complex, cyclosome, subunit 3
Apc3                 PF12895.2     84 sp|P45943|RAPE_BACSU -            375   1.2e-06   28.5  17.9   3   4   3.9e-05      0.03   14.4   3.7     6    83   201   283   200   284 0.80 Anaphase-promoting complex, cyclosome, subunit 3
Apc3                 PF12895.2     84 sp|P45943|RAPE_BACSU -            375   1.2e-06   28.5  17.9   4   4   9.8e-05     0.077   13.1   0.5     4    51   234   287   231   304 0.76 Anaphase-promoting complex, cyclosome, subunit 3
TPR_17               PF13431.1     34 sp|P45943|RAPE_BACSU -            375   4.1e-06   26.5   2.7   3   3   0.00014      0.11   12.7   0.0    13    32   258   277   250   279 0.90 Tetratricopeptide repeat
RPN7                 PF10602.4    177 sp|P45943|RAPE_BACSU -            375    0.0055   16.0   8.9   3   3   0.00053      0.41    9.9   0.1    37    66   259   289   253   325 0.76 26S proteasome subunit RPN7
SNAP                 PF14938.1    282 sp|P45943|RAPE_BACSU -            375      0.02   14.0   1.0   2   2   2.6e-05      0.02   14.0   1.0    49   115   213   279   191   284 0.72 Soluble NSF attachment protein, SNAP
TPR_20               PF14561.1     90 sp|P45943|RAPE_BACSU -            375     0.084   13.0   0.6   1   1   0.00036      0.28   11.3   0.1    23    71   259   303   236   306 0.82 Tetratricopeptide repeat
TPR_12               PF13424.1     78 sp|P71002|RAPF_BACSU -            381   4.2e-21   74.6  12.0   1   4   3.2e-05     0.034   14.0   0.5    14    77   109   172    97   173 0.90 Tetratricopeptide repeat
TPR_12               PF13424.1     78 sp|P71002|RAPF_BACSU -            381   4.2e-21   74.6  12.0   2   4   5.1e-16   5.4e-13   48.6   0.3     4    77   181   253   177   254 0.91 Tetratricopeptide repeat
TPR_12               PF13424.1     78 sp|P71002|RAPF_BACSU -            381   4.2e-21   74.6  12.0   3   4    0.0008      0.85    9.6   0.0    45    75   261   291   256   298 0.69 Tetratricopeptide repeat
TPR_11               PF13414.1     69 sp|P71002|RAPF_BACSU -            381   1.2e-17   63.2  14.2   1   5   0.00048      0.51   10.0   1.8     8    67   106   170   101   172 0.81 TPR repeat
TPR_11               PF13414.1     69 sp|P71002|RAPF_BACSU -            381   1.2e-17   63.2  14.2   2   5   1.2e-06    0.0012   18.3   3.5     1    66   139   210   139   213 0.93 TPR repeat
TPR_11               PF13414.1     69 sp|P71002|RAPF_BACSU -            381   1.2e-17   63.2  14.2   3   5   1.9e-11     2e-08   33.7   0.5     5    66   184   250   180   253 0.86 TPR repeat
TPR_11               PF13414.1     69 sp|P71002|RAPF_BACSU -            381   1.2e-17   63.2  14.2   4   5   3.9e-11   4.2e-08   32.7   0.1     5    67   224   291   221   293 0.87 TPR repeat
Apc3                 PF12895.2     84 sp|P71002|RAPF_BACSU -            381     1e-15   57.6  17.8   1   2   7.1e-14   7.6e-11   42.0   8.7     1    84   113   208   113   208 0.85 Anaphase-promoting complex, cyclosome, subunit 3
Apc3                 PF12895.2     84 sp|P71002|RAPF_BACSU -            381     1e-15   57.6  17.8   2   2   2.3e-07   0.00024   21.1   0.1    26    77   217   281   205   284 0.72 Anaphase-promoting complex, cyclosome, subunit 3
TPR_2                PF07719.12    34 sp|P71002|RAPF_BACSU -            381   2.6e-11   42.5  20.4   3   6     7e-05     0.074   13.0   0.1    10    30   191   211   183   214 0.84 Tetratricopeptide repeat
TPR_2                PF07719.12    34 sp|P71002|RAPF_BACSU -            381   2.6e-11   42.5  20.4   4   6   0.00032      0.34   10.9   0.0     3    31   224   252   222   255 0.84 Tetratricopeptide repeat
TPR_1                PF00515.23    34 sp|P71002|RAPF_BACSU -            381   3.6e-11   42.1  25.2   2   5   8.6e-05     0.091   12.4   0.1    12    27   193   208   190   213 0.89 Tetratricopeptide repeat
TPR_1                PF00515.23    34 sp|P71002|RAPF_BACSU -            381   3.6e-11   42.1  25.2   3   5   1.3e-09   1.3e-06   27.7   0.0     2    30   223   251   222   255 0.92 Tetratricopeptide repeat
TPR_16               PF13432.1     65 sp|P71002|RAPF_BACSU -            381   4.6e-07   30.3   5.3   2   2   6.8e-07   0.00072   20.1   0.0    10    50   235   281   234   285 0.95 Tetratricopeptide repeat
TPR_8                PF13181.1     34 sp|P71002|RAPF_BACSU -            381   8.4e-06   25.2  31.0   2   6   6.2e-05     0.065   13.0   0.2    12    31   193   212   190   215 0.90 Tetratricopeptide repeat
TPR_8                PF13181.1     34 sp|P71002|RAPF_BACSU -            381   8.4e-06   25.2  31.0   3   6   3.1e-05     0.033   13.9   0.0     2    28   223   249   222   251 0.94 Tetratricopeptide repeat
TPR_7                PF13176.1     36 sp|P71002|RAPF_BACSU -            381   1.4e-05   24.5  12.8   3   4   3.9e-05     0.041   13.6   0.0     1    30   224   251   224   257 0.84 Tetratricopeptide repeat
TPR_19               PF14559.1     68 sp|P71002|RAPF_BACSU -            381   0.00014   22.1  10.6   3   4   8.3e-05     0.088   13.1   0.0     4    50   235   287   232   297 0.82 Tetratricopeptide repeat
SNAP                 PF14938.1    282 sp|P71002|RAPF_BACSU -            381   0.00065   18.9  16.5   1   2   6.3e-05     0.066   12.3  10.4    23   175   123   282   116   295 0.46 Soluble NSF attachment protein, SNAP
TPR_6                PF13174.1     33 sp|P71002|RAPF_BACSU -            381   0.00092   19.5   8.4   3   4   0.00012      0.13   12.8   0.0     3    30   225   252   223   255 0.91 Tetratricopeptide repeat
TPR_12               PF13424.1     78 sp|O32294|RAPG_BACSU -            365   1.5e-16   60.0  18.3   1   4   3.5e-07   0.00035   20.4   0.1    14    77    96   159    83   160 0.91 Tetratricopeptide repeat
TPR_12               PF13424.1     78 sp|O32294|RAPG_BACSU -            365   1.5e-16   60.0  18.3   2   4   1.3e-12   1.2e-09   37.9   0.6     4    74   168   237   165   240 0.92 Tetratricopeptide repeat
TPR_12               PF13424.1     78 sp|O32294|RAPG_BACSU -            365   1.5e-16   60.0  18.3   4   4   0.00028      0.28   11.1   0.6    11    40   332   361   327   364 0.88 Tetratricopeptide repeat
TPR_11               PF13414.1     69 sp|O32294|RAPG_BACSU -            365   4.4e-12   45.4  17.8   1   4   3.7e-07   0.00037   20.0   0.5     8    65    93   155    88   160 0.83 TPR repeat
TPR_11               PF13414.1     69 sp|O32294|RAPG_BACSU -            365   4.4e-12   45.4  17.8   2   4   1.9e-10   1.8e-07   30.6   0.4     2    68   168   239   167   240 0.85 TPR repeat
TPR_2                PF07719.12    34 sp|O32294|RAPG_BACSU -            365   3.6e-06   26.4  25.0   4   6   2.6e-05     0.025   14.4   0.1     1    31   209   239   209   242 0.92 Tetratricopeptide repeat
TPR_16               PF13432.1     65 sp|O32294|RAPG_BACSU -            365   3.1e-05   24.4  11.4   2   4   0.00079      0.78   10.4   0.1     3    61   134   199   132   204 0.85 Tetratricopeptide repeat
TPR_16               PF13432.1     65 sp|O32294|RAPG_BACSU -            365   3.1e-05   24.4  11.4   3   4   4.7e-06    0.0047   17.5   1.0    12    63   184   241   179   245 0.86 Tetratricopeptide repeat
Apc5                 PF12862.2     94 sp|O32294|RAPG_BACSU -            365   0.00067   19.4   5.6   1   2   0.00055      0.54   10.1   2.3    36    78   157   206    74   215 0.82 Anaphase-promoting complex subunit 5
Apc3                 PF12895.2     84 sp|O32294|RAPG_BACSU -            365    0.0033   17.5  20.7   1   3    0.0003      0.29   11.2   0.6     2    83   101   194   100   195 0.73 Anaphase-promoting complex, cyclosome, subunit 3
Apc3                 PF12895.2     84 sp|O32294|RAPG_BACSU -            365    0.0033   17.5  20.7   2   3   1.8e-05     0.018   15.1   8.3     2    83   182   273   181   274 0.82 Anaphase-promoting complex, cyclosome, subunit 3
TPR_7                PF13176.1     36 sp|O32294|RAPG_BACSU -            365     0.022   14.5  14.4   4   6   0.00028      0.28   11.0   0.1     2    33   212   241   211   244 0.87 Tetratricopeptide repeat
TPR_9                PF13371.1     73 sp|O32294|RAPG_BACSU -            365      0.04   13.7   0.3   1   1   0.00013      0.13   12.0   0.3    10    65   184   245   180   255 0.83 Tetratricopeptide repeat
TPR_12               PF13424.1     78 sp|Q59HN8|RAPH_BACSU -            376   2.4e-22   78.6   4.0   1   4   2.1e-06    0.0017   18.2   0.7    15    77   108   170    98   171 0.88 Tetratricopeptide repeat
TPR_12               PF13424.1     78 sp|Q59HN8|RAPH_BACSU -            376   2.4e-22   78.6   4.0   2   4   3.1e-14   2.6e-11   43.3   0.2     6    77   181   251   172   252 0.91 Tetratricopeptide repeat
TPR_12               PF13424.1     78 sp|Q59HN8|RAPH_BACSU -            376   2.4e-22   78.6   4.0   3   4   1.3e-10   1.1e-07   31.6   0.0     3    74   218   287   216   288 0.92 Tetratricopeptide repeat
TPR_2                PF07719.12    34 sp|Q59HN8|RAPH_BACSU -            376   1.7e-18   64.9  10.4   1   6   2.9e-05     0.024   14.5   0.6     3    31   101   129    99   131 0.90 Tetratricopeptide repeat
TPR_2                PF07719.12    34 sp|Q59HN8|RAPH_BACSU -            376   1.7e-18   64.9  10.4   3   6   0.00094      0.77    9.8   0.1    15    31   194   210   185   213 0.92 Tetratricopeptide repeat
TPR_2                PF07719.12    34 sp|Q59HN8|RAPH_BACSU -            376   1.7e-18   64.9  10.4   4   6   3.2e-06    0.0027   17.5   0.0     2    30   221   249   220   252 0.90 Tetratricopeptide repeat
TPR_11               PF13414.1     69 sp|Q59HN8|RAPH_BACSU -            376   3.2e-14   52.3  13.8   1   4   1.9e-08   1.6e-05   24.4   0.9     5    66   101   167    98   170 0.76 TPR repeat
TPR_11               PF13414.1     69 sp|Q59HN8|RAPH_BACSU -            376   3.2e-14   52.3  13.8   2   4   1.8e-09   1.5e-06   27.7   0.6     5    67   182   249   178   251 0.80 TPR repeat
TPR_11               PF13414.1     69 sp|Q59HN8|RAPH_BACSU -            376   3.2e-14   52.3  13.8   3   4     2e-05     0.017   14.7   0.0     3    63   220   284   219   288 0.82 TPR repeat
TPR_7                PF13176.1     36 sp|Q59HN8|RAPH_BACSU -            376   2.1e-12   45.8   1.8   3   5   2.5e-06     0.002   17.7   0.0     1    32   222   251   222   255 0.86 Tetratricopeptide repeat
TPR_1                PF00515.23    34 sp|Q59HN8|RAPH_BACSU -            376   1.3e-10   40.4  13.6   1   5   0.00017      0.14   11.8   0.6     3    27   101   125    99   130 0.89 Tetratricopeptide repeat
TPR_1                PF00515.23    34 sp|Q59HN8|RAPH_BACSU -            376   1.3e-10   40.4  13.6   4   5   2.1e-06    0.0017   17.8   0.0     2    30   221   249   220   252 0.90 Tetratricopeptide repeat
TPR_16               PF13432.1     65 sp|Q59HN8|RAPH_BACSU -            376   4.2e-09   36.8   1.4   1   4   1.4e-05     0.011   16.3   0.0     3    46   105   154   103   157 0.92 Tetratricopeptide repeat
TPR_10               PF13374.1     42 sp|Q59HN8|RAPH_BACSU -            376     2e-07   30.6   1.2   4   5    0.0012      0.98    9.4   0.0     2    34   220   252   219   256 0.89 Tetratricopeptide repeat
Apc3                 PF12895.2     84 sp|Q59HN8|RAPH_BACSU -            376   5.3e-06   26.4  14.2   1   3   4.8e-08     4e-05   23.6   2.4     1    83   111   205   111   206 0.76 Anaphase-promoting complex, cyclosome, subunit 3
TPR_8                PF13181.1     34 sp|Q59HN8|RAPH_BACSU -            376   5.2e-05   22.7  16.9   3   5   0.00055      0.45   10.4   0.0     5    31   184   210   180   210 0.84 Tetratricopeptide repeat
TPR_8                PF13181.1     34 sp|Q59HN8|RAPH_BACSU -            376   5.2e-05   22.7  16.9   4   5    0.0005      0.41   10.5   0.0     4    32   223   251   220   254 0.91 Tetratricopeptide repeat
Foie-gras_1          PF11817.3    247 sp|Q59HN8|RAPH_BACSU -            376    0.0042   16.5   2.1   1   1   5.1e-06    0.0042   16.5   2.1   127   208   168   250    81   275 0.70 Foie gras liver health family 1
TPR_12               PF13424.1     78 sp|P96649|RAPI_BACSU -            391   2.6e-15   56.0  10.5   1   4   1.6e-05     0.033   14.1   0.3    14    77   111   174   101   175 0.90 Tetratricopeptide repeat
TPR_12               PF13424.1     78 sp|P96649|RAPI_BACSU -            391   2.6e-15   56.0  10.5   2   4   2.9e-11   6.2e-08   32.4   0.4    20    78   199   256   185   256 0.89 Tetratricopeptide repeat
TPR_12               PF13424.1     78 sp|P96649|RAPI_BACSU -            391   2.6e-15   56.0  10.5   3   4   1.2e-10   2.5e-07   30.5   0.4     4    72   223   289   220   295 0.92 Tetratricopeptide repeat
TPR_11               PF13414.1     69 sp|P96649|RAPI_BACSU -            391   1.2e-07   31.2  15.4   1   4   3.9e-05     0.082   12.5   1.0     5    67   105   172   102   174 0.83 TPR repeat
TPR_11               PF13414.1     69 sp|P96649|RAPI_BACSU -            391   1.2e-07   31.2  15.4   2   4   5.1e-09   1.1e-05   24.9   0.1    12    67   193   253   184   255 0.85 TPR repeat
Apc3                 PF12895.2     84 sp|P96649|RAPI_BACSU -            391   9.2e-05   22.5   3.3   2   4   4.3e-08   9.2e-05   22.5   3.3     8    82   125   208   120   210 0.81 Anaphase-promoting complex, cyclosome, subunit 3
TPR_2                PF07719.12    34 sp|P96649|RAPI_BACSU -            391   0.00014   21.5  19.9   4   5   1.8e-05     0.037   13.9   0.0     3    32   226   255   224   257 0.90 Tetratricopeptide repeat
TPR_1                PF00515.23    34 sp|P96649|RAPI_BACSU -            391   0.00023   20.6   0.1   4   5   1.1e-07   0.00023   20.6   0.1     3    32   226   255   224   257 0.91 Tetratricopeptide repeat
TPR_8                PF13181.1     34 sp|P96649|RAPI_BACSU -            391     0.094   12.5   0.3   4   6   4.5e-05     0.094   12.5   0.3     4    30   227   253   226   256 0.93 Tetratricopeptide repeat
TPR_12               PF13424.1     78 sp|O34327|RAPJ_BACSU -            373   4.6e-16   58.5  23.4   1   4   1.4e-07   0.00013   21.7   2.3    13    77   106   170    95   171 0.87 Tetratricopeptide repeat
TPR_12               PF13424.1     78 sp|O34327|RAPJ_BACSU -            373   4.6e-16   58.5  23.4   2   4   2.7e-11   2.5e-08   33.7   2.8    12    77   187   251   182   252 0.90 Tetratricopeptide repeat
TPR_12               PF13424.1     78 sp|O34327|RAPJ_BACSU -            373   4.6e-16   58.5  23.4   3   4   0.00095      0.88    9.5   0.1    13    42   267   296   256   313 0.82 Tetratricopeptide repeat
TPR_11               PF13414.1     69 sp|O34327|RAPJ_BACSU -            373   1.4e-11   43.8  24.2   1   4   6.4e-06    0.0059   16.2   3.2     5    67   101   168    98   171 0.80 TPR repeat
TPR_11               PF13414.1     69 sp|O34327|RAPJ_BACSU -            373   1.4e-11   43.8  24.2   2   4   6.8e-07   0.00063   19.3   3.1    19    67   196   249   194   251 0.75 TPR repeat
TPR_11               PF13414.1     69 sp|O34327|RAPJ_BACSU -            373   1.4e-11   43.8  24.2   3   4   1.8e-05     0.017   14.7   0.1     7    32   263   288   256   299 0.83 TPR repeat
TPR_1                PF00515.23    34 sp|O34327|RAPJ_BACSU -            373   1.5e-08   33.8  30.5   1   3   0.00039      0.36   10.5   2.8     3    27   101   125    99   128 0.91 Tetratricopeptide repeat
TPR_1                PF00515.23    34 sp|O34327|RAPJ_BACSU -            373   1.5e-08   33.8  30.5   2   3   2.1e-08     2e-05   24.0   1.5     1    31   220   250   220   253 0.91 Tetratricopeptide repeat
TPR_1                PF00515.23    34 sp|O34327|RAPJ_BACSU -            373   1.5e-08   33.8  30.5   3   3   3.3e-06    0.0031   17.0   0.2     9    29   267   287   267   288 0.93 Tetratricopeptide repeat
TPR_2                PF07719.12    34 sp|O34327|RAPJ_BACSU -            373   7.6e-08   31.6  31.2   1   5   0.00064      0.59   10.1   2.2     3    28   101   126    99   130 0.91 Tetratricopeptide repeat
TPR_2                PF07719.12    34 sp|O34327|RAPJ_BACSU -            373   7.6e-08   31.6  31.2   3   5   1.3e-07   0.00012   21.7   1.5     1    33   220   252   220   253 0.93 Tetratricopeptide repeat
TPR_2                PF07719.12    34 sp|O34327|RAPJ_BACSU -            373   7.6e-08   31.6  31.2   4   5   8.2e-05     0.076   12.9   0.3    10    29   268   287   267   291 0.91 Tetratricopeptide repeat
Apc3                 PF12895.2     84 sp|O34327|RAPJ_BACSU -            373   2.8e-07   30.5  22.3   1   3   1.3e-06    0.0012   18.9   3.9    26    83   139   205   120   206 0.77 Anaphase-promoting complex, cyclosome, subunit 3
Apc3                 PF12895.2     84 sp|O34327|RAPJ_BACSU -            373   2.8e-07   30.5  22.3   2   3   6.8e-06    0.0063   16.6   5.3    12    83   210   284   205   285 0.77 Anaphase-promoting complex, cyclosome, subunit 3
TPR_16               PF13432.1     65 sp|O34327|RAPJ_BACSU -            373     5e-06   27.0  10.8   1   4   0.00066      0.61   10.8   0.0     3    58   105   166   103   173 0.85 Tetratricopeptide repeat
TPR_7                PF13176.1     36 sp|O34327|RAPJ_BACSU -            373   2.9e-05   23.5   0.7   3   4   0.00027      0.25   11.2   0.1     1    27   222   248   222   257 0.82 Tetratricopeptide repeat
TPR_7                PF13176.1     36 sp|O34327|RAPJ_BACSU -            373   2.9e-05   23.5   0.7   4   4   1.2e-06    0.0011   18.6   0.0     4    29   264   287   261   295 0.87 Tetratricopeptide repeat
SNAP                 PF14938.1    282 sp|O34327|RAPJ_BACSU -            373   0.00027   20.1  24.5   2   3   3.4e-07   0.00032   19.9   7.7    78   186   184   290   177   312 0.85 Soluble NSF attachment protein, SNAP
TPR_6                PF13174.1     33 sp|O34327|RAPJ_BACSU -            373   0.00055   20.2   5.8   2   3    0.0002      0.18   12.3   0.1     2    27   222   247   221   253 0.89 Tetratricopeptide repeat
TPR_10               PF13374.1     42 sp|O34327|RAPJ_BACSU -            373    0.0047   16.8   5.2   1   3   4.1e-05     0.038   13.9   0.0     2    35   220   253   219   255 0.94 Tetratricopeptide repeat
PPR                  PF01535.15    31 sp|O34327|RAPJ_BACSU -            373    0.0061   16.4   2.4   2   2   0.00012      0.11   12.4   0.0     6    25   265   284   264   288 0.85 PPR repeat
TPR_8                PF13181.1     34 sp|O34327|RAPJ_BACSU -            373     0.017   14.8   1.1   3   5   1.9e-05     0.017   14.8   1.1     1    27   220   246   220   249 0.91 Tetratricopeptide repeat
TPR_19               PF14559.1     68 sp|O34327|RAPJ_BACSU -            373     0.029   14.7   8.9   2   4   0.00019      0.18   12.1   0.7    16    57   205   252   194   262 0.70 Tetratricopeptide repeat
TPR_19               PF14559.1     68 sp|O34327|RAPJ_BACSU -            373     0.029   14.7   8.9   3   4   4.8e-05     0.044   14.1   0.2     4    56   233   290   231   300 0.78 Tetratricopeptide repeat
PPR_1                PF12854.2     34 sp|O34327|RAPJ_BACSU -            373     0.088   12.3   0.0   1   1   0.00029      0.27   10.7   0.0    15    30   267   282   264   284 0.82 PPR repeat
TPR_12               PF13424.1     78 sp|O34930|RAPK_BACSU -            371   7.4e-14   51.4  13.9   2   4   2.2e-05     0.027   14.3   2.1    15    77   103   165    94   166 0.91 Tetratricopeptide repeat
TPR_12               PF13424.1     78 sp|O34930|RAPK_BACSU -            371   7.4e-14   51.4  13.9   3   4   5.3e-12   6.6e-09   35.5   0.1    11    73   181   242   167   245 0.90 Tetratricopeptide repeat
TPR_11               PF13414.1     69 sp|O34930|RAPK_BACSU -            371   2.3e-06   27.1   1.1   4   5   1.9e-09   2.3e-06   27.1   1.1     9    65   181   242   173   245 0.87 TPR repeat
TPR_8                PF13181.1     34 sp|O34930|RAPK_BACSU -            371     5e-06   25.9  26.5   3   5   2.2e-06    0.0027   17.3   0.8    11    32   185   206   178   209 0.90 Tetratricopeptide repeat
TPR_8                PF13181.1     34 sp|O34930|RAPK_BACSU -            371     5e-06   25.9  26.5   4   5   3.9e-05     0.049   13.4   0.0     2    28   216   242   215   244 0.92 Tetratricopeptide repeat
TPR_1                PF00515.23    34 sp|O34930|RAPK_BACSU -            371   9.7e-05   21.8  22.4   3   5   2.1e-05     0.026   14.1   2.3    11    31   185   205   182   207 0.91 Tetratricopeptide repeat
TPR_14               PF13428.1     44 sp|O34930|RAPK_BACSU -            371   0.00027   21.2   0.1   2   3   0.00057      0.71   10.6   0.3     7    33   181   207   175   218 0.81 Tetratricopeptide repeat
TPR_2                PF07719.12    34 sp|O34930|RAPK_BACSU -            371    0.0013   18.4  21.3   3   5   1.4e-05     0.017   15.0   1.3     8    32   182   206   180   208 0.90 Tetratricopeptide repeat
Apc3                 PF12895.2     84 sp|O34930|RAPK_BACSU -            371    0.0031   17.6  21.7   2   4   6.8e-06    0.0084   16.2   7.6     2    83   107   200   106   201 0.80 Anaphase-promoting complex, cyclosome, subunit 3
TPR_10               PF13374.1     42 sp|O34930|RAPK_BACSU -            371       0.2   11.6   0.2   1   1   0.00016       0.2   11.6   0.2     9    34   182   207   174   211 0.88 Tetratricopeptide repeat
Peptidase_M50        PF02163.17   192 sp|O31754|RASP_BACSU -            422   2.7e-74  248.2   0.7   1   1   1.2e-77   3.5e-74  247.9   0.7     1   192     8   416     8   416 1.00 Peptidase family M50
PDZ_2                PF13180.1     82 sp|O31754|RASP_BACSU -            422   9.5e-09   35.0   0.0   1   1   8.6e-12   2.6e-08   33.6   0.0    22    81   210   268   199   268 0.95 PDZ domain
PDZ                  PF00595.19    81 sp|O31754|RASP_BACSU -            422   3.4e-05   23.9   0.1   1   1   2.1e-08   6.3e-05   23.0   0.1    34    70   212   245   196   257 0.75 PDZ domain (Also known as DHR or GLGF)
Tricorn_PDZ          PF14685.1     88 sp|O31754|RASP_BACSU -            422    0.0029   17.3   0.1   1   1   3.7e-06     0.011   15.5   0.1    36    81   218   261   194   267 0.81 Tricorn protease PDZ domain
DUF1491              PF07372.7    104 sp|O31754|RASP_BACSU -            422     0.021   14.7   0.0   1   2   4.2e-05      0.12   12.2   0.0    49   101    71   123    57   126 0.80 Protein of unknown function (DUF1491)
RBFA                 PF02033.13   104 sp|P32731|RBFA_BACSU -            117   1.7e-38  130.7   0.0   1   1   1.3e-42     2e-38  130.6   0.0     1   104     4   107     4   107 0.99 Ribosome-binding factor A
MMR_HSR1             PF01926.18   116 sp|O31743|RBGA_BACSU -            282   8.1e-19   67.6   0.0   2   2   2.3e-19     2e-16   59.9   0.0     2    68   123   189   122   245 0.76 50S ribosome-binding GTPase
FeoB_N               PF02421.13   156 sp|O31743|RBGA_BACSU -            282   4.3e-10   39.0   0.4   2   2   1.7e-11   1.5e-08   34.0   0.0     3    88   123   205   121   210 0.85 Ferrous iron transport protein B
Arf                  PF00025.16   175 sp|O31743|RBGA_BACSU -            282   1.8e-05   24.0   0.6   2   2   6.1e-06    0.0054   16.0   0.0    10    43   116   149   107   171 0.78 ADP-ribosylation factor family
DUF258               PF03193.11   161 sp|O31743|RBGA_BACSU -            282   0.00011   21.4   0.0   1   1     4e-07   0.00035   19.8   0.0    38   102   123   180    86   187 0.83 Protein of unknown function, DUF258
PduV-EutP            PF10662.4    143 sp|O31743|RBGA_BACSU -            282   0.00012   21.6   0.1   1   2   0.00011     0.099   12.1   0.0    65   139    25    98     7   102 0.87 Ethanolamine utilisation - propanediol utilisation
GTP_EFTU             PF00009.22   188 sp|O31743|RBGA_BACSU -            282   0.00019   20.9   0.2   1   2   0.00025      0.22   10.9   0.0    78   146     7    74     6   110 0.70 Elongation factor Tu GTP binding domain
AAA_17               PF13207.1    121 sp|O31743|RBGA_BACSU -            282   0.00021   22.0   0.2   1   1     1e-06   0.00091   20.0   0.2     3    23   124   184   122   278 0.54 AAA domain
Dynamin_N            PF00350.18   168 sp|O31743|RBGA_BACSU -            282   0.00025   20.9   1.1   2   2     5e-05     0.044   13.6   0.3     3    33   125   157   123   248 0.82 Dynamin family
AAA_18               PF13238.1    129 sp|O31743|RBGA_BACSU -            282   0.00048   20.4   1.3   1   1   1.3e-06    0.0011   19.2   0.3     2    36   124   176   124   272 0.72 AAA domain
ArgK                 PF03308.11   267 sp|O31743|RBGA_BACSU -            282   0.00062   18.6   0.8   2   2   1.3e-05     0.012   14.4   0.1    27    61   118   153    91   157 0.72 ArgK protein
SRPRB                PF09439.5    181 sp|O31743|RBGA_BACSU -            282    0.0012   18.0   0.0   1   1     4e-06    0.0035   16.5   0.0     5    58   122   174   118   208 0.82 Signal recognition particle receptor beta subunit
AAA_14               PF13173.1    128 sp|O31743|RBGA_BACSU -            282    0.0088   15.9   0.0   1   1     3e-05     0.026   14.4   0.0     6    27   124   145   121   170 0.88 AAA domain
Miro                 PF08477.8    119 sp|O31743|RBGA_BACSU -            282     0.017   15.6   0.0   1   1   4.5e-05     0.039   14.4   0.0     2    58   123   173   122   190 0.64 Miro-like protein
MobB                 PF03205.9    140 sp|O31743|RBGA_BACSU -            282     0.021   14.5   0.1   1   1   4.7e-05     0.041   13.5   0.1     2    24   122   144   121   159 0.82 Molybdopterin guanine dinucleotide synthesis protein B
AIG1                 PF04548.11   212 sp|O31743|RBGA_BACSU -            282     0.073   12.1   0.1   1   1   0.00029      0.25   10.4   0.0     3    60   123   176   121   188 0.83 AIG1 family
AAA_28               PF13521.1    163 sp|O31743|RBGA_BACSU -            282     0.094   12.6   0.0   1   1    0.0002      0.17   11.7   0.0     3    25   124   146   122   175 0.79 AAA domain
ABC_tran             PF00005.22   137 sp|P36947|RBSA_BACSU -            493   2.8e-54  183.1   0.7   1   2   1.8e-34   1.1e-31  109.9   0.4     1   137    18   168    18   168 0.90 ABC transporter
ABC_tran             PF00005.22   137 sp|P36947|RBSA_BACSU -            493   2.8e-54  183.1   0.7   2   2   1.3e-22   8.3e-20   71.4   0.0     2   136   268   421   267   422 0.86 ABC transporter
AAA_21               PF13304.1    303 sp|P36947|RBSA_BACSU -            493   8.6e-16   58.7   1.4   1   2   1.3e-09   7.9e-07   29.3   0.6     2   297    31   197    30   202 0.80 AAA domain
AAA_21               PF13304.1    303 sp|P36947|RBSA_BACSU -            493   8.6e-16   58.7   1.4   2   2   2.7e-07   0.00017   21.6   0.0   173   296   330   450   301   450 0.85 AAA domain
DUF258               PF03193.11   161 sp|P36947|RBSA_BACSU -            493   1.7e-07   30.5   0.4   1   2   1.1e-07   6.7e-05   22.1   0.1    21    69    13    62     1    67 0.81 Protein of unknown function, DUF258
AAA_15               PF13175.1    415 sp|P36947|RBSA_BACSU -            493     7e-05   22.0   1.0   1   2   4.5e-05     0.028   13.4   0.2    24    76    30    88     9   139 0.71 AAA ATPase domain
UPF0079              PF02367.12   123 sp|P36947|RBSA_BACSU -            493   0.00011   21.8   0.4   1   2    0.0013      0.83    9.2   0.1    10    38    23    50    15    64 0.80 Uncharacterised P-loop hydrolase UPF0079
UPF0079              PF02367.12   123 sp|P36947|RBSA_BACSU -            493   0.00011   21.8   0.4   2   2   0.00072      0.44   10.1   0.0    12    35   274   297   267   307 0.88 Uncharacterised P-loop hydrolase UPF0079
AAA_29               PF13555.1     62 sp|P36947|RBSA_BACSU -            493   0.00022   20.6   0.6   1   1   1.8e-06    0.0011   18.4   0.1    15    41    21    46    16    63 0.78 P-loop containing region of AAA domain
SMC_N                PF02463.14   220 sp|P36947|RBSA_BACSU -            493   0.00037   19.7   3.4   1   1   0.00011     0.067   12.4   1.8    26   207    30   208     9   220 0.61 RecF/RecN/SMC N terminal domain
ABC_ATPase           PF09818.4    448 sp|P36947|RBSA_BACSU -            493   0.00071   18.2   7.5   2   3   0.00027      0.17   10.4   1.5   356   421   161   222   138   248 0.76 Predicted ATPase of the ABC class
AAA_17               PF13207.1    121 sp|P36947|RBSA_BACSU -            493   0.00087   20.0   0.2   2   2   0.00065       0.4   11.5   0.0     1    46   279   321   279   383 0.77 AAA domain
AAA_30               PF13604.1    196 sp|P36947|RBSA_BACSU -            493    0.0038   16.8   2.0   1   2   0.00097       0.6    9.6   0.0    19    49    29    59    21    66 0.85 AAA domain
AAA_10               PF12846.2    304 sp|P36947|RBSA_BACSU -            493    0.0045   16.4   3.0   1   2    0.0011      0.71    9.2   0.1     6    29    33    57    30    69 0.78 AAA-like domain
AAA_22               PF13401.1    131 sp|P36947|RBSA_BACSU -            493     0.006   16.7   3.0   1   2   0.00051      0.32   11.1   0.6     8   122    32   195    27   201 0.59 AAA domain
AAA                  PF00004.24   132 sp|P36947|RBSA_BACSU -            493     0.013   15.7   3.7   2   2   0.00082      0.51   10.5   1.0    15   115   116   202   102   213 0.80 ATPase family associated with various cellular activities (AAA)
MMR_HSR1             PF01926.18   116 sp|P36947|RBSA_BACSU -            493     0.017   15.0   2.2   1   2   0.00015      0.09   12.7   0.8     3    24    32    53    30   234 0.84 50S ribosome-binding GTPase
AAA_23               PF13476.1    202 sp|P36947|RBSA_BACSU -            493     0.018   15.3   2.2   1   1   0.00014     0.087   13.1   0.9    21    41    30    50     3   187 0.84 AAA domain
RNA_helicase         PF00910.17   107 sp|P36947|RBSA_BACSU -            493     0.019   15.1   0.0   1   1   0.00019      0.12   12.6   0.0     3    61    33    95    31   132 0.64 RNA helicase
Acid_phosphat_B      PF03767.9    230 sp|P36947|RBSA_BACSU -            493     0.031   13.6   0.1   1   2   0.00046      0.29   10.4   0.0   116   144   173   201   163   206 0.88 HAD superfamily, subfamily IIIB (Acid phosphatase)
AAA_13               PF13166.1    712 sp|P36947|RBSA_BACSU -            493     0.032   12.7   0.0   1   1   8.1e-05      0.05   12.0   0.0    23    60    35    83    28   198 0.66 AAA domain
AAA_25               PF13481.1    194 sp|P36947|RBSA_BACSU -            493     0.072   12.4   0.0   1   1   0.00031      0.19   11.0   0.0    29    50    25    45     7    85 0.86 AAA domain
Peripla_BP_4         PF13407.1    257 sp|P36949|RBSB_BACSU -            305     7e-66  222.2   7.4   1   1   4.9e-69     8e-66  222.0   7.4     1   257    40   290    40   290 0.97 Periplasmic binding protein domain
Peripla_BP_1         PF00532.16   279 sp|P36949|RBSB_BACSU -            305   1.2e-23   83.7   1.5   1   1   8.6e-27   1.4e-23   83.4   1.5     3   253    39   280    37   304 0.80 Periplasmic binding proteins and sugar binding domain of LacI family
Peripla_BP_3         PF13377.1    160 sp|P36949|RBSB_BACSU -            305   6.5e-12   45.7   0.0   2   2   1.9e-14   3.2e-11   43.5   0.0    18   146   168   293   135   303 0.75 Periplasmic binding protein-like domain
ABC_sub_bind         PF04392.7    294 sp|P36949|RBSB_BACSU -            305     1e-05   24.6   3.9   1   2   1.9e-08   3.2e-05   23.0   1.6   142   257    49   165    36   174 0.81 ABC transporter substrate binding protein
Peripla_BP_6         PF13458.1    343 sp|P36949|RBSB_BACSU -            305    0.0004   19.8   1.6   1   1   4.6e-07   0.00076   18.9   1.7    44   247    69   270    57   286 0.75 Periplasmic binding protein
OrfB_Zn_ribbon       PF07282.6     69 sp|P36949|RBSB_BACSU -            305     0.006   16.2   0.0   1   1   1.3e-05     0.021   14.4   0.0     2    32    53    84    52    96 0.90 Putative transposase DNA-binding domain
PucR                 PF07905.6    123 sp|P36949|RBSB_BACSU -            305     0.076   12.6   0.0   1   1   7.9e-05      0.13   11.8   0.0    56   109    77   128    61   140 0.83 Purine catabolism regulatory protein-like family
BPD_transp_2         PF02653.11   267 sp|P36948|RBSC_BACSU -            322   2.4e-54  184.1  40.5   1   1   4.5e-58   3.3e-54  183.6  40.5     1   267    47   314    47   314 0.95 Branched-chain amino acid transport system / permease component
RbsD_FucU            PF05025.8    142 sp|P36946|RBSD_BACSU -            131   6.4e-46  156.1   0.1   1   1   4.8e-50   7.1e-46  156.0   0.1     1   142     1   131     1   131 0.98 RbsD / FucU transport protein family
PfkB                 PF00294.19   301 sp|P36945|RBSK_BACSU -            293   8.3e-75  251.6   0.3   1   1   1.3e-78   9.4e-75  251.5   0.3     1   300     1   284     1   285 0.94 pfkB family carbohydrate kinase
Phos_pyr_kin         PF08543.7    246 sp|P36945|RBSK_BACSU -            293     1e-06   28.1   0.3   1   1   1.6e-09   1.2e-05   24.6   0.2   103   226   160   267   121   274 0.73 Phosphomethylpyrimidine kinase
RecA                 PF00154.16   323 sp|P16971|RECA_BACSU -            348  1.9e-176  585.8   3.9   1   1  2.4e-179  2.2e-176  585.6   3.9     2   321     7   325     6   327 0.99 recA bacterial DNA recombination protein
Rad51                PF08423.6    256 sp|P16971|RECA_BACSU -            348   3.7e-09   35.8   0.1   1   1   1.9e-11   1.8e-08   33.6   0.1    15   223    33   226    23   236 0.77 Rad51
KaiC                 PF06745.8    227 sp|P16971|RECA_BACSU -            348   6.6e-08   31.9   2.5   1   1   6.2e-10   5.7e-07   28.8   0.6     2   162    39   195    38   251 0.76 KaiC
AAA_25               PF13481.1    194 sp|P16971|RECA_BACSU -            348   1.5e-05   24.5   0.5   1   1   9.2e-08   8.6e-05   22.0   0.5    28   158    52   152    25   181 0.74 AAA domain
Arch_ATPase          PF01637.13   234 sp|P16971|RECA_BACSU -            348   0.00034   20.3   0.0   1   1   7.4e-07   0.00069   19.3   0.0    21   122    58   188    53   202 0.67 Archaeal ATPase
CobU                 PF02283.11   167 sp|P16971|RECA_BACSU -            348    0.0017   17.7   0.0   1   1   3.2e-06     0.003   17.0   0.0     3   118    62   188    60   205 0.81 Cobinamide kinase / cobinamide phosphate guanyltransferase
AAA_24               PF13479.1    213 sp|P16971|RECA_BACSU -            348     0.002   17.7   0.0   1   1   4.2e-06    0.0039   16.8   0.0     8    79    62   146    56   149 0.75 AAA domain
AAA                  PF00004.24   132 sp|P16971|RECA_BACSU -            348     0.015   15.5   0.1   1   1   3.5e-05     0.032   14.4   0.1     3   106    62   188    60   197 0.59 ATPase family associated with various cellular activities (AAA)
AAA_19               PF13245.1     76 sp|P16971|RECA_BACSU -            348     0.017   14.8   0.0   1   1   6.5e-05      0.06   13.0   0.0    15    62    62   130    54   148 0.71 Part of AAA domain
AAA_16               PF13191.1    185 sp|P16971|RECA_BACSU -            348     0.019   14.9   0.1   1   1   3.6e-05     0.034   14.1   0.1    22   141    55   176    44   198 0.56 AAA ATPase domain
AAA_35               PF14516.1    331 sp|P16971|RECA_BACSU -            348     0.023   13.3   0.0   1   1   4.8e-05     0.045   12.3   0.0    30    72    56    98    54   115 0.90 AAA-like domain
ABC_tran             PF00005.22   137 sp|P16971|RECA_BACSU -            348     0.026   14.8   0.4   1   1   0.00025      0.23   11.7   0.0    10    80    56   145    53   250 0.69 ABC transporter
AAA_22               PF13401.1    131 sp|P16971|RECA_BACSU -            348     0.067   13.3   0.1   1   1   0.00026      0.24   11.5   0.0     5    99    58   147    54   192 0.76 AAA domain
MobB                 PF03205.9    140 sp|P16971|RECA_BACSU -            348     0.084   12.5   0.0   1   2   0.00074      0.68    9.6   0.0     2    38    59    94    58   100 0.84 Molybdopterin guanine dinucleotide synthesis protein B
PT-HINT              PF07591.6    130 sp|P16971|RECA_BACSU -            348      0.11   12.3   0.0   1   1   0.00029      0.27   11.1   0.0    35    97   185   249   153   257 0.80 Pretoxin HINT domain
AAA_30               PF13604.1    196 sp|O34481|RECDL_BACSU -            798   5.6e-45  153.3   0.0   1   1   1.6e-47   9.8e-45  152.5   0.0     2   195   346   554   345   555 0.94 AAA domain
HHH_4                PF14490.1     94 sp|O34481|RECDL_BACSU -            798   2.1e-35  120.3   0.0   2   2   8.5e-35   5.3e-32  109.4   0.0     2    94   155   248   154   248 0.98 Helix-hairpin-helix containing domain
UvrD_C_2             PF13538.1    104 sp|O34481|RECDL_BACSU -            798   3.8e-26   91.2   0.0   1   1   2.3e-28   1.4e-25   89.3   0.0     2   104   620   729   619   729 0.85 UvrD-like helicase C-terminal domain
AAA_19               PF13245.1     76 sp|O34481|RECDL_BACSU -            798   1.4e-22   79.1   0.1   1   1   5.7e-25   3.5e-22   77.9   0.1     1    76   352   433   352   433 0.96 Part of AAA domain
Viral_helicase1      PF01443.13   234 sp|O34481|RECDL_BACSU -            798   1.8e-09   37.5   0.5   1   2   8.5e-05     0.053   13.0   0.4     3   115   365   503   363   523 0.70 Viral (Superfamily 1) RNA helicase
Viral_helicase1      PF01443.13   234 sp|O34481|RECDL_BACSU -            798   1.8e-09   37.5   0.5   2   2   2.9e-06    0.0018   17.8   0.0   158   233   659   729   609   730 0.73 Viral (Superfamily 1) RNA helicase
AAA_11               PF13086.1    236 sp|O34481|RECDL_BACSU -            798   2.1e-09   37.3   0.5   1   2     3e-08   1.9e-05   24.3   0.0     2    61   346   410   345   424 0.71 AAA domain
AAA_11               PF13086.1    236 sp|O34481|RECDL_BACSU -            798   2.1e-09   37.3   0.5   2   2   0.00081       0.5    9.8   0.1   194   231   452   491   438   493 0.73 AAA domain
AAA_22               PF13401.1    131 sp|O34481|RECDL_BACSU -            798   5.1e-05   23.4   0.0   1   1   2.7e-07   0.00017   21.7   0.0     4   125   360   486   355   492 0.63 AAA domain
UvrD_C               PF13361.1    351 sp|O34481|RECDL_BACSU -            798   0.00014   21.4   1.8   2   2   3.1e-06    0.0019   17.7   0.1   292   348   686   730   681   733 0.87 UvrD-like helicase C-terminal domain
HHH_5                PF14520.1     60 sp|O34481|RECDL_BACSU -            798   0.00018   21.6   0.6   1   2     4e-05     0.025   14.7   0.5     2    58    97   155    96   157 0.81 Helix-hairpin-helix domain
AAA_12               PF13087.1    200 sp|O34481|RECDL_BACSU -            798   0.00026   20.4   0.0   1   1     1e-06   0.00063   19.1   0.0    84   199   626   732   555   733 0.82 AAA domain
AAA_16               PF13191.1    185 sp|O34481|RECDL_BACSU -            798    0.0012   18.8   0.0   1   1   7.1e-06    0.0044   17.0   0.0    19    55   355   391   350   422 0.83 AAA ATPase domain
UvrD-helicase        PF00580.16   315 sp|O34481|RECDL_BACSU -            798    0.0035   16.6   0.4   1   2   0.00013     0.083   12.1   0.0     3    31   348   378   346   420 0.77 UvrD/REP helicase N-terminal domain
T2SE                 PF00437.15   272 sp|O34481|RECDL_BACSU -            798    0.0066   15.3   0.0   1   1   2.4e-05     0.015   14.2   0.0   107   149   344   381   308   387 0.83 Type II/IV secretion system protein
DUF3502              PF12010.3    134 sp|O34481|RECDL_BACSU -            798     0.016   15.1   0.1   1   1   8.4e-05     0.052   13.5   0.1    49   122    62   134    53   140 0.86 Domain of unknown function (DUF3502)
AAA                  PF00004.24   132 sp|O34481|RECDL_BACSU -            798     0.017   15.3   0.1   1   1   7.1e-05     0.044   13.9   0.1     1    21   363   383   363   409 0.87 ATPase family associated with various cellular activities (AAA)
AAA_17               PF13207.1    121 sp|O34481|RECDL_BACSU -            798     0.018   15.8   0.7   1   1   0.00017      0.11   13.3   0.4     3    32   364   394   362   488 0.85 AAA domain
AAA_28               PF13521.1    163 sp|O34481|RECDL_BACSU -            798     0.025   14.5   0.8   1   1   0.00011     0.071   13.0   0.2     3    19   364   380   362   396 0.86 AAA domain
UPF0079              PF02367.12   123 sp|O34481|RECDL_BACSU -            798     0.038   13.6   0.0   1   1   0.00022      0.14   11.8   0.0    12    41   357   386   349   394 0.83 Uncharacterised P-loop hydrolase UPF0079
Zeta_toxin           PF06414.7    201 sp|O34481|RECDL_BACSU -            798     0.039   13.0   0.1   1   1   0.00028      0.17   10.9   0.0    16    55   361   399   347   411 0.81 Zeta toxin
NTPase_1             PF03266.10   168 sp|O34481|RECDL_BACSU -            798     0.039   13.6   0.6   1   1   0.00018      0.11   12.1   0.2     2    22   363   383   362   392 0.88 NTPase
AAA_29               PF13555.1     62 sp|O34481|RECDL_BACSU -            798      0.14   11.6   0.1   1   1   0.00059      0.37   10.3   0.1    21    43   358   380   349   385 0.79 P-loop containing region of AAA domain
AAA_18               PF13238.1    129 sp|O34481|RECDL_BACSU -            798      0.33   11.2   4.5   1   1    0.0011       0.7   10.2   1.2     2    21   364   383   363   404 0.79 AAA domain
SMC_N                PF02463.14   220 sp|P05651|RECF_BACSU -            370   2.5e-19   69.3   0.3   1   1   2.7e-22     4e-19   68.7   0.3     1   214     2   363     2   368 0.89 RecF/RecN/SMC N terminal domain
AAA_23               PF13476.1    202 sp|P05651|RECF_BACSU -            370   1.5e-12   48.2   0.5   1   1   1.4e-15   2.1e-12   47.7   0.5     2   156     6   185     5   324 0.65 AAA domain
AAA_15               PF13175.1    415 sp|P05651|RECF_BACSU -            370     2e-08   33.7   0.9   1   1   2.1e-11   3.2e-08   33.0   0.9     1    56     3    57     3   119 0.74 AAA ATPase domain
AAA_21               PF13304.1    303 sp|P05651|RECF_BACSU -            370   1.1e-07   32.0   0.1   1   2   4.8e-09   7.2e-06   26.1   0.0     1    38    25    60    25   107 0.77 AAA domain
DUF2813              PF11398.3    373 sp|P05651|RECF_BACSU -            370   0.00015   20.9   0.9   1   1   2.7e-07    0.0004   19.5   0.0     1    45     1    46     1    59 0.88 Protein of unknown function (DUF2813)
AAA_29               PF13555.1     62 sp|P05651|RECF_BACSU -            370    0.0018   17.7   0.0   1   1   2.6e-06    0.0039   16.6   0.0     3    54     5    54     3    58 0.80 P-loop containing region of AAA domain
AAA_13               PF13166.1    712 sp|P05651|RECF_BACSU -            370     0.011   14.2   0.3   1   2   3.8e-05     0.057   11.8   0.1     4    53    10    60     7    79 0.80 AAA domain
ABC_tran             PF00005.22   137 sp|P05651|RECF_BACSU -            370     0.026   14.8   1.1   1   1     5e-05     0.073   13.3   1.1    11    77    23    88    15   300 0.83 ABC transporter
Ecotin               PF03974.8    128 sp|P05651|RECF_BACSU -            370     0.044   13.5   0.2   1   1   6.4e-05     0.094   12.4   0.2    29   120    22   123     4   124 0.77 Ecotin
DUF2019              PF09450.5    106 sp|P05651|RECF_BACSU -            370     0.045   13.6   0.5   1   2   0.00027       0.4   10.5   0.4     6    56   132   182   127   202 0.87 Domain of unknown function (DUF2019)
DEAD                 PF00270.24   169 sp|O34942|RECG_BACSU -            682   7.8e-24   84.0   0.2   1   2   6.1e-25   8.2e-22   77.4   0.1     3   164   260   417   258   421 0.82 DEAD/DEAH box helicase
Helicase_C           PF00271.26    78 sp|O34942|RECG_BACSU -            682   4.8e-19   67.9   0.1   1   2   9.2e-05      0.12   12.2   0.0     3    42   329   368   327   371 0.92 Helicase conserved C-terminal domain
Helicase_C           PF00271.26    78 sp|O34942|RECG_BACSU -            682   4.8e-19   67.9   0.1   2   2   1.6e-17   2.1e-14   53.1   0.1     8    77   502   572   498   573 0.95 Helicase conserved C-terminal domain
ResIII               PF04851.10   184 sp|O34942|RECG_BACSU -            682   1.6e-07   31.3   0.0   1   1   4.9e-10   6.6e-07   29.3   0.0     3   182   256   414   254   416 0.70 Type III restriction enzyme, res subunit
SecA_DEAD            PF07517.9    266 sp|O34942|RECG_BACSU -            682   1.7e-05   24.2   0.0   1   1   2.1e-08   2.8e-05   23.5   0.0    93   173   280   366   206   437 0.77 SecA DEAD-like domain
tRNA_anti-codon      PF01336.20    75 sp|O34942|RECG_BACSU -            682   0.00045   20.0   0.0   1   1     8e-07    0.0011   18.8   0.0     1    67    59   127    59   132 0.93 OB-fold nucleic acid binding domain
HHH_5                PF14520.1     60 sp|O34942|RECG_BACSU -            682    0.0017   18.4   0.0   1   1   3.8e-06    0.0051   16.9   0.0     8    34    10    36     7    66 0.79 Helix-hairpin-helix domain
Cdd1                 PF11731.3     93 sp|O34942|RECG_BACSU -            682    0.0018   18.1   0.0   1   1   5.1e-06    0.0069   16.2   0.0     8    60     3    56     1    60 0.79 Pathogenicity locus
AAA_19               PF13245.1     76 sp|O34942|RECG_BACSU -            682     0.017   14.8   0.0   1   1   3.6e-05     0.048   13.4   0.0    14    50   281   313   257   364 0.75 Part of AAA domain
TfoX_C               PF04994.8     81 sp|O34942|RECG_BACSU -            682      0.03   14.2   0.1   1   1   9.7e-05      0.13   12.1   0.0     2    32     6    36     5    39 0.92 TfoX C-terminal domain
IMS_HHH              PF11798.3     32 sp|O34942|RECG_BACSU -            682     0.037   14.0   0.2   1   1   0.00017      0.23   11.5   0.0    12    32     8    28     5    28 0.92 IMS family HHH motif
SNF2_N               PF00176.18   299 sp|O34942|RECG_BACSU -            682     0.046   12.5   0.0   1   1   6.2e-05     0.083   11.6   0.0    27   178   279   420   258   428 0.71 SNF2 family N-terminal domain
ssDNA-exonuc_C       PF10141.4    195 sp|O32044|RECJ_BACSU -            786     6e-71  238.0   0.1   1   1   4.6e-74   1.1e-70  237.1   0.1     1   195   566   769   566   769 0.99 Single-strand DNA-specific exonuclease, C terminal domain
DHH                  PF01368.15   145 sp|O32044|RECJ_BACSU -            786   2.1e-25   89.0   0.0   1   1   1.4e-28   3.5e-25   88.3   0.0     2   145    77   227    76   227 0.92 DHH family
DHHA1                PF02272.14    68 sp|O32044|RECJ_BACSU -            786     4e-15   55.2   0.0   1   1   3.7e-18   9.1e-15   54.1   0.0     2    68   371   436   370   436 0.96 DHHA1 domain
tRNA_anti-codon      PF01336.20    75 sp|O32044|RECJ_BACSU -            786   0.00049   19.9   0.0   1   1   4.7e-07    0.0012   18.6   0.0     7    70   495   558   492   562 0.86 OB-fold nucleic acid binding domain
PGM_PMM_II           PF02879.11   104 sp|O32044|RECJ_BACSU -            786    0.0058   16.9   0.5   2   2   5.6e-05      0.14   12.5   0.0    11    63   130   181   126   209 0.84 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II
Toprim               PF01751.17   100 sp|O32044|RECJ_BACSU -            786     0.058   13.3   0.0   1   1     7e-05      0.17   11.8   0.0    43    88    58   108    14   116 0.78 Toprim domain
AAA_23               PF13476.1    202 sp|P17894|RECN_BACSU -            576   1.5e-22   80.9  17.1   1   2     8e-25   5.4e-22   79.1   4.2     2   199     5   232     4   238 0.69 AAA domain
SMC_N                PF02463.14   220 sp|P17894|RECN_BACSU -            576   4.8e-14   52.1   7.8   1   1   3.9e-16   2.6e-13   49.7   7.8     1   213     1   522     1   529 0.91 RecF/RecN/SMC N terminal domain
AAA_21               PF13304.1    303 sp|P17894|RECN_BACSU -            576   9.9e-08   32.2   7.3   1   2   2.6e-05     0.017   15.0   0.1     1    25    24    52    24    71 0.79 AAA domain
AAA_21               PF13304.1    303 sp|P17894|RECN_BACSU -            576   9.9e-08   32.2   7.3   2   2   9.1e-06    0.0062   16.5   4.1   164   299   277   508   134   511 0.73 AAA domain
AAA_29               PF13555.1     62 sp|P17894|RECN_BACSU -            576     7e-07   28.6   0.0   1   1   2.2e-09   1.5e-06   27.6   0.0     3    54     4    53     2    61 0.77 P-loop containing region of AAA domain
AAA_15               PF13175.1    415 sp|P17894|RECN_BACSU -            576    0.0067   15.5  19.6   1   1   0.00015       0.1   11.6  17.2     2   115     3   160     2   353 0.57 AAA ATPase domain
MutS_V               PF00488.16   235 sp|P17894|RECN_BACSU -            576    0.0083   15.5   0.7   2   2   0.00037      0.25   10.7   0.2   110   179   455   521   446   574 0.78 MutS domain V
DUF258               PF03193.11   161 sp|P17894|RECN_BACSU -            576    0.0097   15.0   0.7   1   1   6.8e-05     0.046   12.9   0.1    18    55     5    42     2    52 0.89 Protein of unknown function, DUF258
AAA_19               PF13245.1     76 sp|P17894|RECN_BACSU -            576      0.03   14.0   0.0   1   1   0.00014     0.097   12.4   0.0     8    35    19    46    11    72 0.82 Part of AAA domain
ABC_tran             PF00005.22   137 sp|P17894|RECN_BACSU -            576     0.065   13.5   0.1   1   1   9.6e-05     0.065   13.5   0.1     4    34    16    45    13    64 0.83 ABC transporter
AAA_22               PF13401.1    131 sp|P17894|RECN_BACSU -            576     0.098   12.7   0.8   1   1    0.0013       0.9    9.6   0.2     3    22    21    40    17    48 0.87 AAA domain
Prominin             PF05478.6    807 sp|P17894|RECN_BACSU -            576      0.12    9.8   7.1   2   2   0.00057      0.38    8.2   0.3   171   228   308   363   300   390 0.83 Prominin
Allexi_40kDa         PF05549.6    271 sp|P17894|RECN_BACSU -            576      0.23   10.7   9.9   2   2   0.00015       0.1   11.8   0.7    68   142   294   366   271   395 0.81 Allexivirus 40kDa protein
Baculo_PEP_C         PF04513.7    140 sp|P17894|RECN_BACSU -            576      0.72    9.6   8.7   3   3   0.00095      0.64    9.8   0.2    40   107   299   371   277   380 0.86 Baculovirus polyhedron envelope protein, PEP, C terminus
YkyA                 PF10368.4    204 sp|P17894|RECN_BACSU -            576      0.72    9.1  23.1   2   2   0.00067      0.45    9.8   5.7    58   134   318   394   279   404 0.87 Putative cell-wall binding lipoprotein
DUF4164              PF13747.1     89 sp|P17894|RECN_BACSU -            576       1.1    9.3  16.8   2   3   0.00092      0.62   10.2   1.3     6    72   278   351   273   354 0.81 Domain of unknown function (DUF4164)
RecO_C               PF02565.10   118 sp|P42095|RECO_BACSU -            255   3.4e-27   94.6   0.0   1   1   1.2e-30   4.4e-27   94.2   0.0     1   117    82   237    82   238 0.99 Recombination protein O C terminal
RecO_N               PF11967.3     80 sp|P42095|RECO_BACSU -            255   4.6e-27   93.6   0.1   1   1   2.4e-30   8.8e-27   92.7   0.1     1    78     1    76     1    78 0.96 Recombination protein O N terminal
RecO_N_2             PF13114.1     71 sp|P42095|RECO_BACSU -            255   3.5e-12   45.8   0.0   1   1   3.1e-15   1.2e-11   44.1   0.0     2    66     6    75     5    79 0.95 RecO N terminal
DUF4428              PF14471.1     51 sp|P42095|RECO_BACSU -            255     0.049   13.3   0.4   2   2   8.7e-05      0.32   10.7   0.2     2    29   152   179   151   189 0.77 Domain of unknown function (DUF4428)
RQC                  PF09382.5    106 sp|O34748|RECQ_BACSU -            591   1.6e-27   95.3   0.1   2   2   6.9e-30   1.5e-26   92.2   0.0     1   104   405   506   405   508 0.98 RQC domain
HRDC                 PF00570.18    68 sp|O34748|RECQ_BACSU -            591   1.3e-22   79.2   0.1   1   1   2.4e-25   5.1e-22   77.3   0.0     3    68   518   583   516   583 0.97 HRDC domain
DEAD                 PF00270.24   169 sp|O34748|RECQ_BACSU -            591   1.2e-19   70.4   0.0   1   2   3.2e-21   6.9e-18   64.7   0.0     3   166    21   182    19   185 0.84 DEAD/DEAH box helicase
Helicase_C           PF00271.26    78 sp|O34748|RECQ_BACSU -            591   4.5e-19   68.0   0.1   2   2   1.9e-20     4e-17   61.8   0.1     2    78   249   325   248   325 0.97 Helicase conserved C-terminal domain
ResIII               PF04851.10   184 sp|O34748|RECQ_BACSU -            591   1.3e-06   28.3   0.1   1   1   2.6e-09   5.4e-06   26.3   0.0     3   181    17   177    16   182 0.77 Type III restriction enzyme, res subunit
Helicase_Sgs1        PF11408.3     80 sp|O34748|RECQ_BACSU -            591    0.0024   17.6   0.0   1   1   2.8e-06     0.006   16.3   0.0     8    65   519   576   513   584 0.91 Sgs1 RecQ helicase
HHH                  PF00633.18    30 sp|O34748|RECQ_BACSU -            591     0.047   13.4   0.0   1   1   5.5e-05      0.12   12.1   0.0     4    23   552   571   549   574 0.86 Helix-hairpin-helix motif
Toprim_4             PF13662.1     81 sp|P24277|RECR_BACSU -            198   2.5e-24   85.0   0.0   1   1   1.6e-27     4e-24   84.4   0.0     2    81    81   171    80   171 0.96 Toprim domain
RecR                 PF02132.10    41 sp|P24277|RECR_BACSU -            198   2.3e-17   62.1   1.0   1   1   1.9e-20   4.6e-17   61.1   1.0     2    41    39    78    38    78 0.96 RecR protein
Toprim               PF01751.17   100 sp|P24277|RECR_BACSU -            198   3.6e-08   33.3   0.0   2   2   2.5e-10   6.1e-07   29.3   0.0     2    90    82   166    81   173 0.90 Toprim domain
HHH                  PF00633.18    30 sp|P24277|RECR_BACSU -            198     0.001   18.6   0.3   1   1   1.1e-06    0.0028   17.2   0.0    10    24    11    25     7    28 0.91 Helix-hairpin-helix motif
HHH_5                PF14520.1     60 sp|P24277|RECR_BACSU -            198    0.0049   17.0   0.1   1   1   6.7e-06     0.017   15.3   0.1     3    22    10    29     8   124 0.86 Helix-hairpin-helix domain
HHH_8                PF14716.1     68 sp|P24277|RECR_BACSU -            198      0.03   14.5   0.0   1   1   2.6e-05     0.064   13.4   0.0    38    64     3    29     1    32 0.84 Helix-hairpin-helix domain
DEAD                 PF00270.24   169 sp|P50729|RECS_BACSU -            496   1.3e-23   83.3   0.0   1   2   8.9e-26   2.2e-22   79.3   0.0     3   167    20   180    18   182 0.90 DEAD/DEAH box helicase
Helicase_C           PF00271.26    78 sp|P50729|RECS_BACSU -            496   4.9e-19   67.9   0.1   2   2   2.3e-21   5.7e-18   64.5   0.0     8    78   254   324   248   324 0.95 Helicase conserved C-terminal domain
SNF2_N               PF00176.18   299 sp|P50729|RECS_BACSU -            496   0.00012   21.0   0.0   1   1   7.5e-08   0.00018   20.3   0.0    61   188    59   190     9   253 0.73 SNF2 family N-terminal domain
ResIII               PF04851.10   184 sp|P50729|RECS_BACSU -            496    0.0056   16.5   0.0   1   2   2.5e-05     0.063   13.1   0.0     4   181    17   173    14   176 0.63 Type III restriction enzyme, res subunit
AAA_30               PF13604.1    196 sp|P50729|RECS_BACSU -            496     0.013   15.1   0.0   1   2   4.8e-05      0.12   11.9   0.0     2   108    17   144    16   147 0.81 AAA domain
Fapy_DNA_glyco       PF01149.19   116 sp|P50729|RECS_BACSU -            496      0.12   12.7   0.0   1   1   9.6e-05      0.24   11.7   0.0    48   107   315   425   285   433 0.77 Formamidopyrimidine-DNA glycosylase N-terminal domain
RecU                 PF03838.9    165 sp|P39792|RECU_BACSU -            206   1.5e-72  242.5   3.7   1   1   2.3e-76   1.7e-72  242.3   3.7     1   165    30   196    30   196 0.99 Recombination protein U
DAP                  PF15228.1     97 sp|P39792|RECU_BACSU -            206      0.71   10.6   4.2   1   2   6.7e-05       0.5   11.1   0.4    39    79    24    61     5    84 0.70 Death-associated protein
RecX                 PF02631.11   122 sp|O31575|RECX_BACSU -            264   9.8e-38  129.1   8.6   1   2   4.3e-35   2.1e-31  108.6   2.1     1   119    84   208    84   212 0.93 RecX family
RecX                 PF02631.11   122 sp|O31575|RECX_BACSU -            264   9.8e-38  129.1   8.6   2   2   2.4e-09   1.2e-05   25.5   0.9    66   119   209   262   202   264 0.84 RecX family
DUF4284              PF14112.1    122 sp|O31575|RECX_BACSU -            264   0.00011   22.6   1.8   1   2   2.2e-08   0.00011   22.6   1.8     8    89    10    90     7   118 0.84 Domain of unknown function (DUF4284)
DUF494               PF04361.8    155 sp|O31575|RECX_BACSU -            264    0.0069   16.0   2.2   2   2   0.00016       0.8    9.3   1.3    23    87   181   245   164   248 0.77 Protein of unknown function (DUF494)
HD_4                 PF13328.1    153 sp|O54408|RELA_BACSU -            734   5.8e-52  175.4   0.4   1   1   4.3e-55   5.8e-52  175.4   0.4     1   152    31   180    31   181 0.98 HD domain
RelA_SpoT            PF04607.12   116 sp|O54408|RELA_BACSU -            734   1.3e-41  141.2   2.5   1   2   4.2e-44   5.7e-41  139.1   0.0     1   115   240   350   240   351 0.98 Region found in RelA / SpoT proteins
TGS                  PF02824.16    60 sp|O54408|RELA_BACSU -            734   5.1e-24   83.8   0.0   1   1   1.1e-26   1.5e-23   82.4   0.0     1    60   394   453   394   453 0.99 TGS domain
ACT_4                PF13291.1     80 sp|O54408|RELA_BACSU -            734   6.2e-21   74.5   4.5   1   1   1.3e-23   1.8e-20   73.0   4.5     2    80   654   731   653   731 0.97 ACT domain
HD                   PF01966.17   122 sp|O54408|RELA_BACSU -            734   3.4e-10   39.9   0.4   1   2   2.5e-13   3.4e-10   39.9   0.4     1   122    50   149    50   149 0.92 HD domain
ACT                  PF01842.20    66 sp|O54408|RELA_BACSU -            734   2.2e-08   33.4   0.3   1   1   4.1e-11   5.6e-08   32.1   0.3     2    65   660   724   659   725 0.97 ACT domain
ThiS                 PF02597.15    77 sp|O54408|RELA_BACSU -            734     0.014   15.8   0.0   1   1   8.1e-05      0.11   12.9   0.0    41    72   425   453   403   454 0.89 ThiS family
DNA_pol3_gamma3      PF12169.3    143 sp|O54408|RELA_BACSU -            734     0.026   14.2   0.2   1   2   0.00024      0.32   10.7   0.1    33    96   121   183   112   187 0.83 DNA polymerase III subunits gamma and tau domain III
Ub-Mut7C             PF14451.1     81 sp|O54408|RELA_BACSU -            734      0.05   13.1   0.5   1   1   0.00017      0.23   11.0   0.0    53    78   431   456   420   458 0.85 Mut7-C ubiquitin
LHH                  PF14411.1     82 sp|O54408|RELA_BACSU -            734     0.064   13.4   0.2   1   1    0.0002      0.26   11.5   0.2    15    71   432   487   422   490 0.80 A nuclease of the HNH/ENDO VII superfamily with conserved LHH
AhpC-TSA             PF00578.16   124 sp|P35160|RESA_BACSU -            179     6e-35  119.6   0.0   1   1   5.3e-38   7.2e-35  119.3   0.0     2   123    39   154    38   155 0.96 AhpC/TSA family
Redoxin              PF08534.5    146 sp|P35160|RESA_BACSU -            179   1.7e-30  105.5   0.0   1   1   1.4e-33   1.9e-30  105.3   0.0     2   139    38   165    37   172 0.95 Redoxin
Thioredoxin_8        PF13905.1     95 sp|P35160|RESA_BACSU -            179   3.2e-16   59.2   0.0   1   1   3.7e-19   4.9e-16   58.6   0.0     2    95    63   152    62   152 0.96 Thioredoxin-like
Thioredoxin_2        PF13098.1    112 sp|P35160|RESA_BACSU -            179   5.3e-13   49.1   0.0   1   1   1.3e-15   1.7e-12   47.5   0.0     4   110    61   167    58   169 0.90 Thioredoxin-like domain
Thioredoxin          PF00085.15   104 sp|P35160|RESA_BACSU -            179   1.3e-09   37.6   0.2   1   2   5.4e-09   7.3e-06   25.6   0.1    18    66    62   111    46   125 0.86 Thioredoxin
Thioredoxin          PF00085.15   104 sp|P35160|RESA_BACSU -            179   1.3e-09   37.6   0.2   2   2   0.00023      0.31   10.7   0.0    59   101   126   169   111   171 0.77 Thioredoxin
SCO1-SenC            PF02630.9    174 sp|P35160|RESA_BACSU -            179   2.4e-05   24.0   0.0   1   2   9.5e-07    0.0013   18.4   0.0    13    92    26   101    13   121 0.78 SCO1/SenC
AhpC-TSA_2           PF13911.1    115 sp|P35160|RESA_BACSU -            179    0.0048   16.8   0.0   1   1   6.2e-06    0.0084   16.0   0.0     5    55    87   138    84   178 0.76 AhpC/TSA antioxidant enzyme
TraF                 PF13728.1    215 sp|P35160|RESA_BACSU -            179     0.018   14.5   0.0   1   1     2e-05     0.027   13.9   0.0   114   211    56   166    39   169 0.71 F plasmid transfer operon protein
GSHPx                PF00255.14   108 sp|P35160|RESA_BACSU -            179     0.018   14.3   0.0   1   1   2.2e-05      0.03   13.6   0.0     4    59    45   101    43   124 0.93 Glutathione peroxidase
Thioredoxin_7        PF13899.1     82 sp|P35160|RESA_BACSU -            179     0.027   14.4   0.2   1   1   4.2e-05     0.056   13.4   0.2    16    77    61   124    53   128 0.77 Thioredoxin-like
YtfJ_HI0045          PF09695.5    160 sp|P35160|RESA_BACSU -            179     0.057   12.7   0.0   1   1   5.8e-05     0.079   12.2   0.0   107   158   123   173    85   175 0.83 Bacterial protein of unknown function (YtfJ_HI0045)
Cytochrom_C_asm      PF01578.15   214 sp|P35162|RESC_BACSU -            391   5.6e-34  117.5  33.8   2   2   1.1e-36   1.6e-32  112.8  29.3    13   214    83   388    71   388 0.87 Cytochrome C assembly protein
CoA_binding          PF02629.14    96 sp|O05521|REX_BACSU  -            215   1.1e-29  102.8   0.2   1   1   5.2e-33   1.5e-29  102.3   0.2     1    95    83   178    83   179 0.98 CoA binding domain
Put_DNA-bind_N       PF06971.8     50 sp|O05521|REX_BACSU  -            215   1.7e-25   88.4   0.9   1   1   9.7e-29   2.9e-25   87.7   0.4     2    50     7    55     6    55 0.99 Putative DNA-binding protein N-terminus
HTH_DeoR             PF08220.7     57 sp|O05521|REX_BACSU  -            215    0.0059   16.1   0.0   1   1   3.8e-06     0.011   15.2   0.0    13    49    32    66    22    68 0.83 DeoR-like helix-turn-helix domain
HTH_11               PF08279.7     55 sp|O05521|REX_BACSU  -            215      0.02   14.5   0.0   1   1   1.3e-05     0.039   13.6   0.0     6    36    23    54    20    67 0.86 HTH domain
GFO_IDH_MocA         PF01408.17   120 sp|O05521|REX_BACSU  -            215     0.095   13.2   0.0   1   1   5.1e-05      0.15   12.5   0.0     3    87    88   170    86   175 0.78 Oxidoreductase family, NAD-binding Rossmann fold
RF-1                 PF00472.15   114 sp|P45872|RF1_BACSU  -            356   1.3e-40  137.7   0.7   3   3   6.9e-44   1.3e-40  137.7   0.7     3   114   208   319   206   319 0.98 RF-1 domain
PCRF                 PF03462.13   116 sp|P45872|RF1_BACSU  -            356   2.2e-38  130.5   1.8   1   1   1.2e-41   2.2e-38  130.5   1.8     3   116    64   177    62   177 0.98 PCRF domain
MIR                  PF02815.14   190 sp|P45872|RF1_BACSU  -            356    0.0076   15.8   0.1   1   1   9.4e-06     0.017   14.6   0.1    68   140   239   308   181   341 0.67 MIR domain
V_ATPase_I           PF01496.14   759 sp|P45872|RF1_BACSU  -            356       1.8    6.3   5.0   1   2   9.5e-05      0.18    9.6   0.9    40   172     5   140     1   193 0.65 V-type ATPase 116kDa subunit family
IncA                 PF04156.9    191 sp|P45872|RF1_BACSU  -            356       2.6    7.6  12.8   1   3   0.00046      0.86    9.1   2.1   130   184     3    65     2    74 0.83 IncA protein
OmpH                 PF03938.9    158 sp|P45872|RF1_BACSU  -            356       3.3    7.6  13.7   1   2   0.00036      0.67    9.8   5.0    23    77    40    95    38    99 0.93 Outer membrane protein (OmpH-like)
RF-1                 PF00472.15   114 sp|P28367|RF2_BACSU  -            366   2.1e-41  140.2   0.9   1   1   1.1e-44   4.2e-41  139.3   0.9     3   114   226   337   224   337 0.98 RF-1 domain
PCRF                 PF03462.13   116 sp|P28367|RF2_BACSU  -            366     3e-37  126.8   1.5   1   1   1.5e-40   5.7e-37  125.9   0.0     4   116    86   194    83   194 0.98 PCRF domain
QueF                 PF14489.1     81 sp|P28367|RF2_BACSU  -            366     0.014   15.3   0.0   1   1     1e-05     0.038   13.9   0.0    15    40    55    80    50    95 0.82 QueF-like protein
MIR                  PF02815.14   190 sp|P28367|RF2_BACSU  -            366     0.027   14.0   0.1   1   1   1.6e-05     0.058   12.9   0.1   118   175   238   293   183   307 0.65 MIR domain
NTP_transferase      PF00483.18   248 sp|O06486|RFBF_BACSU -            254   1.5e-16   60.4   0.0   1   1   3.8e-20   1.9e-16   60.1   0.0     1   244     2   243     2   247 0.85 Nucleotidyl transferase
NTP_transf_3         PF12804.2    160 sp|O06486|RFBF_BACSU -            254   1.6e-08   34.7   0.0   1   1   5.1e-12   2.5e-08   34.1   0.0     1    60     3    69     3    90 0.87 MobA-like NTP transferase domain
IspD                 PF01128.14   221 sp|O06486|RFBF_BACSU -            254       0.1   12.1   0.0   1   1     3e-05      0.15   11.5   0.0     2    53     2    56     1    69 0.82 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase
RhaA                 PF06134.6    417 sp|O05264|RHAA_BACSU -            424  4.9e-255  845.9   0.1   1   1  7.5e-259  5.5e-255  845.8   0.1     1   417     1   417     1   417 1.00 L-rhamnose isomerase (RhaA)
FGGY_N               PF00370.16   245 sp|O05262|RHAB_BACSU -            485   2.3e-36  125.3   0.0   1   1   8.2e-40     4e-36  124.5   0.0     2   244     3   240     2   241 0.91 FGGY family of carbohydrate kinases, N-terminal domain
FGGY_C               PF02782.11   198 sp|O05262|RHAB_BACSU -            485   1.4e-19   70.5   0.0   1   1     4e-23     2e-19   70.0   0.0     1   198   250   439   250   439 0.90 FGGY family of carbohydrate kinases, C-terminal domain
DUF2600              PF10776.4    330 sp|O05262|RHAB_BACSU -            485    0.0013   17.6   0.2   1   1   4.1e-07     0.002   17.0   0.2   120   213   300   394   271   397 0.86 Protein of unknown function (DUF2600)
DUF718               PF05336.8    106 sp|O05263|RHAM_BACSU -            104   8.2e-39  131.6   3.4   1   1   6.1e-43   9.1e-39  131.5   3.4     1   106     2   104     2   104 0.99 Domain of unknown function (DUF718)
Lipase_GDSL_2        PF13472.1    179 sp|O31523|RHGT1_BACSU -            232   6.3e-17   62.2   0.0   1   1     1e-20   7.4e-17   62.0   0.0     4   176    12   201     9   204 0.83 GDSL-like Lipase/Acylhydrolase family
Lipase_GDSL          PF00657.17   234 sp|O31523|RHGT1_BACSU -            232   9.4e-12   45.2   0.0   1   1   1.5e-15   1.1e-11   45.0   0.0     2   233     9   207     8   208 0.84 GDSL-like Lipase/Acylhydrolase
Lipase_GDSL          PF00657.17   234 sp|O31528|RHGT2_BACSU -            217   2.2e-21   76.7   0.1   1   1   5.1e-25   2.5e-21   76.5   0.1     1   233     5   197     5   198 0.92 GDSL-like Lipase/Acylhydrolase
Lipase_GDSL_2        PF13472.1    179 sp|O31528|RHGT2_BACSU -            217   6.1e-19   68.8   0.0   1   1   1.5e-22   7.5e-19   68.5   0.0     4   177     9   192     7   194 0.82 GDSL-like Lipase/Acylhydrolase family
Methyltransf_1N      PF02870.10    77 sp|O31528|RHGT2_BACSU -            217    0.0033   17.9   0.0   1   1   1.2e-06    0.0058   17.1   0.0    35    75    74   114    52   116 0.78 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain
ATP-synt_ab          PF00006.20   215 sp|Q03222|RHO_BACSU  -            427   6.7e-39  133.6   0.0   1   1     7e-42   9.4e-39  133.1   0.0     3   214   158   363   156   364 0.96 ATP synthase alpha/beta family, nucleotide-binding domain
Rho_RNA_bind         PF07497.7     78 sp|Q03222|RHO_BACSU  -            427   1.6e-35  120.5   0.1   1   1   2.5e-38   3.4e-35  119.4   0.1     1    77    52   127    52   128 0.96 Rho termination factor, RNA-binding domain
Rho_N                PF07498.7     43 sp|Q03222|RHO_BACSU  -            427   3.5e-15   55.4   2.5   1   1   2.6e-18   3.5e-15   55.4   2.5     2    42     9    49     8    50 0.97 Rho termination factor, N-terminal domain
OB_RNB               PF08206.6     58 sp|Q03222|RHO_BACSU  -            427   0.00011   21.6   0.0   1   1   2.2e-07    0.0003   20.2   0.0     5    47    61   108    56   116 0.80 Ribonuclease B OB domain
AAA                  PF00004.24   132 sp|Q03222|RHO_BACSU  -            427   0.00093   19.3   0.1   1   1   2.2e-06     0.003   17.7   0.0     2    73   174   272   173   283 0.74 ATPase family associated with various cellular activities (AAA)
NACHT                PF05729.7    166 sp|Q03222|RHO_BACSU  -            427    0.0017   18.0   0.0   1   1   2.7e-06    0.0036   16.9   0.0    12    95   182   271   178   288 0.86 NACHT domain
AAA_25               PF13481.1    194 sp|Q03222|RHO_BACSU  -            427     0.002   17.5   0.0   1   1   3.7e-06     0.005   16.2   0.0    33    62   170   199   142   274 0.68 AAA domain
AAA_22               PF13401.1    131 sp|Q03222|RHO_BACSU  -            427    0.0021   18.1   0.0   1   1   5.2e-06     0.007   16.5   0.0     7    99   173   269   170   281 0.79 AAA domain
Arch_ATPase          PF01637.13   234 sp|Q03222|RHO_BACSU  -            427    0.0036   17.0   0.0   1   1   7.3e-06    0.0099   15.6   0.0    28   131   178   270   173   276 0.74 Archaeal ATPase
Mor                  PF08765.6    108 sp|Q03222|RHO_BACSU  -            427     0.091   12.5   0.1   2   2   0.00052       0.7    9.6   0.0    59    95   323   359   307   369 0.81 Mor transcription activator family
EZH2_WD-Binding      PF11616.3     30 sp|Q03222|RHO_BACSU  -            427       0.1   12.4   0.4   1   1   0.00017      0.22   11.3   0.4    16    24   411   419   404   421 0.90 WD repeat binding protein EZH2
DHBP_synthase        PF00926.14   194 sp|P17620|RIBBA_BACSU -            398   2.1e-84  281.5   0.5   1   1   3.8e-88   2.8e-84  281.1   0.5     1   194     5   197     5   197 0.99 3,4-dihydroxy-2-butanone 4-phosphate synthase
GTP_cyclohydro2      PF00925.15   169 sp|P17620|RIBBA_BACSU -            398   1.5e-80  268.3   0.0   2   2   6.6e-84   4.9e-80  266.6   0.0     1   169   204   373   204   373 0.99 GTP cyclohydrolase II
FAD_syn              PF06574.7    158 sp|P54575|RIBC_BACSU -            316   2.5e-49  166.9   0.2   1   1   6.9e-53   3.4e-49  166.4   0.2     2   157    14   168    13   169 0.97 FAD synthetase
Flavokinase          PF01687.12   125 sp|P54575|RIBC_BACSU -            316   3.9e-44  149.5   0.1   1   1   1.3e-47   6.6e-44  148.7   0.1     1   124   185   311   185   312 0.97 Riboflavin kinase
CTP_transf_2         PF01467.21   157 sp|P54575|RIBC_BACSU -            316   0.00012   22.1   0.1   1   1   2.7e-07    0.0013   18.7   0.1     2   156    23   172    22   173 0.76 Cytidylyltransferase
RibD_C               PF01872.12   200 sp|P17618|RIBD_BACSU -            361   2.3e-65  219.9   0.0   1   1     6e-69     3e-65  219.5   0.0     1   200   146   354   146   354 0.97 RibD C-terminal domain
dCMP_cyt_deam_1      PF00383.17   102 sp|P17618|RIBD_BACSU -            361   1.3e-22   79.3   0.1   1   1   4.8e-26   2.4e-22   78.5   0.1     4   101     2    98     1    99 0.93 Cytidine and deoxycytidylate deaminase zinc-binding region
Molybdopterin        PF00384.17   432 sp|P17618|RIBD_BACSU -            361      0.16   10.6   0.0   1   1   9.6e-05      0.47    9.1   0.0   186   243   133   194   125   278 0.93 Molybdopterin oxidoreductase
Flavokinase          PF01687.12   125 sp|P94465|RIBR_BACSU -            230   7.5e-37  126.0   0.1   1   1   8.6e-41   1.3e-36  125.2   0.1     8   122     4   117     2   120 0.94 Riboflavin kinase
Ribonuc_L-PSP        PF01042.16   121 sp|P37552|RIDA_BACSU -            125   1.7e-49  166.6   0.3   1   1   3.8e-53   1.9e-49  166.4   0.3     1   121     7   124     7   124 0.98 Endoribonuclease L-PSP
Eclosion             PF04736.7     62 sp|P37552|RIDA_BACSU -            125     0.084   12.3   0.0   1   1   2.8e-05      0.14   11.6   0.0    15    40    81   106    71   111 0.88 Eclosion hormone
Rab3-GTPase_cat      PF13890.1    165 sp|P37552|RIDA_BACSU -            125      0.13   11.6   0.0   1   1   2.9e-05      0.14   11.5   0.0    32    86    33    89     4    98 0.86 Rab3 GTPase-activating protein catalytic subunit
Acetyltransf_1       PF00583.19    83 sp|O05517|RIMI_BACSU -            151   6.6e-17   61.3   0.0   1   1   6.9e-20   9.3e-17   60.8   0.0     2    82    51   125    50   126 0.97 Acetyltransferase (GNAT) family
Acetyltransf_10      PF13673.1    117 sp|O05517|RIMI_BACSU -            151   9.3e-14   51.5   0.0   1   1   8.8e-17   1.2e-13   51.2   0.0    28   116    26   124    11   125 0.84 Acetyltransferase (GNAT) domain
Acetyltransf_7       PF13508.1     79 sp|O05517|RIMI_BACSU -            151     8e-12   45.1   0.0   1   1     1e-14   1.4e-11   44.3   0.0     3    78    45   126    43   127 0.84 Acetyltransferase (GNAT) domain
Acetyltransf_4       PF13420.1    155 sp|O05517|RIMI_BACSU -            151   2.1e-10   40.7   0.0   1   1   2.5e-13   3.3e-10   40.1   0.0     1   149     7   140     7   144 0.85 Acetyltransferase (GNAT) domain
Acetyltransf_8       PF13523.1    152 sp|O05517|RIMI_BACSU -            151     6e-10   39.1   0.0   1   1   1.1e-12   1.5e-09   37.9   0.0    32   139    29   128    10   134 0.83 Acetyltransferase (GNAT) domain
Acetyltransf_3       PF13302.1    142 sp|O05517|RIMI_BACSU -            151   4.1e-09   36.7   0.0   1   1   5.8e-12   7.9e-09   35.8   0.0     5   142     8   126     5   126 0.77 Acetyltransferase (GNAT) domain
Acetyltransf_9       PF13527.1    127 sp|O05517|RIMI_BACSU -            151   8.9e-07   28.8   0.0   1   1   2.2e-09     3e-06   27.0   0.0     2   123     7   124     6   128 0.81 Acetyltransferase (GNAT) domain
Acetyltransf_6       PF13480.1    142 sp|O05517|RIMI_BACSU -            151   1.1e-05   25.4   0.0   1   1     1e-08   1.4e-05   25.0   0.0    47   133    24   107     3   116 0.91 Acetyltransferase (GNAT) domain
FR47                 PF08445.5     86 sp|O05517|RIMI_BACSU -            151   2.8e-05   23.7   0.0   1   1   3.2e-08   4.3e-05   23.1   0.0    17    78    64   126    50   136 0.86 FR47-like protein
Acetyltransf_CG      PF14542.1     78 sp|O05517|RIMI_BACSU -            151     0.015   15.1   0.0   1   1   1.8e-05     0.024   14.5   0.0    23    56    69   102    44   106 0.86 GCN5-related N-acetyl-transferase
KIX                  PF02172.11    81 sp|O05517|RIMI_BACSU -            151      0.11   12.5   0.1   1   1   0.00017      0.23   11.5   0.1    33    73     5    44     2    51 0.86 KIX domain
RimM                 PF01782.13    84 sp|O31740|RIMM_BACSU -            174   8.4e-21   73.7   0.1   1   1   2.1e-24   1.6e-20   72.8   0.1     2    83     8    91     7    92 0.94 RimM N-terminal domain
PRC                  PF05239.11    79 sp|O31740|RIMM_BACSU -            174   4.4e-15   55.2   1.9   2   2     1e-18   7.7e-15   54.5   1.5     1    78    98   171    98   172 0.96 PRC-barrel domain
DUF150               PF02576.12   141 sp|P32726|RIMP_BACSU -            156   6.4e-52  174.8   0.2   1   1   4.9e-56   7.3e-52  174.7   0.2     1   141    12   152    12   152 0.99 Uncharacterised BCR, YhbC family COG0779
Ribonuc_red_lgC      PF02867.10   538 sp|P50620|RIR1_BACSU -            700  9.7e-145  483.1   8.0   1   1  3.1e-146  1.1e-142  476.3   8.0     1   537   167   684   167   685 0.95 Ribonucleotide reductase, barrel domain
RNR_N                PF08343.5     82 sp|P50620|RIR1_BACSU -            700   8.2e-30  102.4  11.3   1   1   2.2e-33   8.2e-30  102.4  11.3     1    82     9    89     9    89 0.99 Ribonucleotide reductase N-terminal
Ribonuc_red_lgN      PF00317.16    83 sp|P50620|RIR1_BACSU -            700     2e-17   62.7   0.2   1   1     2e-20   7.5e-17   60.9   0.2     2    82    91   163    90   164 0.96 Ribonucleotide reductase, all-alpha domain
Fib_succ_major       PF09603.5    184 sp|P50620|RIR1_BACSU -            700     0.063   13.7   0.0   1   1   4.1e-05      0.15   12.5   0.0    70    91   546   569   492   630 0.67 Fibrobacter succinogenes major domain (Fib_succ_major)
Ribonuc_red_sm       PF00268.16   281 sp|P50621|RIR2_BACSU -            329   1.5e-48  165.2   5.3   1   1   1.3e-52     2e-48  164.8   5.3    10   275     9   281     2   286 0.87 Ribonucleotide reductase, small chain
DMRL_synthase        PF00885.14   144 sp|P11998|RISB_BACSU -            154   8.7e-59  197.3   0.7   1   1   6.5e-63   9.7e-59  197.1   0.7     2   143    11   152    10   153 0.98 6,7-dimethyl-8-ribityllumazine synthase
Ribosomal_L10        PF00466.15   100 sp|P42923|RL10_BACSU -            166   4.8e-31  106.6   1.7   1   1     2e-34   9.8e-31  105.6   1.7     4   100     6   101     3   101 0.97 Ribosomal protein L10
DrsE                 PF02635.10   122 sp|P42923|RL10_BACSU -            166     0.022   14.8   0.0   1   1   6.8e-06     0.033   14.2   0.0    61    96    36    69    19   103 0.83 DsrE/DsrF-like family
MCE                  PF02470.15    81 sp|P42923|RL10_BACSU -            166     0.036   14.0   0.0   1   1   1.5e-05     0.072   13.1   0.0    21    53    28    58    23   111 0.85 mce related protein
Ribosomal_L11_N      PF03946.9     60 sp|Q06796|RL11_BACSU -            141   1.1e-31  108.0   0.3   1   1   2.2e-35   1.6e-31  107.5   0.3     1    60     8    66     8    66 0.97 Ribosomal protein L11, N-terminal domain
Ribosomal_L11        PF00298.14    69 sp|Q06796|RL11_BACSU -            141   2.7e-31  107.5   0.9   1   1     7e-35   5.2e-31  106.6   0.9     1    69    71   139    71   139 0.98 Ribosomal protein L11, RNA binding domain
Ribosomal_L13        PF00572.13   128 sp|P70974|RL13_BACSU -            145   1.7e-55  186.5   0.1   1   1   1.3e-59   1.9e-55  186.3   0.1     1   127    16   142    16   143 0.99 Ribosomal protein L13
Ribosomal_L14        PF00238.14   122 sp|P12875|RL14_BACSU -            122   3.8e-51  171.9   1.1   1   1   2.8e-55   4.2e-51  171.8   1.1     1   122     1   122     1   122 0.99 Ribosomal protein L14p/L23e
Ribosomal_L18e       PF00828.14   129 sp|P19946|RL15_BACSU -            146   9.5e-34  116.5   3.3   1   1   9.4e-38   1.4e-33  116.0   3.3     3   128    27   145    26   146 0.93 Ribosomal protein L18e/L15
Ribosomal_L16        PF00252.13   133 sp|P14577|RL16_BACSU -            144   9.4e-55  183.9   1.7   1   1   7.1e-59   1.1e-54  183.8   1.7     1   133     4   133     4   133 0.99 Ribosomal protein L16p/L10e
Ribosomal_L17        PF01196.14    97 sp|P20277|RL17_BACSU -            120   3.6e-41  139.6   0.5   1   1   1.5e-44   4.4e-41  139.3   0.5     1    97    16   120    16   120 0.95 Ribosomal protein L17
COMPASS-Shg1         PF05205.7    106 sp|P20277|RL17_BACSU -            120    0.0012   19.1   0.3   1   1   4.6e-07    0.0014   18.9   0.3     6    80     2    83     1   101 0.90 COMPASS (Complex proteins associated with Set1p) component shg1
EcoEI_R_C            PF08463.5    164 sp|P20277|RL17_BACSU -            120     0.018   14.9   5.1   2   2   6.2e-05      0.18   11.6   0.5     3    39    62    95    60    96 0.91 EcoEI R protein C-terminal
TC1                  PF15063.1     79 sp|P20277|RL17_BACSU -            120      0.06   12.8   0.0   1   1   3.9e-05      0.12   11.9   0.0     8    47    41    85    33    94 0.83 Thyroid cancer protein 1
HXXSHH               PF07586.6    302 sp|P20277|RL17_BACSU -            120      0.11   11.4   0.0   1   1   4.1e-05      0.12   11.2   0.0    84   153    20    94     3   103 0.75 Protein of unknown function (DUF1552)
Ribosomal_L18p       PF00861.17   119 sp|P46899|RL18_BACSU -            120   1.2e-42  144.8   2.7   1   1   9.1e-47   1.3e-42  144.7   2.7     2   119     7   120     6   120 0.96 Ribosomal L18p/L5e family
Ribosomal_L19        PF01245.15   113 sp|O31742|RL19_BACSU -            115   3.3e-50  168.6   3.1   1   1   2.5e-54   3.7e-50  168.4   3.1     2   112     3   113     2   114 0.98 Ribosomal protein L19
Ribosomal_L1         PF00687.16   220 sp|Q06797|RL1_BACSU  -            232     1e-52  178.6   0.2   1   1     4e-56   1.2e-52  178.4   0.2    13   220    28   221     3   221 0.92 Ribosomal protein L1p/L10e family
SHD1                 PF03983.7     70 sp|Q06797|RL1_BACSU  -            232   0.00035   20.1   1.9   2   2   3.2e-07   0.00094   18.7   0.2    19    66   144   191   141   194 0.92 SLA1 homology domain 1, SHD1
Dodecin              PF07311.7     66 sp|Q06797|RL1_BACSU  -            232    0.0077   16.2   2.4   1   2   0.00017      0.49   10.4   0.2    26    64    10    48     9    49 0.93 Dodecin
MRL1                 PF13003.2    134 sp|Q06797|RL1_BACSU  -            232     0.097   12.4   0.0   1   1   6.1e-05      0.18   11.6   0.0    58   134     8   146     3   146 0.86 Ribosomal protein L1
Ribosomal_L20        PF00453.13   108 sp|P55873|RL20_BACSU -            119   1.1e-49  166.7   3.8   1   1   8.9e-54   1.3e-49  166.5   3.8     2   108     3   109     2   109 0.99 Ribosomal protein L20
Ribosomal_L21p       PF00829.16    96 sp|P26908|RL21_BACSU -            102   7.7e-40  134.9   5.3   1   1   5.9e-44   8.8e-40  134.7   5.3     1    96     1    95     1    95 0.99 Ribosomal prokaryotic L21 protein
Ribosomal_L22        PF00237.14   105 sp|P42060|RL22_BACSU -            113   3.8e-41  139.2   1.0   1   1   2.9e-45   4.3e-41  139.0   1.0     1   105     5   109     5   109 0.99 Ribosomal protein L22p/L17e
Ribosomal_L23        PF00276.15    92 sp|P42924|RL23_BACSU -             95   7.9e-31  105.8   3.6   1   1   5.7e-35   8.4e-31  105.7   3.6     2    88     6    91     5    95 0.94 Ribosomal protein L23
KOW                  PF00467.24    32 sp|P0CI78|RL24_BACSU -            103   6.3e-10   38.3   0.6   1   2   4.3e-14   6.3e-10   38.3   0.6     1    32     5    36     5    36 0.98 KOW motif
Ribosomal_L27        PF01016.14    81 sp|P05657|RL27_BACSU -             94   1.2e-35  121.1   2.9   1   1   8.9e-40   1.3e-35  120.9   2.9     1    81    10    90    10    90 0.99 Ribosomal L27 protein
Ribosomal_L28        PF00830.14    61 sp|P37807|RL28_BACSU -             62   8.3e-20   70.3   3.7   1   1   6.1e-24   9.1e-20   70.2   3.7     1    57     3    57     3    61 0.96 Ribosomal L28 family
Ribosomal_L29        PF00831.18    58 sp|P12873|RL29_BACSU -             66   3.8e-27   93.7   6.7   1   1   1.4e-30   4.2e-27   93.5   6.7     1    58     3    60     3    60 0.99 Ribosomal L29 protein
Cob_adeno_trans      PF01923.13   163 sp|P12873|RL29_BACSU -             66    0.0031   17.3   0.6   1   1   1.1e-06    0.0032   17.2   0.6    48    96    11    61     2    66 0.77 Cobalamin adenosyltransferase
Phe_tRNA-synt_N      PF02912.13    73 sp|P12873|RL29_BACSU -             66     0.091   12.5   0.8   1   2   3.1e-05     0.091   12.5   0.8    44    72     2    30     1    31 0.92 Aminoacyl tRNA synthetase class II, N-terminal domain
MRP-L47              PF06984.8     87 sp|P12873|RL29_BACSU -             66     0.097   12.5   1.2   1   1   4.4e-05      0.13   12.1   1.2    63    87    36    60     2    60 0.83 Mitochondrial 39-S ribosomal protein L47 (MRP-L47)
Ribosomal_L2_C       PF03947.13   130 sp|P42919|RL2_BACSU  -            277   4.6e-59  197.8   2.9   1   1     1e-62   7.4e-59  197.2   2.9     1   130   124   253   124   253 0.99 Ribosomal Proteins L2, C-terminal domain
Ribosomal_L2         PF00181.18    77 sp|P42919|RL2_BACSU  -            277   3.7e-35  119.7   1.3   1   3     3e-38   2.2e-34  117.2   1.1     1    77    42   118    42   118 0.99 Ribosomal Proteins L2, RNA binding domain
Ribosomal_L30        PF00327.15    52 sp|P19947|RL30_BACSU -             59   1.2e-21   76.0   0.8   1   1   8.7e-26   1.3e-21   75.9   0.8     2    52     4    54     3    54 0.98 Ribosomal protein L30p/L7e
Ribosomal_L31        PF01197.13    69 sp|O34967|RL31B_BACSU -             82   1.6e-26   92.0   0.8   1   1   1.2e-30   1.8e-26   91.8   0.8     1    68     1    80     1    81 0.99 Ribosomal protein L31
Ribosomal_L31        PF01197.13    69 sp|Q03223|RL31_BACSU -             66   2.3e-30  104.4   0.3   1   1   1.7e-34   2.4e-30  104.2   0.3     1    68     1    65     1    66 0.98 Ribosomal protein L31
Ribosomal_L32p       PF01783.18    56 sp|O34687|RL32_BACSU -             59   1.7e-24   85.7   1.6   1   1   1.1e-27     2e-24   85.5   1.6     1    53     2    54     2    56 0.98 Ribosomal L32p protein family
DZR                  PF12773.2     50 sp|O34687|RL32_BACSU -             59    0.0015   18.2   0.4   1   1     1e-06    0.0019   17.9   0.4    30    50    28    47    10    54 0.74 Double zinc ribbon
zf-ribbon_3          PF13248.1     26 sp|O34687|RL32_BACSU -             59    0.0018   17.4  10.1   1   3   0.00016      0.29   10.4   0.4    13    24    24    35    21    36 0.69 zinc-ribbon domain
zf-ribbon_3          PF13248.1     26 sp|O34687|RL32_BACSU -             59    0.0018   17.4  10.1   2   3   2.6e-06    0.0048   16.0   3.8     3    24    28    48    26    50 0.91 zinc-ribbon domain
NRDD                 PF13597.1    546 sp|O34687|RL32_BACSU -             59      0.02   12.9   0.4   1   1   1.1e-05      0.02   12.9   0.4   475   514    10    50     5    58 0.78 Anaerobic ribonucleoside-triphosphate reductase
PolC_DP2             PF03833.8    900 sp|O34687|RL32_BACSU -             59     0.042   11.5   0.4   1   1   2.1e-05     0.038   11.6   0.4   654   678    26    51     6    59 0.62 DNA polymerase II large subunit DP2
GATA                 PF00320.22    36 sp|O34687|RL32_BACSU -             59      0.13   11.5   0.3   2   2   7.2e-05      0.13   11.5   0.3    19    32    40    52    35    54 0.83 GATA zinc finger
Zn-ribbon_8          PF09723.5     42 sp|O34687|RL32_BACSU -             59      0.42   10.5   5.4   1   2   0.00036      0.66    9.9   0.4    25    36    26    37    16    42 0.75 Zinc ribbon domain
Ribosomal_L33        PF00471.15    48 sp|P56849|RL331_BACSU -             49   3.6e-22   78.3   6.7   1   1   2.6e-26   3.9e-22   78.2   6.7     1    48     2    49     2    49 0.99 Ribosomal protein L33
Ribosomal_L33        PF00471.15    48 sp|Q06798|RL332_BACSU -             49   9.4e-20   70.6   6.7   1   1   2.8e-23     1e-19   70.4   6.7     1    48     2    49     2    49 0.99 Ribosomal protein L33
Ribosomal_L37e       PF01907.14    55 sp|Q06798|RL332_BACSU -             49     0.011   15.5   3.1   1   2   1.4e-05     0.052   13.3   0.4    11    34     2    25     1    28 0.86 Ribosomal protein L37e
HypA                 PF01155.14   113 sp|Q06798|RL332_BACSU -             49     0.042   13.5   1.5   1   1   1.5e-05     0.056   13.1   1.5    67   100     3    47     1    49 0.81 Hydrogenase expression/synthesis hypA family
zf-LITAF-like        PF10601.4     73 sp|Q06798|RL332_BACSU -             49     0.067   13.0   5.8   1   2   3.5e-05      0.13   12.1   0.3     4    27     3    26     1    30 0.87 LITAF-like zinc ribbon domain
Ribosomal_L34        PF00468.12    44 sp|P05647|RL34_BACSU -             44   5.6e-23   80.3  11.9   1   1   4.1e-27     6e-23   80.2  11.9     1    44     1    44     1    44 0.99 Ribosomal protein L34
Ribosomal_L35p       PF01632.14    61 sp|P55874|RL35_BACSU -             66   2.3e-25   88.2  10.7   1   1   1.7e-29   2.6e-25   88.0  10.7     1    61     2    62     2    62 0.99 Ribosomal protein L35
Ribosomal_L36        PF00444.13    38 sp|P20278|RL36_BACSU -             37   1.4e-20   73.0  10.7   1   1   9.8e-25   1.5e-20   72.9  10.7     1    38     1    37     1    37 0.99 Ribosomal protein L36
Ribosomal_L3         PF00297.17   263 sp|P42920|RL3_BACSU  -            209     1e-53  182.4   5.1   1   1     2e-56     3e-52  177.6   5.1     1   263     9   203     9   203 0.99 Ribosomal protein L3
Ribosomal_L4         PF00573.17   192 sp|P42921|RL4_BACSU  -            207     1e-73  246.8   1.4   1   1   1.5e-77   1.1e-73  246.7   1.4     1   191    17   204    17   205 0.99 Ribosomal protein L4/L1 family
DUF3353              PF11833.3    194 sp|P42921|RL4_BACSU  -            207     0.062   12.7   0.0   1   1   1.5e-05      0.11   11.9   0.0    34    78    34    83    30    93 0.73 Protein of unknown function (DUF3353)
Ribosomal_L5_C       PF00673.16    95 sp|P12877|RL5_BACSU  -            179   7.6e-43  144.1   0.0   1   1   1.6e-46   1.2e-42  143.5   0.0     1    94    84   177    84   178 0.99 ribosomal L5P family C-terminus
Ribosomal_L5         PF00281.14    56 sp|P12877|RL5_BACSU  -            179   8.9e-26   89.4   0.2   1   2   4.5e-29   3.3e-25   87.6   0.3     1    56    24    80    24    80 0.98 Ribosomal protein L5
Ribosomal_L6         PF00347.18    77 sp|P46898|RL6_BACSU  -            179   1.7e-46  156.6   5.4   1   2   2.4e-27   3.5e-23   81.8   0.1     1    77    11    83    11    83 0.98 Ribosomal protein L6
Ribosomal_L6         PF00347.18    77 sp|P46898|RL6_BACSU  -            179   1.7e-46  156.6   5.4   2   2   7.8e-26   1.2e-21   77.0   1.3     1    76    91   165    91   166 0.98 Ribosomal protein L6
Ribosomal_L12        PF00542.14    68 sp|P02394|RL7_BACSU  -            123   6.4e-31  106.1  12.7   2   2   7.8e-35   1.2e-30  105.3   8.1     1    68    56   123    56   123 0.99 Ribosomal protein L7/L12 C-terminal domain
Ribosomal_L9_C       PF03948.9     87 sp|P37437|RL9_BACSU  -            149   7.2e-31  106.1   0.8   1   1   2.4e-34   1.2e-30  105.4   0.8     1    87    62   148    62   148 0.98 Ribosomal protein L9, C-terminal domain
Ribosomal_L9_N       PF01281.14    48 sp|P37437|RL9_BACSU  -            149   1.5e-21   75.3   1.1   1   1   5.7e-25   2.8e-21   74.4   1.1     1    47     1    47     1    48 0.97 Ribosomal protein L9, N-terminal domain
TEX13                PF15186.1    152 sp|P37437|RL9_BACSU  -            149     0.011   15.2   0.3   1   1   3.6e-06     0.018   14.6   0.3    89   135    25    70     9    81 0.82 Testis-expressed sequence 13 protein family
tRNA_U5-meth_tr      PF05958.6    352 sp|O31503|RLMCD_BACSU -            459     1e-22   80.3   0.2   1   1   2.7e-24   1.8e-21   76.2   0.2   167   350   281   456   260   458 0.86 tRNA (Uracil-5-)-methyltransferase
Methyltransf_31      PF13847.1    152 sp|O31503|RLMCD_BACSU -            459   3.4e-14   52.6   0.0   1   1   1.5e-16     1e-13   51.1   0.0     3    80   311   388   309   443 0.76 Methyltransferase domain
TRAM                 PF01938.15    61 sp|O31503|RLMCD_BACSU -            459     6e-13   48.3   0.1   1   1   2.5e-15   1.7e-12   46.9   0.1     3    61     8    63     6    63 0.95 TRAM domain
Methyltransf_26      PF13659.1    117 sp|O31503|RLMCD_BACSU -            459   5.5e-09   36.0   0.0   1   1   1.7e-11   1.1e-08   35.0   0.0     3    80   314   391   312   433 0.83 Methyltransferase domain
Methyltransf_18      PF12847.2    112 sp|O31503|RLMCD_BACSU -            459   5.4e-08   33.4   0.0   1   1   1.7e-10   1.1e-07   32.3   0.0     3    78   313   389   311   434 0.79 Methyltransferase domain
Met_10               PF02475.11   200 sp|O31503|RLMCD_BACSU -            459   8.3e-08   32.0   0.7   1   1   4.2e-10   2.8e-07   30.3   0.7     9   152   217   360   210   413 0.65 Met-10+ like-protein
MTS                  PF05175.9    170 sp|O31503|RLMCD_BACSU -            459   3.1e-06   26.6   0.0   1   1   1.1e-08   7.6e-06   25.4   0.0    31    90   311   368   295   423 0.82 Methyltransferase small domain
PrmA                 PF06325.8    295 sp|O31503|RLMCD_BACSU -            459   3.4e-06   26.3   0.1   1   1   1.3e-08   8.6e-06   25.0   0.1   154   218   303   368   295   387 0.78 Ribosomal protein L11 methyltransferase (PrmA)
Methyltransf_15      PF09445.5    164 sp|O31503|RLMCD_BACSU -            459   5.6e-06   26.0   0.0   1   1   2.6e-08   1.8e-05   24.3   0.0     2    83   313   394   312   397 0.94 RNA cap guanine-N2 methyltransferase
Cons_hypoth95        PF03602.10   183 sp|O31503|RLMCD_BACSU -            459   3.8e-05   23.1   0.0   1   1   1.1e-07   7.1e-05   22.2   0.0    42   144   311   406   299   425 0.84 Conserved hypothetical protein 95
UPF0020              PF01170.13   180 sp|O31503|RLMCD_BACSU -            459   0.00011   21.8   0.0   1   1   3.2e-07   0.00022   20.8   0.0    22   115   305   390   302   391 0.85 Putative RNA methylase family UPF0020
Methyltransf_11      PF08241.7     95 sp|O31503|RLMCD_BACSU -            459   0.00014   22.2   0.0   1   1   8.1e-07   0.00055   20.3   0.0     5    53   320   370   316   378 0.91 Methyltransferase domain
RrnaAD               PF00398.15   262 sp|O31503|RLMCD_BACSU -            459   0.00031   19.8   0.0   1   1     8e-07   0.00054   19.0   0.0     4    71   285   352   282   362 0.85 Ribosomal RNA adenine dimethylase
Methyltransf_32      PF13679.1    141 sp|O31503|RLMCD_BACSU -            459    0.0043   16.7   0.0   1   1   1.9e-05     0.013   15.2   0.0    21    94   307   371   290   419 0.79 Methyltransferase domain
TPMT                 PF05724.6    218 sp|O31503|RLMCD_BACSU -            459    0.0053   16.2   0.0   1   1   1.4e-05    0.0095   15.3   0.0    31    84   305   358   289   372 0.78 Thiopurine S-methyltransferase (TPMT)
Methyltransf_25      PF13649.1    101 sp|O31503|RLMCD_BACSU -            459    0.0053   17.0   0.0   1   1   3.2e-05     0.022   15.1   0.0     2    61   316   371   315   390 0.85 Methyltransferase domain
N6_N4_Mtase          PF01555.13   231 sp|O31503|RLMCD_BACSU -            459      0.01   15.3   0.0   1   1   3.2e-05     0.022   14.2   0.0   192   230   312   350   299   351 0.92 DNA methylase
Methyltransf_12      PF08242.7     99 sp|O31503|RLMCD_BACSU -            459     0.013   15.9   0.0   1   1   5.5e-05     0.037   14.5   0.0     4    53   319   366   316   380 0.81 Methyltransferase domain
Methyltransf_23      PF13489.1    161 sp|O31503|RLMCD_BACSU -            459     0.014   15.0   0.0   1   1   0.00012     0.078   12.6   0.0    11    60   301   356   291   449 0.82 Methyltransferase domain
Ubie_methyltran      PF01209.13   233 sp|O31503|RLMCD_BACSU -            459     0.021   13.9   0.1   2   2   0.00025      0.17   10.9   0.0    46   109   309   370   294   384 0.86 ubiE/COQ5 methyltransferase family
Methyltransf_4       PF02390.12   197 sp|O31503|RLMCD_BACSU -            459     0.033   13.2   0.0   1   1   0.00011     0.071   12.1   0.0    10    87   304   377   287   386 0.82 Putative methyltransferase
PCMT                 PF01135.14   210 sp|O31503|RLMCD_BACSU -            459     0.045   13.2   0.0   1   1   0.00013      0.09   12.2   0.0    62   132   300   367   289   374 0.88 Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT)
SPOUT_MTase          PF02590.12   155 sp|Q45601|RLMH_BACSU -            159   7.4e-63  210.9   0.3   1   1   1.1e-66   8.2e-63  210.7   0.3     1   155     1   158     1   158 0.99 Predicted SPOUT methyltransferase
REGB_T4              PF10715.4    150 sp|Q45601|RLMH_BACSU -            159     0.071   13.2   0.0   1   1   2.4e-05      0.18   11.9   0.0    56    98   111   153   109   158 0.91 Endoribonuclease RegB T4-bacteriophage encoded
Radical_SAM          PF04055.16   166 sp|O34617|RLMN_BACSU -            363     4e-13   49.8   0.0   1   1   1.6e-16   8.1e-13   48.8   0.0     1   165   120   293   120   294 0.85 Radical SAM superfamily
Fer4_14              PF13394.1    119 sp|O34617|RLMN_BACSU -            363     2e-05   24.5   0.0   1   1   1.4e-08   6.8e-05   22.8   0.0     7   104   125   227   120   239 0.68 4Fe-4S single cluster domain
Fer4_12              PF13353.1    139 sp|O34617|RLMN_BACSU -            363   0.00085   19.4   0.3   2   2   9.6e-07    0.0047   17.0   0.0    12   131   123   240   111   243 0.75 4Fe-4S single cluster domain
PseudoU_synth_2      PF00849.17   164 sp|P35159|RLUB_BACSU -            244   4.5e-25   88.3   0.1   1   1     3e-28   1.1e-24   87.0   0.1     2   164    62   196    61   196 0.90 RNA pseudouridylate synthase
S4                   PF01479.20    48 sp|P35159|RLUB_BACSU -            244   6.3e-16   57.5   0.5   1   1   3.3e-19   1.2e-15   56.6   0.5     1    48     2    48     2    48 0.97 S4 domain
S4_2                 PF13275.1     65 sp|P35159|RLUB_BACSU -            244   9.4e-05   21.9   2.1   1   1   5.8e-08   0.00022   20.7   2.1    25    62    18    55     3    57 0.88 S4 domain
TMF_TATA_bd          PF12325.3    121 sp|P35159|RLUB_BACSU -            244     0.064   12.9   0.2   1   1   2.8e-05       0.1   12.2   0.2     9   103   135   226   128   238 0.88 TATA element modulatory factor 1 TATA binding
NTP_transferase      PF00483.18   248 sp|P39629|RMLA_BACSU -            246   3.9e-52  177.0   0.0   1   1   8.8e-56   4.4e-52  176.8   0.0     1   246     2   236     2   238 0.95 Nucleotidyl transferase
NTP_transf_3         PF12804.2    160 sp|P39629|RMLA_BACSU -            246   6.6e-12   45.7   0.0   1   1   1.5e-15   7.6e-12   45.6   0.0     1   120     3   131     3   194 0.84 MobA-like NTP transferase domain
IspD                 PF01128.14   221 sp|P39629|RMLA_BACSU -            246    0.0075   15.8   0.0   1   1   2.2e-06     0.011   15.2   0.0     4    65     4    67     1    84 0.88 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase
Epimerase            PF01370.16   236 sp|P39630|RMLB_BACSU -            315     1e-69  234.5   0.0   1   1   7.6e-73   1.3e-69  234.2   0.0     2   236     6   243     5   243 0.97 NAD dependent epimerase/dehydratase family
RmlD_sub_bind        PF04321.12   287 sp|P39630|RMLB_BACSU -            315   6.3e-24   84.3   0.0   1   1   5.1e-27   8.3e-24   83.9   0.0     3   240     5   272     3   298 0.88 RmlD substrate binding domain
3Beta_HSD            PF01073.14   280 sp|P39630|RMLB_BACSU -            315     4e-22   78.2   0.0   1   1     3e-25     5e-22   77.9   0.0     1   231     6   229     6   268 0.83 3-beta hydroxysteroid dehydrogenase/isomerase family
NAD_binding_4        PF07993.7    249 sp|P39630|RMLB_BACSU -            315   3.1e-18   65.6   0.2   1   1   6.3e-21     1e-17   63.8   0.2     1   200     7   183     7   210 0.82 Male sterility protein
Polysacc_synt_2      PF02719.10   294 sp|P39630|RMLB_BACSU -            315   5.5e-18   64.8   0.0   1   1   2.1e-20   3.4e-17   62.2   0.0     2   250     6   264     5   275 0.83 Polysaccharide biosynthesis protein
adh_short            PF00106.20   167 sp|P39630|RMLB_BACSU -            315   1.7e-09   37.8   0.0   1   1     2e-12   3.3e-09   36.8   0.0     1   134     3   124     3   127 0.86 short chain dehydrogenase
KR                   PF08659.5    181 sp|P39630|RMLB_BACSU -            315   5.7e-08   32.6   0.0   1   1   7.2e-11   1.2e-07   31.5   0.0     2   132     4   121     4   126 0.80 KR domain
NAD_binding_10       PF13460.1    183 sp|P39630|RMLB_BACSU -            315     1e-05   25.5   0.0   1   1   9.1e-09   1.5e-05   25.0   0.0     2   143     6   178     6   202 0.75 NADH(P)-binding
Saccharop_dh         PF03435.13   386 sp|P39630|RMLB_BACSU -            315    0.0062   15.5   0.0   1   1     6e-06    0.0099   14.8   0.0     5    76    10    83     6    94 0.83 Saccharopine dehydrogenase
RNase_HII            PF01351.13   198 sp|O31744|RNH2_BACSU -            255   3.3e-54  183.5   0.2   1   1   6.8e-58   5.1e-54  182.9   0.2     1   198    75   251    75   251 0.98 Ribonuclease HII
RNase_HII            PF01351.13   198 sp|P94541|RNH3_BACSU -            313   3.2e-58  196.6   0.0   1   1   5.4e-62     4e-58  196.3   0.0     1   198    97   301    97   301 0.97 Ribonuclease HII
DUF3378              PF11858.3     82 sp|P94541|RNH3_BACSU -            313   4.2e-29  100.4   0.7   1   1   1.2e-32   8.7e-29   99.4   0.7     1    78     2    80     2    83 0.90 Domain of unknown function (DUF3378)
RNase_H              PF00075.19   132 sp|P54162|RNHL_BACSU -            132   7.1e-21   74.9   0.0   1   1   1.1e-24   8.5e-21   74.6   0.0     5   131     4   126     2   127 0.83 RNase H
RVT_3                PF13456.1     88 sp|P54162|RNHL_BACSU -            132   1.4e-13   50.3   0.0   1   1   2.3e-17   1.7e-13   50.1   0.0     2    87    42   127    41   128 0.94 Reverse transcriptase-like
Lactamase_B          PF00753.22   194 sp|Q45493|RNJ1_BACSU -            555   6.1e-30  104.3   0.5   1   1   3.2e-33   9.6e-30  103.6   0.5     2   157    18   176    17   224 0.95 Metallo-beta-lactamase superfamily
Lactamase_B_2        PF12706.2    194 sp|Q45493|RNJ1_BACSU -            555   6.4e-10   38.8   0.0   1   2   7.9e-13   2.3e-09   37.0   0.0     4   158    35   199    32   255 0.69 Beta-lactamase superfamily domain
RMMBL                PF07521.7     43 sp|Q45493|RNJ1_BACSU -            555   2.5e-09   36.8   0.1   1   1   8.4e-13   2.5e-09   36.8   0.1    11    43   362   394   357   394 0.94 RNA-metabolising metallo-beta-lactamase
SIS_2                PF13580.1    138 sp|Q45493|RNJ1_BACSU -            555    0.0077   15.9   0.1   1   1   1.1e-05     0.032   13.9   0.1    16   125   230   344   216   356 0.70 SIS domain
PDEase_II            PF02112.10   335 sp|Q45493|RNJ1_BACSU -            555     0.056   12.3   0.1   1   1   3.4e-05       0.1   11.5   0.1    77    96    64    83    55    86 0.81 cAMP phosphodiesterases class-II
Lactamase_B          PF00753.22   194 sp|O31760|RNJ2_BACSU -            555   6.7e-19   68.2   0.1   1   1   2.5e-22   1.3e-18   67.4   0.1     2   152    18   171    17   184 0.96 Metallo-beta-lactamase superfamily
RMMBL                PF07521.7     43 sp|O31760|RNJ2_BACSU -            555   6.9e-11   41.7   0.0   2   2   2.8e-13   1.4e-09   37.6   0.0    11    43   362   394   359   394 0.95 RNA-metabolising metallo-beta-lactamase
Lactamase_B_2        PF12706.2    194 sp|O31760|RNJ2_BACSU -            555   6.1e-07   29.1   0.0   1   1   2.5e-10   1.2e-06   28.1   0.0    27   142    57   182    32   219 0.67 Beta-lactamase superfamily domain
DUF4093              PF13331.1     87 sp|P37547|RNM5_BACSU -            186   1.3e-30  105.4   0.0   1   1     7e-34   2.1e-30  104.7   0.0     2    86    93   176    92   177 0.96 Domain of unknown function (DUF4093)
Toprim               PF01751.17   100 sp|P37547|RNM5_BACSU -            186   6.7e-08   32.4   0.1   1   1   3.9e-11   1.1e-07   31.6   0.1     1    85     5    73     5    85 0.91 Toprim domain
Toprim_4             PF13662.1     81 sp|P37547|RNM5_BACSU -            186   1.1e-05   25.3   0.1   1   1   6.1e-09   1.8e-05   24.6   0.1     1    68     4    70     4    81 0.86 Toprim domain
T5orf172             PF10544.4    100 sp|P37547|RNM5_BACSU -            186     0.078   13.3   0.0   1   1   8.8e-05      0.26   11.6   0.0    15    34   146   167   136   184 0.74 T5orf172 domain
PEX-1N               PF09262.6     80 sp|P37547|RNM5_BACSU -            186     0.097   12.7   0.0   1   1   5.1e-05      0.15   12.1   0.0    13    45    23    55    20    89 0.83 Peroxisome biogenesis factor 1, N-terminal
Ribonuclease_P       PF00825.13   111 sp|P25814|RNPA_BACSU -            116   7.3e-34  116.0   4.3   1   1   1.7e-37   8.2e-34  115.8   4.3     1   109     1   106     1   108 0.97 Ribonuclease P
RNase_E_G            PF10150.4    271 sp|P25814|RNPA_BACSU -            116    0.0065   15.7   0.3   1   1   1.4e-06    0.0072   15.5   0.3    15    71    44   108    23   116 0.86 Ribonuclease E/G family
ORF6N                PF10543.4     88 sp|P25814|RNPA_BACSU -            116     0.083   12.9   1.0   2   2   8.4e-05      0.41   10.6   0.2    25    63    60    97    54   115 0.72 ORF6N domain
RNase_PH             PF01138.16   132 sp|P28619|RNPH_BACSU -            245   1.1e-26   93.7   0.0   1   2   5.1e-30   3.8e-26   91.9   0.0     1   129    10   140    10   141 0.93 3' exoribonuclease family, domain 1
RNase_PH_C           PF03725.10    68 sp|P28619|RNPH_BACSU -            245   2.2e-10   40.3   0.2   1   1   6.3e-14   4.7e-10   39.2   0.2     3    68   159   225   157   225 0.95 3' exoribonuclease family, domain 2
RNB                  PF00773.14   325 sp|O32231|RNR_BACSU  -            779  5.7e-111  370.9   0.2   1   1  4.6e-114  9.6e-111  370.1   0.2     1   324   248   577   248   578 0.95 RNB domain
OB_RNB               PF08206.6     58 sp|O32231|RNR_BACSU  -            779   9.7e-30  101.8   5.4   1   3   1.9e-23   4.1e-20   71.0   0.0     1    58    74   132    74   132 0.99 Ribonuclease B OB domain
OB_RNB               PF08206.6     58 sp|O32231|RNR_BACSU  -            779   9.7e-30  101.8   5.4   2   3   6.1e-11   1.3e-07   31.0   0.0     9    57   149   200   145   201 0.92 Ribonuclease B OB domain
S1                   PF00575.18    74 sp|O32231|RNR_BACSU  -            779   8.7e-18   64.1   0.5   1   1   2.6e-20   5.5e-17   61.6   0.8     2    73   625   707   624   707 0.97 S1 RNA binding domain
DUF4284              PF14112.1    122 sp|O32231|RNR_BACSU  -            779     0.079   13.4   0.0   1   1   9.3e-05       0.2   12.1   0.0    39   121   412   495   407   496 0.80 Domain of unknown function (DUF4284)
TFIIE_beta           PF02186.10    65 sp|O32231|RNR_BACSU  -            779     0.096   12.6   0.1   1   1   0.00017      0.36   10.8   0.1     7    42     7    43     3    54 0.82 TFIIE beta subunit core domain
DUF3552              PF12072.3    201 sp|O31774|RNY_BACSU  -            520   1.7e-76  255.9  32.7   1   1   1.6e-79   1.7e-76  255.9  32.7     1   201     5   205     5   205 0.99 Domain of unknown function (DUF3552)
HD                   PF01966.17   122 sp|O31774|RNY_BACSU  -            520   5.3e-19   68.4   3.8   1   1     5e-22   5.3e-19   68.4   3.8     2   121   337   428   336   429 0.95 HD domain
KH_1                 PF00013.24    60 sp|O31774|RNY_BACSU  -            520   1.2e-08   34.4   0.1   1   1   4.1e-11   4.3e-08   32.6   0.1     4    57   214   267   211   270 0.86 KH domain
HDOD                 PF08668.7    196 sp|O31774|RNY_BACSU  -            520   7.3e-07   28.6   1.4   2   2   4.4e-08   4.7e-05   22.7   0.2    93   151   334   391   320   407 0.84 HDOD domain
KH_4                 PF13083.1     73 sp|O31774|RNY_BACSU  -            520    0.0017   17.9   1.0   1   1   7.7e-06    0.0082   15.7   0.0    32    58   213   240   200   244 0.79 KH domain
KH_3                 PF13014.1     43 sp|O31774|RNY_BACSU  -            520    0.0053   16.3   0.5   1   1   1.4e-05     0.014   14.9   0.5     3    38   223   252   221   257 0.85 KH domain
KH_2                 PF07650.12    78 sp|O31774|RNY_BACSU  -            520     0.011   15.2   2.7   1   1   2.8e-05      0.03   13.8   0.0    35    58   221   244   212   256 0.87 KH domain
DUF1980              PF09323.5    182 sp|O31774|RNY_BACSU  -            520     0.023   14.4   0.1   1   1   6.8e-05     0.072   12.8   0.0    74   154     8    86     2   106 0.64 Domain of unknown function (DUF1980)
Lactamase_B_2        PF12706.2    194 sp|P54548|RNZ_BACSU  -            307     1e-33  116.5   0.1   1   1   3.7e-37   1.4e-33  116.1   0.1     3   194    34   270    32   270 0.80 Beta-lactamase superfamily domain
Lactamase_B          PF00753.22   194 sp|P54548|RNZ_BACSU  -            307   1.5e-13   50.8   0.2   1   2   9.2e-15   3.4e-11   43.1   0.1    10    94    26   106    15   178 0.77 Metallo-beta-lactamase superfamily
Lactamase_B_4        PF13691.1     63 sp|P54548|RNZ_BACSU  -            307    0.0002   20.7   0.0   1   1     1e-07   0.00039   19.8   0.0    15    56    25    65    14    72 0.83 tRNase Z endonuclease
PDEase_II            PF02112.10   335 sp|P54548|RNZ_BACSU  -            307     0.012   14.6   0.0   1   1   4.9e-06     0.018   13.9   0.0    67   103    43    81    30   104 0.77 cAMP phosphodiesterases class-II
Aldedh               PF00171.17   462 sp|P94391|ROCA2_BACSU -            515  3.8e-154  513.4   2.4   1   1  6.3e-158  4.7e-154  513.1   2.4     7   462    50   511    45   511 0.97 Aldehyde dehydrogenase family
DUF1489              PF07370.6    137 sp|P94391|ROCA2_BACSU -            515       0.1   12.1   0.0   1   1   2.6e-05       0.2   11.2   0.0    56   110    44    98    33   115 0.88 Protein of unknown function (DUF1489)
Aldedh               PF00171.17   462 sp|P39634|ROCA_BACSU -            515  4.3e-157  523.1   0.1   1   1  7.2e-161  5.3e-157  522.8   0.1     6   461    49   510    45   511 0.95 Aldehyde dehydrogenase family
Phage_int_SAM_5      PF13102.1    138 sp|P39634|ROCA_BACSU -            515      0.12   12.3   0.5   1   1   2.8e-05      0.21   11.5   0.5    36    94    87   151    72   169 0.78 Phage integrase SAM-like domain
AA_permease          PF00324.16   478 sp|P39636|ROCC_BACSU -            470  1.5e-121  406.1  47.8   1   1  2.2e-125  1.6e-121  405.9  47.8     1   475    16   459    16   462 0.97 Amino acid permease
AA_permease_2        PF13520.1    426 sp|P39636|ROCC_BACSU -            470   5.2e-35  120.8  50.8   1   1     9e-39   6.7e-35  120.4  50.8     5   409    16   431    13   448 0.82 Amino acid permease
AA_permease          PF00324.16   478 sp|P39137|ROCE_BACSU -            467    6e-124  413.9  38.2   1   1  1.4e-127  6.8e-124  413.8  38.2     1   474    19   460    19   464 0.96 Amino acid permease
AA_permease_2        PF13520.1    426 sp|P39137|ROCE_BACSU -            467   2.6e-45  154.7  42.3   1   1   7.1e-49   3.5e-45  154.3  42.3     5   425    19   450    16   451 0.84 Amino acid permease
AA_permease_C        PF13906.1     51 sp|P39137|ROCE_BACSU -            467   0.00077   19.2   4.7   2   2   1.5e-07   0.00077   19.2   4.7     1    47   404   452   404   456 0.83 C-terminus of AA_permease
FTSW_RODA_SPOVE      PF01098.14   359 sp|P39604|RODA_BACSU -            393  2.3e-115  385.2  34.8   1   1  3.6e-119  2.7e-115  385.0  34.8     3   357     9   383     7   385 0.95 Cell cycle protein
O-antigen_lig        PF13425.1    140 sp|P39604|RODA_BACSU -            393    0.0013   18.7  10.3   3   4   1.7e-07    0.0013   18.7  10.3     6   140   153   302   148   302 0.62 O-antigen ligase like membrane protein
Sigma54_DBD          PF04552.8    160 sp|P24219|RP54_BACSU -            436   1.1e-64  216.7   0.6   1   1   1.9e-67   1.8e-64  216.0   0.6     2   160   275   434   274   434 0.98 Sigma-54, DNA binding domain
Sigma54_CBD          PF04963.8    194 sp|P24219|RP54_BACSU -            436   2.8e-48  163.9   0.7   1   1     3e-51   2.8e-48  163.9   0.7    12   193    78   261    68   262 0.95 Sigma-54 factor, core binding domain
Sigma54_AID          PF00309.15    49 sp|P24219|RP54_BACSU -            436   5.2e-14   51.4   4.7   1   1     2e-16   1.8e-13   49.6   4.7     1    49     3    51     3    51 0.97 Sigma-54 factor, Activator interacting domain (AID)
HTH_17               PF12728.2     51 sp|P24219|RP54_BACSU -            436   0.00032   20.8   5.5   2   3   0.00012      0.11   12.7   0.0     2    27   323   348   322   364 0.88 Helix-turn-helix domain
HTH_23               PF13384.1     50 sp|P24219|RP54_BACSU -            436   0.00048   19.6   0.1   2   3   0.00023      0.21   11.2   0.0    18    39   323   344   316   346 0.90 Homeodomain-like domain
DUF1425              PF07233.7     94 sp|P24219|RP54_BACSU -            436      0.05   13.1   0.0   1   1   0.00017      0.16   11.5   0.0     7    78    69   140    64   148 0.91 Protein of unknown function (DUF1425)
HTH_IclR             PF09339.5     52 sp|P24219|RP54_BACSU -            436     0.056   13.0   0.1   1   1   0.00033       0.3   10.6   0.1    15    38   319   342   316   345 0.89 IclR helix-turn-helix domain
Sigma70_r4           PF04545.11    50 sp|P24219|RP54_BACSU -            436     0.065   12.5   0.3   1   1   0.00065       0.6    9.4   0.0    19    41   321   343   303   345 0.88 Sigma-70, region 4
HTH_38               PF13936.1     44 sp|P24219|RP54_BACSU -            436      0.14   11.6   2.2   1   1   0.00039      0.36   10.4   0.0    21    42   323   344   315   345 0.92 Helix-turn-helix domain
Ribul_P_3_epim       PF00834.14   201 sp|O34557|RPE_BACSU  -            217   1.2e-94  315.0   0.7   1   1   3.8e-98   1.4e-94  314.8   0.7     1   200     3   203     3   204 0.99 Ribulose-phosphate 3 epimerase family
PcrB                 PF01884.12   231 sp|O34557|RPE_BACSU  -            217    0.0014   17.9   0.3   2   2   7.4e-06     0.028   13.6   0.2   181   227   168   213   146   217 0.74 PcrB family
OMPdecase            PF00215.19   226 sp|O34557|RPE_BACSU  -            217     0.045   13.1   0.4   2   2   4.2e-05      0.16   11.3   0.1   185   225   173   212   153   213 0.88 Orotidine 5'-phosphate decarboxylase / HUMPS family
QRPTase_C            PF01729.14   169 sp|O34557|RPE_BACSU  -            217      0.09   12.2   0.2   3   3   0.00011       0.4   10.1   0.1   110   158   154   200    85   204 0.75 Quinolinate phosphoribosyl transferase, C-terminal domain
RNA_pol_A_CTD        PF03118.10    67 sp|P20429|RPOA_BACSU -            314     8e-30  102.0   5.4   1   1     6e-33   1.5e-29  101.2   5.4     2    67   240   305   239   305 0.97 Bacterial RNA polymerase, alpha chain C terminal domain
RNA_pol_A_bac        PF01000.21   112 sp|P20429|RPOA_BACSU -            314   2.3e-24   85.7   0.6   1   1   1.7e-27   4.2e-24   84.8   0.1     6   110    59   152    53   171 0.92 RNA polymerase Rpb3/RpoA insert domain
RNA_pol_L            PF01193.19    66 sp|P20429|RPOA_BACSU -            314   1.4e-19   68.9   0.0   1   1   1.1e-22   2.7e-19   68.0   0.0     2    66    26   222    25   222 0.94 RNA polymerase Rpb3/Rpb11 dimerisation domain
HHH_5                PF14520.1     60 sp|P20429|RPOA_BACSU -            314   0.00038   20.5   0.1   1   1   5.7e-07    0.0014   18.7   0.0    21    58   266   303   251   305 0.92 Helix-hairpin-helix domain
PASTA                PF03793.14    63 sp|P20429|RPOA_BACSU -            314    0.0043   16.6   0.3   2   2   0.00028      0.69    9.6   0.0     2    23   287   308   286   314 0.88 PASTA domain
DUF2325              PF10087.4     98 sp|P20429|RPOA_BACSU -            314      0.11   12.3   0.1   1   1   7.8e-05      0.19   11.5   0.1    29    95   233   302   219   305 0.84 Uncharacterized protein conserved in bacteria (DUF2325)
RNA_pol_Rpb2_6       PF00562.23   386 sp|P37870|RPOB_BACSU -           1193  1.1e-162  541.1   0.0   2   2  2.5e-165  6.3e-162  538.7   0.0     4   386   623  1069   620  1069 0.99 RNA polymerase Rpb2, domain 6
RNA_pol_Rpb2_1       PF04563.10   203 sp|P37870|RPOB_BACSU -           1193   2.4e-39  134.3   0.0   1   1   1.7e-42   4.2e-39  133.5   0.0     1   203    28   465    28   465 0.99 RNA polymerase beta subunit
RNA_pol_Rpb2_2       PF04561.9    190 sp|P37870|RPOB_BACSU -           1193   4.2e-37  127.4   0.1   1   2   6.2e-31   1.5e-27   96.2   0.0     1   156   140   290   140   295 0.97 RNA polymerase Rpb2, domain 2
RNA_pol_Rpb2_2       PF04561.9    190 sp|P37870|RPOB_BACSU -           1193   4.2e-37  127.4   0.1   2   2   2.8e-10   6.8e-07   28.8   0.0   149   190   371   410   358   410 0.87 RNA polymerase Rpb2, domain 2
RNA_pol_Rpb2_7       PF04560.15    82 sp|P37870|RPOB_BACSU -           1193   5.5e-31  106.6   0.0   1   1   6.6e-34   1.6e-30  105.1   0.0     1    79  1071  1144  1071  1147 0.98 RNA polymerase Rpb2, domain 7
RNA_pol_Rpb2_3       PF04565.11    68 sp|P37870|RPOB_BACSU -           1193   4.2e-29  100.1   0.0   1   1   3.8e-32   9.3e-29   98.9   0.0     1    68   469   538   469   538 0.99 RNA polymerase Rpb2, domain 3
RNA_pol_Rpb2_45      PF10385.4     66 sp|P37870|RPOB_BACSU -           1193   2.1e-25   88.2   1.6   1   1   3.6e-28   8.9e-25   86.2   1.6     1    66   547   614   547   614 0.99 RNA polymerase beta subunit external 1 domain
RNA_pol_Rpb1_1       PF04997.7    337 sp|P37871|RPOC_BACSU -           1199  1.9e-100  336.4   0.1   1   1  3.2e-103    6e-100  334.7   0.0     3   337     6   331     4   331 0.92 RNA polymerase Rpb1, domain 1
RNA_pol_Rpb1_5       PF04998.12   277 sp|P37871|RPOC_BACSU -           1199   5.6e-76  255.4   0.5   1   1     6e-79   1.1e-75  254.4   0.5     1   276   770  1135   770  1136 0.94 RNA polymerase Rpb1, domain 5
RNA_pol_Rpb1_2       PF00623.15   166 sp|P37871|RPOC_BACSU -           1199   3.5e-53  179.9   0.0   1   1     2e-55   3.8e-52  176.5   0.0     1   165   333   474   333   475 0.97 RNA polymerase Rpb1, domain 2
RNA_pol_Rpb1_3       PF04983.13   158 sp|P37871|RPOC_BACSU -           1199   4.7e-37  127.1   1.2   1   2   1.1e-39     2e-36  125.1   0.1     1   158   478   663   478   663 0.97 RNA polymerase Rpb1, domain 3
RNA_pol_Rpb1_4       PF05000.12   108 sp|P37871|RPOC_BACSU -           1199   8.9e-15   54.3   0.0   1   1   1.4e-17   2.6e-14   52.8   0.0     1    84   692   759   692   776 0.87 RNA polymerase Rpb1, domain 4
Peptidase_M23        PF01551.17    96 sp|P37871|RPOC_BACSU -           1199      0.04   13.9   0.3   1   1   0.00011       0.2   11.6   0.1    11    69   965  1024   958  1033 0.83 Peptidase family M23
AF0941-like          PF14591.1    127 sp|P37871|RPOC_BACSU -           1199      0.04   13.9   4.6   2   2   4.6e-05     0.084   12.9   0.8    10    66   625   700   616   718 0.78 AF0941-like
Apocytochr_F_C       PF01333.14   118 sp|P37871|RPOC_BACSU -           1199     0.054   13.3   0.6   1   1   8.6e-05      0.16   11.8   0.6     8    62   973  1026   968  1031 0.90 Apocytochrome F, C-terminal
HARE-HTH             PF05066.8     72 sp|P12464|RPOE_BACSU -            173   1.7e-12   47.4   0.0   1   1   1.8e-16   2.6e-12   46.9   0.0     1    72    14    81    14    81 0.97 HB1, ASXL, restriction endonuclease HTH domain
RNA_pol_Rpb6         PF01192.17    57 sp|O35011|RPOZ_BACSU -             67     8e-14   51.1   0.0   1   1   1.2e-17   8.9e-14   50.9   0.0     1    56     7    62     7    63 0.97 RNA polymerase Rpb6
DUF1599              PF07659.6     61 sp|O35011|RPOZ_BACSU -             67     0.026   14.6   0.1   1   1   4.6e-06     0.034   14.2   0.1    15    49    14    48     9    50 0.90 Domain of Unknown Function (DUF1599)
Sigma70_r4           PF04545.11    50 sp|P06574|RPSB_BACSU -            262   2.7e-19   68.2   1.9   2   2   5.5e-20   5.1e-17   60.9   0.5     1    50   202   251   202   251 0.98 Sigma-70, region 4
Sigma70_r3           PF04539.11    78 sp|P06574|RPSB_BACSU -            262   7.6e-19   67.3   0.9   1   1   2.4e-21   2.2e-18   65.9   0.9     1    76   113   187   113   189 0.91 Sigma-70 region 3
Sigma70_r2           PF04542.9     71 sp|P06574|RPSB_BACSU -            262     8e-13   47.8   0.0   2   2   2.3e-15   2.1e-12   46.4   0.0     1    70    34   103    34   104 0.95 Sigma-70 region 2
Sigma70_r4_2         PF08281.7     54 sp|P06574|RPSB_BACSU -            262   7.4e-08   31.7   1.6   2   2   2.5e-09   2.3e-06   26.9   0.2     3    54   198   249   196   249 0.95 Sigma-70, region 4
GerE                 PF00196.14    58 sp|P06574|RPSB_BACSU -            262   0.00013   21.2   1.2   3   3   3.4e-06    0.0031   16.7   0.3     2    46   204   249   203   251 0.91 Bacterial regulatory proteins, luxR family
HTH_23               PF13384.1     50 sp|P06574|RPSB_BACSU -            262   0.00035   20.1   0.1   2   2   1.4e-05     0.013   15.1   0.1     6    40   210   244   206   253 0.79 Homeodomain-like domain
DUF1492              PF07374.6    100 sp|P06574|RPSB_BACSU -            262    0.0011   19.0   0.6   1   1   1.2e-06    0.0011   19.0   0.6    37    99   188   249   158   250 0.91 Protein of unknown function (DUF1492)
HTH_37               PF13744.1     80 sp|P06574|RPSB_BACSU -            262    0.0011   18.7   1.4   1   1   4.9e-06    0.0046   16.7   0.7    21    59   211   249   191   254 0.89 Helix-turn-helix domain
DUF134               PF02001.11   106 sp|P06574|RPSB_BACSU -            262    0.0017   18.2   1.0   1   1   7.6e-06    0.0071   16.2   0.0    46    91   210   255   201   261 0.88 Protein of unknown function  DUF134
Phage_rep_O          PF04492.8    100 sp|P06574|RPSB_BACSU -            262     0.013   15.6   0.5   1   1   4.1e-05     0.038   14.2   0.1     9    79   185   254   181   259 0.70 Bacteriophage replication protein O
DUF1910              PF08928.5    117 sp|P06574|RPSB_BACSU -            262     0.049   13.6   0.6   1   2   0.00056      0.52   10.3   0.1    27    68    18    57     5    63 0.74 Domain of unknown function (DUF1910)
IF2_N                PF04760.10    54 sp|P06574|RPSB_BACSU -            262     0.059   13.0   1.8   1   1   0.00015      0.14   11.8   0.4     6    41   135   170   134   172 0.79 Translation initiation factor IF-2, N-terminal region
Sigma70_r4           PF04545.11    50 sp|P10726|RPSD_BACSU -            254   3.2e-19   67.9   0.6   1   2   0.00047      0.44    9.8   0.0    13    37   118   142   116   150 0.88 Sigma-70, region 4
Sigma70_r4           PF04545.11    50 sp|P10726|RPSD_BACSU -            254   3.2e-19   67.9   0.6   2   2   1.5e-18   1.4e-15   56.3   0.2     3    49   200   246   199   247 0.97 Sigma-70, region 4
Sigma70_r2           PF04542.9     71 sp|P10726|RPSD_BACSU -            254   1.7e-14   53.1   0.0   1   1   4.2e-17   3.9e-14   52.0   0.0     1    70    27    99    27   100 0.98 Sigma-70 region 2
Sigma70_r3           PF04539.11    78 sp|P10726|RPSD_BACSU -            254   1.6e-11   43.8   0.9   1   1   8.8e-14   8.1e-11   41.6   0.4     1    64   106   168   106   186 0.82 Sigma-70 region 3
Sigma70_r4_2         PF08281.7     54 sp|P10726|RPSD_BACSU -            254   5.2e-08   32.2   1.8   1   2   5.3e-05      0.05   13.0   0.0    19    43   118   142   111   148 0.88 Sigma-70, region 4
Sigma70_r4_2         PF08281.7     54 sp|P10726|RPSD_BACSU -            254   5.2e-08   32.2   1.8   2   2   1.3e-06    0.0012   18.2   0.4     3    51   194   242   192   245 0.90 Sigma-70, region 4
HTH_38               PF13936.1     44 sp|P10726|RPSD_BACSU -            254   4.6e-05   22.8   0.7   1   2   0.00085      0.79    9.3   0.1    11    33   116   138   105   140 0.79 Helix-turn-helix domain
HTH_38               PF13936.1     44 sp|P10726|RPSD_BACSU -            254   4.6e-05   22.8   0.7   2   2   0.00016      0.14   11.6   0.1     3    35   200   232   198   236 0.91 Helix-turn-helix domain
UPF0122              PF04297.9    101 sp|P10726|RPSD_BACSU -            254   0.00049   20.0   1.1   2   2    0.0001     0.094   12.7   0.2    18    58   202   242   188   253 0.84 Putative helix-turn-helix protein, YlxM / p13 like
HTH_23               PF13384.1     50 sp|P10726|RPSD_BACSU -            254    0.0012   18.4   0.0   2   2   0.00072      0.67    9.6   0.0     3    40   203   240   201   248 0.85 Homeodomain-like domain
HTH_24               PF13412.1     48 sp|P10726|RPSD_BACSU -            254    0.0015   17.8   0.1   2   2   0.00086       0.8    9.1   0.1    10    36   211   236   202   240 0.78 Winged helix-turn-helix DNA-binding
IF2_N                PF04760.10    54 sp|P10726|RPSD_BACSU -            254     0.015   14.9   0.2   1   1   7.1e-05     0.066   12.8   0.0     7    30   129   150   125   157 0.83 Translation initiation factor IF-2, N-terminal region
Terminase_5          PF06056.7     58 sp|P10726|RPSD_BACSU -            254     0.045   13.3   0.0   1   2   0.00093      0.86    9.2   0.0    10    28   122   140   115   148 0.85 Putative ATPase subunit of terminase (gpP-like)
Sigma70_r2           PF04542.9     71 sp|P06222|RPSE_BACSU -            239   1.9e-18   65.8   0.0   1   1     4e-21   3.7e-18   64.8   0.0     1    70    62   131    62   132 0.98 Sigma-70 region 2
Sigma70_r4           PF04545.11    50 sp|P06222|RPSE_BACSU -            239   9.6e-18   63.2   2.0   1   1   2.2e-20   2.1e-17   62.1   2.0     1    50   180   233   180   233 0.99 Sigma-70, region 4
HTH_3                PF01381.17    55 sp|P06222|RPSE_BACSU -            239   1.7e-06   27.7   0.4   1   1   7.2e-09   6.7e-06   25.8   0.1    10    32   204   226   199   236 0.89 Helix-turn-helix
Sigma70_r4_2         PF08281.7     54 sp|P06222|RPSE_BACSU -            239   0.00054   19.3   3.1   1   1   6.2e-07   0.00057   19.2   0.7     3    41   176   218   174   231 0.86 Sigma-70, region 4
HTH_AraC             PF00165.18    42 sp|P06222|RPSE_BACSU -            239   0.00099   18.8   0.0   1   1   3.2e-06     0.003   17.3   0.0    12    32   207   227   204   237 0.95 Bacterial regulatory helix-turn-helix proteins, AraC family
HTH_37               PF13744.1     80 sp|P06222|RPSE_BACSU -            239    0.0017   18.1   1.0   1   1   3.8e-06    0.0035   17.0   1.0    11    56   182   228   174   234 0.78 Helix-turn-helix domain
HTH_31               PF13560.1     64 sp|P06222|RPSE_BACSU -            239    0.0017   18.4   0.0   1   1   3.4e-06    0.0032   17.6   0.0    14    39   203   228   180   235 0.84 Helix-turn-helix domain
MarR_2               PF12802.2     62 sp|P06222|RPSE_BACSU -            239    0.0031   17.1   0.0   1   1   1.3e-05     0.012   15.2   0.0    17    47   202   229   180   231 0.82 MarR family
HTH_19               PF12844.2     64 sp|P06222|RPSE_BACSU -            239    0.0033   17.4   0.2   1   1   3.6e-06    0.0033   17.4   0.2    14    37   205   226   202   238 0.84 Helix-turn-helix domain
Trp_repressor        PF01371.14    88 sp|P06222|RPSE_BACSU -            239    0.0097   15.8   0.4   1   1   2.2e-05      0.02   14.7   0.4    16    79   174   234   162   239 0.71 Trp repressor protein
HTH_23               PF13384.1     50 sp|P06222|RPSE_BACSU -            239     0.018   14.7   0.0   1   1   5.1e-05     0.047   13.3   0.0    18    40   204   226   190   235 0.88 Homeodomain-like domain
HTH_25               PF13413.1     62 sp|P06222|RPSE_BACSU -            239     0.022   14.3   0.1   1   1   6.4e-05      0.06   12.9   0.1    11    40   204   233   201   236 0.89 Helix-turn-helix domain
Phage_CII            PF05269.6     91 sp|P06222|RPSE_BACSU -            239     0.025   14.5   0.2   1   1   7.1e-05     0.066   13.2   0.0    24    45   204   225   198   232 0.87 Bacteriophage CII protein
Mga                  PF05043.8     87 sp|P06222|RPSE_BACSU -            239     0.038   14.2   0.3   1   1    0.0001     0.092   13.0   0.3    18    60   190   234   173   236 0.73 Mga helix-turn-helix domain
HTH_Crp_2            PF13545.1     76 sp|P06222|RPSE_BACSU -            239      0.06   13.1   0.0   1   1   0.00023      0.21   11.3   0.0    30    50   205   225   181   234 0.86 Crp-like helix-turn-helix domain
GerE                 PF00196.14    58 sp|P06222|RPSE_BACSU -            239     0.086   12.1   2.4   2   2   0.00065       0.6    9.4   0.9     2    46   182   231   181   234 0.80 Bacterial regulatory proteins, luxR family
Sigma70_r2           PF04542.9     71 sp|P07860|RPSF_BACSU -            255   2.9e-18   65.2   0.2   1   1   9.8e-21   7.6e-18   63.8   0.0     1    68    37   104    37   106 0.97 Sigma-70 region 2
Sigma70_r4           PF04545.11    50 sp|P07860|RPSF_BACSU -            255   1.4e-17   62.7   2.7   2   2   1.2e-18   9.7e-16   56.8   1.7     1    49   199   247   199   248 0.97 Sigma-70, region 4
Sigma70_r3           PF04539.11    78 sp|P07860|RPSF_BACSU -            255     2e-17   62.8   3.6   1   2   5.5e-17   4.3e-14   52.1   1.4     1    75   115   187   115   189 0.90 Sigma-70 region 3
Sigma70_r3           PF04539.11    78 sp|P07860|RPSF_BACSU -            255     2e-17   62.8   3.6   2   2   0.00062      0.49   10.3   0.0    22    54   220   252   217   255 0.84 Sigma-70 region 3
Sigma70_r4_2         PF08281.7     54 sp|P07860|RPSF_BACSU -            255   1.4e-07   30.8   1.4   1   1   1.8e-10   1.4e-07   30.8   1.4     3    46   195   238   193   246 0.89 Sigma-70, region 4
HTH_23               PF13384.1     50 sp|P07860|RPSF_BACSU -            255    0.0001   21.7   1.5   1   1   3.8e-07    0.0003   20.3   0.2     2    40   203   241   202   245 0.92 Homeodomain-like domain
HTH_3                PF01381.17    55 sp|P07860|RPSF_BACSU -            255   0.00011   21.9   0.4   1   1   6.4e-07    0.0005   19.8   0.3    11    32   220   241   218   249 0.92 Helix-turn-helix
HTH_37               PF13744.1     80 sp|P07860|RPSF_BACSU -            255    0.0002   21.0   0.2   1   1   2.6e-07    0.0002   21.0   0.2    29    58   216   245   195   249 0.85 Helix-turn-helix domain
Sigma70_ECF          PF07638.6    185 sp|P07860|RPSF_BACSU -            255   0.00041   20.0   1.7   1   2   0.00081      0.63    9.6   0.1     2    38    17    53    16    65 0.76 ECF sigma factor
Sigma70_ECF          PF07638.6    185 sp|P07860|RPSF_BACSU -            255   0.00041   20.0   1.7   2   2   0.00093      0.72    9.4   0.1   124   170   194   237   173   252 0.73 ECF sigma factor
MarR_2               PF12802.2     62 sp|P07860|RPSF_BACSU -            255   0.00065   19.3   0.1   2   2   3.9e-05     0.031   13.9   0.0    13    44   212   241   196   245 0.80 MarR family
HTH_19               PF12844.2     64 sp|P07860|RPSF_BACSU -            255    0.0041   17.1   0.2   1   1   2.2e-05     0.017   15.1   0.1    14    35   220   241   213   250 0.87 Helix-turn-helix domain
HTH_31               PF13560.1     64 sp|P07860|RPSF_BACSU -            255    0.0052   16.9   0.0   1   1   2.2e-05     0.017   15.3   0.0    16    36   220   240   208   244 0.90 Helix-turn-helix domain
HTH_26               PF13443.1     63 sp|P07860|RPSF_BACSU -            255     0.008   16.3   0.1   1   1   7.5e-05     0.058   13.5   0.1    11    40   219   248   216   250 0.89 Cro/C1-type HTH DNA-binding domain
HTH_28               PF13518.1     52 sp|P07860|RPSF_BACSU -            255      0.01   15.7   1.5   1   1   3.7e-05     0.029   14.3   0.4     1    36   207   242   207   247 0.89 Helix-turn-helix domain
DUF134               PF02001.11   106 sp|P07860|RPSF_BACSU -            255      0.02   14.7   0.1   1   1   5.3e-05     0.041   13.7   0.1    44    79   203   240   191   250 0.78 Protein of unknown function  DUF134
HTH_24               PF13412.1     48 sp|P07860|RPSF_BACSU -            255     0.033   13.5   0.7   1   1   0.00036      0.28   10.5   0.1    18    36   219   237   206   241 0.83 Winged helix-turn-helix DNA-binding
GerE                 PF00196.14    58 sp|P07860|RPSF_BACSU -            255     0.038   13.3   0.3   2   2   0.00096      0.75    9.1   0.2     4    48   203   248   200   251 0.82 Bacterial regulatory proteins, luxR family
Trp_repressor        PF01371.14    88 sp|P07860|RPSF_BACSU -            255     0.038   13.9   0.4   1   1   0.00013       0.1   12.5   0.2    16    73   184   242   176   252 0.78 Trp repressor protein
HTH_38               PF13936.1     44 sp|P07860|RPSF_BACSU -            255     0.048   13.2   1.2   2   2    0.0011      0.88    9.1   0.1     7    34   203   232   201   237 0.81 Helix-turn-helix domain
Sigma70_r2           PF04542.9     71 sp|P19940|RPSG_BACSU -            260   1.4e-17   63.0   0.0   1   1   3.1e-20   2.7e-17   62.1   0.0     1    69    43   111    43   113 0.97 Sigma-70 region 2
Sigma70_r4           PF04545.11    50 sp|P19940|RPSG_BACSU -            260   1.8e-14   52.7   2.1   2   2   1.7e-16   1.5e-13   49.8   0.6     2    48   208   254   207   256 0.96 Sigma-70, region 4
Sigma70_r3           PF04539.11    78 sp|P19940|RPSG_BACSU -            260     7e-10   38.6   1.0   1   2   8.2e-10   7.1e-07   29.0   0.0     6    58   126   178   122   196 0.88 Sigma-70 region 3
HTH_3                PF01381.17    55 sp|P19940|RPSG_BACSU -            260   6.9e-06   25.8   0.1   2   2   4.1e-07   0.00036   20.3   0.1     8    32   225   249   219   254 0.92 Helix-turn-helix
Sigma70_r4_2         PF08281.7     54 sp|P19940|RPSG_BACSU -            260   2.5e-05   23.6   0.6   1   1   9.1e-08     8e-05   22.0   0.4     3    45   203   245   201   254 0.88 Sigma-70, region 4
HTH_31               PF13560.1     64 sp|P19940|RPSG_BACSU -            260   0.00071   19.7   0.2   1   1     3e-06    0.0026   17.9   0.0    13    39   220   251   203   254 0.80 Helix-turn-helix domain
Sigma70_ECF          PF07638.6    185 sp|P19940|RPSG_BACSU -            260    0.0011   18.7   0.5   2   2   8.1e-06    0.0071   16.0   0.1   119   171   197   246   176   259 0.72 ECF sigma factor
HTH_37               PF13744.1     80 sp|P19940|RPSG_BACSU -            260    0.0013   18.4   0.4   1   1   7.6e-06    0.0066   16.2   0.2    31    58   226   253   217   255 0.90 Helix-turn-helix domain
HTH_19               PF12844.2     64 sp|P19940|RPSG_BACSU -            260    0.0016   18.4   0.3   2   2   3.1e-05     0.027   14.4   0.1    12    34   226   248   218   257 0.87 Helix-turn-helix domain
HTH_28               PF13518.1     52 sp|P19940|RPSG_BACSU -            260    0.0016   18.3   0.0   1   1   1.5e-05     0.013   15.4   0.0    10    34   224   248   213   250 0.80 Helix-turn-helix domain
HTH_23               PF13384.1     50 sp|P19940|RPSG_BACSU -            260    0.0018   17.8   0.1   1   1     1e-05    0.0089   15.6   0.0    10    39   217   248   208   253 0.79 Homeodomain-like domain
Trp_repressor        PF01371.14    88 sp|P19940|RPSG_BACSU -            260    0.0045   16.8   0.4   1   1   1.3e-05     0.011   15.6   0.4    34    80   216   258   187   260 0.74 Trp repressor protein
GerE                 PF00196.14    58 sp|P19940|RPSG_BACSU -            260    0.0082   15.4   0.5   1   1   2.9e-05     0.025   13.8   0.4     3    46   210   254   208   257 0.83 Bacterial regulatory proteins, luxR family
HTH_26               PF13443.1     63 sp|P19940|RPSG_BACSU -            260     0.032   14.4   0.1   1   1   0.00024      0.21   11.8   0.2     6    32   219   248   214   257 0.76 Cro/C1-type HTH DNA-binding domain
HTH_25               PF13413.1     62 sp|P19940|RPSG_BACSU -            260     0.034   13.7   0.1   1   1   9.9e-05     0.086   12.4   0.1     5    40   221   256   217   259 0.88 Helix-turn-helix domain
MarR_2               PF12802.2     62 sp|P19940|RPSG_BACSU -            260     0.053   13.1   0.1   2   2   0.00081      0.71    9.5   0.0    23    41   228   246   209   253 0.84 MarR family
HTH_38               PF13936.1     44 sp|P19940|RPSG_BACSU -            260      0.18   11.3   1.1   1   1   0.00098      0.85    9.2   0.2     4    38   210   244   207   246 0.76 Helix-turn-helix domain
Sigma70_r2           PF04542.9     71 sp|P17869|RPSH_BACSU -            218   7.3e-14   51.1   0.1   1   1   1.1e-16   1.3e-13   50.2   0.1     1    70    38   107    38   108 0.96 Sigma-70 region 2
Sigma70_r4_2         PF08281.7     54 sp|P17869|RPSH_BACSU -            218   5.8e-10   38.4   0.2   1   1   8.1e-13     1e-09   37.7   0.2    10    54   164   207   159   207 0.96 Sigma-70, region 4
GerE                 PF00196.14    58 sp|P17869|RPSH_BACSU -            218   5.2e-06   25.6   0.0   1   1   6.9e-09   8.5e-06   24.9   0.0     3    47   164   208   162   209 0.96 Bacterial regulatory proteins, luxR family
HTH_23               PF13384.1     50 sp|P17869|RPSH_BACSU -            218   0.00016   21.1   0.1   1   1   2.9e-07   0.00036   20.0   0.1     9    40   171   202   166   209 0.89 Homeodomain-like domain
HTH_38               PF13936.1     44 sp|P17869|RPSH_BACSU -            218     0.004   16.6   0.0   1   1     8e-06    0.0099   15.4   0.0    14    43   173   202   163   202 0.84 Helix-turn-helix domain
Sigma70_ECF          PF07638.6    185 sp|P17869|RPSH_BACSU -            218     0.008   15.8   0.7   1   1   2.5e-05     0.031   13.9   0.7     6   182    22   210    19   213 0.74 ECF sigma factor
HTH_Tnp_Tc3_1        PF11427.3     50 sp|P17869|RPSH_BACSU -            218     0.017   14.7   0.1   1   1   2.7e-05     0.033   13.8   0.1     2    38   162   197   161   202 0.87 Tc3 transposase
HTH_28               PF13518.1     52 sp|P17869|RPSH_BACSU -            218     0.018   15.0   0.1   2   2   0.00011      0.14   12.2   0.1     4    37   171   204   170   212 0.90 Helix-turn-helix domain
Sigma70_r4           PF04545.11    50 sp|P17869|RPSH_BACSU -            218     0.022   14.0   0.2   1   1   4.3e-05     0.053   12.8   0.2     5    33   165   192   163   209 0.76 Sigma-70, region 4
Terminase_5          PF06056.7     58 sp|P17869|RPSH_BACSU -            218     0.023   14.2   0.0   1   1   4.3e-05     0.053   13.0   0.0     4    32   170   198   167   209 0.85 Putative ATPase subunit of terminase (gpP-like)
UPF0122              PF04297.9    101 sp|P17869|RPSH_BACSU -            218     0.027   14.5   1.1   1   1   4.5e-05     0.055   13.4   0.4    15    64   162   210   154   216 0.90 Putative helix-turn-helix protein, YlxM / p13 like
HTH_Tnp_ISL3         PF13542.1     52 sp|P17869|RPSH_BACSU -            218      0.12   11.6   0.0   1   1   0.00021      0.26   10.5   0.0    16    51   168   203   167   204 0.93 Helix-turn-helix domain of transposase family ISL3
Sigma70_r4           PF04545.11    50 sp|P12254|RPSK_BACSU -            294   3.8e-16   58.1   0.3   1   1   1.1e-18     7e-16   57.2   0.3     2    48   226   276   225   278 0.95 Sigma-70, region 4
Sigma70_r2           PF04542.9     71 sp|P12254|RPSK_BACSU -            294   8.7e-15   54.0   0.0   1   2   1.2e-16   7.7e-14   51.0   0.0     1    61    55   115    55   116 0.98 Sigma-70 region 2
HTH_23               PF13384.1     50 sp|P12254|RPSK_BACSU -            294   1.1e-06   28.0   0.0   1   1   1.9e-08   1.2e-05   24.8   0.0    14    40   245   271   236   275 0.88 Homeodomain-like domain
HTH_3                PF01381.17    55 sp|P12254|RPSK_BACSU -            294   2.1e-06   27.4   0.2   1   1     8e-09   4.9e-06   26.2   0.2     7    31   246   270   244   272 0.92 Helix-turn-helix
HTH_19               PF12844.2     64 sp|P12254|RPSK_BACSU -            294   2.9e-05   24.0   0.6   1   1   1.5e-07   9.3e-05   22.4   0.2    13    34   249   270   245   285 0.79 Helix-turn-helix domain
MarR_2               PF12802.2     62 sp|P12254|RPSK_BACSU -            294   0.00011   21.7   0.0   1   1   4.2e-07   0.00026   20.6   0.0    23    44   250   271   226   275 0.83 MarR family
HTH_28               PF13518.1     52 sp|P12254|RPSK_BACSU -            294   0.00023   21.0   0.0   2   2   4.9e-06     0.003   17.5   0.1     9    35   245   271   243   273 0.86 Helix-turn-helix domain
HTH_24               PF13412.1     48 sp|P12254|RPSK_BACSU -            294    0.0004   19.6   0.1   1   1   2.4e-06    0.0015   17.9   0.0    18    36   249   267   243   268 0.89 Winged helix-turn-helix DNA-binding
HTH_38               PF13936.1     44 sp|P12254|RPSK_BACSU -            294   0.00053   19.4   0.1   1   1   1.6e-06     0.001   18.5   0.1    17    40   245   268   229   272 0.84 Helix-turn-helix domain
HTH_31               PF13560.1     64 sp|P12254|RPSK_BACSU -            294   0.00077   19.6   0.0   1   1   2.2e-06    0.0014   18.8   0.0    15    37   249   271   231   275 0.91 Helix-turn-helix domain
Trp_repressor        PF01371.14    88 sp|P12254|RPSK_BACSU -            294    0.0031   17.4   0.1   1   1   1.1e-05    0.0067   16.3   0.1    30    71   232   270   205   283 0.72 Trp repressor protein
GerE                 PF00196.14    58 sp|P12254|RPSK_BACSU -            294    0.0074   15.5   0.6   2   2   0.00029      0.18   11.1   0.4    18    46   248   276   226   277 0.81 Bacterial regulatory proteins, luxR family
HTH_37               PF13744.1     80 sp|P12254|RPSK_BACSU -            294      0.01   15.6   0.1   1   1   3.7e-05     0.023   14.4   0.1    30    55   247   272   245   277 0.87 Helix-turn-helix domain
HTH_10               PF04967.7     53 sp|P12254|RPSK_BACSU -            294     0.026   14.0   0.1   1   1   9.6e-05     0.059   12.9   0.1    19    50   244   275   243   278 0.83 HTH DNA binding domain
HTH_AraC             PF00165.18    42 sp|P12254|RPSK_BACSU -            294     0.037   13.8   0.1   1   1   0.00015      0.09   12.6   0.1    12    32   252   272   244   282 0.90 Bacterial regulatory helix-turn-helix proteins, AraC family
TrmB                 PF01978.14    68 sp|P12254|RPSK_BACSU -            294     0.041   13.5   0.3   2   2   0.00083      0.51   10.0   0.1    20    42   246   268   243   276 0.88 Sugar-specific transcriptional regulator TrmB
HTH_5                PF01022.15    47 sp|P12254|RPSK_BACSU -            294     0.052   13.2   0.4   2   2   0.00084      0.52   10.0   0.0    13    34   246   267   245   267 0.91 Bacterial regulatory protein, arsR family
Sigma70_r4_2         PF08281.7     54 sp|P12254|RPSK_BACSU -            294     0.057   12.8   0.6   1   1   0.00025      0.15   11.5   0.6    26    54   248   276   219   276 0.76 Sigma-70, region 4
HTH_29               PF13551.1    112 sp|P12254|RPSK_BACSU -            294      0.06   13.4   0.1   1   1   0.00032       0.2   11.8   0.1     7    39   244   275   240   292 0.76 Winged helix-turn helix
KorB                 PF08535.5     93 sp|P12254|RPSK_BACSU -            294     0.068   13.3   0.0   1   1   0.00043      0.27   11.4   0.0     2    23   247   268   246   285 0.87 KorB domain
HTH_25               PF13413.1     62 sp|P12254|RPSK_BACSU -            294     0.069   12.7   0.8   1   1   0.00035      0.22   11.2   0.0     8    36   246   274   245   283 0.84 Helix-turn-helix domain
HTH_Crp_2            PF13545.1     76 sp|P12254|RPSK_BACSU -            294     0.085   12.6   0.0   1   1   0.00033      0.21   11.4   0.0    30    48   250   268   224   271 0.88 Crp-like helix-turn-helix domain
RRF                  PF01765.14   165 sp|P81101|RRF_BACSU  -            185   9.7e-71  236.5   5.0   1   1   5.4e-74   1.3e-70  236.0   5.0     2   165    20   183    19   183 0.99 Ribosome recycling factor
DUF883               PF05957.8     94 sp|P81101|RRF_BACSU  -            185    0.0012   19.2   3.1   2   2   4.7e-07    0.0012   19.2   3.1     8    70   107   169   101   171 0.93 Bacterial protein of unknown function (DUF883)
RRF_GI               PF12614.3    128 sp|P81101|RRF_BACSU  -            185     0.033   14.0   1.7   2   2   1.7e-05     0.042   13.6   0.5     4    67    97   160    94   184 0.79 Ribosome recycling factor
Sec20                PF03908.8     92 sp|P81101|RRF_BACSU  -            185      0.12   12.1   1.1   1   1    0.0001      0.25   11.0   0.2    22    54   144   176   123   183 0.82 Sec20
Metal_resist         PF13801.1    125 sp|P81101|RRF_BACSU  -            185      0.16   11.9   1.8   2   2   7.9e-05       0.2   11.6   0.1    33   101    96   165    84   174 0.79 Heavy-metal resistance
IMD                  PF08397.6    219 sp|P81101|RRF_BACSU  -            185       1.2    8.4   7.3   1   1   9.7e-05      0.24   10.6   4.1    93   163   106   177    98   184 0.77 IRSp53/MIM homology domain
Ribosomal_S10        PF00338.17    97 sp|P21471|RS10_BACSU -            102   2.8e-40  136.0   0.1   1   1   6.2e-44   3.1e-40  135.9   0.1     1    97     6   102     6   102 0.99 Ribosomal protein S10p/S20e
DUF384               PF04064.8     58 sp|P21471|RS10_BACSU -            102    0.0012   18.4   0.2   1   1   4.5e-07    0.0022   17.5   0.2    17    46    45    76    44    97 0.67 Domain of unknown function (DUF384)
Phi-29_GP3           PF05435.6    266 sp|P21471|RS10_BACSU -            102      0.12   11.5   0.0   1   1   2.7e-05      0.13   11.4   0.0     6    74     7    72     1    79 0.80 Phi-29 DNA terminal protein GP3
Ribosomal_S11        PF00411.14   110 sp|P04969|RS11_BACSU -            131   6.5e-50  167.9   0.4   1   1   5.4e-54   8.1e-50  167.6   0.4     1   110    21   130    21   130 0.99 Ribosomal protein S11
Ribosom_S12_S23      PF00164.20   122 sp|P21472|RS12_BACSU -            138   1.2e-50  170.0   2.5   1   1   2.3e-53   1.7e-49  166.2   2.5     1   122     2   136     2   136 0.87 Ribosomal protein S12/S23
FeoC                 PF09012.5     69 sp|P21472|RS12_BACSU -            138     0.077   12.7   0.0   1   2   2.5e-05      0.18   11.5   0.0    36    52     5    21     2    43 0.86 FeoC like transcriptional regulator
Ribosomal_S13        PF00416.17   107 sp|P20282|RS13_BACSU -            121   5.1e-40  136.2   1.8   1   1   7.9e-44   5.9e-40  136.0   1.8     1   107     3   108     3   108 0.99 Ribosomal protein S13/S18
FbpA                 PF05833.6    455 sp|P20282|RS13_BACSU -            121   0.00061   18.4   0.0   1   1   9.3e-08   0.00069   18.2   0.0   189   238    15    63     5    82 0.86 Fibronectin-binding protein A N-terminus (FbpA)
Ribosomal_S14        PF00253.16    55 sp|O31587|RS14B_BACSU -             89   3.4e-28   96.7   0.2   1   1     7e-32   5.2e-28   96.2   0.2     2    55    35    88    34    88 0.98 Ribosomal protein S14p/S29e
DUF3073              PF11273.3     65 sp|O31587|RS14B_BACSU -             89    0.0091   16.5   0.7   1   1   2.5e-06     0.018   15.5   0.7     7    36     2    31     1    47 0.84 Protein of unknown function (DUF3073)
Ribosomal_S14        PF00253.16    55 sp|P12878|RS14_BACSU -             61   1.4e-25   88.3   3.4   1   1   3.3e-29   1.6e-25   88.1   3.4     4    55     9    60     6    60 0.94 Ribosomal protein S14p/S29e
FYVE                 PF01363.16    69 sp|P12878|RS14_BACSU -             61     0.032   14.1   2.2   1   1   7.9e-06     0.039   13.8   2.2     7    33    19    45    13    52 0.87 FYVE zinc finger
DnaJ_CXXCXGXG        PF00684.14    66 sp|P12878|RS14_BACSU -             61     0.038   14.0   1.4   1   1   9.8e-06     0.049   13.6   1.4    27    62     7    43     4    46 0.88 DnaJ central domain
Ribosomal_S15        PF00312.17    83 sp|P21473|RS15_BACSU -             89   1.3e-31  108.2   3.9   1   1   2.9e-35   1.4e-31  108.0   3.9     2    83     7    88     6    88 0.98 Ribosomal protein S15
DUF99                PF01949.11   187 sp|P21473|RS15_BACSU -             89      0.12   11.4   0.0   1   1   2.6e-05      0.13   11.3   0.0    89   136    21    68    10    87 0.79 Protein of unknown function DUF99
DUF3782              PF12644.2     64 sp|P21473|RS15_BACSU -             89      0.26   11.0   1.8   1   1   8.8e-05      0.44   10.3   1.8     7    42    33    88     1    89 0.79 Protein of unknown function (DUF3782)
Ribosomal_S16        PF00886.14    62 sp|P21474|RS16_BACSU -             90   1.1e-26   92.3   0.0   1   1   9.1e-31   1.3e-26   92.0   0.0     1    62     9    67     9    67 0.96 Ribosomal protein S16
Ribosomal_S17        PF00366.15    69 sp|P12874|RS17_BACSU -             87     4e-30  103.6   3.8   1   1   6.5e-34   4.8e-30  103.3   3.8     1    69    12    80    12    80 0.99 Ribosomal protein S17
LOH1CR12             PF10158.4    131 sp|P12874|RS17_BACSU -             87     0.084   12.6   0.2   1   1   1.3e-05     0.097   12.4   0.2    56   112    10    66     2    78 0.90 Tumour suppressor protein
Ribosomal_S18        PF01084.15    54 sp|P21475|RS18_BACSU -             79   3.1e-29  100.5   0.5   1   1   2.6e-33   3.8e-29  100.3   0.5     2    54    21    73    20    73 0.97 Ribosomal protein S18
Ribosomal_S19        PF00203.16    81 sp|P21476|RS19_BACSU -             92   8.7e-39  131.0   0.3   1   1   1.3e-42   9.9e-39  130.8   0.3     1    81     3    83     3    83 0.99 Ribosomal protein S19
Xol-1_GHMP-like      PF09109.5    191 sp|P21476|RS19_BACSU -             92     0.091   12.8   0.0   1   1   1.9e-05      0.14   12.2   0.0   123   151     4    32     1    37 0.92 Switch protein XOL-1, GHMP-like
S1                   PF00575.18    74 sp|P38494|RS1H_BACSU -            382   6.8e-82  269.5  34.4   1   4   5.3e-19   1.1e-15   57.4   6.6     2    73    13    83    12    84 0.95 S1 RNA binding domain
S1                   PF00575.18    74 sp|P38494|RS1H_BACSU -            382   6.8e-82  269.5  34.4   2   4   6.6e-18   1.4e-14   53.9   1.6     2    74    99   167    98   167 0.97 S1 RNA binding domain
S1                   PF00575.18    74 sp|P38494|RS1H_BACSU -            382   6.8e-82  269.5  34.4   3   4   6.3e-30   1.3e-26   92.4   2.6     2    74   185   256   184   256 0.98 S1 RNA binding domain
S1                   PF00575.18    74 sp|P38494|RS1H_BACSU -            382   6.8e-82  269.5  34.4   4   4   3.6e-27   7.6e-24   83.6   1.2     2    74   270   342   269   342 0.98 S1 RNA binding domain
EXOSC1               PF10447.4     82 sp|P38494|RS1H_BACSU -            382   3.4e-05   23.7   3.4   1   3   1.8e-06    0.0038   17.1   0.7     1    33    12    53    12   168 0.79 Exosome component EXOSC1/CSL4
Xylo_C               PF12529.3    178 sp|P38494|RS1H_BACSU -            382     0.005   16.2   0.0   1   1   3.8e-06    0.0081   15.5   0.0   101   173   162   248   128   251 0.84 Xylosyltransferase C terminal
Glyco_transf_20      PF00982.16   474 sp|P38494|RS1H_BACSU -            382      0.03   12.8   0.1   1   1   2.7e-05     0.057   11.8   0.1   231   345   230   333   213   340 0.79 Glycosyltransferase family 20
DUF3086              PF11285.3    284 sp|P38494|RS1H_BACSU -            382     0.047   12.4   0.1   1   1   4.8e-05       0.1   11.4   0.1     8   128   229   349   224   365 0.88 Protein of unknown function (DUF3086)
Ribosomal_S20p       PF01649.13    84 sp|P21477|RS20_BACSU -             88   9.5e-31  106.0  16.4   1   1   3.5e-34     1e-30  105.8  16.4     1    83     2    84     2    85 0.99 Ribosomal protein S20
INTS5_N              PF14837.1    213 sp|P21477|RS20_BACSU -             88     0.078   12.3   1.1   1   1   3.3e-05     0.099   12.0   1.1    52   101    23    73    18    77 0.92 Integrator complex subunit 5 N-terminus
DUF2250              PF10007.4     93 sp|P21477|RS20_BACSU -             88      0.29   11.0   4.4   2   2   5.3e-05      0.16   11.9   1.9    15    66    30    81    16    84 0.84 Uncharacterized protein conserved in archaea (DUF2250)
DUF1542              PF07564.6     70 sp|P21477|RS20_BACSU -             88      0.41   10.6  12.9   1   1   0.00019      0.57   10.2  12.9     4    68     6    72     3    74 0.87 Domain of Unknown Function (DUF1542)
Ribosomal_S21        PF01165.15    57 sp|P21478|RS21_BACSU -             57   5.7e-23   80.1  10.5   1   1   4.1e-27   6.1e-23   80.0  10.5     4    56     5    57     2    57 0.97 Ribosomal protein S21
Ribosomal_S2         PF00318.15   211 sp|P21464|RS2_BACSU  -            246   5.2e-91  303.5   0.5   1   1   1.6e-94   5.9e-91  303.3   0.5     1   210     9   224     9   225 0.99 Ribosomal protein S2
Egg_lysin            PF01303.12   121 sp|P21464|RS2_BACSU  -            246    0.0072   16.3   0.1   1   1   4.5e-06     0.017   15.1   0.1    30    69    79   117    70   124 0.83 Egg lysin (Sperm-lysin)
DUF162               PF02589.10   189 sp|P21464|RS2_BACSU  -            246     0.055   12.9   0.0   1   1     3e-05      0.11   11.9   0.0     3    38    55   103    53   172 0.75 Uncharacterised ACR, YkgG family COG1556
Uds1                 PF15456.1    124 sp|P21464|RS2_BACSU  -            246     0.079   12.9   0.6   1   1   5.1e-05      0.19   11.7   0.2    13    38   123   148   106   157 0.87 Up-regulated During Septation
Ribosomal_S3_C       PF00189.15    85 sp|P21465|RS3_BACSU  -            218   6.7e-31  106.3   0.3   1   1   6.2e-34   1.3e-30  105.4   0.1     1    85   118   201   118   201 0.97 Ribosomal protein S3, C-terminal domain
KH_2                 PF07650.12    78 sp|P21465|RS3_BACSU  -            218   5.6e-22   77.0   2.2   1   1   2.6e-25   5.6e-22   77.0   2.2     1    77    37   109    37   110 0.97 KH domain
KH_4                 PF13083.1     73 sp|P21465|RS3_BACSU  -            218   1.8e-06   27.4   0.2   1   1   1.9e-09     4e-06   26.3   0.2     4    60    38    92    35   102 0.76 KH domain
KH_1                 PF00013.24    60 sp|P21465|RS3_BACSU  -            218     0.012   15.2   0.1   1   1   1.4e-05     0.029   13.9   0.1     3    28    64    89    62   112 0.92 KH domain
KH_5                 PF13184.1     69 sp|P21465|RS3_BACSU  -            218     0.022   14.5   1.2   2   2   0.00041      0.87    9.4   0.1     4    44    62   100    59   121 0.82 NusA-like KH domain
LeuA_dimer           PF08502.5    133 sp|P21465|RS3_BACSU  -            218     0.067   12.9   0.2   1   1   4.5e-05     0.095   12.4   0.2    17    79    38   101    24   153 0.74 LeuA allosteric (dimerisation) domain
HrpB4                PF09502.5    217 sp|P21465|RS3_BACSU  -            218      0.08   12.1   0.1   1   1     5e-05      0.11   11.7   0.1    97   156   120   180    56   190 0.81 Bacterial type III secretion protein (HrpB4)
Ribosomal_S4         PF00163.14    94 sp|P21466|RS4_BACSU  -            200   1.9e-26   92.2   0.1   1   1   7.3e-30   3.6e-26   91.3   0.1     1    94     2    91     2    91 0.97 Ribosomal protein S4/S9 N-terminal domain
S4                   PF01479.20    48 sp|P21466|RS4_BACSU  -            200   1.6e-21   75.4   0.3   1   1   5.7e-25   2.8e-21   74.6   0.3     2    48    93   139    92   139 0.97 S4 domain
DUF2666              PF10869.3    131 sp|P21466|RS4_BACSU  -            200      0.15   12.1   0.0   1   1   7.5e-05      0.37   10.8   0.0    32    73   146   190   138   198 0.75 Protein of unknown function (DUF2666)
Ribosomal_S5         PF00333.15    67 sp|P21467|RS5_BACSU  -            166   2.4e-33  113.6   2.7   1   1   5.5e-37   4.1e-33  112.9   2.7     1    66    10    75    10    76 0.98 Ribosomal protein S5, N-terminal domain
Ribosomal_S5_C       PF03719.10    74 sp|P21467|RS5_BACSU  -            166     2e-31  107.0   0.2   1   1   4.3e-35   3.2e-31  106.4   0.2     1    74    85   158    85   158 0.99 Ribosomal protein S5, C-terminal domain
Ribosomal_S6         PF01250.12    92 sp|P21468|RS6_BACSU  -             95   2.8e-34  116.8   0.5   1   1   6.1e-38     3e-34  116.7   0.5     1    91     2    92     2    93 0.99 Ribosomal protein S6
NAS                  PF03059.11   277 sp|P21468|RS6_BACSU  -             95     0.025   13.7   0.0   1   1     6e-06      0.03   13.4   0.0   193   254     3    63     1    94 0.75 Nicotianamine synthase protein
EDR1                 PF14381.1    205 sp|P21468|RS6_BACSU  -             95      0.09   12.3   0.0   1   1   2.2e-05      0.11   12.0   0.0    10    50    41    82    32    91 0.77 Ethylene-responsive protein kinase Le-CTR1
Ribosomal_S7         PF00177.16   148 sp|P21469|RS7_BACSU  -            156     4e-64  214.6   1.2   1   1     3e-68   4.4e-64  214.5   1.2     1   148     1   149     1   149 1.00 Ribosomal protein S7p/S5e
Ribosomal_S8         PF00410.14   129 sp|P12879|RS8_BACSU  -            132   7.2e-52  174.6   0.1   1   1   5.4e-56   8.1e-52  174.4   0.1     1   129     5   132     5   132 0.99 Ribosomal protein S8
Ribosomal_S9         PF00380.14   121 sp|P21470|RS9_BACSU  -            130     1e-47  161.3   0.3   1   1   3.1e-51   1.1e-47  161.1   0.3     1   121    10   130    10   130 1.00 Ribosomal protein S9/S16
Abhydrolase_6        PF12697.2    228 sp|O07015|RSBQ_BACSU -            269   6.4e-39  134.1   0.1   1   1   3.5e-42   7.4e-39  133.9   0.1     1   226    21   258    21   260 0.79 Alpha/beta hydrolase family
Abhydrolase_1        PF00561.15   230 sp|O07015|RSBQ_BACSU -            269   8.2e-18   64.7   0.2   1   1   3.8e-20   8.1e-17   61.5   0.2     1   229    45   262    45   263 0.82 alpha/beta hydrolase fold
Abhydrolase_5        PF12695.2    145 sp|O07015|RSBQ_BACSU -            269   2.8e-15   56.3   0.0   1   1     6e-18   1.3e-14   54.2   0.0     2   131    21   235    20   248 0.88 Alpha/beta hydrolase family
Ndr                  PF03096.9    283 sp|O07015|RSBQ_BACSU -            269   0.00039   18.9   0.0   1   1     3e-07   0.00064   18.2   0.0    78   135    67   124    50   127 0.94 Ndr family
Abhydrolase_4        PF08386.5    103 sp|O07015|RSBQ_BACSU -            269     0.035   13.9   0.0   1   1   3.3e-05      0.07   13.0   0.0    29    91   203   265   181   267 0.83 TAP-like protein
Peptidase_S9         PF00326.16   213 sp|O07015|RSBQ_BACSU -            269     0.053   12.7   0.0   1   1   3.7e-05     0.078   12.1   0.0    12    97    42   121    32   151 0.90 Prolyl oligopeptidase family
Esterase             PF00756.15   251 sp|O07015|RSBQ_BACSU -            269     0.089   12.1   0.0   1   1   5.4e-05      0.12   11.8   0.0   117   148    90   121    75   183 0.85 Putative esterase
STAS                 PF01740.16   117 sp|P17903|RSBV_BACSU -            109   1.6e-16   59.7   0.1   1   1   2.5e-20   1.8e-16   59.5   0.1     2   109     5    99     4   106 0.95 STAS domain
STAS_2               PF13466.1     80 sp|P17903|RSBV_BACSU -            109   1.7e-15   56.8   0.0   1   1   2.7e-19     2e-15   56.5   0.0     2    79    17    94    16    95 0.98 STAS domain
HATPase_c_2          PF13581.1    125 sp|P17904|RSBW_BACSU -            160   9.8e-31  106.1   0.0   1   1   1.5e-34   1.1e-30  105.9   0.0     1   125    12   141    12   141 0.94 Histidine kinase-like ATPase domain
HATPase_c            PF02518.21   111 sp|P17904|RSBW_BACSU -            160   2.1e-10   40.2   0.0   1   1   3.8e-14   2.8e-10   39.8   0.0     3    91    40   130    38   144 0.87 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
DUF258               PF03193.11   161 sp|O34530|RSGA_BACSU -            298   1.8e-58  196.2   0.0   1   1   1.8e-61   2.4e-58  195.8   0.0     2   160   131   288   130   289 0.98 Protein of unknown function, DUF258
MMR_HSR1             PF01926.18   116 sp|O34530|RSGA_BACSU -            298   6.1e-07   29.3   0.0   1   1   1.2e-09   1.7e-06   27.9   0.0     3    59   168   227   166   286 0.71 50S ribosome-binding GTPase
GTP_EFTU             PF00009.22   188 sp|O34530|RSGA_BACSU -            298   0.00017   21.0   0.3   1   2   6.2e-07   0.00083   18.8   0.1    93   151    77   146    67   188 0.67 Elongation factor Tu GTP binding domain
AAA_29               PF13555.1     62 sp|O34530|RSGA_BACSU -            298    0.0002   20.8   0.0   1   1   2.8e-07   0.00037   19.9   0.0    22    44   163   185   154   192 0.88 P-loop containing region of AAA domain
AAA_23               PF13476.1    202 sp|O34530|RSGA_BACSU -            298    0.0014   18.9   0.1   1   1     2e-06    0.0027   18.0   0.0    17    84   162   235   150   288 0.69 AAA domain
ABC_tran             PF00005.22   137 sp|O34530|RSGA_BACSU -            298    0.0018   18.5   0.0   1   1   2.3e-06    0.0031   17.8   0.0    11    42   164   195   161   279 0.81 ABC transporter
SMC_N                PF02463.14   220 sp|O34530|RSGA_BACSU -            298    0.0083   15.3   0.0   1   1     1e-05     0.014   14.6   0.0    17    53   157   193   150   214 0.87 RecF/RecN/SMC N terminal domain
FeoB_N               PF02421.13   156 sp|O34530|RSGA_BACSU -            298     0.018   14.2   0.1   2   2   0.00016      0.21   10.8   0.0     3    67   167   235   165   242 0.76 Ferrous iron transport protein B
AAA_17               PF13207.1    121 sp|O34530|RSGA_BACSU -            298     0.024   15.4   0.6   1   1   4.5e-05     0.061   14.1   0.1     4    32   169   197   167   296 0.82 AAA domain
AAA_16               PF13191.1    185 sp|O34530|RSGA_BACSU -            298     0.045   13.7   0.0   1   1   5.3e-05     0.071   13.0   0.0    27    51   167   191   153   214 0.86 AAA ATPase domain
AAA_18               PF13238.1    129 sp|O34530|RSGA_BACSU -            298     0.054   13.7   0.2   1   1   0.00014      0.19   12.0   0.0     3    23   169   198   168   252 0.74 AAA domain
zf-HC2               PF13490.1     36 sp|Q45588|RSIW_BACSU -            208   5.7e-09   35.7   1.2   1   1   2.3e-12   8.7e-09   35.1   1.2     1    35     3    38     3    39 0.95 Putative zinc-finger
Bactofilin           PF04519.8    101 sp|Q45588|RSIW_BACSU -            208   0.00013   21.9   2.2   1   1   6.6e-08   0.00024   21.0   2.2     3    50   129   178   122   183 0.74 Polymer-forming cytoskeletal
DUF3379              PF11859.3    233 sp|Q45588|RSIW_BACSU -            208     0.082   12.0   0.0   1   1   2.8e-05       0.1   11.7   0.0    23   100    29   109    20   158 0.75 Protein of unknown function (DUF3379)
Antimicrobial_9      PF08104.6     24 sp|Q45588|RSIW_BACSU -            208       0.1   12.4   0.4   1   1   2.7e-05       0.1   12.4   0.4     6    17   188   199   186   200 0.93 Ponericin L family
RrnaAD               PF00398.15   262 sp|P37468|RSMA_BACSU -            292   1.3e-79  266.9   0.3   1   1     1e-82   1.5e-79  266.7   0.3     3   259    21   280    19   283 0.97 Ribosomal RNA adenine dimethylase
Methyltransf_18      PF12847.2    112 sp|P37468|RSMA_BACSU -            292   2.9e-05   24.6   0.0   1   1   3.6e-08   5.3e-05   23.7   0.0     3    64    51   107    49   147 0.86 Methyltransferase domain
Methyltransf_26      PF13659.1    117 sp|P37468|RSMA_BACSU -            292   0.00016   21.7   0.0   1   1   1.6e-07   0.00024   21.1   0.0     4    85    52   135    49   186 0.84 Methyltransferase domain
Methyltransf_31      PF13847.1    152 sp|P37468|RSMA_BACSU -            292   0.00068   19.2   0.0   1   1   7.5e-07    0.0011   18.5   0.0     3   115    48   160    46   196 0.74 Methyltransferase domain
MTS                  PF05175.9    170 sp|P37468|RSMA_BACSU -            292    0.0007   19.0   0.0   1   1   8.1e-07    0.0012   18.2   0.0    26    93    40   106    29   143 0.78 Methyltransferase small domain
NodS                 PF05401.6    201 sp|P37468|RSMA_BACSU -            292    0.0015   17.9   0.1   1   1   1.6e-06    0.0023   17.3   0.1    45   123    50   136    34   163 0.78 Nodulation protein S (NodS)
Cons_hypoth95        PF03602.10   183 sp|P37468|RSMA_BACSU -            292    0.0041   16.5   0.0   1   1   4.5e-06    0.0067   15.8   0.0    41   163    47   166    35   177 0.78 Conserved hypothetical protein 95
Methyltransf_23      PF13489.1    161 sp|P37468|RSMA_BACSU -            292    0.0046   16.6   0.0   1   1   4.8e-06    0.0072   16.0   0.0    22    60    48   109    29   169 0.80 Methyltransferase domain
LCM                  PF04072.9    183 sp|P37468|RSMA_BACSU -            292    0.0079   15.7   0.0   1   2   1.9e-05     0.028   13.9   0.0    62   179    34   141     6   144 0.80 Leucine carboxyl methyltransferase
Methyltransf_11      PF08241.7     95 sp|P37468|RSMA_BACSU -            292     0.034   14.6   0.0   1   1   4.3e-05     0.064   13.7   0.0     2    51    54   103    53   130 0.79 Methyltransferase domain
Nol1_Nop2_Fmu        PF01189.12   283 sp|P94464|RSMB_BACSU -            447   8.4e-64  215.6   0.0   1   1     8e-67   1.1e-63  215.3   0.0     7   281   176   442   170   444 0.95 NOL1/NOP2/sun family
NusB                 PF01029.13   134 sp|P94464|RSMB_BACSU -            447     2e-30  105.5   0.4   1   1   3.4e-33   4.5e-30  104.3   0.4     2   134     5   128     4   128 0.96 NusB family
Methyltransf_31      PF13847.1    152 sp|P94464|RSMB_BACSU -            447   4.3e-12   45.8   0.0   1   1   9.6e-15   1.3e-11   44.3   0.0     2   112   250   383   249   424 0.83 Methyltransferase domain
Methyltransf_26      PF13659.1    117 sp|P94464|RSMB_BACSU -            447     7e-08   32.5   0.0   1   1   1.4e-10   1.9e-07   31.1   0.0     3   116   254   382   252   383 0.83 Methyltransferase domain
FtsJ                 PF01728.14   181 sp|P94464|RSMB_BACSU -            447   1.8e-07   31.3   0.0   1   1   2.1e-10   2.8e-07   30.6   0.0    19   149   247   393   214   412 0.75 FtsJ-like methyltransferase
Methyltransf_18      PF12847.2    112 sp|P94464|RSMB_BACSU -            447   3.8e-06   27.4   0.0   1   1     1e-08   1.4e-05   25.6   0.0     2   112   252   382   251   382 0.72 Methyltransferase domain
Methyltransf_11      PF08241.7     95 sp|P94464|RSMB_BACSU -            447   0.00072   20.0   0.1   1   2   1.9e-05     0.025   15.0   0.0     6    65   264   327   256   333 0.81 Methyltransferase domain
MTS                  PF05175.9    170 sp|P94464|RSMB_BACSU -            447     0.002   17.5   0.0   1   1   2.5e-06    0.0034   16.7   0.0    17   108   237   338   203   387 0.82 Methyltransferase small domain
Methyltransf_24      PF13578.1    106 sp|P94464|RSMB_BACSU -            447    0.0054   17.5   0.0   1   1   2.3e-05     0.031   15.0   0.0     8    81   263   334   259   380 0.78 Methyltransferase domain
Ubie_methyltran      PF01209.13   233 sp|P94464|RSMB_BACSU -            447    0.0084   15.2   0.0   1   1   1.5e-05      0.02   14.0   0.0    41   122   245   328   233   350 0.80 ubiE/COQ5 methyltransferase family
RrnaAD               PF00398.15   262 sp|P94464|RSMB_BACSU -            447     0.076   12.0   0.0   1   1   9.3e-05      0.13   11.3   0.0    22    89   243   312   232   327 0.85 Ribosomal RNA adenine dimethylase
Methyltrans_RNA      PF04452.9    225 sp|P54461|RSME_BACSU -            256   9.1e-77  257.1   0.1   1   1   1.4e-80     1e-76  256.9   0.1     1   225    19   247    19   247 0.95 RNA methyltransferase
Chalcone             PF02431.10   199 sp|P54461|RSME_BACSU -            256    0.0004   19.8   0.1   2   2   1.1e-06    0.0079   15.5   0.0    51   147   117   210    81   223 0.82 Chalcone-flavanone isomerase
GidB                 PF02527.10   184 sp|P25813|RSMG_BACSU -            239   3.2e-63  212.1   0.1   1   1   1.8e-66   3.7e-63  211.9   0.1     1   179    21   204    21   213 0.96 rRNA small subunit methyltransferase G
Methyltransf_31      PF13847.1    152 sp|P25813|RSMG_BACSU -            239   6.8e-13   48.4   0.0   1   1   4.3e-16   9.1e-13   48.0   0.0     3   114    69   178    67   225 0.83 Methyltransferase domain
MTS                  PF05175.9    170 sp|P25813|RSMG_BACSU -            239   0.00083   18.7   0.0   1   1   6.2e-07    0.0013   18.1   0.0     5    89    45   126    42   145 0.80 Methyltransferase small domain
Methyltransf_18      PF12847.2    112 sp|P25813|RSMG_BACSU -            239   0.00092   19.7   0.0   1   1   9.8e-07    0.0021   18.6   0.0     4   108    72   170    70   173 0.75 Methyltransferase domain
Methyltransf_2       PF00891.13   242 sp|P25813|RSMG_BACSU -            239    0.0028   16.9   0.0   1   1   1.9e-06    0.0041   16.3   0.0    94   132    62   100    49   121 0.92 O-methyltransferase
Methyltransf_12      PF08242.7     99 sp|P25813|RSMG_BACSU -            239    0.0032   17.9   0.0   1   1   4.3e-06    0.0092   16.4   0.0     2    75    75   149    74   158 0.79 Methyltransferase domain
Methyltransf_25      PF13649.1    101 sp|P25813|RSMG_BACSU -            239     0.082   13.2   0.0   1   1   7.7e-05      0.16   12.3   0.0     1    73    73   146    73   171 0.84 Methyltransferase domain
Methyltransf_5       PF01795.14   310 sp|Q07876|RSMH_BACSU -            311  7.8e-136  452.3   0.0   1   1  7.7e-139  8.8e-136  452.2   0.0     2   310     2   310     1   310 0.99 MraW methylase family
Methyltransf_31      PF13847.1    152 sp|Q07876|RSMH_BACSU -            311   1.7e-05   24.4   0.0   1   2     4e-05     0.046   13.3   0.0    13    52    31    69    20   122 0.85 Methyltransferase domain
Methyltransf_31      PF13847.1    152 sp|Q07876|RSMH_BACSU -            311   1.7e-05   24.4   0.0   2   2   0.00064      0.73    9.4   0.0    88   122   219   250   158   298 0.78 Methyltransferase domain
Methyltransf_18      PF12847.2    112 sp|Q07876|RSMH_BACSU -            311   0.00034   21.1   0.0   1   2   0.00012      0.14   12.7   0.0    11    77    31   100    29   134 0.73 Methyltransferase domain
Methyltransf_26      PF13659.1    117 sp|Q07876|RSMH_BACSU -            311   0.00043   20.3   0.0   1   1   1.5e-06    0.0017   18.3   0.0     9   115    29   241    21   243 0.65 Methyltransferase domain
Ubie_methyltran      PF01209.13   233 sp|Q07876|RSMH_BACSU -            311    0.0015   17.6   0.0   2   2   8.5e-05     0.097   11.7   0.0   133   168   221   256   211   265 0.86 ubiE/COQ5 methyltransferase family
rRNA_methylase       PF06962.7    140 sp|Q07876|RSMH_BACSU -            311    0.0019   17.9   0.0   1   2    0.0002      0.23   11.1   0.0     2    55    48   102    47   108 0.90 Putative rRNA methylase
FtsJ                 PF01728.14   181 sp|Q07876|RSMH_BACSU -            311    0.0037   17.2   0.0   1   2   0.00011      0.13   12.2   0.0    21   100    18   102     4   178 0.79 FtsJ-like methyltransferase
CRS1_YhbY            PF01985.16    84 sp|Q07876|RSMH_BACSU -            311    0.0062   16.5   0.1   1   1   1.4e-05     0.016   15.1   0.1    32    80   135   183   131   187 0.92 CRS1 / YhbY (CRM) domain
ADH_zinc_N           PF00107.21   130 sp|Q07876|RSMH_BACSU -            311     0.055   13.0   0.0   1   1   0.00024      0.28   10.7   0.0    69    92   221   244   215   261 0.83 Zinc-binding dehydrogenase
TP_methylase         PF00590.15   210 sp|P37544|RSMI_BACSU -            292   5.1e-31  108.0   0.0   1   1   8.9e-35   6.6e-31  107.6   0.0     2   209    17   215    16   216 0.88 Tetrapyrrole (Corrin/Porphyrin) Methylases
Wbp11                PF09429.5     78 sp|P37544|RSMI_BACSU -            292      0.11   12.4   4.6   1   1   3.6e-05      0.27   11.2   4.6    15    74   151   205   149   209 0.81 WW domain binding protein 11
RuvA_N               PF01330.16    61 sp|O05392|RUVA_BACSU -            201   4.4e-20   71.2   3.0   1   1   4.7e-23     7e-20   70.5   0.3     1    61     1    59     1    59 0.99 RuvA N terminal domain
RuvA_C               PF07499.8     47 sp|O05392|RUVA_BACSU -            201   7.8e-13   48.3   1.5   1   1   1.1e-15   1.6e-12   47.3   1.5     2    46   155   199   154   200 0.97 RuvA, C-terminal domain
HHH_5                PF14520.1     60 sp|O05392|RUVA_BACSU -            201   9.9e-08   32.0   1.0   1   1   1.8e-10   2.7e-07   30.6   0.3     2    59    67   126    66   128 0.87 Helix-hairpin-helix domain
HHH                  PF00633.18    30 sp|O05392|RUVA_BACSU -            201   5.5e-05   22.6   0.1   2   2   3.9e-05     0.058   13.1   0.0    17    28   111   122    99   123 0.90 Helix-hairpin-helix motif
Nup35_RRM_2          PF14605.1     53 sp|O05392|RUVA_BACSU -            201    0.0018   18.0   0.0   1   1     3e-06    0.0044   16.7   0.0     6    33   165   193   162   198 0.90 Nup53/35/40-type RNA recognition motif
IMS_HHH              PF11798.3     32 sp|O05392|RUVA_BACSU -            201     0.037   14.0   0.3   2   2   0.00028      0.42   10.7   0.0    15    26   109   120   107   125 0.87 IMS family HHH motif
CPSase_L_D3          PF02787.14   123 sp|O05392|RUVA_BACSU -            201     0.064   13.0   0.2   1   1   7.3e-05      0.11   12.2   0.2    42    89   136   184   134   198 0.84 Carbamoyl-phosphate synthetase large chain, oligomerisation domain
THDPS_N_2            PF14805.1     70 sp|O05392|RUVA_BACSU -            201     0.073   12.9   0.6   1   1   0.00022      0.33   10.8   0.6     5    62   135   195   132   197 0.71 Tetrahydrodipicolinate N-succinyltransferase N-terminal
RuvB_N               PF05496.7    234 sp|O32055|RUVB_BACSU -            334    3e-119  396.2   0.1   1   1  9.6e-122  4.3e-119  395.7   0.1     1   233     4   236     4   237 0.99 Holliday junction DNA helicase ruvB N-terminus
RuvB_C               PF05491.8     76 sp|O32055|RUVB_BACSU -            334   1.4e-33  114.3   0.0   1   1   6.6e-36     3e-33  113.2   0.0     1    75   254   328   254   329 0.98 Holliday junction DNA helicase ruvB C-terminus
AAA                  PF00004.24   132 sp|O32055|RUVB_BACSU -            334   3.7e-20   72.4   0.0   1   1   2.3e-22     1e-19   71.0   0.0     1   129    56   178    56   181 0.94 ATPase family associated with various cellular activities (AAA)
AAA_5                PF07728.9    139 sp|O32055|RUVB_BACSU -            334   4.2e-09   36.2   0.1   1   1   3.6e-10   1.6e-07   31.1   0.1     1   139    55   173    55   173 0.85 AAA domain (dynein-related subfamily)
TIP49                PF06068.8    398 sp|O32055|RUVB_BACSU -            334   3.4e-06   26.0   0.3   1   2   1.6e-06   0.00071   18.4   0.0    25    78    28    81     7    88 0.87 TIP49 C-terminus
AAA_22               PF13401.1    131 sp|O32055|RUVB_BACSU -            334     6e-06   26.4   0.6   1   2   2.3e-05      0.01   15.9   0.0     5    27    54    76    49   103 0.88 AAA domain
Mg_chelatase         PF01078.16   207 sp|O32055|RUVB_BACSU -            334   6.2e-05   22.2   0.2   1   2   6.4e-05     0.029   13.5   0.0    22    42    53    73    25    83 0.67 Magnesium chelatase, subunit ChlI
DUF815               PF05673.8    250 sp|O32055|RUVB_BACSU -            334   7.7e-05   21.7   0.0   1   2   0.00043      0.19   10.6   0.0    27    78    26    78     7   114 0.67 Protein of unknown function (DUF815)
DUF815               PF05673.8    250 sp|O32055|RUVB_BACSU -            334   7.7e-05   21.7   0.0   2   2    0.0012      0.54    9.1   0.0   182   241   169   223   166   231 0.79 Protein of unknown function (DUF815)
AAA_17               PF13207.1    121 sp|O32055|RUVB_BACSU -            334   0.00043   21.0   0.1   1   1   2.4e-06    0.0011   19.8   0.1     2    27    56    81    55   231 0.76 AAA domain
Sigma54_activat      PF00158.21   168 sp|O32055|RUVB_BACSU -            334   0.00065   19.2   0.1   1   2    0.0011      0.48    9.8   0.0     6    44    37    75    30    90 0.80 Sigma-54 interaction domain
AAA_16               PF13191.1    185 sp|O32055|RUVB_BACSU -            334   0.00066   19.7   0.5   1   2   4.1e-05     0.018   15.0   0.0    17    42    44    71    29    86 0.77 AAA ATPase domain
Resolvase            PF00239.16   141 sp|O32055|RUVB_BACSU -            334     0.001   18.9   0.0   1   1   9.4e-06    0.0042   16.9   0.0    39    79    83   124    69   132 0.86 Resolvase, N terminal domain
AAA_24               PF13479.1    213 sp|O32055|RUVB_BACSU -            334    0.0018   17.9   0.2   1   1   1.1e-05     0.005   16.4   0.2     6    21    56    71    54   122 0.91 AAA domain
NB-ARC               PF00931.17   287 sp|O32055|RUVB_BACSU -            334    0.0023   16.8   0.0   1   1   1.2e-05    0.0055   15.5   0.0    16    43    50    77    35    82 0.83 NB-ARC domain
AAA_14               PF13173.1    128 sp|O32055|RUVB_BACSU -            334    0.0026   17.6   0.0   1   1   1.6e-05    0.0073   16.2   0.0     5    84    56   128    52   145 0.68 AAA domain
Sigma54_activ_2      PF14532.1    138 sp|O32055|RUVB_BACSU -            334    0.0033   17.4   0.0   1   1   1.8e-05    0.0081   16.2   0.0    22    94    54   129    30   148 0.77 Sigma-54 interaction domain
Bac_DnaA             PF00308.13   219 sp|O32055|RUVB_BACSU -            334    0.0037   16.9   0.2   1   2   0.00084      0.38   10.3   0.0    25    58    44    77    28    84 0.83 Bacterial dnaA  protein
Rad17                PF03215.10   519 sp|O32055|RUVB_BACSU -            334    0.0051   15.5   0.0   1   1   1.5e-05     0.007   15.1   0.0    14    80    22    88     9    95 0.81 Rad17 cell cycle checkpoint protein
AAA_3                PF07726.6    131 sp|O32055|RUVB_BACSU -            334    0.0052   16.3   0.0   1   1     7e-05     0.031   13.8   0.0     1    28    55    82    55   137 0.93 ATPase family associated with various cellular activities (AAA)
NTPase_1             PF03266.10   168 sp|O32055|RUVB_BACSU -            334    0.0098   15.6   0.1   1   2   0.00053      0.24   11.1   0.0     1    23    55    77    55    94 0.85 NTPase
AAA_19               PF13245.1     76 sp|O32055|RUVB_BACSU -            334     0.015   15.0   0.0   1   1     9e-05     0.041   13.6   0.0    13    33    56    75    40   117 0.80 Part of AAA domain
AAA_18               PF13238.1    129 sp|O32055|RUVB_BACSU -            334     0.016   15.5   0.1   1   1    0.0001     0.045   14.0   0.1     1    27    56    82    56   131 0.82 AAA domain
RNA_helicase         PF00910.17   107 sp|O32055|RUVB_BACSU -            334     0.026   14.7   0.0   1   1   0.00011     0.049   13.8   0.0     1    29    56    84    56   129 0.80 RNA helicase
AAA_33               PF13671.1    143 sp|O32055|RUVB_BACSU -            334     0.042   13.7   0.0   1   1   0.00023      0.11   12.4   0.0     2    26    56    80    56   115 0.89 AAA domain
AAA_25               PF13481.1    194 sp|O32055|RUVB_BACSU -            334     0.054   12.8   0.7   1   1   0.00052      0.23   10.8   0.2    36    54    56    74    51   130 0.76 AAA domain
T2SE                 PF00437.15   272 sp|O32055|RUVB_BACSU -            334     0.065   12.1   0.1   1   1    0.0004      0.18   10.6   0.0    97   152    19    77     9    84 0.82 Type II/IV secretion system protein
Zeta_toxin           PF06414.7    201 sp|O32055|RUVB_BACSU -            334     0.095   11.7   0.0   1   1   0.00036      0.16   11.0   0.0    11    41    48    78    40    86 0.84 Zeta toxin
NACHT                PF05729.7    166 sp|O32055|RUVB_BACSU -            334       0.1   12.2   0.0   1   1   0.00043      0.19   11.3   0.0     3    23    56    76    54    81 0.87 NACHT domain
IstB_IS21            PF01695.12   178 sp|O32055|RUVB_BACSU -            334      0.11   11.9   0.0   1   1   0.00068      0.31   10.4   0.0    48    67    54    73    26    83 0.86 IstB-like ATP binding protein
AAA_28               PF13521.1    163 sp|O32055|RUVB_BACSU -            334      0.11   12.4   0.1   1   1   0.00058      0.26   11.2   0.1     2    25    56    80    55    89 0.85 AAA domain
UPF0081              PF03652.10   135 sp|O34634|RUVX_BACSU -            138   3.3e-44  150.2   0.1   1   1   2.4e-48   3.6e-44  150.1   0.1     1   135     1   136     1   136 0.97 Uncharacterised protein family (UPF0081)
Ribosomal_L7Ae       PF01248.21    95 sp|P46350|RXL7_BACSU -             82   6.9e-16   57.5   1.5   1   1   2.1e-19   7.7e-16   57.3   1.5     9    85     5    80     2    82 0.95 Ribosomal protein L7Ae/L30e/S12e/Gadd45 family
DUF1118              PF06549.7    116 sp|P46350|RXL7_BACSU -             82    0.0057   16.7   0.2   1   1   2.4e-06    0.0087   16.1   0.2    13    47    42    76    33    80 0.89 Protein of unknown function (DUF1118)
PELOTA_1             PF15608.1    102 sp|P46350|RXL7_BACSU -             82     0.058   13.1   0.0   1   1   1.9e-05     0.069   12.9   0.0    46    91    17    63     2    72 0.75 PELOTA RNA binding domain
eRF1_3               PF03465.10   113 sp|P46350|RXL7_BACSU -             82     0.066   13.4   0.3   1   1     6e-05      0.22   11.7   0.3    17    71     8    62     2    78 0.65 eRF1 domain 3
PRD                  PF00874.15    89 sp|P15401|SACY_BACSU -            280   8.3e-50  166.8  16.3   2   3   1.3e-31   9.6e-28   96.1   0.8     1    89    74   162    74   162 0.98 PRD domain
PRD                  PF00874.15    89 sp|P15401|SACY_BACSU -            280   8.3e-50  166.8  16.3   3   3     4e-26   2.9e-22   78.5   5.0     1    88   180   272   180   273 0.98 PRD domain
CAT_RBD              PF03123.10    59 sp|P15401|SACY_BACSU -            280   1.3e-23   82.4   3.4   1   1   3.6e-27   2.7e-23   81.4   3.4     1    59     1    58     1    58 0.97 CAT RNA binding domain
PRD                  PF00874.15    89 sp|P26212|SACT_BACSU -            276   6.1e-48  160.8  14.0   1   2   6.1e-29   4.5e-25   87.5   0.3     1    89    72   160    72   160 0.98 PRD domain
PRD                  PF00874.15    89 sp|P26212|SACT_BACSU -            276   6.1e-48  160.8  14.0   2   2     2e-26   1.5e-22   79.4   5.1     1    88   178   270   178   271 0.98 PRD domain
CAT_RBD              PF03123.10    59 sp|P26212|SACT_BACSU -            276   2.8e-23   81.3   6.3   1   1   8.4e-27   6.2e-23   80.2   6.3     1    58     1    57     1    58 0.96 CAT RNA binding domain
Glyco_hydro_32N      PF00251.15   308 sp|P05656|SACC_BACSU -            677  9.5e-109  363.4   9.2   1   1  2.2e-112  1.6e-108  362.6   9.2     1   308    39   349    39   349 0.93 Glycosyl hydrolases family 32 N-terminal domain
Glyco_hydro_32C      PF08244.7     86 sp|P05656|SACC_BACSU -            677   2.6e-21   75.8   0.1   1   1   1.2e-24   8.9e-21   74.0   0.1     4    86   393   473   388   473 0.93 Glycosyl hydrolases family 32 C terminal
Glyco_hydro_68       PF02435.11   428 sp|P05655|SACB_BACSU -            473  2.1e-164  547.3  13.8   1   1  1.8e-168  2.6e-164  546.9  13.8     5   427    41   469    37   470 0.98 Levansucrase/Invertase
ParA                 PF10609.4     81 sp|P50863|SALA_BACSU -            352   1.3e-23   82.7   0.0   1   1     2e-26   2.5e-23   81.7   0.0     1    81   213   293   213   293 0.99 ParA/MinD ATPase like
CbiA                 PF01656.18   195 sp|P50863|SALA_BACSU -            352   3.7e-16   59.1   0.0   1   1   5.7e-19   7.1e-16   58.1   0.0     1   158   109   276   109   292 0.66 CobQ/CobB/MinD/ParA nucleotide binding domain
AAA_31               PF13614.1    157 sp|P50863|SALA_BACSU -            352   1.6e-09   37.8   0.0   1   2   2.8e-10   3.4e-07   30.3   0.0     3    51   109   157   107   163 0.90 AAA domain
MipZ                 PF09140.6    261 sp|P50863|SALA_BACSU -            352   5.4e-08   32.2   0.0   1   1   9.3e-11   1.1e-07   31.1   0.0     4   108   110   222   107   236 0.63 ATPase MipZ
ArsA_ATPase          PF02374.10   305 sp|P50863|SALA_BACSU -            352   4.3e-07   29.2   1.0   1   2   1.6e-09     2e-06   27.1   0.4     6    38   112   144   107   153 0.92 Anion-transporting ATPase
Fer4_NifH            PF00142.13   273 sp|P50863|SALA_BACSU -            352   8.3e-07   28.4   0.0   1   2   1.4e-07   0.00017   20.8   0.1     6    37   113   144   109   163 0.86 4Fe-4S iron sulfur cluster binding proteins, NifH/frxC family
AAA_25               PF13481.1    194 sp|P50863|SALA_BACSU -            352   0.00017   21.0   0.0   1   1   2.4e-07    0.0003   20.2   0.0     6    61    80   136    76   149 0.89 AAA domain
VirC1                PF07015.6    231 sp|P50863|SALA_BACSU -            352    0.0062   15.6   0.1   1   1   8.9e-06     0.011   14.8   0.1     4    39   109   144   107   146 0.95 VirC1 protein
YhjQ                 PF06564.7    244 sp|P50863|SALA_BACSU -            352    0.0067   15.8   0.1   1   2   3.9e-05     0.048   13.0   0.1     5    38   110   143   107   152 0.90 YhjQ protein
DUF59                PF01883.14    72 sp|P50863|SALA_BACSU -            352    0.0072   16.2   0.2   1   1   1.2e-05     0.014   15.3   0.2     1    56     4    57     4    75 0.73 Domain of unknown function DUF59
ArgK                 PF03308.11   267 sp|P50863|SALA_BACSU -            352     0.054   12.2   0.2   1   1     9e-05      0.11   11.2   0.2    35    66   113   144   108   156 0.92 ArgK protein
SRP54                PF00448.17   196 sp|P50863|SALA_BACSU -            352     0.089   12.2   0.6   1   1   0.00012      0.15   11.5   0.1     7    41   113   147   107   158 0.90 SRP54-type protein, GTPase domain
MgtC                 PF02308.11   135 sp|Q45514|SAPB_BACSU -            232   7.9e-49  164.9   2.0   1   1     2e-52     1e-48  164.6   2.0     1   134    15   152    15   153 0.97 MgtC family
ACT_4                PF13291.1     80 sp|Q45514|SAPB_BACSU -            232     0.032   14.5   0.7   1   1   1.3e-05     0.066   13.5   0.5     7    79   157   228   153   228 0.91 ACT domain
ABC2_membrane_5      PF13346.1    206 sp|Q45514|SAPB_BACSU -            232      0.18   11.0   6.0   1   1   5.3e-05      0.26   10.5   6.0    90   185    15   113    11   139 0.72 ABC-2 family transporter protein
ATP-sulfurylase      PF01747.12   215 sp|O34764|SAT1_BACSU -            382   6.4e-99  329.5   0.0   1   1  1.1e-102   8.1e-99  329.2   0.0     1   214   159   372   159   373 0.99 ATP-sulfurylase
PUA_2                PF14306.1    160 sp|O34764|SAT1_BACSU -            382   5.8e-49  165.5   0.0   1   1   1.2e-52   9.1e-49  164.9   0.0     2   159     4   153     3   154 0.98 PUA-like domain
ATP-sulfurylase      PF01747.12   215 sp|O06736|SAT2_BACSU -            389  1.9e-103  344.3   0.1   2   2  4.4e-107  3.3e-103  343.6   0.0     1   213   160   372   160   374 0.99 ATP-sulfurylase
PUA_2                PF14306.1    160 sp|O06736|SAT2_BACSU -            389   2.4e-48  163.5   0.0   1   1   4.7e-52   3.5e-48  163.0   0.0     2   158     5   153     4   155 0.93 PUA-like domain
SbcCD_C              PF13558.1     90 sp|O06714|SBCC_BACSU -           1130   4.8e-14   52.0   0.1   1   1   9.4e-17   1.5e-13   50.4   0.1    18    89  1017  1085   997  1086 0.81 Putative exonuclease SbcCD, C subunit
AAA_23               PF13476.1    202 sp|O06714|SBCC_BACSU -           1130   2.4e-13   50.8  42.5   1   2   1.5e-16   2.4e-13   50.8  42.5     2   201     6   390     5   391 0.57 AAA domain
AAA_29               PF13555.1     62 sp|O06714|SBCC_BACSU -           1130   2.1e-07   30.3   0.1   1   1   2.9e-10   4.7e-07   29.2   0.1    12    57    14    62    12    65 0.74 P-loop containing region of AAA domain
SMC_N                PF02463.14   220 sp|O06714|SBCC_BACSU -           1130   8.8e-05   21.8  32.1   1   2   1.9e-07   0.00032   19.9   0.1     5    67     6    68     4   139 0.57 RecF/RecN/SMC N terminal domain
SMC_N                PF02463.14   220 sp|O06714|SBCC_BACSU -           1130   8.8e-05   21.8  32.1   2   2   0.00039      0.64    9.2  21.3    57   201   338  1103   294  1116 0.89 RecF/RecN/SMC N terminal domain
AAA_21               PF13304.1    303 sp|O06714|SBCC_BACSU -           1130    0.0029   17.6   0.3   1   1   1.1e-05     0.018   15.0   0.0     3    25    32    57    30   187 0.78 AAA domain
ABC_tran             PF00005.22   137 sp|O06714|SBCC_BACSU -           1130    0.0068   16.7   0.0   1   2   4.1e-06    0.0068   16.7   0.0    13   104    30   123    20   140 0.66 ABC transporter
MMR_HSR1             PF01926.18   116 sp|O06714|SBCC_BACSU -           1130     0.039   13.9   0.4   1   1   0.00014      0.22   11.4   0.0     2    37    31    66    30   148 0.81 50S ribosome-binding GTPase
Metallophos_2        PF12850.2    156 sp|P23479|SBCD_BACSU -            391   1.5e-13   50.8   0.0   1   1   7.6e-17   2.8e-13   49.9   0.0     1   149     1   255     1   261 0.64 Calcineurin-like phosphoesterase superfamily domain
SbcD_C               PF12320.3    100 sp|P23479|SBCD_BACSU -            391   4.4e-11   42.6   0.0   1   1   2.4e-14     9e-11   41.7   0.0     4    99   276   366   273   367 0.93 Type 5 capsule protein repressor C-terminal domain
Metallophos          PF00149.23   200 sp|P23479|SBCD_BACSU -            391   4.7e-11   42.4   0.0   1   1   2.2e-14   8.3e-11   41.6   0.0     1   199     1   223     1   224 0.78 Calcineurin-like phosphoesterase
Metallophos_3        PF14582.1    255 sp|P23479|SBCD_BACSU -            391    0.0053   15.9   0.0   1   1   2.7e-06      0.01   15.0   0.0    12    43    19    50    12    90 0.90 Metallophosphoesterase, calcineurin superfamily
Subtilosin_A         PF11420.3     35 sp|O07623|SBOA_BACSU -             43   2.9e-28   97.5   7.6   1   1   2.2e-32   3.2e-28   97.4   7.6     1    35     9    43     9    43 0.99 Bacteriocin subtilosin A
DUF1290              PF06947.7     88 sp|P28265|SBP_BACSU  -            121   4.2e-37  125.9   3.9   1   1   5.6e-41   4.2e-37  125.9   3.9     1    87    21   107    21   108 0.98 Protein of unknown function (DUF1290)
SCO1-SenC            PF02630.9    174 sp|P54178|SCO1_BACSU -            193   6.3e-69  231.0   0.2   1   1   2.5e-72   7.5e-69  230.7   0.2     1   173     1   173     1   174 0.99 SCO1/SenC
AhpC-TSA             PF00578.16   124 sp|P54178|SCO1_BACSU -            193   3.3e-08   33.2   0.3   1   1   2.3e-11   6.9e-08   32.2   0.3     6   121    33   167    28   170 0.58 AhpC/TSA family
Redoxin              PF08534.5    146 sp|P54178|SCO1_BACSU -            193   4.5e-06   26.2   0.2   1   1   2.5e-09   7.5e-06   25.5   0.2     8   137    34   178    28   191 0.78 Redoxin
Thioredoxin_8        PF13905.1     95 sp|P54178|SCO1_BACSU -            193   0.00069   19.6   0.1   1   1   3.6e-07    0.0011   19.0   0.1     3    93    54   165    52   167 0.63 Thioredoxin-like
GSHPx                PF00255.14   108 sp|P54178|SCO1_BACSU -            193     0.008   15.5   0.0   1   1   5.1e-06     0.015   14.6   0.0     4    80    35   111    32   123 0.75 Glutathione peroxidase
CoA_trans            PF01144.18   217 sp|P42315|SCOA_BACSU -            238     1e-81  273.3   0.6   1   1   8.2e-86   1.2e-81  273.0   0.6     5   216     9   215     5   216 0.98 Coenzyme A transferase
CoA_trans            PF01144.18   217 sp|P42316|SCOB_BACSU -            216     3e-51  173.6   1.7   1   1   7.4e-55   3.7e-51  173.3   1.7     3   216     8   201     6   202 0.97 Coenzyme A transferase
AcetylCoA_hyd_C      PF13336.1    154 sp|P42316|SCOB_BACSU -            216    0.0026   17.4   0.1   1   1   7.3e-07    0.0036   16.9   0.1    37   119   100   173    72   187 0.82 Acetyl-CoA hydrolase/transferase C-terminal domain
DeoRC                PF00455.17   162 sp|P42316|SCOB_BACSU -            216     0.089   12.4   0.1   1   1   0.00017      0.84    9.2   0.1     5   137     3   145     1   176 0.54 DeoR C terminal sensor domain
TerD                 PF02342.13   186 sp|P81100|SCP2_BACSU -            199   1.7e-54  183.9   0.0   1   1   1.3e-58   1.9e-54  183.8   0.0     1   181     1   197     1   199 0.96 TerD domain
ScpA_ScpB            PF02616.9    242 sp|P35154|SCPA_BACSU -            251     5e-70  235.8  14.3   1   1   1.2e-73   5.8e-70  235.6  14.3     1   240    21   243    21   245 0.97 ScpA/B protein
Rad21_Rec8           PF04824.11    55 sp|P35154|SCPA_BACSU -            251    0.0066   15.6   0.0   1   1   2.9e-06     0.014   14.5   0.0    24    50   217   243   214   248 0.91 Conserved region of Rad21 / Rec8 like protein
DUF3016              PF11454.3    141 sp|P35154|SCPA_BACSU -            251     0.016   14.7   1.3   2   2   5.4e-06     0.027   14.0   0.3    11    60   104   153   100   168 0.88 Protein of unknown function (DUF3016)
DUF387               PF04079.11   159 sp|P35155|SCPB_BACSU -            197   5.6e-53  178.5   0.0   1   1   4.5e-57   6.7e-53  178.2   0.0     1   159    10   169    10   169 0.99 Putative transcriptional regulators (Ypuh-like)
Glyco_hydro_32N      PF00251.15   308 sp|P07819|SCRB_BACSU -            479  5.7e-103  344.5   0.5   1   1  2.3e-106  6.9e-103  344.2   0.5     1   308    33   338    33   338 0.97 Glycosyl hydrolases family 32 N-terminal domain
Glyco_hydro_32C      PF08244.7     86 sp|P07819|SCRB_BACSU -            479   2.1e-05   24.8   0.1   1   1   1.3e-08   3.9e-05   23.9   0.1    26    86   393   444   377   444 0.75 Glycosyl hydrolases family 32 C terminal
Glyco_hydro_43       PF04616.9    286 sp|P07819|SCRB_BACSU -            479   2.9e-05   23.3   0.6   1   1   1.9e-08   5.8e-05   22.3   0.6    28   142    65   182    37   250 0.82 Glycosyl hydrolases family 43
BNR_2                PF13088.1    275 sp|P07819|SCRB_BACSU -            479   0.00021   20.6   0.2   1   1   1.2e-07   0.00034   19.9   0.2    11   153    65   204    53   236 0.79 BNR repeat-like domain
DUF377               PF04041.8    312 sp|P07819|SCRB_BACSU -            479      0.02   13.6   0.0   1   2   0.00012      0.36    9.4   0.0    69   134    79   148    70   159 0.77 Domain of unknown function (DUF377)
ROK                  PF00480.15   179 sp|O05510|SCRK_BACSU -            299   3.7e-49  166.9   0.0   1   1   7.3e-53   5.4e-49  166.4   0.0     1   179     4   184     4   184 0.96 ROK family
Phage_gp49_66        PF13876.1     81 sp|O05510|SCRK_BACSU -            299     0.051   13.6   0.1   1   1   1.3e-05       0.1   12.7   0.1    53    80   186   213   182   214 0.90 Phage protein (N4 Gp49/phage Sf6 gene 66) family
SDH_alpha            PF03313.10   283 sp|O34607|SDHAA_BACSU -            300   1.4e-85  286.8  19.5   1   1   1.3e-89   1.9e-85  286.3  19.5     2   282    14   275    13   276 0.98 Serine dehydratase alpha chain
SDH_beta             PF03315.10   158 sp|O34635|SDHAB_BACSU -            220   5.2e-35  120.8   0.1   1   1   1.8e-37   6.6e-34  117.2   0.1     1   156     5   136     5   138 0.89 Serine dehydratase beta chain
ACT                  PF01842.20    66 sp|O34635|SDHAB_BACSU -            220   1.1e-09   37.5   0.4   1   1     7e-13   2.6e-09   36.3   0.4     3    66   149   211   148   211 0.95 ACT domain
ACT_4                PF13291.1     80 sp|O34635|SDHAB_BACSU -            220    0.0038   17.5   1.0   1   1   2.6e-06    0.0096   16.2   1.0     9    79   149   216   145   216 0.82 ACT domain
ACT_5                PF13710.1     63 sp|O34635|SDHAB_BACSU -            220      0.11   12.3   0.0   1   1     6e-05      0.22   11.3   0.0     9    63   163   215   155   215 0.86 ACT domain
FAD_binding_2        PF00890.19   417 sp|P08065|SDHA_BACSU -            586   1.3e-88  297.6   0.0   1   1   1.5e-91   2.2e-88  296.9   0.0     2   417     6   392     5   392 0.96 FAD binding domain
Succ_DH_flav_C       PF02910.15   129 sp|P08065|SDHA_BACSU -            586     6e-38  129.6   0.3   1   1     6e-41   8.9e-38  129.0   0.3     1   129   452   579   452   579 0.97 Fumarate reductase flavoprotein C-term
Pyr_redox_2          PF07992.9    201 sp|P08065|SDHA_BACSU -            586   2.7e-06   27.4   3.9   1   2   1.1e-05     0.017   15.0   1.1     2    36     6    45     5    58 0.84 Pyridine nucleotide-disulphide oxidoreductase
Pyr_redox_2          PF07992.9    201 sp|P08065|SDHA_BACSU -            586   2.7e-06   27.4   3.9   2   2   0.00026      0.39   10.5   0.1   104   196   182   377   140   379 0.59 Pyridine nucleotide-disulphide oxidoreductase
GIDA                 PF01134.17   392 sp|P08065|SDHA_BACSU -            586   7.9e-05   21.6   1.2   1   3   5.3e-08   7.9e-05   21.6   1.2     2    49     6    58     5    64 0.79 Glucose inhibited division protein A
Pyr_redox            PF00070.22    80 sp|P08065|SDHA_BACSU -            586     9e-05   22.8   2.3   2   2   0.00014      0.21   11.9   0.0    11    56   444   492   443   498 0.84 Pyridine nucleotide-disulphide oxidoreductase
HI0933_like          PF03486.9    409 sp|P08065|SDHA_BACSU -            586   0.00045   18.8   4.7   1   3   3.8e-07   0.00056   18.5   0.6     2    29     5    32     4    43 0.94 HI0933-like protein
DAO                  PF01266.19   358 sp|P08065|SDHA_BACSU -            586    0.0042   16.0   0.3   1   2   7.4e-06     0.011   14.6   0.2     2    90     6   122     5   178 0.72 FAD dependent oxidoreductase
FAD_oxidored         PF12831.2    428 sp|P08065|SDHA_BACSU -            586    0.0072   15.4   1.0   1   1   4.9e-06    0.0072   15.4   1.0     2    27     6    31     5    36 0.93 FAD dependent oxidoreductase
NAD_binding_8        PF13450.1     68 sp|P08065|SDHA_BACSU -            586     0.048   13.6   0.5   1   1   0.00011      0.16   11.9   0.5     1    25     8    32     8    36 0.96 NAD(P)-binding Rossmann-like domain
Fer2_3               PF13085.1    110 sp|P08066|SDHB_BACSU -            253   3.1e-27   94.5   1.0   1   1   7.4e-30   6.1e-27   93.6   0.1     2   109     9   117     8   118 0.94 2Fe-2S iron-sulfur cluster binding domain
Fer4_8               PF13183.1     57 sp|P08066|SDHB_BACSU -            253   1.2e-09   38.0   6.8   2   2   2.4e-12   1.9e-09   37.3   3.7     1    57   151   226   151   226 0.81 4Fe-4S dicluster domain
Fer4_7               PF12838.2     52 sp|P08066|SDHB_BACSU -            253   2.6e-08   34.1   4.8   2   3     2e-07   0.00017   21.9   0.1    26    49   143   166    96   169 0.86 4Fe-4S dicluster domain
Fer4_7               PF12838.2     52 sp|P08066|SDHB_BACSU -            253   2.6e-08   34.1   4.8   3   3   0.00063      0.52   10.7   0.1    35    52   209   226   179   226 0.73 4Fe-4S dicluster domain
Fer4_18              PF13746.1     69 sp|P08066|SDHB_BACSU -            253   3.8e-07   30.4   8.4   2   2   1.4e-09   1.1e-06   28.9   0.7     1    67   160   227   160   229 0.94 4Fe-4S dicluster domain
Fer4_17              PF13534.1     61 sp|P08066|SDHB_BACSU -            253   3.4e-06   27.2   7.4   2   2   7.5e-09   6.2e-06   26.4   4.4     1    61   154   227   154   227 0.76 4Fe-4S dicluster domain
Fer4_9               PF13187.1     55 sp|P08066|SDHB_BACSU -            253   3.5e-06   27.1   9.2   2   3   1.5e-05     0.013   15.7   2.1    35    52   145   167    94   171 0.79 4Fe-4S dicluster domain
Fer4_9               PF13187.1     55 sp|P08066|SDHB_BACSU -            253   3.5e-06   27.1   9.2   3   3   5.5e-08   4.5e-05   23.6   6.4     1    55   154   226   154   226 0.84 4Fe-4S dicluster domain
Fer4_10              PF13237.1     52 sp|P08066|SDHB_BACSU -            253   1.3e-05   24.9  13.5   2   3   8.2e-08   6.7e-05   22.5   9.1     4    52   150   223   147   223 0.73 4Fe-4S dicluster domain
Fer4_2               PF12797.2     22 sp|P08066|SDHB_BACSU -            253   0.00059   19.5   1.8   2   3   7.2e-07   0.00059   19.5   1.8     5    22   150   167   148   167 0.88 4Fe-4S binding domain
Fer4                 PF00037.22    24 sp|P08066|SDHB_BACSU -            253    0.0017   17.8   2.8   2   3   2.1e-06    0.0017   17.8   2.8     6    20   153   167   149   168 0.91 4Fe-4S binding domain
Fer4_16              PF13484.1     67 sp|P08066|SDHB_BACSU -            253     0.011   16.4  12.8   2   4    0.0002      0.16   12.7   2.8    37    65   144   166   132   169 0.74 4Fe-4S double cluster binding domain
Fer4_4               PF12800.2     17 sp|P08066|SDHB_BACSU -            253     0.049   13.9   1.2   2   3     6e-05     0.049   13.9   1.2     2    15   153   166   152   180 0.90 4Fe-4S binding domain
Fer4_21              PF14697.1     59 sp|P08066|SDHB_BACSU -            253      0.11   12.3   0.6   1   2   0.00014      0.11   12.3   0.6    37    53   151   167   140   172 0.72 4Fe-4S dicluster domain
Fer4_15              PF13459.1     65 sp|P08066|SDHB_BACSU -            253      0.17   12.5   5.2   1   1   0.00025      0.21   12.1   0.5     6    21   153   168   150   176 0.89 4Fe-4S single cluster domain
Fer4_6               PF12837.2     24 sp|P08066|SDHB_BACSU -            253       8.2    6.4  16.9   2   3   0.00034      0.28   11.1   1.7     7    20   153   166   149   171 0.90 4Fe-4S binding domain
PALP                 PF00291.20   306 sp|P54555|SDHD_BACSU -            448   3.7e-33  115.0   0.0   1   1   3.4e-37     5e-33  114.6   0.0     6   286    76   396    72   416 0.84 Pyridoxal-phosphate dependent enzyme
SecA_DEAD            PF07517.9    266 sp|P28366|SECA_BACSU -            841  2.8e-118  393.9   6.5   1   1  2.6e-121  5.6e-118  393.0   6.5     3   266     7   382     5   382 0.99 SecA DEAD-like domain
SecA_SW              PF07516.8    214 sp|P28366|SECA_BACSU -            841   3.7e-69  232.7  10.4   1   1   1.7e-72   3.7e-69  232.7  10.4     1   214   568   780   568   780 0.98 SecA Wing and Scaffold domain
SecA_PP_bind         PF01043.15   114 sp|P28366|SECA_BACSU -            841   5.8e-43  145.8   2.6   1   1     7e-46   1.5e-42  144.5   2.6     3   114   228   338   226   338 0.98 SecA preprotein cross-linking domain
SEC-C                PF02810.10    21 sp|P28366|SECA_BACSU -            841   2.1e-09   36.6   9.5   1   1   1.6e-12   3.3e-09   36.0   9.5     1    19   821   839   821   841 0.95 SEC-C motif
DEAD                 PF00270.24   169 sp|P28366|SECA_BACSU -            841   1.8e-07   30.8   0.1   1   1   2.4e-10     5e-07   29.3   0.1    17   133    96   214    84   245 0.80 DEAD/DEAH box helicase
Helicase_C           PF00271.26    78 sp|P28366|SECA_BACSU -            841   0.00014   21.6   0.2   1   1   2.4e-07   0.00051   19.8   0.2     1    78   447   530   447   530 0.87 Helicase conserved C-terminal domain
DUF4497              PF14924.1    112 sp|P28366|SECA_BACSU -            841     0.083   13.2   0.0   1   1   0.00012      0.24   11.6   0.0    30   103   414   486   403   495 0.76 Protein of unknown function (DUF4497)
SecD_SecF            PF02355.11   189 sp|O32047|SECDF_BACSU -            737   2.4e-81  271.4  36.3   1   2   2.6e-20   6.4e-17   61.3  14.1    15   187   240   409   230   411 0.90 Protein export membrane protein
SecD_SecF            PF02355.11   189 sp|O32047|SECDF_BACSU -            737   2.4e-81  271.4  36.3   2   2     2e-70     5e-67  224.7  14.3     4   187   543   727   538   729 0.93 Protein export membrane protein
Sec_GG               PF07549.9     31 sp|O32047|SECDF_BACSU -            737   1.1e-13   49.4   0.3   1   2   8.2e-09     2e-05   23.5   0.0     4    28    26    50    23    53 0.88 SecD/SecF GG Motif
Sec_GG               PF07549.9     31 sp|O32047|SECDF_BACSU -            737   1.1e-13   49.4   0.3   2   2   7.7e-09   1.9e-05   23.6   0.0     2    28   469   495   468   498 0.88 SecD/SecF GG Motif
ACR_tran             PF00873.14  1021 sp|O32047|SECDF_BACSU -            737   4.4e-10   37.6   6.7   1   2   1.8e-13   4.4e-10   37.6   6.7   323   505   248   424   219   476 0.82 AcrB/AcrD/AcrF family
MMPL                 PF03176.10   333 sp|O32047|SECDF_BACSU -            737   4.5e-09   35.4   7.7   1   2   1.8e-12   4.5e-09   35.4   7.7   137   312   250   418   204   427 0.87 MMPL family
MttA_Hcf106          PF02416.11    53 sp|O32047|SECDF_BACSU -            737       1.9    7.6  12.8   2   2    0.0001      0.25   10.4   0.8     7    22   682   697   678   704 0.87 mttA/Hcf106 family
SecE                 PF00584.15    57 sp|Q06799|SECE_BACSU -             59   3.2e-21   74.6   4.2   1   1   2.3e-25   3.5e-21   74.5   4.2     2    57     3    58     2    58 0.97 SecE/Sec61-gamma subunits of protein translocation complex
SecG                 PF03840.9     74 sp|O32233|SECG_BACSU -             76   1.1e-26   92.3  10.4   1   1   3.3e-30   1.2e-26   92.2  10.4     2    72     3    75     2    76 0.97 Preprotein translocase SecG subunit
DUF3852              PF12963.2    111 sp|O32233|SECG_BACSU -             76    0.0023   17.9   1.6   1   1   6.6e-07    0.0024   17.8   1.6     7    75     6    75     1    76 0.76 Protein of unknown function (DUF3852)
DUF2749              PF10907.3     66 sp|O32233|SECG_BACSU -             76      0.25   11.2   0.1   1   2   6.7e-05      0.25   11.2   0.1     4    52     3    47     1    50 0.72 Protein of unknown function (DUF2749)
SecY                 PF00344.15   346 sp|P16336|SECY_BACSU -            431  8.9e-109  363.5  29.5   2   2    6e-113  8.9e-109  363.5  29.5     1   346    68   414    68   414 0.93 SecY translocase
DUF552               PF04472.7     73 sp|O31728|SEPF_BACSU -            151   1.3e-32  111.4   0.2   1   1   3.8e-36   1.9e-32  111.0   0.2     1    73    64   136    64   136 0.98 Protein of unknown function (DUF552)
TEX19                PF15553.1    160 sp|O31728|SEPF_BACSU -            151     0.025   14.4   0.6   1   1   6.1e-06      0.03   14.1   0.6    45   134     7    92     1   103 0.67 Testis-expressed protein 19
DUF2981              PF11200.3    318 sp|O31728|SEPF_BACSU -            151     0.096   11.7   0.6   1   1   2.6e-05      0.13   11.3   0.6   262   303    24    65     2    73 0.85 Protein of unknown function (DUF2981)
2-Hacid_dh_C         PF02826.14   178 sp|P35136|SERA_BACSU -            525   6.4e-63  211.1   0.3   1   1   1.4e-65   1.7e-62  209.7   0.0     1   178   104   278   104   278 0.97 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain
2-Hacid_dh           PF00389.25   133 sp|P35136|SERA_BACSU -            525   4.6e-33  113.5   0.4   1   1   6.4e-36   7.9e-33  112.7   0.4     1   133     4   310     4   310 0.94 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain
ACT                  PF01842.20    66 sp|P35136|SERA_BACSU -            525   8.3e-09   34.7   0.6   1   1   2.7e-11   3.4e-08   32.8   0.0     3    65   453   514   451   515 0.94 ACT domain
NAD_binding_2        PF03446.10   163 sp|P35136|SERA_BACSU -            525   9.2e-07   28.8   0.1   1   1   1.9e-09   2.3e-06   27.5   0.1     2   109   139   243   138   251 0.84 NAD binding domain of 6-phosphogluconate dehydrogenase
IlvN                 PF07991.7    165 sp|P35136|SERA_BACSU -            525   6.5e-05   22.3   0.0   1   1   1.5e-07   0.00019   20.8   0.0     2    95   136   229   135   241 0.78 Acetohydroxy acid isomeroreductase, catalytic domain
NAD_binding_7        PF13241.1    103 sp|P35136|SERA_BACSU -            525   0.00043   20.5   0.0   1   1   1.1e-06    0.0013   18.9   0.0     5    76   136   208   134   229 0.83 Putative NAD(P)-binding
F420_oxidored        PF03807.12    96 sp|P35136|SERA_BACSU -            525    0.0021   18.4   0.2   1   1   6.8e-06    0.0085   16.5   0.1     2    93   141   227   140   230 0.78 NADP oxidoreductase coenzyme F420-dependent
AdoHcyase_NAD        PF00670.16   162 sp|P35136|SERA_BACSU -            525    0.0024   17.7   0.6   2   2   2.2e-05     0.027   14.3   0.0    21   104   136   222   127   266 0.79 S-adenosyl-L-homocysteine hydrolase, NAD binding domain
3HCDH_N              PF02737.13   180 sp|P35136|SERA_BACSU -            525    0.0052   16.4   0.1   1   1   1.1e-05     0.014   15.0   0.0     2    38   141   179   140   223 0.79 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain
UDPG_MGDP_dh_C       PF03720.10   106 sp|P35136|SERA_BACSU -            525     0.007   16.4   0.2   1   1   4.2e-05     0.052   13.7   0.0    21    76   152   202   151   225 0.82 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain
ACT_4                PF13291.1     80 sp|P35136|SERA_BACSU -            525     0.021   15.1   1.7   1   1   4.1e-05     0.051   13.9   0.2    10    79   454   520   452   520 0.90 ACT domain
ACT_5                PF13710.1     63 sp|P35136|SERA_BACSU -            525      0.13   12.1   0.1   1   1   0.00038      0.47   10.3   0.1     3    63   461   519   459   519 0.72 ACT domain
Aminotran_5          PF00266.14   371 sp|P80862|SERC_BACSU -            359   2.7e-44  151.4   0.0   1   1   2.1e-48   3.1e-44  151.2   0.0     3   371     6   347     4   347 0.94 Aminotransferase class-V
ACPS                 PF01648.15   115 sp|P39135|SFP_BACSU  -            224   9.9e-17   60.8   0.0   2   2   1.3e-19     2e-15   56.6   0.0     1    86   103   182   103   206 0.86 4'-phosphopantetheinyl transferase superfamily
FtsK_SpoIIIE         PF01580.13   205 sp|C0SP86|SFTA_BACSU -            952   2.7e-70  236.0   0.1   1   1   4.1e-73     5e-70  235.1   0.1     2   205   596   787   595   787 0.98 FtsK/SpoIIIE family
Ftsk_gamma           PF09397.5     67 sp|C0SP86|SFTA_BACSU -            952   1.6e-30  104.5   0.1   1   1   3.2e-33   3.9e-30  103.3   0.1     3    65   883   945   881   947 0.97 Ftsk gamma domain
AAA_10               PF12846.2    304 sp|C0SP86|SFTA_BACSU -            952     7e-09   35.5   0.0   1   2   1.1e-06    0.0013   18.2   0.0     2    39   633   675   632   692 0.87 AAA-like domain
AAA_10               PF12846.2    304 sp|C0SP86|SFTA_BACSU -            952     7e-09   35.5   0.0   2   2   9.6e-06     0.012   15.0   0.0   216   294   736   813   686   822 0.78 AAA-like domain
DUF87                PF01935.12   229 sp|C0SP86|SFTA_BACSU -            952   6.8e-06   26.0   2.3   1   1   1.1e-08   1.4e-05   25.0   0.0    10    60   621   672   615   774 0.86 Domain of unknown function DUF87
AAA_22               PF13401.1    131 sp|C0SP86|SFTA_BACSU -            952     0.001   19.1   0.0   1   1   3.2e-06    0.0039   17.3   0.0     6   122   634   781   629   788 0.77 AAA domain
AAA_25               PF13481.1    194 sp|C0SP86|SFTA_BACSU -            952    0.0075   15.6   0.6   1   1   2.3e-05     0.028   13.8   0.6    36   182   635   777   624   783 0.69 AAA domain
T2SE                 PF00437.15   272 sp|C0SP86|SFTA_BACSU -            952     0.024   13.5   0.0   1   1   4.7e-05     0.057   12.2   0.0   132   153   636   657   541   702 0.74 Type II/IV secretion system protein
DUF853               PF05872.7    504 sp|C0SP86|SFTA_BACSU -            952     0.024   13.0   7.7   1   2   2.3e-05     0.029   12.7   0.0    22    45   633   656   617   674 0.76 Bacterial protein of unknown function (DUF853)
TrwB_AAD_bind        PF10412.4    386 sp|C0SP86|SFTA_BACSU -            952     0.038   12.6   0.0   1   2   0.00015      0.18   10.3   0.0    15    40   632   657   619   674 0.80 Type IV secretion-system coupling protein DNA-binding domain
AAA_29               PF13555.1     62 sp|C0SP86|SFTA_BACSU -            952     0.039   13.4   0.0   1   1     9e-05      0.11   12.0   0.0    24    45   633   654   622   663 0.76 P-loop containing region of AAA domain
DEAD                 PF00270.24   169 sp|C0SP86|SFTA_BACSU -            952     0.072   12.5   0.0   1   1   0.00017      0.21   11.0   0.0    18   133   636   754   624   789 0.54 DEAD/DEAH box helicase
ResIII               PF04851.10   184 sp|C0SP86|SFTA_BACSU -            952     0.079   12.7   1.9   1   1   0.00012      0.15   11.8   0.0    23    56   630   670   585   678 0.76 Type III restriction enzyme, res subunit
Sigma70_r3           PF04539.11    78 sp|P06224|SIGA_BACSU -            371   4.3e-34  116.2   7.5   1   2   3.5e-36     4e-33  113.1   2.2     1    78   217   294   217   294 0.99 Sigma-70 region 3
Sigma70_r4           PF04545.11    50 sp|P06224|SIGA_BACSU -            371   1.8e-25   88.0   6.9   2   3   0.00013      0.15   11.4   0.1    18    44   234   260   220   262 0.80 Sigma-70, region 4
Sigma70_r4           PF04545.11    50 sp|P06224|SIGA_BACSU -            371   1.8e-25   88.0   6.9   3   3   7.9e-24     9e-21   72.9   1.8     1    50   306   359   306   359 0.98 Sigma-70, region 4
Sigma70_r2           PF04542.9     71 sp|P06224|SIGA_BACSU -            371   4.1e-24   83.9   0.4   1   1   6.5e-27   7.4e-24   83.1   0.4     1    71   138   208   138   208 0.98 Sigma-70 region 2
Sigma70_r1_1         PF03979.9     82 sp|P06224|SIGA_BACSU -            371     1e-17   63.8   7.2   1   2   9.9e-20   1.1e-16   60.4   5.6     2    81     9    84     8    87 0.86 Sigma-70 factor, region 1.1
Sigma70_r1_2         PF00140.15    37 sp|P06224|SIGA_BACSU -            371     7e-17   60.8   2.3   1   1   7.7e-20   8.8e-17   60.4   0.2     1    35    99   133    99   135 0.96 Sigma-70 factor, region 1.2
HTH_15               PF12324.3     77 sp|P06224|SIGA_BACSU -            371     0.035   13.7   0.3   1   2   0.00039      0.45   10.2   0.1    27    63   227   261   209   267 0.84 Helix-turn-helix domain of alkylmercury lyase
DUF433               PF04255.9     56 sp|P06224|SIGA_BACSU -            371     0.047   13.1   0.9   1   1   9.2e-05       0.1   11.9   0.0    22    54   227   258   222   260 0.88 Protein of unknown function (DUF433)
Exonuc_VII_L         PF02601.10   319 sp|P06224|SIGA_BACSU -            371      0.06   12.5   0.3   1   1   0.00011      0.12   11.5   0.0   102   167   258   322   249   366 0.73 Exonuclease VII, large subunit
DUF2316              PF10078.4     89 sp|P06224|SIGA_BACSU -            371     0.072   13.0   1.1   1   1   0.00068      0.77    9.7   0.0    25    51   238   264   215   305 0.80 Uncharacterized protein conserved in bacteria (DUF2316)
tify                 PF06200.9     36 sp|P06224|SIGA_BACSU -            371      0.12   11.6   0.0   1   1   0.00022      0.25   10.6   0.0    21    35   247   261   246   262 0.91 tify domain
Sigma70_r2           PF04542.9     71 sp|O31654|SIGI_BACSU -            251   2.4e-11   43.0   0.0   1   1   2.1e-14   5.1e-11   42.0   0.0     1    70    36   106    36   107 0.95 Sigma-70 region 2
HTH_11               PF08279.7     55 sp|O31654|SIGI_BACSU -            251     0.048   13.3   1.3   2   2   6.4e-05      0.16   11.6   0.1     5    46   194   234   190   237 0.77 HTH domain
Histone_HNS          PF00816.16    93 sp|O31654|SIGI_BACSU -            251      0.12   12.9   0.5   2   2   4.8e-05      0.12   12.9   0.5     5    54   129   178   125   189 0.74 H-NS histone family
Sigma70_r2           PF04542.9     71 sp|O07582|SIGM_BACSU -            163   1.3e-18   66.4   0.2   1   1   9.2e-22   2.7e-18   65.3   0.2     1    70     6    72     6    73 0.94 Sigma-70 region 2
Sigma70_r4_2         PF08281.7     54 sp|O07582|SIGM_BACSU -            163   2.6e-12   46.0   0.1   1   1   1.4e-15   4.1e-12   45.3   0.1     7    54   105   152    99   152 0.95 Sigma-70, region 4
Sigma70_r4           PF04545.11    50 sp|O07582|SIGM_BACSU -            163   2.2e-08   33.2   0.0   1   1   1.1e-11   3.4e-08   32.6   0.0     2    50   106   154   105   154 0.97 Sigma-70, region 4
DUF134               PF02001.11   106 sp|O07582|SIGM_BACSU -            163    0.0017   18.2   0.0   1   1   8.9e-07    0.0026   17.6   0.0    47    86   114   153    90   160 0.90 Protein of unknown function  DUF134
Sigma70_ECF          PF07638.6    185 sp|O07582|SIGM_BACSU -            163     0.015   15.0   0.0   1   1   5.3e-06     0.016   14.9   0.0   116   180    88   153     6   158 0.86 ECF sigma factor
Sigma70_r4           PF04545.11    50 sp|O34843|SIGO_BACSU -            176   5.1e-13   48.1   0.0   1   1   3.9e-16   8.3e-13   47.4   0.0     1    50   117   166   117   166 0.98 Sigma-70, region 4
Sigma70_r4_2         PF08281.7     54 sp|O34843|SIGO_BACSU -            176   7.2e-07   28.5   0.0   1   1   5.5e-10   1.2e-06   27.8   0.0     3    51   113   161   112   164 0.90 Sigma-70, region 4
UPF0122              PF04297.9    101 sp|O34843|SIGO_BACSU -            176   2.1e-05   24.4   1.9   1   1   1.2e-08   2.5e-05   24.2   0.4    11    56   112   159   103   175 0.81 Putative helix-turn-helix protein, YlxM / p13 like
DNA_Packaging_2      PF11123.3     82 sp|O34843|SIGO_BACSU -            176   0.00093   19.0   0.3   1   1   7.9e-07    0.0017   18.2   0.3    29    74   110   155    94   163 0.85 DNA packaging protein
GerE                 PF00196.14    58 sp|O34843|SIGO_BACSU -            176    0.0011   18.2   0.2   1   1   7.9e-07    0.0017   17.6   0.2     2    37   119   155   118   172 0.85 Bacterial regulatory proteins, luxR family
Sigma70_ECF          PF07638.6    185 sp|O34843|SIGO_BACSU -            176    0.0067   16.1   0.4   2   2   1.5e-05     0.032   13.8   0.2   124   181   112   170    51   174 0.70 ECF sigma factor
HTH_38               PF13936.1     44 sp|O34843|SIGO_BACSU -            176     0.033   13.7   0.1   1   1   2.5e-05     0.053   13.0   0.1     3    39   119   155   117   160 0.90 Helix-turn-helix domain
Sigma70_r4_2         PF08281.7     54 sp|O05404|SIGV_BACSU -            166   1.4e-16   59.6   0.0   1   1     9e-20   3.3e-16   58.4   0.0     3    53   105   155   103   156 0.96 Sigma-70, region 4
Sigma70_r2           PF04542.9     71 sp|O05404|SIGV_BACSU -            166   3.7e-13   48.8   0.1   1   1   1.6e-16     6e-13   48.2   0.1     2    70    15    81    14    82 0.96 Sigma-70 region 2
Sigma70_r4           PF04545.11    50 sp|O05404|SIGV_BACSU -            166   7.3e-10   38.0   0.2   1   1   4.3e-13   1.6e-09   36.9   0.2     1    49   109   157   109   157 0.97 Sigma-70, region 4
Sigma70_ECF          PF07638.6    185 sp|O05404|SIGV_BACSU -            166     0.023   14.3   0.2   2   2   1.8e-05     0.065   12.8   0.2   110   177    87   158    77   165 0.71 ECF sigma factor
Sigma70_r2           PF04542.9     71 sp|Q45585|SIGW_BACSU -            187   3.5e-21   74.5   0.2   1   1   4.4e-24   7.3e-21   73.5   0.2     3    69    25    89    23    90 0.93 Sigma-70 region 2
Sigma70_r4_2         PF08281.7     54 sp|Q45585|SIGW_BACSU -            187   1.7e-15   56.1   0.0   1   1   2.1e-18   3.4e-15   55.2   0.0     3    54   129   180   127   180 0.96 Sigma-70, region 4
Sigma70_r4           PF04545.11    50 sp|Q45585|SIGW_BACSU -            187   2.8e-12   45.7   0.1   1   1   3.7e-15   6.1e-12   44.6   0.1     4    50   136   182   134   182 0.97 Sigma-70, region 4
Sigma70_ECF          PF07638.6    185 sp|Q45585|SIGW_BACSU -            187   1.4e-08   34.6   0.1   1   1   5.3e-11   8.8e-08   32.0   0.1     6   184     7   185     2   186 0.77 ECF sigma factor
HTH_16               PF12645.2     65 sp|Q45585|SIGW_BACSU -            187   0.00029   20.6   0.5   1   1   7.4e-07    0.0012   18.6   0.2     4    34     9    39     7    55 0.88 Helix-turn-helix domain
DUF1492              PF07374.6    100 sp|Q45585|SIGW_BACSU -            187     0.009   16.1   1.7   2   2   0.00051      0.84    9.7   0.1    48    87   130   168   104   182 0.76 Protein of unknown function (DUF1492)
UPF0122              PF04297.9    101 sp|Q45585|SIGW_BACSU -            187     0.042   13.8   0.1   1   1     8e-05      0.13   12.2   0.0    18    62   137   181   124   186 0.90 Putative helix-turn-helix protein, YlxM / p13 like
HTH_24               PF13412.1     48 sp|Q45585|SIGW_BACSU -            187     0.052   12.9   0.3   1   1   7.9e-05      0.13   11.6   0.0    18    40   153   175   147   175 0.91 Winged helix-turn-helix DNA-binding
HTH_23               PF13384.1     50 sp|Q45585|SIGW_BACSU -            187     0.094   12.3   0.1   2   2   0.00034      0.57    9.9   0.1     7    39   142   175   130   181 0.84 Homeodomain-like domain
Sigma70_r2           PF04542.9     71 sp|P35165|SIGX_BACSU -            194   1.1e-14   53.7   0.4   1   1   7.6e-18   1.9e-14   53.0   0.4     1    69     8    74     8    76 0.98 Sigma-70 region 2
Sigma70_r4_2         PF08281.7     54 sp|P35165|SIGX_BACSU -            194     1e-10   40.9   0.2   1   1   7.4e-14   1.8e-10   40.0   0.2     3    52   110   159   109   161 0.95 Sigma-70, region 4
Sigma70_r4           PF04545.11    50 sp|P35165|SIGX_BACSU -            194   1.6e-09   36.9   0.2   1   1   6.3e-13   1.6e-09   36.9   0.2     1    50   114   163   114   163 0.94 Sigma-70, region 4
Sigma70_ECF          PF07638.6    185 sp|P35165|SIGX_BACSU -            194   7.6e-06   25.7   1.3   1   1   4.3e-09   1.1e-05   25.2   1.3    45   178    26   164     2   172 0.70 ECF sigma factor
HTH_23               PF13384.1     50 sp|P35165|SIGX_BACSU -            194    0.0012   18.4   0.1   1   1   4.9e-07    0.0012   18.4   0.1     3    36   119   152   117   156 0.89 Homeodomain-like domain
HTH_28               PF13518.1     52 sp|P35165|SIGX_BACSU -            194     0.086   12.8   0.1   1   1    0.0001      0.25   11.3   0.1     1    31   122   152   122   159 0.89 Helix-turn-helix domain
Sigma70_r4_2         PF08281.7     54 sp|P94370|SIGY_BACSU -            178   3.6e-13   48.7   0.0   1   1   2.2e-16   6.6e-13   47.9   0.0     6    53   123   170   119   171 0.94 Sigma-70, region 4
Sigma70_r2           PF04542.9     71 sp|P94370|SIGY_BACSU -            178   5.9e-13   48.2   0.1   1   1   3.5e-16     1e-12   47.4   0.1     1    70    24    91    24    92 0.97 Sigma-70 region 2
Sigma70_r4           PF04545.11    50 sp|P94370|SIGY_BACSU -            178     8e-13   47.4   0.1   2   2   1.8e-15   5.4e-12   44.8   0.0     2    50   125   173   124   173 0.97 Sigma-70, region 4
Sigma70_ECF          PF07638.6    185 sp|P94370|SIGY_BACSU -            178   4.3e-10   39.5   0.1   1   1   2.4e-13   7.1e-10   38.8   0.1     5   174     7   166     3   177 0.79 ECF sigma factor
Sigma70_r4_2         PF08281.7     54 sp|O05409|SIGZ_BACSU -            176   3.2e-16   58.5   0.1   1   1     5e-19   6.2e-16   57.6   0.1     3    54    99   150    97   150 0.97 Sigma-70, region 4
Sigma70_r2           PF04542.9     71 sp|O05409|SIGZ_BACSU -            176   9.1e-11   41.2   0.1   1   1   1.3e-13   1.6e-10   40.3   0.1     1    69     6    72     6    74 0.92 Sigma-70 region 2
Sigma70_r4           PF04545.11    50 sp|O05409|SIGZ_BACSU -            176   1.4e-08   33.9   0.4   1   1   1.7e-11     2e-08   33.3   0.4     2    50   104   152   103   152 0.97 Sigma-70, region 4
DUF134               PF02001.11   106 sp|O05409|SIGZ_BACSU -            176     1e-05   25.3   0.0   1   1   1.2e-08   1.5e-05   24.8   0.0    46    92   111   156    67   165 0.73 Protein of unknown function  DUF134
Sigma70_ECF          PF07638.6    185 sp|O05409|SIGZ_BACSU -            176   1.7e-05   24.5   0.1   1   1   5.2e-08   6.5e-05   22.6   0.1    21   182     5   153     2   156 0.72 ECF sigma factor
HTH_24               PF13412.1     48 sp|O05409|SIGZ_BACSU -            176   0.00011   21.5   0.1   1   1   3.4e-07   0.00042   19.6   0.0    17    40   122   145   116   145 0.91 Winged helix-turn-helix DNA-binding
HTH_3                PF01381.17    55 sp|O05409|SIGZ_BACSU -            176    0.0018   18.0   0.1   1   1   5.9e-06    0.0073   16.1   0.1     8    24   121   137   121   139 0.94 Helix-turn-helix
Put_DNA-bind_N       PF06971.8     50 sp|O05409|SIGZ_BACSU -            176     0.014   15.1   0.1   1   1   2.3e-05     0.029   14.1   0.1     5    40   101   134   100   137 0.78 Putative DNA-binding protein N-terminus
HTH_19               PF12844.2     64 sp|O05409|SIGZ_BACSU -            176     0.023   14.7   0.2   1   1   7.1e-05     0.088   12.8   0.0    11    42   121   163   109   175 0.75 Helix-turn-helix domain
HTH_AsnC-type        PF13404.1     42 sp|O05409|SIGZ_BACSU -            176     0.051   13.1   0.0   1   1   9.7e-05      0.12   11.9   0.0    18    40   123   145   121   145 0.95 AsnC-type helix-turn-helix domain
HTH_23               PF13384.1     50 sp|O05409|SIGZ_BACSU -            176      0.11   12.1   0.3   1   1   0.00022      0.27   10.9   0.0     8    32   112   137   105   145 0.84 Homeodomain-like domain
HTH_31               PF13560.1     64 sp|O05409|SIGZ_BACSU -            176      0.14   12.3   0.1   1   1    0.0002      0.25   11.5   0.1     9    38   111   147   104   157 0.82 Helix-turn-helix domain
CbiX                 PF01903.12   105 sp|O34632|SIRB_BACSU -            261   5.6e-52  174.2   0.2   1   2   1.4e-32   6.9e-29  100.0   0.4     1   104    10   114    10   115 0.97 CbiX
CbiX                 PF01903.12   105 sp|O34632|SIRB_BACSU -            261   5.6e-52  174.2   0.2   2   2   5.9e-24   2.9e-20   72.3   0.0     1   103   134   234   134   236 0.97 CbiX
CbiK                 PF06180.6    262 sp|O34632|SIRB_BACSU -            261     3e-06   26.5   0.1   1   2   5.6e-07    0.0028   16.8   0.1   141   218     2    82     1    88 0.75 Cobalt chelatase (CbiK)
TPP_enzyme_M         PF00205.17   137 sp|O34632|SIRB_BACSU -            261     0.067   12.9   0.1   1   3   0.00018      0.89    9.3   0.0    12    47     2    37     1    53 0.86 Thiamine pyrophosphate enzyme, central domain
NAD_binding_7        PF13241.1    103 sp|O34813|SIRC_BACSU -            162   2.2e-25   88.8   0.1   1   1   6.7e-29   3.3e-25   88.3   0.1     2   102     5   111     4   112 0.92 Putative NAD(P)-binding
CPSase_L_chain       PF00289.17   110 sp|O34813|SIRC_BACSU -            162   2.4e-05   24.4   0.1   1   1   7.4e-09   3.6e-05   23.8   0.1     2    75    10    83     9    91 0.94 Carbamoyl-phosphate synthase L chain, N-terminal domain
TrkA_N               PF02254.13   116 sp|O34813|SIRC_BACSU -            162       0.1   12.6   0.6   1   1   6.7e-05      0.33   10.9   0.6     1    84    13    92    13   125 0.80 TrkA-N domain
Radical_SAM          PF04055.16   166 sp|O31423|SKFB_BACSU -            410   2.3e-20   73.4   0.0   1   1     1e-23   3.8e-20   72.7   0.0     3   163   113   264   111   267 0.94 Radical SAM superfamily
Fer4_12              PF13353.1    139 sp|O31423|SKFB_BACSU -            410   3.4e-07   30.4   0.0   1   1   1.9e-10     7e-07   29.4   0.0    12   118   114   213   105   234 0.74 4Fe-4S single cluster domain
Fer4_14              PF13394.1    119 sp|O31423|SKFB_BACSU -            410   0.00011   22.2   0.0   1   1   7.1e-08   0.00026   20.9   0.0     6    90   115   190   112   215 0.66 4Fe-4S single cluster domain
SPASM                PF13186.1     64 sp|O31423|SKFB_BACSU -            410   0.00017   21.8   0.1   1   1   1.4e-07   0.00052   20.2   0.1     1    48   333   378   333   389 0.75 Iron-sulfur cluster-binding domain
ABC_tran             PF00005.22   137 sp|O31427|SKFE_BACSU -            239   1.6e-32  112.6   0.0   1   1   2.5e-35   2.2e-32  112.2   0.0     2   136    20   160    19   161 0.96 ABC transporter
AAA_21               PF13304.1    303 sp|O31427|SKFE_BACSU -            239   7.9e-11   42.4   0.0   1   2   8.8e-07   0.00077   19.5   0.0     2    40    32    71    31    96 0.73 AAA domain
AAA_21               PF13304.1    303 sp|O31427|SKFE_BACSU -            239   7.9e-11   42.4   0.0   2   2   2.8e-07   0.00025   21.1   0.0   225   301   121   194    93   197 0.81 AAA domain
SMC_N                PF02463.14   220 sp|O31427|SKFE_BACSU -            239   8.9e-07   28.3   0.0   2   2   5.6e-07   0.00049   19.3   0.0   119   211   109   205    90   211 0.81 RecF/RecN/SMC N terminal domain
AAA_15               PF13175.1    415 sp|O31427|SKFE_BACSU -            239   0.00014   21.0   0.0   1   2   0.00054      0.47    9.4   0.0    17    43    23    59     8   129 0.71 AAA ATPase domain
AAA_15               PF13175.1    415 sp|O31427|SKFE_BACSU -            239   0.00014   21.0   0.0   2   2   0.00033      0.28   10.1   0.0   372   414   153   194   132   195 0.89 AAA ATPase domain
AAA_23               PF13476.1    202 sp|O31427|SKFE_BACSU -            239   0.00018   21.8   0.0   1   1   2.5e-07   0.00022   21.6   0.0    13    40    20    50     5   133 0.87 AAA domain
AAA_16               PF13191.1    185 sp|O31427|SKFE_BACSU -            239     0.001   19.0   0.1   1   1   2.2e-06    0.0019   18.1   0.1    18    58    23    64    17   158 0.90 AAA ATPase domain
DUF258               PF03193.11   161 sp|O31427|SKFE_BACSU -            239    0.0017   17.5   0.0   1   1   2.5e-06    0.0022   17.2   0.0    18    60    11    54     1   138 0.87 Protein of unknown function, DUF258
AAA_29               PF13555.1     62 sp|O31427|SKFE_BACSU -            239    0.0018   17.7   0.0   1   1   4.6e-06     0.004   16.6   0.0    16    44    23    50    15    60 0.77 P-loop containing region of AAA domain
SRP54                PF00448.17   196 sp|O31427|SKFE_BACSU -            239     0.006   16.0   0.0   1   1   1.3e-05     0.012   15.0   0.0     3    33    31    61    29    65 0.85 SRP54-type protein, GTPase domain
AAA_22               PF13401.1    131 sp|O31427|SKFE_BACSU -            239     0.015   15.4   0.1   1   1   3.3e-05     0.029   14.5   0.1     3    28    28    53    26   187 0.78 AAA domain
UPF0079              PF02367.12   123 sp|O31427|SKFE_BACSU -            239     0.015   14.9   0.0   1   1   3.4e-05     0.029   13.9   0.0    10    36    24    50    19    60 0.85 Uncharacterised P-loop hydrolase UPF0079
AAA_19               PF13245.1     76 sp|O31427|SKFE_BACSU -            239     0.044   13.5   0.1   1   1   0.00011       0.1   12.3   0.1    10    30    29    49    23    64 0.78 Part of AAA domain
AAA_30               PF13604.1    196 sp|O31427|SKFE_BACSU -            239     0.095   12.2   0.0   1   1   0.00024      0.21   11.1   0.0    18    48    29    59    19    69 0.79 AAA domain
MMR_HSR1             PF01926.18   116 sp|O31427|SKFE_BACSU -            239      0.16   11.9   0.1   1   1   0.00093      0.82    9.6   0.1     2    21    32    51    31   234 0.63 50S ribosome-binding GTPase
T2SE                 PF00437.15   272 sp|O31427|SKFE_BACSU -            239      0.17   10.7   0.0   1   1   0.00035       0.3    9.9   0.0   117   167    18    67     2    98 0.74 Type II/IV secretion system protein
Hydrolase_2          PF07486.7    108 sp|P50739|SLEB_BACSU -            305   7.1e-32  110.1   0.8   2   2   7.2e-35   5.4e-31  107.3   0.0     1   108   205   305   205   305 0.96 Cell Wall Hydrolase
PG_binding_1         PF01471.13    57 sp|P50739|SLEB_BACSU -            305   4.6e-16   58.5   1.0   1   1   1.2e-19   8.9e-16   57.6   1.0     1    57    40    97    40    97 0.96 Putative peptidoglycan binding domain
SMC_N                PF02463.14   220 sp|P51834|SMC_BACSU  -           1186     3e-69  232.6  26.8   1   1   5.3e-72   8.7e-69  231.0  26.8     1   219     2  1171     2  1172 1.00 RecF/RecN/SMC N terminal domain
SMC_hinge            PF06470.8    120 sp|P51834|SMC_BACSU  -           1186   2.7e-30  104.7   0.1   1   1   5.7e-33   9.5e-30  103.0   0.1     3   120   519   637   517   637 0.92 SMC proteins Flexible Hinge Domain
AAA_21               PF13304.1    303 sp|P51834|SMC_BACSU  -           1186   7.3e-15   55.6  11.8   1   2   1.5e-10   2.4e-07   31.0   1.8     1   118    26   148    26   372 0.76 AAA domain
AAA_21               PF13304.1    303 sp|P51834|SMC_BACSU  -           1186   7.3e-15   55.6  11.8   2   2   5.7e-10   9.5e-07   29.0   2.4   102   297   945  1149   736  1150 0.76 AAA domain
AAA_23               PF13476.1    202 sp|P51834|SMC_BACSU  -           1186   1.2e-07   32.3  43.1   1   1   7.1e-11   1.2e-07   32.3  43.1     2   199     6   330     5   391 0.53 AAA domain
AAA_29               PF13555.1     62 sp|P51834|SMC_BACSU  -           1186   2.7e-06   26.7   0.0   1   1   3.3e-09   5.4e-06   25.8   0.0     1    48     3    49     3    57 0.85 P-loop containing region of AAA domain
DUF2647              PF10839.3     71 sp|P51834|SMC_BACSU  -           1186      0.04   13.9   0.0   1   1   5.5e-05      0.09   12.8   0.0    20    43  1034  1057  1023  1072 0.85 Protein of unknown function (DUF2647)
ABC_tran             PF00005.22   137 sp|P51834|SMC_BACSU  -           1186     0.091   13.0   0.0   1   2   5.5e-05     0.091   13.0   0.0     6    32    20    45    15    99 0.83 ABC transporter
Reo_sigmaC           PF04582.7    326 sp|P51834|SMC_BACSU  -           1186         6    5.9  35.3   3   4   4.8e-05     0.078   12.1   2.0    30   128   679   784   668   791 0.55 Reovirus sigma C capsid protein
AAA_13               PF13166.1    712 sp|P51834|SMC_BACSU  -           1186       6.4    5.1 108.0   4   5   8.8e-05      0.14   10.5   7.6   384   484   670   765   663   769 0.80 AAA domain
DNA_processg_A       PF02481.10   212 sp|P39813|SMF_BACSU  -            297   2.2e-77  258.7   0.0   1   1     2e-81   2.9e-77  258.3   0.0     2   210    70   276    69   278 0.97 DNA recombination-mediator protein A
Sod_Fe_C             PF02777.13   106 sp|O35023|SODF_BACSU -            281   8.5e-37  125.2   2.0   2   2   4.4e-40   1.3e-36  124.6   0.8     2   106   166   270   164   270 0.99 Iron/manganese superoxide dismutases, C-terminal domain
Sod_Fe_N             PF00081.17    82 sp|O35023|SODF_BACSU -            281   1.1e-26   92.8   4.7   1   2   3.8e-30   1.1e-26   92.8   4.7     1    81    79   159    79   160 0.97 Iron/manganese superoxide dismutases, alpha-hairpin domain
Peptidase_C65        PF10275.4    244 sp|O35023|SODF_BACSU -            281     0.035   13.4   0.6   1   1   1.8e-05     0.052   12.8   0.6    54   122     6    72     5   124 0.88 Peptidase C65 Otubain
Bacillus_HBL         PF05791.6    184 sp|O35023|SODF_BACSU -            281       0.1   11.9   1.9   1   1     6e-05      0.18   11.1   1.9    61   128     7    71     2    74 0.89 Bacillus haemolytic enterotoxin (HBL)
HSCB_C               PF07743.8     78 sp|O35023|SODF_BACSU -            281       2.7    8.5   8.5   1   2   0.00014      0.42   11.1   3.0     9    60     9    56     8    63 0.74 HSCB C-terminal oligomerisation domain
Sod_Fe_C             PF02777.13   106 sp|P54375|SODM_BACSU -            202   3.4e-47  158.6   0.1   1   1   9.2e-51   6.8e-47  157.6   0.1     1   105    95   197    95   198 0.98 Iron/manganese superoxide dismutases, C-terminal domain
Sod_Fe_N             PF00081.17    82 sp|P54375|SODM_BACSU -            202     2e-34  117.6   1.9   1   1   4.5e-38   3.3e-34  116.9   1.9     1    82     2    90     2    90 0.96 Iron/manganese superoxide dismutases, alpha-hairpin domain
CbiA                 PF01656.18   195 sp|P37522|SOJ_BACSU  -            253   1.4e-49  168.1   1.8   1   1   1.3e-52   1.6e-49  167.9   1.8     1   195     5   221     5   221 0.87 CobQ/CobB/MinD/ParA nucleotide binding domain
MipZ                 PF09140.6    261 sp|P37522|SOJ_BACSU  -            253   1.1e-13   50.9   0.3   1   1   1.1e-14   1.4e-11   43.9   0.3     2   136     4   156     3   181 0.66 ATPase MipZ
AAA_31               PF13614.1    157 sp|P37522|SOJ_BACSU  -            253   2.4e-13   50.2   0.1   1   1   5.8e-16   7.2e-13   48.7   0.1     1   153     3   153     3   156 0.81 AAA domain
Fer4_NifH            PF00142.13   273 sp|P37522|SOJ_BACSU  -            253   2.3e-11   43.4   1.1   1   1   6.3e-14   7.8e-11   41.6   1.1     7   248    10   252     3   253 0.76 4Fe-4S iron sulfur cluster binding proteins, NifH/frxC family
YhjQ                 PF06564.7    244 sp|P37522|SOJ_BACSU  -            253   7.2e-10   38.6   0.0   1   1   1.1e-12   1.4e-09   37.6   0.0     3   232     4   246     2   252 0.75 YhjQ protein
ArsA_ATPase          PF02374.10   305 sp|P37522|SOJ_BACSU  -            253   1.4e-09   37.4   1.2   1   1   1.2e-11   1.5e-08   34.0   1.2     8   137    10   129     3   213 0.74 Anion-transporting ATPase
SRP54                PF00448.17   196 sp|P37522|SOJ_BACSU  -            253   0.00016   21.1   1.0   1   2   0.00043      0.53    9.6   0.3    11    39    13    41     4    85 0.86 SRP54-type protein, GTPase domain
SRP54                PF00448.17   196 sp|P37522|SOJ_BACSU  -            253   0.00016   21.1   1.0   2   2   0.00061      0.76    9.1   0.1    38   159    72   195    70   203 0.62 SRP54-type protein, GTPase domain
VirC1                PF07015.6    231 sp|P37522|SOJ_BACSU  -            253   0.00095   18.3   1.1   1   2     6e-06    0.0074   15.3   0.1     2    39     3    40     2    47 0.92 VirC1 protein
AAA_19               PF13245.1     76 sp|P37522|SOJ_BACSU  -            253     0.009   15.7   0.0   1   1   1.6e-05      0.02   14.6   0.0    20    55    13    46    12    65 0.87 Part of AAA domain
ArgK                 PF03308.11   267 sp|P37522|SOJ_BACSU  -            253     0.025   13.3   0.3   1   1     4e-05      0.05   12.3   0.3    31    74     4    48     2    55 0.86 ArgK protein
FTHFS                PF01268.14   557 sp|P37522|SOJ_BACSU  -            253     0.043   11.7   0.2   1   1     6e-05     0.075   11.0   0.2    59    91     4    36     2    46 0.91 Formate--tetrahydrofolate ligase
ATP_bind_1           PF03029.12   238 sp|P37522|SOJ_BACSU  -            253     0.055   13.0   0.3   1   1   0.00025       0.3   10.5   0.3     6    99    13   127    11   141 0.57 Conserved hypothetical ATP binding protein
SpoOE-like           PF09388.5     45 sp|P05043|SP0E_BACSU -             85   3.6e-19   68.0   0.2   1   1   3.3e-23   4.9e-19   67.5   0.2     2    44    10    52     9    53 0.96 Spo0E like sporulation regulatory protein
ParBc                PF02195.13    90 sp|P26497|SP0J_BACSU -            282   3.6e-24   84.6   1.6   1   1   4.3e-27   4.2e-24   84.4   0.2     1    89    24   112    24   113 0.96 ParB-like nuclease domain
KorB                 PF08535.5     93 sp|P26497|SP0J_BACSU -            282   4.8e-08   33.0   0.3   1   1   3.4e-10   3.4e-07   30.3   0.0     5    76   137   205   135   226 0.75 KorB domain
HTH_3                PF01381.17    55 sp|P26497|SP0J_BACSU -            282   0.00014   21.6   0.0   1   1   7.1e-07    0.0007   19.3   0.0     4    27   130   153   129   154 0.91 Helix-turn-helix
TrmB                 PF01978.14    68 sp|P26497|SP0J_BACSU -            282   0.00047   19.8   0.0   1   1   1.7e-06    0.0017   18.0   0.0    10    46   123   159   113   166 0.92 Sugar-specific transcriptional regulator TrmB
HTH_37               PF13744.1     80 sp|P26497|SP0J_BACSU -            282     0.015   15.0   0.9   1   1   6.7e-05     0.066   13.0   0.1    25    52   129   156   121   160 0.89 Helix-turn-helix domain
HTH_Crp_2            PF13545.1     76 sp|P26497|SP0J_BACSU -            282     0.019   14.7   0.3   1   1   0.00011      0.11   12.2   0.1    24    52   131   159   119   194 0.84 Crp-like helix-turn-helix domain
RRM_5                PF13893.1     56 sp|P26497|SP0J_BACSU -            282     0.032   14.0   0.1   1   1   0.00023      0.22   11.3   0.0     8    39   245   275   240   280 0.88 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain)
POTRA_2              PF08479.6     76 sp|P26497|SP0J_BACSU -            282     0.043   13.4   0.6   1   1   0.00028      0.28   10.8   0.4    16    45   188   217   179   219 0.90 POTRA domain, ShlB-type
HTH_19               PF12844.2     64 sp|P26497|SP0J_BACSU -            282     0.048   13.7   0.1   1   1    0.0002       0.2   11.7   0.0     7    29   130   152   125   156 0.90 Helix-turn-helix domain
HTH_23               PF13384.1     50 sp|P26497|SP0J_BACSU -            282     0.062   12.9   0.3   1   1   0.00032      0.32   10.7   0.0    15    40   131   158   118   169 0.77 Homeodomain-like domain
MarR_2               PF12802.2     62 sp|P26497|SP0J_BACSU -            282     0.073   12.7   0.1   1   1   0.00022      0.21   11.2   0.1     9    45   108   159   104   160 0.82 MarR family
PCP_red              PF08369.5     45 sp|P26497|SP0J_BACSU -            282     0.097   12.5   0.0   1   1   0.00077      0.76    9.6   0.0     2    21    43    70    43    72 0.95 Proto-chlorophyllide reductase 57 kD subunit
HTH_5                PF01022.15    47 sp|P26497|SP0J_BACSU -            282      0.13   11.9   2.9   1   1   0.00014      0.14   11.8   0.4    16    39   136   159   128   160 0.85 Bacterial regulatory protein, arsR family
HTH_24               PF13412.1     48 sp|P26497|SP0J_BACSU -            282      0.14   11.5   3.2   1   1   0.00015      0.15   11.4   0.1    18    41   136   159   129   160 0.91 Winged helix-turn-helix DNA-binding
Spo0M                PF07070.6    218 sp|P71088|SP0M_BACSU -            258   3.9e-98  327.1   0.1   1   1  1.2e-101   4.6e-98  326.8   0.1     1   218     4   221     4   221 1.00 SpoOM protein
Arrestin_N           PF00339.24   149 sp|P71088|SP0M_BACSU -            258   6.2e-07   29.3   0.7   1   1   1.1e-09   4.2e-06   26.6   0.7     9   111    24   107    18   111 0.74 Arrestin (or S-antigen), N-terminal domain
Arrestin_C           PF02752.17   136 sp|P71088|SP0M_BACSU -            258   9.5e-05   22.5   0.0   1   1   5.7e-08   0.00021   21.4   0.0     7    93    18   103    14   147 0.79 Arrestin (or S-antigen), C-terminal domain
STAS                 PF01740.16   117 sp|P10727|SP2AA_BACSU -            117   4.5e-27   93.8   0.1   1   1     1e-30     5e-27   93.6   0.1     2   117     5   109     4   109 0.97 STAS domain
STAS_2               PF13466.1     80 sp|P10727|SP2AA_BACSU -            117   5.6e-15   55.1   0.0   1   1   1.6e-18   7.7e-15   54.7   0.0     1    79    16    96    16    96 0.96 STAS domain
SpoIIAA-like         PF11964.3    109 sp|P10727|SP2AA_BACSU -            117    0.0084   16.3   0.0   1   1     2e-06    0.0098   16.1   0.0     2    55    13    65    12   110 0.81 SpoIIAA-like
HATPase_c_2          PF13581.1    125 sp|P10728|SP2AB_BACSU -            146   1.9e-25   89.0   0.0   1   1   4.3e-29   2.1e-25   88.9   0.0     2   125    10   136     9   136 0.94 Histidine kinase-like ATPase domain
HATPase_c            PF02518.21   111 sp|P10728|SP2AB_BACSU -            146   1.6e-15   56.7   0.1   1   1     4e-19     2e-15   56.4   0.1     5   109    39   137    35   139 0.94 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
HATPase_c_5          PF14501.1    100 sp|P10728|SP2AB_BACSU -            146     0.098   12.3   0.0   1   1   2.9e-05      0.14   11.8   0.0     4    78    38   118    35   130 0.76 GHKL domain
Peptidase_U4         PF03419.8    293 sp|P13801|SP2G_BACSU -            309  3.6e-111  370.9   1.2   1   1  5.5e-115  4.1e-111  370.7   1.2     1   293     1   300     1   300 1.00 Sporulation factor SpoIIGA
SpoIISA_toxin        PF14171.1    240 sp|O34853|SP2SA_BACSU -            248  4.5e-113  376.4  10.7   1   1  1.7e-116  5.1e-113  376.2  10.7     1   239     2   240     2   241 0.99 Toxin SpoIISA, type II toxin-antitoxin system
GST_C                PF00043.20    95 sp|O34853|SP2SA_BACSU -            248     0.048   13.6   0.1   1   2   0.00011      0.32   11.0   0.1     9    54    82   127    74   131 0.87 Glutathione S-transferase, C-terminal domain
DUF1129              PF06570.6    206 sp|O34853|SP2SA_BACSU -            248      0.44    9.8   5.1   1   1   0.00025      0.73    9.1   5.1   115   199     6    89     4    92 0.90 Protein of unknown function (DUF1129)
DUF998               PF06197.8    184 sp|O34853|SP2SA_BACSU -            248       0.6    9.4   4.9   1   1   0.00027      0.81    8.9   4.9   110   178     1    76     1    80 0.85 Protein of unknown function (DUF998)
SpoIISB_antitox      PF14185.1     56 sp|O34800|SP2SB_BACSU -             56   7.9e-34  115.1   2.3   1   1   5.8e-38   8.6e-34  115.0   2.3     1    56     1    56     1    56 0.99 Antitoxin SpoIISB, type II toxin-antitoxin system
FtsK_SpoIIIE         PF01580.13   205 sp|P21458|SP3E_BACSU -            787   1.3e-68  230.5   0.1   1   1   2.2e-71   2.5e-68  229.5   0.1     2   205   424   620   423   620 0.98 FtsK/SpoIIIE family
Ftsk_gamma           PF09397.5     67 sp|P21458|SP3E_BACSU -            787   1.2e-30  104.9   1.9   1   1   1.3e-33   1.4e-30  104.7   0.1     3    66   716   779   714   780 0.96 Ftsk gamma domain
AAA_10               PF12846.2    304 sp|P21458|SP3E_BACSU -            787   2.9e-09   36.8   0.2   1   2   2.4e-06    0.0027   17.1   0.1     2    38   461   501   460   506 0.92 AAA-like domain
AAA_10               PF12846.2    304 sp|P21458|SP3E_BACSU -            787   2.9e-09   36.8   0.2   2   2   2.3e-06    0.0026   17.2   0.0   214   295   563   648   515   653 0.81 AAA-like domain
DUF4117              PF13491.1    171 sp|P21458|SP3E_BACSU -            787     3e-05   23.5  15.8   1   1   1.7e-06    0.0019   17.6  15.4    47   170    38   188    37   189 0.73 Domain of unknown function (DUF4117)
DUF87                PF01935.12   229 sp|P21458|SP3E_BACSU -            787   0.00013   21.9   0.7   1   1   4.6e-07   0.00053   19.8   0.2    14    61   453   501   442   607 0.73 Domain of unknown function DUF87
AAA_22               PF13401.1    131 sp|P21458|SP3E_BACSU -            787     0.002   18.2   0.0   1   1     4e-06    0.0046   17.1   0.0     6   123   462   615   457   622 0.76 AAA domain
T2SE                 PF00437.15   272 sp|P21458|SP3E_BACSU -            787    0.0023   16.8   0.2   2   2   1.4e-05     0.015   14.1   0.1   126   153   458   485   446   511 0.77 Type II/IV secretion system protein
TrwB_AAD_bind        PF10412.4    386 sp|P21458|SP3E_BACSU -            787    0.0066   15.1   0.0   1   1   1.4e-05     0.016   13.8   0.0    15    43   460   492   452   518 0.81 Type IV secretion-system coupling protein DNA-binding domain
DUF2075              PF09848.4    352 sp|P21458|SP3E_BACSU -            787     0.026   13.5   0.0   1   1   5.4e-05     0.062   12.2   0.0     4    96   463   587   461   616 0.71 Uncharacterized conserved protein (DUF2075)
AAA_29               PF13555.1     62 sp|P21458|SP3E_BACSU -            787     0.032   13.7   0.0   1   1   6.1e-05      0.07   12.6   0.0    24    45   461   482   450   493 0.78 P-loop containing region of AAA domain
Peptidase_M50        PF02163.17   192 sp|P26937|SP4FB_BACSU -            288   3.2e-17   62.1  11.4   1   1   1.3e-18     1e-14   53.9  11.3     2   188    32   174    31   186 0.77 Peptidase family M50
GerA                 PF03323.8    470 sp|P31845|SP5AF_BACSU -            493  1.3e-161  537.8   3.6   1   1    1e-165  1.5e-161  537.7   3.6     1   470    18   482    18   482 0.98 Bacillus/Clostridium GerA spore germination protein
Polysacc_synt        PF01943.12   273 sp|Q00758|SP5B_BACSU -            518   2.1e-64  217.4  21.6   1   2   8.7e-68   2.1e-64  217.4  21.6     2   272     7   307     6   308 0.98 Polysaccharide biosynthesis protein
Polysacc_synt_C      PF14667.1    146 sp|Q00758|SP5B_BACSU -            518   1.1e-15   57.7  24.5   2   3   1.2e-05     0.029   14.1   4.6     4    91   126   222   123   272 0.77 Polysaccharide biosynthesis C-terminal domain
Polysacc_synt_C      PF14667.1    146 sp|Q00758|SP5B_BACSU -            518   1.1e-15   57.7  24.5   3   3   4.4e-19   1.1e-15   57.7  24.5     3   146   360   500   358   500 0.91 Polysaccharide biosynthesis C-terminal domain
Polysacc_synt_3      PF13440.1    251 sp|Q00758|SP5B_BACSU -            518   2.7e-12   46.6  50.2   1   2   5.2e-15   1.3e-11   44.4  17.7     3   205    23   237    22   308 0.75 Polysaccharide biosynthesis protein
MatE                 PF01554.13   162 sp|Q00758|SP5B_BACSU -            518   7.1e-11   41.9  27.1   2   3   2.5e-11   6.2e-08   32.4   8.0     8   159    19   167    13   170 0.89 MatE
MatE                 PF01554.13   162 sp|Q00758|SP5B_BACSU -            518   7.1e-11   41.9  27.1   3   3   1.2e-08   2.9e-05   23.7  11.1    26   156   267   399   238   405 0.82 MatE
MVIN                 PF03023.9    452 sp|Q00758|SP5B_BACSU -            518   3.2e-08   32.4  43.4   1   2   3.5e-06    0.0086   14.5   3.4   205   307    12   114     4   120 0.93 MviN-like protein
MVIN                 PF03023.9    452 sp|Q00758|SP5B_BACSU -            518   3.2e-08   32.4  43.4   2   2   1.2e-08   2.9e-05   22.7  32.9   103   434   127   470   109   480 0.71 MviN-like protein
Syndecan             PF01034.15    64 sp|Q00758|SP5B_BACSU -            518    0.0031   17.1   0.1   4   4   1.2e-06    0.0031   17.1   0.1    13    41   477   505   470   506 0.90 Syndecan domain
Transpeptidase       PF00905.17   304 sp|Q03524|SP5D_BACSU -            646   2.4e-92  309.2   0.1   2   2   4.8e-96   2.4e-92  309.2   0.1     1   303   246   556   246   557 0.98 Penicillin binding protein transpeptidase domain
PBP_dimer            PF03717.10   179 sp|Q03524|SP5D_BACSU -            646     5e-35  121.1   0.1   1   2   1.3e-37   6.4e-34  117.5   0.1     3   175    56   202    54   206 0.93 Penicillin-binding Protein dimerisation domain
PASTA                PF03793.14    63 sp|Q03524|SP5D_BACSU -            646   5.3e-13   48.4   1.0   2   2   1.1e-16   5.3e-13   48.4   1.0     1    62   584   637   584   638 0.95 PASTA domain
FTSW_RODA_SPOVE      PF01098.14   359 sp|P07373|SP5E_BACSU -            366  2.9e-132  440.8  34.2   1   1  2.2e-136  3.3e-132  440.6  34.2     3   358    11   365     9   366 0.98 Cell cycle protein
SpoVG                PF04026.7     84 sp|P28015|SP5G_BACSU -             97   1.2e-36  124.6   0.0   1   1   8.8e-41   1.3e-36  124.4   0.0     1    82     1    82     1    84 0.99 SpoVG
AAA                  PF00004.24   132 sp|P27643|SP5K_BACSU -            322     1e-19   71.0   0.0   1   1   2.2e-22   2.2e-19   69.9   0.0     1   131    95   226    95   227 0.85 ATPase family associated with various cellular activities (AAA)
AAA_22               PF13401.1    131 sp|P27643|SP5K_BACSU -            322   6.9e-06   26.2   0.4   1   1   2.2e-06    0.0022   18.1   0.2     3   125    91   202    87   209 0.69 AAA domain
RuvB_N               PF05496.7    234 sp|P27643|SP5K_BACSU -            322   1.3e-05   24.4   0.8   1   1   3.1e-07    0.0003   19.9   0.2    47   200    89   249    35   259 0.56 Holliday junction DNA helicase ruvB N-terminus
AAA_17               PF13207.1    121 sp|P27643|SP5K_BACSU -            322   0.00014   22.6   0.5   1   1   3.3e-07   0.00033   21.4   0.1     6    80    99   166    96   247 0.71 AAA domain
Mg_chelatase         PF01078.16   207 sp|P27643|SP5K_BACSU -            322   0.00028   20.1   0.4   1   2     1e-05      0.01   15.0   0.2     7    49    78   119    75   137 0.83 Magnesium chelatase, subunit ChlI
Sigma54_activat      PF00158.21   168 sp|P27643|SP5K_BACSU -            322   0.00038   19.9   0.6   1   1   5.1e-06     0.005   16.3   0.4    12   105    82   167    77   175 0.77 Sigma-54 interaction domain
AAA_5                PF07728.9    139 sp|P27643|SP5K_BACSU -            322   0.00049   19.8   0.3   1   1   2.4e-06    0.0023   17.6   0.0     1    73    94   163    94   169 0.84 AAA domain (dynein-related subfamily)
DUF815               PF05673.8    250 sp|P27643|SP5K_BACSU -            322   0.00087   18.2   1.5   1   2   0.00023      0.22   10.3   0.4    18    92    46   135    28   165 0.63 Protein of unknown function (DUF815)
AAA_19               PF13245.1     76 sp|P27643|SP5K_BACSU -            322   0.00096   18.8   0.0   1   1   2.5e-06    0.0025   17.5   0.0    16    40    98   134    88   151 0.73 Part of AAA domain
ADK                  PF00406.17   151 sp|P27643|SP5K_BACSU -            322    0.0014   18.5   0.2   1   2   0.00014      0.14   12.0   0.0     3    37    99   134    97   153 0.79 Adenylate kinase
AAA_18               PF13238.1    129 sp|P27643|SP5K_BACSU -            322    0.0044   17.3   0.4   1   1   1.7e-05     0.017   15.4   0.0     4    23    98   125    96   197 0.76 AAA domain
Viral_helicase1      PF01443.13   234 sp|P27643|SP5K_BACSU -            322     0.019   14.4   0.0   1   1   3.5e-05     0.034   13.6   0.0     3    77    97   170    95   195 0.81 Viral (Superfamily 1) RNA helicase
Torsin               PF06309.6    127 sp|P27643|SP5K_BACSU -            322     0.027   14.3   0.0   1   1   6.3e-05     0.062   13.1   0.0    50    82    89   121    62   130 0.87 Torsin
Acyl_transf_2        PF02273.10   294 sp|P27643|SP5K_BACSU -            322     0.035   13.1   0.0   1   1   5.7e-05     0.056   12.4   0.0    19    50   181   212   173   225 0.89 Acyl transferase
AAA_2                PF07724.9    171 sp|P27643|SP5K_BACSU -            322      0.04   13.8   0.9   1   1   0.00015      0.15   11.9   0.0     4    82    93   169    90   190 0.78 AAA domain (Cdc48 subfamily)
OKR_DC_1             PF01276.15   417 sp|P21885|SPEA_BACSU -            490  6.4e-121  403.7   0.0   1   1  1.2e-123  2.2e-120  402.0   0.0     1   416     6   370     6   371 0.99 Orn/Lys/Arg decarboxylase, major domain
OKR_DC_1_C           PF03711.10   137 sp|P21885|SPEA_BACSU -            490   8.7e-15   54.9   0.1   1   1   9.2e-18   1.7e-14   54.0   0.1    22   103   380   456   370   465 0.88 Orn/Lys/Arg decarboxylase, C-terminal domain
Aminotran_1_2        PF00155.16   363 sp|P21885|SPEA_BACSU -            490   1.2e-10   40.9   0.7   1   1   3.5e-13   6.5e-10   38.4   0.2    54   303    75   310    62   313 0.77 Aminotransferase class I and II
DegT_DnrJ_EryC1      PF01041.12   363 sp|P21885|SPEA_BACSU -            490   4.9e-10   38.9   2.6   1   1   4.5e-13   8.4e-10   38.2   2.6    34   171    74   224    66   227 0.82 DegT/DnrJ/EryC1/StrS aminotransferase family
Aminotran_5          PF00266.14   371 sp|P21885|SPEA_BACSU -            490   6.1e-08   31.7   0.5   1   2   4.3e-09     8e-06   24.8   0.2    44   204    66   229    60   231 0.76 Aminotransferase class-V
Beta_elim_lyase      PF01212.16   290 sp|P21885|SPEA_BACSU -            490   2.4e-06   26.8   0.1   1   1   2.2e-09     4e-06   26.1   0.1    31   271    67   302    45   317 0.76 Beta-eliminating lyase
SLA_LP_auto_ag       PF05889.8    389 sp|P21885|SPEA_BACSU -            490   1.9e-05   23.3   0.0   1   1     2e-08   3.8e-05   22.3   0.0    78   203    85   206    72   228 0.76 Soluble liver antigen/liver pancreas antigen (SLA/LP autoantigen)
Ferritin             PF00210.19   142 sp|P21885|SPEA_BACSU -            490     0.097   12.4   0.0   1   2   0.00028      0.52   10.0   0.0     5   100   250   358   246   364 0.82 Ferritin-like domain
Arginase             PF00491.16   278 sp|P70999|SPEB_BACSU -            290   2.5e-77  259.9   0.0   1   1   3.8e-81   2.8e-77  259.7   0.0     1   277    22   286    22   287 0.93 Arginase family
UPF0489              PF12640.2    162 sp|P70999|SPEB_BACSU -            290     0.011   15.9   0.0   1   1     2e-06     0.015   15.4   0.0     8    42   112   144   108   218 0.81 UPF0489 domain
Spermine_synth       PF01564.12   246 sp|P70998|SPEE_BACSU -            276   7.8e-91  303.3   0.2   1   1   6.6e-94   9.8e-91  303.0   0.2     2   239     5   238     4   246 0.97 Spermine/spermidine synthase
Methyltransf_18      PF12847.2    112 sp|P70998|SPEE_BACSU -            276   0.00088   19.8   0.0   1   1   9.1e-07    0.0013   19.2   0.0     3   111    78   190    76   191 0.80 Methyltransferase domain
Methyltransf_31      PF13847.1    152 sp|P70998|SPEE_BACSU -            276    0.0012   18.4   0.0   1   1   1.3e-06    0.0019   17.7   0.0     6   122    79   204    76   247 0.76 Methyltransferase domain
Methyltransf_12      PF08242.7     99 sp|P70998|SPEE_BACSU -            276    0.0029   18.0   0.0   1   1   4.1e-06     0.006   17.0   0.0     1    72    81   155    81   186 0.65 Methyltransferase domain
Methyltransf_23      PF13489.1    161 sp|P70998|SPEE_BACSU -            276    0.0037   17.0   0.0   1   1   5.4e-06     0.008   15.9   0.0    14   121    70   195    57   220 0.78 Methyltransferase domain
DUF43                PF01861.11   243 sp|P70998|SPEE_BACSU -            276     0.042   12.8   0.0   1   1   4.6e-05     0.068   12.1   0.0    47   131    79   169    73   196 0.77 Protein of unknown function DUF43
Methyltransf_4       PF02390.12   197 sp|P70998|SPEE_BACSU -            276     0.076   12.0   0.0   1   1   0.00011      0.17   10.9   0.0   112   152   167   207   166   266 0.75 Putative methyltransferase
MTS                  PF05175.9    170 sp|P70998|SPEE_BACSU -            276     0.081   12.3   0.0   1   1   8.4e-05      0.12   11.6   0.0    31   142    76   190    65   211 0.74 Methyltransferase small domain
NTP_transf_3         PF12804.2    160 sp|P70998|SPEE_BACSU -            276     0.097   12.7   0.0   1   1    0.0001      0.15   12.0   0.0    74   110   170   206   130   237 0.85 MobA-like NTP transferase domain
Methyltransf_30      PF05430.6    124 sp|P70998|SPEE_BACSU -            276      0.13   11.9   0.0   1   1   0.00022      0.33   10.6   0.0    29    88   128   188   111   200 0.86 S-adenosyl-L-methionine-dependent methyltransferase
AdoMet_dc            PF02675.10   106 sp|O34426|SPEH_BACSU -            126   6.6e-36  122.4   0.0   1   1   5.1e-40   7.6e-36  122.2   0.0     1   106     7   112     7   112 0.98 S-adenosylmethionine decarboxylase
Radical_SAM          PF04055.16   166 sp|P37956|SPL_BACSU  -            342   2.3e-05   24.6   0.4   1   1     4e-09   5.9e-05   23.3   0.4     1   158    85   245    85   252 0.70 Radical SAM superfamily
Gate                 PF07670.9    109 sp|P35158|SPMB_BACSU -            178     5e-07   29.5   5.2   2   2   6.8e-11     5e-07   29.5   5.2     2   104    46   139    45   147 0.91 Nucleoside recognition
COX2_TM              PF02790.10    84 sp|P35158|SPMB_BACSU -            178     0.052   13.5   1.1   1   1     7e-06     0.052   13.5   1.1    30    80     8    60     4    63 0.81 Cytochrome C oxidase subunit II, transmembrane domain
Peptidase_S49        PF01343.13   154 sp|O34525|SPPA_BACSU -            335   2.4e-60  202.7   0.5   1   1   7.4e-64   3.6e-60  202.1   0.5     3   151   131   280   129   283 0.97 Peptidase family S49
CLP_protease         PF00574.18   182 sp|O34525|SPPA_BACSU -            335   9.6e-08   31.8   0.3   1   1   1.8e-10   8.7e-07   28.7   0.3    36   107    92   165    82   269 0.83 Clp protease
SDH_sah              PF01972.11   286 sp|O34525|SPPA_BACSU -            335     0.001   17.8   0.0   1   1   3.4e-07    0.0017   17.2   0.0    84   154    92   169    85   186 0.77 Serine dehydrogenase proteinase
SprT-like            PF10263.4    157 sp|P96628|SPRTL_BACSU -            150   9.6e-29  100.0   4.2   1   1   7.3e-32   1.1e-28   99.8   4.2     1   155     6   147     6   149 0.91 SprT-like family
Zn-ribbon_8          PF09723.5     42 sp|P96628|SPRTL_BACSU -            150   0.00084   19.2   3.3   1   1   1.1e-06    0.0017   18.2   3.3     3    42   113   150   113   150 0.93 Zinc ribbon domain
zf-C3HC4_3           PF13920.1     50 sp|P96628|SPRTL_BACSU -            150     0.022   14.4   1.3   1   1   2.6e-05     0.038   13.6   1.3    22    49   114   147   110   148 0.93 Zinc finger, C3HC4 type (RING finger)
Ribosomal_L37ae      PF01780.14    90 sp|P96628|SPRTL_BACSU -            150     0.094   12.5   4.6   1   1   8.3e-05      0.12   12.2   3.0    26    62   106   144    97   146 0.84 Ribosomal L37ae protein family
FlhC                 PF05280.6    176 sp|P96628|SPRTL_BACSU -            150      0.12   11.8   0.8   1   1   9.5e-05      0.14   11.6   0.8   128   161   109   142    51   147 0.86 Flagellar transcriptional activator (FlhC)
TFIIS_C              PF01096.13    39 sp|P96628|SPRTL_BACSU -            150      0.17   11.5   3.9   1   2   0.00012      0.18   11.4   0.2    20    38   107   125   105   126 0.89 Transcription factor S-II (TFIIS)
Zn_Tnp_IS1595        PF12760.2     46 sp|P96628|SPRTL_BACSU -            150      0.39   10.5   4.1   1   1   0.00053      0.79    9.5   4.1    19    44   116   142   109   144 0.76 Transposase zinc-ribbon domain
Glycos_transf_2      PF00535.21   169 sp|P39621|SPSA_BACSU -            256   2.7e-28   98.7   0.6   1   1   1.5e-31   5.5e-28   97.7   0.6     1   164     5   167     5   172 0.91 Glycosyl transferase family 2
Glyco_tranf_2_3      PF13641.1    228 sp|P39621|SPSA_BACSU -            256   3.2e-12   46.7   0.1   1   1   1.1e-15   4.2e-12   46.3   0.1     1   113     2   117     2   167 0.86 Glycosyltransferase like family 2
GNT-I                PF03071.10   434 sp|P39621|SPSA_BACSU -            256     0.019   13.5   0.1   1   1   9.4e-06     0.035   12.6   0.1    93   171     2    79     1    86 0.78 GNT-I family
Glyco_tranf_2_4      PF13704.1     97 sp|P39621|SPSA_BACSU -            256       0.1   12.9   0.1   1   2   6.3e-05      0.23   11.7   0.0     2    88    12   106    11   114 0.76 Glycosyl transferase family 2
DegT_DnrJ_EryC1      PF01041.12   363 sp|P39623|SPSC_BACSU -            389  1.6e-145  484.6   0.0   1   1  8.7e-149  1.9e-145  484.5   0.0     2   363    15   382    14   382 0.98 DegT/DnrJ/EryC1/StrS aminotransferase family
Aminotran_1_2        PF00155.16   363 sp|P39623|SPSC_BACSU -            389   2.5e-09   36.5   0.0   1   1   2.3e-12   4.9e-09   35.6   0.0    47   196    40   167    17   226 0.85 Aminotransferase class I and II
Cys_Met_Meta_PP      PF01053.15   386 sp|P39623|SPSC_BACSU -            389   7.7e-07   27.7   0.1   1   1   4.9e-10     1e-06   27.3   0.1    53   179    35   160    33   227 0.84 Cys/Met metabolism PLP-dependent enzyme
Beta_elim_lyase      PF01212.16   290 sp|P39623|SPSC_BACSU -            389   1.1e-06   28.0   0.0   1   1   6.2e-10   1.3e-06   27.7   0.0    28   221    36   213    25   357 0.77 Beta-eliminating lyase
Aminotran_5          PF00266.14   371 sp|P39623|SPSC_BACSU -            389   9.6e-06   24.5   0.4   1   1   8.8e-09   1.9e-05   23.6   0.4    44   181    38   164    34   294 0.82 Aminotransferase class-V
OKR_DC_1             PF01276.15   417 sp|P39623|SPSC_BACSU -            389     0.004   15.7   0.1   1   1   6.2e-06     0.013   14.0   0.1    63   215    33   170    16   180 0.76 Orn/Lys/Arg decarboxylase, major domain
SelA                 PF03841.8    367 sp|P39623|SPSC_BACSU -            389     0.041   12.6   0.0   1   2   0.00013      0.27    9.9   0.0    44    91    34    83    19    87 0.84 L-seryl-tRNA selenium transferase
CTP_transf_3         PF02348.14   217 sp|P39626|SPSF_BACSU -            240   7.1e-54  182.7   0.0   1   1   1.1e-57   8.5e-54  182.4   0.0     2   209     6   212     5   224 0.97 Cytidylyltransferase
NTP_transf_3         PF12804.2    160 sp|P39626|SPSF_BACSU -            240   0.00024   21.2   0.0   1   1   5.9e-08   0.00044   20.3   0.0    11   139    11   182    10   193 0.77 MobA-like NTP transferase domain
RmlD_sub_bind        PF04321.12   287 sp|P39631|SPSK_BACSU -            283    2e-101  338.6   0.0   1   1  1.7e-104  2.3e-101  338.4   0.0     2   284     3   277     1   280 0.98 RmlD substrate binding domain
Epimerase            PF01370.16   236 sp|P39631|SPSK_BACSU -            283   1.2e-23   83.8   0.0   1   1   1.5e-26     2e-23   83.0   0.0     1   227     4   202     4   210 0.90 NAD dependent epimerase/dehydratase family
Polysacc_synt_2      PF02719.10   294 sp|P39631|SPSK_BACSU -            283   2.8e-12   46.1   0.3   1   3   1.6e-05     0.021   13.7   0.1     1    29     4    32     4    35 0.87 Polysaccharide biosynthesis protein
Polysacc_synt_2      PF02719.10   294 sp|P39631|SPSK_BACSU -            283   2.8e-12   46.1   0.3   2   3   1.5e-09     2e-06   26.9   0.0    57   156    32   144    23   158 0.78 Polysaccharide biosynthesis protein
NAD_binding_4        PF07993.7    249 sp|P39631|SPSK_BACSU -            283   7.3e-08   31.6   0.2   2   2   1.9e-09   2.5e-06   26.5   0.0    88   204    53   158    46   188 0.73 Male sterility protein
NAD_binding_10       PF13460.1    183 sp|P39631|SPSK_BACSU -            283   2.1e-07   31.1   0.0   1   1   2.8e-09   3.8e-06   27.0   0.0     1   180     4   197     4   200 0.71 NADH(P)-binding
3Beta_HSD            PF01073.14   280 sp|P39631|SPSK_BACSU -            283   2.2e-07   29.9   0.0   1   2   0.00042      0.57    8.8   0.0     1    32     5    34     5    87 0.71 3-beta hydroxysteroid dehydrogenase/isomerase family
3Beta_HSD            PF01073.14   280 sp|P39631|SPSK_BACSU -            283   2.2e-07   29.9   0.0   2   2   3.2e-07   0.00043   19.0   0.0   126   226   102   195    93   233 0.83 3-beta hydroxysteroid dehydrogenase/isomerase family
NmrA                 PF05368.8    233 sp|P39631|SPSK_BACSU -            283   1.2e-05   24.6   0.0   1   1   1.9e-08   2.6e-05   23.6   0.0     1   197     4   202     4   227 0.84 NmrA-like family
adh_short            PF00106.20   167 sp|P39631|SPSK_BACSU -            283   8.2e-05   22.5   0.0   1   1     1e-07   0.00014   21.8   0.0     3    73     4    74     2    83 0.83 short chain dehydrogenase
KR                   PF08659.5    181 sp|P39631|SPSK_BACSU -            283    0.0023   17.6   0.0   1   1   2.9e-06    0.0039   16.8   0.0     3    70     4    70     2    81 0.77 KR domain
DapB_N               PF01113.15   124 sp|P39631|SPSK_BACSU -            283     0.027   14.3   0.0   1   2   0.00014      0.19   11.6   0.0     1    60     2    60     2    75 0.77 Dihydrodipicolinate reductase, N-terminus
ArsC                 PF03960.10   110 sp|O31602|SPX_BACSU  -            131   4.4e-40  136.1   0.1   1   1   2.1e-43   5.1e-40  135.9   0.1     1   110     5   113     5   113 0.99 ArsC family
Glutaredoxin         PF00462.19    60 sp|O31602|SPX_BACSU  -            131   5.3e-09   35.9   0.0   1   1   4.9e-12   1.2e-08   34.7   0.0     1    45     2    46     2    56 0.92 Glutaredoxin
GST_N_3              PF13417.1     75 sp|O31602|SPX_BACSU  -            131   8.9e-05   22.6   0.0   1   1   6.8e-08   0.00017   21.7   0.0     1    29     4    32     4    52 0.89 Glutathione S-transferase, N-terminal domain
DUF1223              PF06764.6    202 sp|O31602|SPX_BACSU  -            131     0.017   14.9   0.0   1   1     1e-05     0.026   14.3   0.0     2    23     2    23     1    39 0.90 Protein of unknown function (DUF1223)
DUF836               PF05768.9     81 sp|O31602|SPX_BACSU  -            131     0.019   15.2   0.0   1   1   9.9e-06     0.025   14.8   0.0     2    37     2    33     1   114 0.84 Glutaredoxin-like domain (DUF836)
Thioredoxin_2        PF13098.1    112 sp|O31602|SPX_BACSU  -            131      0.11   12.7   0.0   1   1   5.7e-05      0.14   12.3   0.0     9    81     2    70     1    96 0.79 Thioredoxin-like domain
Prenyltrans_2        PF13249.1    113 sp|Q796C3|SQHC_BACSU -            632   8.7e-36  122.7   1.9   1   5   1.2e-09   3.6e-06   27.3   0.0     3   103    18   120    16   122 0.79 Prenyltransferase-like
Prenyltrans_2        PF13249.1    113 sp|Q796C3|SQHC_BACSU -            632   8.7e-36  122.7   1.9   2   5   3.3e-05     0.098   13.0   0.0    20   107   260   347   245   356 0.83 Prenyltransferase-like
Prenyltrans_2        PF13249.1    113 sp|Q796C3|SQHC_BACSU -            632   8.7e-36  122.7   1.9   3   5   7.1e-08   0.00021   21.6   0.0    12   112   362   413   353   422 0.55 Prenyltransferase-like
Prenyltrans_2        PF13249.1    113 sp|Q796C3|SQHC_BACSU -            632   8.7e-36  122.7   1.9   4   5   1.1e-21   3.2e-18   66.1   0.2     2   112   400   531   399   532 0.86 Prenyltransferase-like
Prenyltrans_1        PF13243.1    109 sp|Q796C3|SQHC_BACSU -            632   6.9e-33  112.9   3.0   1   5   8.8e-09   2.6e-05   24.1   0.0     3   105    14   121    12   126 0.78 Prenyltransferase-like
Prenyltrans_1        PF13243.1    109 sp|Q796C3|SQHC_BACSU -            632   6.9e-33  112.9   3.0   4   5     1e-05     0.031   14.2   0.0    32    67   379   414   359   436 0.74 Prenyltransferase-like
Prenyltrans_1        PF13243.1    109 sp|Q796C3|SQHC_BACSU -            632   6.9e-33  112.9   3.0   5   5   1.7e-19     5e-16   58.6   2.2     1   104   465   580   465   587 0.83 Prenyltransferase-like
Prenyltrans          PF00432.16    44 sp|Q796C3|SQHC_BACSU -            632   4.1e-26   90.2  10.7   5   7   3.2e-05     0.095   12.2   0.0     4    21   396   413   396   416 0.90 Prenyltransferase and squalene oxidase repeat
Prenyltrans          PF00432.16    44 sp|Q796C3|SQHC_BACSU -            632   4.1e-26   90.2  10.7   6   7   8.5e-12   2.5e-08   33.3   2.7     2    44   464   505   463   505 0.98 Prenyltransferase and squalene oxidase repeat
Prenyltrans          PF00432.16    44 sp|Q796C3|SQHC_BACSU -            632   4.1e-26   90.2  10.7   7   7   6.2e-12   1.8e-08   33.7   0.0     3    40   513   560   512   561 0.95 Prenyltransferase and squalene oxidase repeat
A2M_comp             PF07678.9    246 sp|Q796C3|SQHC_BACSU -            632   2.2e-13   49.9   0.0   1   3   8.7e-07    0.0026   17.0   0.0    76   231   246   415   236   423 0.77 A-macroglobulin complement component
A2M_comp             PF07678.9    246 sp|Q796C3|SQHC_BACSU -            632   2.2e-13   49.9   0.0   2   3   0.00015      0.43    9.7   0.0    47    68   461   482   441   490 0.81 A-macroglobulin complement component
A2M_comp             PF07678.9    246 sp|Q796C3|SQHC_BACSU -            632   2.2e-13   49.9   0.0   3   3   2.9e-07   0.00086   18.6   0.0    50   129   512   585   498   595 0.84 A-macroglobulin complement component
Condensation         PF00668.15   301 sp|P27206|SRFAA_BACSU -           3587         0 1196.7  19.1   1   5   8.3e-79   1.4e-75  253.9   0.0     3   301     4   303     2   303 0.97 Condensation domain
Condensation         PF00668.15   301 sp|P27206|SRFAA_BACSU -           3587         0 1196.7  19.1   2   5   1.6e-96   2.7e-93  312.1   0.0     2   300  1059  1345  1058  1346 0.98 Condensation domain
Condensation         PF00668.15   301 sp|P27206|SRFAA_BACSU -           3587         0 1196.7  19.1   3   5  6.1e-100     1e-96  323.3   0.3     2   300  2098  2385  2097  2386 0.99 Condensation domain
Condensation         PF00668.15   301 sp|P27206|SRFAA_BACSU -           3587         0 1196.7  19.1   5   5     3e-97   4.9e-94  314.5   5.0     2   301  3122  3425  3121  3425 0.99 Condensation domain
AMP-binding          PF00501.23   417 sp|P27206|SRFAA_BACSU -           3587         0 1071.2   0.2   1   3  1.1e-112  1.8e-109  365.8   0.0     1   417   467   867   467   867 0.87 AMP-binding enzyme
AMP-binding          PF00501.23   417 sp|P27206|SRFAA_BACSU -           3587         0 1071.2   0.2   2   3  4.3e-110  7.1e-107  357.3   0.0     1   417  1511  1908  1511  1908 0.87 AMP-binding enzyme
AMP-binding          PF00501.23   417 sp|P27206|SRFAA_BACSU -           3587         0 1071.2   0.2   3   3    3e-106    5e-103  344.6   0.0     1   417  2551  2938  2551  2938 0.88 AMP-binding enzyme
HxxPF_rpt            PF13745.1     91 sp|P27206|SRFAA_BACSU -           3587   1.8e-70  233.3   4.6   1   3   1.7e-12   2.9e-09   37.1   0.0     2    89   325   411   324   413 0.93 HxxPF-repeated domain
HxxPF_rpt            PF13745.1     91 sp|P27206|SRFAA_BACSU -           3587   1.8e-70  233.3   4.6   2   3   1.3e-31   2.2e-28   98.3   0.1     1    91  1367  1457  1367  1457 0.99 HxxPF-repeated domain
HxxPF_rpt            PF13745.1     91 sp|P27206|SRFAA_BACSU -           3587   1.8e-70  233.3   4.6   3   3   3.6e-31     6e-28   97.0   0.1     2    91  2408  2497  2407  2497 0.99 HxxPF-repeated domain
AMP-binding_C        PF13193.1     73 sp|P27206|SRFAA_BACSU -           3587     6e-52  174.5   4.6   1   3     1e-18   1.7e-15   57.6   0.5     1    73   875   950   875   950 0.92 AMP-binding enzyme C-terminal domain
AMP-binding_C        PF13193.1     73 sp|P27206|SRFAA_BACSU -           3587     6e-52  174.5   4.6   2   3   8.1e-19   1.3e-15   58.0   0.0     1    73  1916  1989  1916  1989 0.91 AMP-binding enzyme C-terminal domain
AMP-binding_C        PF13193.1     73 sp|P27206|SRFAA_BACSU -           3587     6e-52  174.5   4.6   3   3   5.4e-19   8.9e-16   58.6   0.1     1    73  2946  3018  2946  3018 0.94 AMP-binding enzyme C-terminal domain
PP-binding           PF00550.20    67 sp|P27206|SRFAA_BACSU -           3587   1.5e-45  153.2   0.1   1   3   2.3e-15   3.7e-12   46.3   0.0     2    66   979  1041   978  1042 0.93 Phosphopantetheine attachment site
PP-binding           PF00550.20    67 sp|P27206|SRFAA_BACSU -           3587   1.5e-45  153.2   0.1   2   3   9.2e-16   1.5e-12   47.5   0.0     1    66  2017  2080  2017  2081 0.95 Phosphopantetheine attachment site
PP-binding           PF00550.20    67 sp|P27206|SRFAA_BACSU -           3587   1.5e-45  153.2   0.1   3   3   5.7e-18   9.4e-15   54.6   0.0     2    67  3046  3108  3045  3108 0.95 Phosphopantetheine attachment site
AATase               PF07247.7    480 sp|P27206|SRFAA_BACSU -           3587   3.4e-05   22.5   0.0   2   3     7e-05      0.11   10.9   0.0   106   166  2185  2243  2177  2259 0.88 Alcohol acetyltransferase
Condensation         PF00668.15   301 sp|Q04747|SRFAB_BACSU -           3583         0 1195.8  13.1   1   4     5e-91   9.3e-88  293.9   0.3     2   300     7   305     6   306 0.97 Condensation domain
Condensation         PF00668.15   301 sp|Q04747|SRFAB_BACSU -           3583         0 1195.8  13.1   2   4   3.4e-94   6.3e-91  304.3   0.1     2   300  1055  1339  1054  1340 0.99 Condensation domain
Condensation         PF00668.15   301 sp|Q04747|SRFAB_BACSU -           3583         0 1195.8  13.1   3   4  3.2e-100     6e-97  324.1   0.1     2   299  2094  2380  2093  2382 0.99 Condensation domain
Condensation         PF00668.15   301 sp|Q04747|SRFAB_BACSU -           3583         0 1195.8  13.1   4   4   5.3e-87   9.9e-84  280.7   0.5     2   300  3118  3420  3117  3421 0.98 Condensation domain
AMP-binding          PF00501.23   417 sp|Q04747|SRFAB_BACSU -           3583         0 1083.9   0.1   1   3  7.7e-112  1.4e-108  362.9   0.0     1   417   471   864   471   864 0.87 AMP-binding enzyme
AMP-binding          PF00501.23   417 sp|Q04747|SRFAB_BACSU -           3583         0 1083.9   0.1   2   3  2.7e-115    5e-112  374.3   0.0     1   417  1502  1904  1502  1904 0.88 AMP-binding enzyme
AMP-binding          PF00501.23   417 sp|Q04747|SRFAB_BACSU -           3583         0 1083.9   0.1   3   3  8.5e-106  1.6e-102  343.0   0.0     1   417  2547  2934  2547  2934 0.88 AMP-binding enzyme
HxxPF_rpt            PF13745.1     91 sp|Q04747|SRFAB_BACSU -           3583   1.6e-63  210.9   4.5   2   4   2.4e-31   4.4e-28   97.4   0.0     1    91  1361  1451  1361  1451 0.99 HxxPF-repeated domain
HxxPF_rpt            PF13745.1     91 sp|Q04747|SRFAB_BACSU -           3583   1.6e-63  210.9   4.5   3   4   6.1e-32   1.1e-28   99.3   0.1     1    91  2403  2493  2403  2493 0.99 HxxPF-repeated domain
AMP-binding_C        PF13193.1     73 sp|Q04747|SRFAB_BACSU -           3583   1.8e-47  160.1   1.2   1   3   1.6e-15     3e-12   47.3   0.0     1    73   872   945   872   945 0.93 AMP-binding enzyme C-terminal domain
AMP-binding_C        PF13193.1     73 sp|Q04747|SRFAB_BACSU -           3583   1.8e-47  160.1   1.2   2   3   1.2e-16   2.2e-13   50.9   0.0     1    73  1912  1984  1912  1984 0.94 AMP-binding enzyme C-terminal domain
AMP-binding_C        PF13193.1     73 sp|Q04747|SRFAB_BACSU -           3583   1.8e-47  160.1   1.2   3   3   7.7e-19   1.4e-15   57.9   0.1     1    73  2942  3014  2942  3014 0.94 AMP-binding enzyme C-terminal domain
PP-binding           PF00550.20    67 sp|Q04747|SRFAB_BACSU -           3583   6.2e-47  157.7   0.0   1   3   3.6e-15   6.7e-12   45.4   0.0     2    67   973  1035   972  1035 0.95 Phosphopantetheine attachment site
PP-binding           PF00550.20    67 sp|Q04747|SRFAB_BACSU -           3583   6.2e-47  157.7   0.0   2   3   2.3e-17   4.4e-14   52.5   0.0     2    67  2013  2076  2012  2076 0.95 Phosphopantetheine attachment site
PP-binding           PF00550.20    67 sp|Q04747|SRFAB_BACSU -           3583   6.2e-47  157.7   0.0   3   3   5.1e-18   9.4e-15   54.6   0.0     2    67  3042  3104  3041  3104 0.95 Phosphopantetheine attachment site
AMP-binding          PF00501.23   417 sp|Q08787|SRFAC_BACSU -           1275  6.5e-110  367.3   0.0   1   1  5.8e-113  9.6e-110  366.8   0.0     1   417   470   867   470   867 0.89 AMP-binding enzyme
Condensation         PF00668.15   301 sp|Q08787|SRFAC_BACSU -           1275   8.9e-92  307.1   0.3   1   1   8.1e-95   1.3e-91  306.5   0.3     1   300     9   308     9   309 0.99 Condensation domain
Thioesterase         PF00975.15   229 sp|Q08787|SRFAC_BACSU -           1275   3.1e-35  122.4   0.0   1   1   6.3e-38     1e-34  120.7   0.0     3   224  1061  1266  1059  1271 0.88 Thioesterase domain
AMP-binding_C        PF13193.1     73 sp|Q08787|SRFAC_BACSU -           1275   1.9e-16   60.7   0.1   1   1     4e-19   6.5e-16   59.0   0.0     1    73   875   948   875   948 0.92 AMP-binding enzyme C-terminal domain
PP-binding           PF00550.20    67 sp|Q08787|SRFAC_BACSU -           1275   3.2e-16   59.3   0.0   1   1   4.4e-19   7.2e-16   58.2   0.0     2    67   976  1039   975  1039 0.96 Phosphopantetheine attachment site
Abhydrolase_6        PF12697.2    228 sp|Q08787|SRFAC_BACSU -           1275   0.00018   21.5   0.0   1   1   4.3e-07   0.00072   19.5   0.0    38   109  1078  1173  1064  1257 0.64 Alpha/beta hydrolase family
HxxPF_rpt            PF13745.1     91 sp|Q08787|SRFAC_BACSU -           1275     0.027   14.7   0.1   1   1   6.3e-05       0.1   12.9   0.1    18    90   341   416   331   417 0.71 HxxPF-repeated domain
Abhydrolase_5        PF12695.2    145 sp|Q08787|SRFAC_BACSU -           1275     0.039   13.6   0.0   1   1   7.8e-05      0.13   12.0   0.0    41    96  1093  1151  1066  1232 0.72 Alpha/beta hydrolase family
Transketolase_C      PF02780.15   124 sp|Q08787|SRFAC_BACSU -           1275      0.14   12.0   0.0   1   1   0.00029      0.48   10.3   0.0     5    35  1107  1137  1104  1151 0.81 Transketolase, C-terminal domain
Thioesterase         PF00975.15   229 sp|Q08788|SRFAD_BACSU -            242   8.3e-53  179.9   0.0   1   1     7e-56   9.4e-53  179.7   0.0     2   226    15   231    14   234 0.94 Thioesterase domain
Abhydrolase_6        PF12697.2    228 sp|Q08788|SRFAD_BACSU -            242   1.7e-20   73.9   0.0   1   1   1.4e-23   1.9e-20   73.7   0.0     4   228    19   229    16   229 0.80 Alpha/beta hydrolase family
Abhydrolase_5        PF12695.2    145 sp|Q08788|SRFAD_BACSU -            242   5.7e-10   39.1   0.0   1   1     6e-13   8.1e-10   38.6   0.0     8   141    22   214    15   217 0.71 Alpha/beta hydrolase family
Abhydrolase_1        PF00561.15   230 sp|Q08788|SRFAD_BACSU -            242   2.3e-09   37.1   0.0   1   2   3.2e-07   0.00043   19.9   0.0    27    65    58    99    40   170 0.80 alpha/beta hydrolase fold
Abhydrolase_1        PF00561.15   230 sp|Q08788|SRFAD_BACSU -            242   2.3e-09   37.1   0.0   2   2   7.3e-06    0.0098   15.4   0.0   170   229   174   231   167   232 0.93 alpha/beta hydrolase fold
Esterase             PF00756.15   251 sp|Q08788|SRFAD_BACSU -            242    0.0019   17.6   0.0   1   1   2.7e-06    0.0036   16.7   0.0   100   151    62   116    51   219 0.85 Putative esterase
Abhydrolase_3        PF07859.8    211 sp|Q08788|SRFAD_BACSU -            242    0.0023   17.5   0.0   1   1   1.9e-06    0.0026   17.3   0.0    57   110    65   118    52   217 0.76 alpha/beta hydrolase fold
DUF3089              PF11288.3    208 sp|Q08788|SRFAD_BACSU -            242    0.0024   17.0   0.0   1   1   2.4e-06    0.0033   16.6   0.0    71   114    52    97    27   123 0.80 Protein of unknown function (DUF3089)
PGAP1                PF07819.8    225 sp|Q08788|SRFAD_BACSU -            242     0.012   15.1   0.0   1   1   1.5e-05      0.02   14.4   0.0    68   100    59    93    50   121 0.77 PGAP1-like protein
YqbF                 PF14553.1     43 sp|Q08788|SRFAD_BACSU -            242     0.029   14.0   0.0   1   1   6.4e-05     0.086   12.5   0.0    10    30   215   235   214   238 0.95 YqbF, hypothetical protein domain
LCAT                 PF02450.10   389 sp|Q08788|SRFAD_BACSU -            242     0.038   12.9   0.0   1   1   4.5e-05      0.06   12.3   0.0   108   145    66   128    53   143 0.69 Lecithin:cholesterol acyltransferase
Lipase_3             PF01764.20   141 sp|Q08788|SRFAD_BACSU -            242     0.047   13.3   0.0   1   1   6.9e-05     0.093   12.3   0.0    61   114    68   127    35   139 0.69 Lipase (class 3)
SRP54                PF00448.17   196 sp|P37105|SRP54_BACSU -            446   3.6e-80  268.0   0.1   1   1   1.1e-82   7.1e-80  267.0   0.1     1   196   101   297   101   297 0.99 SRP54-type protein, GTPase domain
SRP_SPB              PF02978.14   104 sp|P37105|SRP54_BACSU -            446   1.4e-36  124.9   4.5   1   1     2e-39   1.4e-36  124.9   4.5     1   104   328   427   328   427 0.97 Signal peptide binding domain
SRP54_N              PF02881.14    75 sp|P37105|SRP54_BACSU -            446   1.3e-18   66.8   2.6   1   1     2e-21   1.3e-18   66.8   2.6     2    75     7    83     6    83 0.97 SRP54-type protein, helical bundle domain
CbiA                 PF01656.18   195 sp|P37105|SRP54_BACSU -            446   1.7e-07   30.8   2.9   1   1   2.1e-09   1.4e-06   27.8   2.5     9   163   111   256   105   291 0.69 CobQ/CobB/MinD/ParA nucleotide binding domain
Zeta_toxin           PF06414.7    201 sp|P37105|SRP54_BACSU -            446   1.8e-06   27.2   0.2   1   1   9.2e-09   6.2e-06   25.4   0.1    11   103    96   194    88   211 0.79 Zeta toxin
AAA_17               PF13207.1    121 sp|P37105|SRP54_BACSU -            446   4.3e-05   24.3   0.2   1   1   2.6e-07   0.00017   22.3   0.0     1    76   103   199   103   257 0.72 AAA domain
AAA_33               PF13671.1    143 sp|P37105|SRP54_BACSU -            446   6.3e-05   22.8   0.0   1   1     4e-07   0.00027   20.8   0.0     1    37   103   145   103   228 0.57 AAA domain
AAA_22               PF13401.1    131 sp|P37105|SRP54_BACSU -            446   9.5e-05   22.5   0.3   1   1   5.2e-07   0.00035   20.7   0.0     5   117   102   218    98   233 0.78 AAA domain
AAA_31               PF13614.1    157 sp|P37105|SRP54_BACSU -            446   0.00019   21.4   0.4   2   2    0.0012      0.78    9.6   0.0   107   141   173   206   164   218 0.77 AAA domain
AAA_30               PF13604.1    196 sp|P37105|SRP54_BACSU -            446   0.00097   18.7   0.4   1   2   8.6e-05     0.058   12.9   0.1    17   115   100   208    91   228 0.64 AAA domain
MobB                 PF03205.9    140 sp|P37105|SRP54_BACSU -            446     0.002   17.8   0.2   1   1   1.4e-05    0.0092   15.6   0.0     2    31   103   132   102   144 0.85 Molybdopterin guanine dinucleotide synthesis protein B
6PF2K                PF01591.13   223 sp|P37105|SRP54_BACSU -            446    0.0024   16.9   0.0   1   1   7.8e-06    0.0053   15.8   0.0     9    40    97   128    90   191 0.85 6-phosphofructo-2-kinase
APS_kinase           PF01583.15   157 sp|P37105|SRP54_BACSU -            446    0.0048   16.5   0.4   1   2   0.00021      0.14   11.8   0.1     2    36   101   135   100   152 0.79 Adenylylsulphate kinase
cobW                 PF02492.14   178 sp|P37105|SRP54_BACSU -            446     0.006   16.0   2.6   1   1   2.4e-05     0.016   14.6   0.9     2   152   103   252   102   262 0.75 CobW/HypB/UreG, nucleotide-binding domain
Response_reg         PF00072.19   112 sp|P37105|SRP54_BACSU -            446     0.028   14.4   0.1   1   1   0.00016       0.1   12.5   0.1    25    78   166   224   147   254 0.73 Response regulator receiver domain
AAA_16               PF13191.1    185 sp|P37105|SRP54_BACSU -            446     0.035   14.0   0.0   1   1   0.00017      0.11   12.4   0.0    18   159    95   225    80   248 0.62 AAA ATPase domain
AAA_28               PF13521.1    163 sp|P37105|SRP54_BACSU -            446     0.043   13.7   0.0   1   1   0.00017      0.12   12.3   0.0     2    81   104   193   103   207 0.69 AAA domain
AAA_18               PF13238.1    129 sp|P37105|SRP54_BACSU -            446     0.058   13.7   0.9   1   1   0.00039      0.26   11.5   0.2     1    23   104   138   104   222 0.64 AAA domain
DUF2493              PF10686.4     71 sp|P37105|SRP54_BACSU -            446      0.09   12.3   0.0   1   1    0.0014      0.94    9.0   0.0     5    45   401   441   398   443 0.93 Protein of unknown function (DUF2493)
SASP                 PF00269.15    61 sp|P04831|SSPA_BACSU -             69   2.1e-21   75.5   0.1   1   1   1.7e-25   2.5e-21   75.3   0.1     1    60    10    64    10    65 0.94 Small, acid-soluble spore proteins, alpha/beta type
SASP                 PF00269.15    61 sp|P04832|SSPB_BACSU -             67   8.8e-22   76.7   0.0   1   1   6.9e-26     1e-21   76.5   0.0     1    60     8    62     8    63 0.93 Small, acid-soluble spore proteins, alpha/beta type
SASP                 PF00269.15    61 sp|P02958|SSPC_BACSU -             72   3.2e-19   68.5   0.2   1   1   2.7e-23   3.9e-19   68.2   0.2     1    60    13    67    13    68 0.93 Small, acid-soluble spore proteins, alpha/beta type
SASP                 PF00269.15    61 sp|P04833|SSPD_BACSU -             64   2.8e-21   75.1   0.2   1   1   2.1e-25   3.1e-21   74.9   0.2     1    60     5    59     5    60 0.94 Small, acid-soluble spore proteins, alpha/beta type
SASP_gamma           PF04259.9     84 sp|P07784|SSPE_BACSU -             84   6.5e-28   96.6  32.8   1   1   2.7e-31     8e-28   96.3  32.8     1    84     8    84     8    84 0.96 Small, acid-soluble spore protein, gamma-type
DUF3710              PF12502.3    181 sp|P07784|SSPE_BACSU -             84    0.0048   16.2   5.3   2   2   5.8e-05      0.17   11.1   1.5    77   110    39    72    34    82 0.77 Protein of unknown function (DUF3710)
Kazal_2              PF07648.10    42 sp|P07784|SSPE_BACSU -             84    0.0068   16.3   1.3   3   3   0.00015      0.45   10.4   0.2    11    40    54    83    50    84 0.90 Kazal-type serine protease inhibitor domain
Tox-ART-HYD1         PF15633.1     96 sp|P07784|SSPE_BACSU -             84     0.052   14.3   6.4   1   1   0.00014      0.43   11.4   5.3    13    74     7    71     2    79 0.65 HYD1 signature containing ADP-ribosyltransferase
SASP                 PF00269.15    61 sp|P37549|SSPF_BACSU -             61   1.8e-09   37.2   0.1   1   1   1.6e-13   2.3e-09   36.9   0.1    13    61    10    55     5    55 0.92 Small, acid-soluble spore proteins, alpha/beta type
SspH                 PF08141.7     58 sp|O31552|SSPH_BACSU -             59   6.1e-29   99.8   0.7   1   1   4.5e-33   6.6e-29   99.7   0.7     1    58     1    58     1    58 1.00 Small acid-soluble spore protein H family
SSPI                 PF14098.1     65 sp|P94537|SSPI_BACSU -             71   1.9e-32  110.9   0.6   1   1   1.4e-36   2.1e-32  110.8   0.6     1    65     3    67     3    67 0.98 Small, acid-soluble spore protein I
SspK                 PF08176.7     47 sp|Q7WY75|SSPK_BACSU -             50   9.4e-30  102.3   3.5   1   1   7.2e-34   1.1e-29  102.2   3.5     1    47     2    48     2    48 0.98 Small acid-soluble spore protein K family
SspN                 PF08177.6     46 sp|Q7WY69|SSPN_BACSU -             48   5.9e-27   93.1   8.0   1   1   4.3e-31   6.4e-27   93.0   8.0     1    46     1    47     1    47 0.99 Small acid-soluble spore protein N family
SspO                 PF08175.7     51 sp|P71031|SSPO_BACSU -             48   8.9e-27   93.1   5.8   1   1   6.5e-31   9.7e-27   93.0   5.8     1    51     2    48     2    48 0.99 Small acid-soluble spore protein O family
SspP                 PF08179.7     45 sp|P71032|SSPP_BACSU -             48   7.4e-25   86.8  15.4   1   1   5.8e-29   8.6e-25   86.6  15.4     1    44     1    44     1    45 0.98 Small acid-soluble spore protein P family
SmpB                 PF01668.13    68 sp|O32230|SSRP_BACSU -            156     2e-32  110.8   0.2   1   1   2.2e-36   3.2e-32  110.1   0.2     1    67     7    73     7    74 0.97 SmpB protein
NMT1                 PF09084.6    216 sp|P40400|SSUA_BACSU -            332   2.9e-25   89.1   0.0   1   1   2.5e-28   5.4e-25   88.2   0.0     4   216    41   254    38   254 0.87 NMT1/THI5 like
NMT1_2               PF13379.1    252 sp|P40400|SSUA_BACSU -            332     9e-23   80.9   0.0   1   1   5.6e-26   1.2e-22   80.5   0.0     5   249    30   256    26   261 0.87 NMT1-like family
OpuAC                PF04069.7    257 sp|P40400|SSUA_BACSU -            332   4.1e-11   42.7   0.1   1   1   3.3e-14     7e-11   41.9   0.1    22   242    55   260    31   275 0.80 Substrate binding domain of ABC-type glycine betaine transport system
SBP_bac_3            PF00497.15   225 sp|P40400|SSUA_BACSU -            332   7.5e-08   31.8   0.0   2   2   1.6e-10   3.3e-07   29.7   0.0    86   186   116   216    53   238 0.72 Bacterial extracellular solute-binding proteins, family 3
Phosphonate-bd       PF12974.2    243 sp|P40400|SSUA_BACSU -            332   4.3e-05   23.0   0.0   1   1   2.9e-08   6.1e-05   22.5   0.0    43   219    76   242    52   278 0.75 ABC transporter, phosphonate, periplasmic substrate-binding protein
HEM4                 PF02602.10   231 sp|P40400|SSUA_BACSU -            332     0.089   12.0   0.0   2   2   0.00014       0.3   10.3   0.0   114   172   132   186    98   189 0.92 Uroporphyrinogen-III synthase HemD
LPAM_1               PF08139.7     25 sp|P40400|SSUA_BACSU -            332      0.25   11.6   2.3   1   1   0.00028       0.6   10.4   2.3     1    23     1    18     1    18 0.94 Prokaryotic membrane lipoprotein lipid attachment site
ABC_tran             PF00005.22   137 sp|P97027|SSUB_BACSU -            255   5.9e-33  114.0   0.0   1   1   1.5e-35   8.5e-33  113.5   0.0     1   136    22   158    22   159 0.95 ABC transporter
AAA_21               PF13304.1    303 sp|P97027|SSUB_BACSU -            255     1e-11   45.3   0.2   1   2   3.5e-07   0.00019   21.5   0.3     3    25    36    68    34   118 0.67 AAA domain
AAA_21               PF13304.1    303 sp|P97027|SSUB_BACSU -            255     1e-11   45.3   0.2   2   2   1.5e-07   8.1e-05   22.7   0.0   220   298   114   190    75   193 0.78 AAA domain
AAA_15               PF13175.1    415 sp|P97027|SSUB_BACSU -            255   2.5e-05   23.5   0.0   1   2     0.001      0.57    9.1   0.2    23    43    28    56     5   117 0.78 AAA ATPase domain
AAA_15               PF13175.1    415 sp|P97027|SSUB_BACSU -            255   2.5e-05   23.5   0.0   2   2   8.5e-05     0.047   12.7   0.0   363   411   148   190    90   191 0.76 AAA ATPase domain
AAA_22               PF13401.1    131 sp|P97027|SSUB_BACSU -            255   2.8e-05   24.2   0.2   1   1   2.2e-07   0.00012   22.1   0.2     5   123    33   188    29   195 0.66 AAA domain
AAA                  PF00004.24   132 sp|P97027|SSUB_BACSU -            255     5e-05   23.5   0.1   1   1   1.3e-06    0.0007   19.7   0.1     2   111    36   190    35   195 0.63 ATPase family associated with various cellular activities (AAA)
AAA_10               PF12846.2    304 sp|P97027|SSUB_BACSU -            255   0.00035   20.1   0.1   1   2    0.0001     0.055   12.8   0.0     6    29    37    60    33    79 0.88 AAA-like domain
AAA_16               PF13191.1    185 sp|P97027|SSUB_BACSU -            255   0.00052   20.0   0.2   1   1   1.9e-06     0.001   19.0   0.2    20    72    28    78    19   207 0.59 AAA ATPase domain
DUF258               PF03193.11   161 sp|P97027|SSUB_BACSU -            255   0.00053   19.1   0.0   1   1   1.5e-06   0.00084   18.5   0.0    19    58    15    55     3    84 0.80 Protein of unknown function, DUF258
Rad17                PF03215.10   519 sp|P97027|SSUB_BACSU -            255   0.00084   18.1   0.0   1   1   2.3e-06    0.0013   17.5   0.0    35    67    22    54     7    80 0.74 Rad17 cell cycle checkpoint protein
AAA_17               PF13207.1    121 sp|P97027|SSUB_BACSU -            255   0.00091   20.0   0.2   1   1   1.4e-05    0.0076   17.0   0.2     4    35    37    75    35   251 0.71 AAA domain
AAA_29               PF13555.1     62 sp|P97027|SSUB_BACSU -            255    0.0027   17.1   0.1   1   1     1e-05    0.0057   16.1   0.1    17    40    27    49    20    54 0.81 P-loop containing region of AAA domain
AAA_33               PF13671.1    143 sp|P97027|SSUB_BACSU -            255    0.0063   16.3   0.0   1   1   0.00011     0.059   13.2   0.0     3   110    36   195    34   202 0.58 AAA domain
AAA_25               PF13481.1    194 sp|P97027|SSUB_BACSU -            255    0.0064   15.9   0.3   1   1   3.9e-05     0.021   14.2   0.0    30    53    29    52    17    61 0.87 AAA domain
Arch_ATPase          PF01637.13   234 sp|P97027|SSUB_BACSU -            255    0.0072   16.0   0.2   1   1   4.3e-05     0.023   14.3   0.2    14    50    28    60    19   206 0.74 Archaeal ATPase
NACHT                PF05729.7    166 sp|P97027|SSUB_BACSU -            255     0.011   15.3   0.1   1   2   0.00029      0.16   11.6   0.0     3    21    35    53    33    60 0.88 NACHT domain
Mg_chelatase         PF01078.16   207 sp|P97027|SSUB_BACSU -            255     0.013   14.6   0.0   1   1     7e-05     0.039   13.1   0.0    13    48    23    58    14    81 0.83 Magnesium chelatase, subunit ChlI
PduV-EutP            PF10662.4    143 sp|P97027|SSUB_BACSU -            255     0.013   14.9   0.0   1   1   4.4e-05     0.024   14.1   0.0     5    40    36    69    33    85 0.81 Ethanolamine utilisation - propanediol utilisation
ABC_ATPase           PF09818.4    448 sp|P97027|SSUB_BACSU -            255     0.026   13.1   0.0   2   2   0.00078      0.43    9.1   0.0   322   366   130   174   119   194 0.79 Predicted ATPase of the ABC class
AAA_5                PF07728.9    139 sp|P97027|SSUB_BACSU -            255     0.035   13.8   0.1   1   1   0.00029      0.16   11.7   0.0     3    21    36    54    34    81 0.88 AAA domain (dynein-related subfamily)
AAA_14               PF13173.1    128 sp|P97027|SSUB_BACSU -            255     0.035   14.0   0.0   1   1   0.00034      0.19   11.6   0.0     3    23    33    53    31    73 0.82 AAA domain
AAA_18               PF13238.1    129 sp|P97027|SSUB_BACSU -            255     0.043   14.1   0.1   1   1   0.00013     0.069   13.4   0.1     2    32    36    83    35   174 0.69 AAA domain
AAA_28               PF13521.1    163 sp|P97027|SSUB_BACSU -            255     0.058   13.3   0.0   1   1   0.00046      0.25   11.2   0.0     4    22    37    55    34   106 0.76 AAA domain
NB-ARC               PF00931.17   287 sp|P97027|SSUB_BACSU -            255     0.092   11.5   0.1   1   1   0.00025      0.14   11.0   0.1    19    40    32    53    14   189 0.88 NB-ARC domain
AAA_19               PF13245.1     76 sp|P97027|SSUB_BACSU -            255     0.097   12.4   0.1   1   1   0.00059      0.32   10.7   0.0    12    34    34    55    24    70 0.82 Part of AAA domain
SbcCD_C              PF13558.1     90 sp|P97027|SSUB_BACSU -            255      0.12   12.2   0.1   1   1   0.00045      0.25   11.2   0.1    55    87   140   172   119   175 0.73 Putative exonuclease SbcCD, C subunit
RNA_helicase         PF00910.17   107 sp|P97027|SSUB_BACSU -            255      0.16   12.1   0.0   1   1   0.00055       0.3   11.2   0.0     2    19    36    53    35    73 0.86 RNA helicase
BPD_transp_1         PF00528.17   185 sp|P40401|SSUC_BACSU -            276     3e-31  108.3   7.1   2   2     2e-35     3e-31  108.3   7.1     1   184    98   268    98   269 0.99 Binding-protein-dependent transport system inner membrane component
Bac_luciferase       PF00296.15   307 sp|P40402|SSUD_BACSU -            376   8.7e-85  284.5   1.7   1   1   1.3e-88     1e-84  284.3   1.7     1   306     1   323     1   324 0.96 Luciferase-like monooxygenase
TMEM171              PF15471.1    319 sp|P40402|SSUD_BACSU -            376      0.19   10.4   0.0   1   1   3.6e-05      0.27    9.9   0.0   201   252   144   200   140   240 0.77 Transmembrane protein family 171
AA_permease_2        PF13520.1    426 sp|O34739|STET_BACSU -            438   4.5e-62  209.9  47.3   1   1   1.1e-65   5.4e-62  209.7  47.3     1   396    12   403    12   422 0.88 Amino acid permease
AA_permease          PF00324.16   478 sp|O34739|STET_BACSU -            438   7.6e-44  149.8  41.7   1   1   2.1e-47     1e-43  149.4  41.7     4   423    19   402    17   434 0.90 Amino acid permease
AA_permease_C        PF13906.1     51 sp|O34739|STET_BACSU -            438   1.3e-05   24.9   0.7   3   3   2.6e-09   1.3e-05   24.9   0.7     1    49   384   435   384   437 0.93 C-terminus of AA_permease
AhpC-TSA             PF00578.16   124 sp|O31687|STOA_BACSU -            165   1.1e-20   73.6   0.1   1   1   8.3e-24   1.4e-20   73.2   0.1    11   123    40   148    30   149 0.88 AhpC/TSA family
Redoxin              PF08534.5    146 sp|O31687|STOA_BACSU -            165   2.8e-20   72.3   0.0   1   1   2.1e-23   3.4e-20   72.0   0.0    17   137    43   157    27   164 0.88 Redoxin
Thioredoxin_8        PF13905.1     95 sp|O31687|STOA_BACSU -            165     1e-17   63.9   0.1   1   1   9.6e-21   1.6e-17   63.4   0.1     3    95    55   146    53   146 0.87 Thioredoxin-like
Thioredoxin_2        PF13098.1    112 sp|O31687|STOA_BACSU -            165   9.1e-12   45.1   0.1   1   1   8.8e-15   1.5e-11   44.5   0.1     3   111    51   162    49   163 0.78 Thioredoxin-like domain
Thioredoxin          PF00085.15   104 sp|O31687|STOA_BACSU -            165   1.2e-10   41.0   0.3   1   2   7.2e-10   1.2e-06   28.1   0.1    16    63    51    99    43   110 0.78 Thioredoxin
Thioredoxin          PF00085.15   104 sp|O31687|STOA_BACSU -            165   1.2e-10   41.0   0.3   2   2   0.00012       0.2   11.3   0.0    59   101   120   163   104   165 0.83 Thioredoxin
Thioredoxin_9        PF14595.1    129 sp|O31687|STOA_BACSU -            165   9.4e-05   21.9   0.4   1   1   7.1e-07    0.0012   18.4   0.4    42   107    54   124    27   165 0.82 Thioredoxin
YtfJ_HI0045          PF09695.5    160 sp|O31687|STOA_BACSU -            165     0.022   14.1   0.1   1   1   1.7e-05     0.029   13.7   0.1    74   152    91   161    75   164 0.81 Bacterial protein of unknown function (YtfJ_HI0045)
DUF3978              PF13123.1    145 sp|O31687|STOA_BACSU -            165     0.047   13.0   0.1   1   1   4.3e-05     0.071   12.5   0.1    51   117    86   149    81   157 0.92 Protein of unknown function (DUF3978)
DUF953               PF06110.6    119 sp|O31687|STOA_BACSU -            165     0.051   13.0   0.1   1   1   5.3e-05     0.088   12.2   0.1    34    85    61   113    23   151 0.82 Eukaryotic protein of unknown function (DUF953)
Sua5_yciO_yrdC       PF01300.13   179 sp|P39153|SUA5_BACSU -            346   2.7e-61  205.9   0.0   1   1   8.9e-65   4.4e-61  205.2   0.0     2   179    27   203    26   203 0.99 Telomere recombination
SUA5                 PF03481.8    125 sp|P39153|SUA5_BACSU -            346   6.3e-36  123.2   0.0   1   1   2.2e-39   1.1e-35  122.4   0.0     1   125   205   341   205   341 0.86 Putative GTP-binding controlling metal-binding
HATPase_c            PF02518.21   111 sp|P39153|SUA5_BACSU -            346      0.13   12.0   0.0   1   1   6.9e-05      0.34   10.6   0.0    67    92   319   344   297   346 0.80 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
Peptidase_S8         PF00082.17   282 sp|P16396|SUBE_BACSU -            645     2e-57  194.5  10.2   1   1   1.4e-60   4.1e-57  193.4  10.2     1   279   137   380   137   383 0.94 Subtilase family
Inhibitor_I9         PF05922.11    82 sp|P16396|SUBE_BACSU -            645     9e-06   26.1   0.5   1   1     3e-09     9e-06   26.1   0.5    34    80    46    93    24    95 0.78 Peptidase inhibitor I9
efb-c                PF12199.3     65 sp|P16396|SUBE_BACSU -            645     0.094   12.5  42.3   4   5   4.5e-05      0.13   12.0   7.6     8    61   536   587   525   590 0.87 Extracellular fibrinogen binding protein C terminal
FUSC                 PF04632.7    650 sp|P16396|SUBE_BACSU -            645      0.77    8.1   7.8   1   2   3.4e-05       0.1   11.0   0.3   481   644   331   488   305   494 0.78 Fusaric acid resistance protein family
Peptidase_S8         PF00082.17   282 sp|P16397|SUBF_BACSU -           1433   1.9e-54  184.7   2.1   1   2     1e-57   1.9e-54  184.7   2.1     1   281   222   512   222   513 0.87 Subtilase family
CarboxypepD_reg      PF13620.1     82 sp|P16397|SUBF_BACSU -           1433   4.9e-23   80.9  19.3   1   4   5.4e-12     1e-08   35.1   1.2    17    82   844   904   840   904 0.93 Carboxypeptidase regulatory-like domain
CarboxypepD_reg      PF13620.1     82 sp|P16397|SUBF_BACSU -           1433   4.9e-23   80.9  19.3   2   4   3.3e-15   6.1e-12   45.4   0.9     1    72   910   978   910   986 0.90 Carboxypeptidase regulatory-like domain
DUF4480              PF13715.1     88 sp|P16397|SUBF_BACSU -           1433     3e-20   72.0  13.9   1   3   7.6e-11   1.4e-07   31.4   0.9    17    78   843   905   828   908 0.92 Domain of unknown function (DUF4480)
DUF4480              PF13715.1     88 sp|P16397|SUBF_BACSU -           1433     3e-20   72.0  13.9   2   3   1.3e-15   2.4e-12   46.7   0.1     1    68   910   979   910   987 0.92 Domain of unknown function (DUF4480)
Peptidase_M6         PF05547.6    646 sp|P16397|SUBF_BACSU -           1433   2.3e-11   42.5   0.4   1   2   1.2e-14   2.3e-11   42.5   0.4   361   460   698   788   665   803 0.79 Immune inhibitor A peptidase M6
Inhibitor_I9         PF05922.11    82 sp|P16397|SUBF_BACSU -           1433   8.5e-09   35.8   5.0   1   1   4.6e-12   8.5e-09   35.8   5.0     2    81    69   177    68   178 0.69 Peptidase inhibitor I9
Big_3_4              PF13754.1     54 sp|P16397|SUBF_BACSU -           1433   3.7e-05   23.9   0.1   3   5   0.00044      0.82   10.0   2.5     6    54  1197  1244  1193  1244 0.88 Bacterial Ig-like domain (group 3)
Big_3_4              PF13754.1     54 sp|P16397|SUBF_BACSU -           1433   3.7e-05   23.9   0.1   4   5     2e-08   3.7e-05   23.9   0.1     7    49  1283  1323  1276  1328 0.86 Bacterial Ig-like domain (group 3)
PEGA                 PF08308.6     71 sp|P16397|SUBF_BACSU -           1433   7.1e-05   22.5   1.7   1   2   9.6e-06     0.018   14.8   0.2    28    69   865   905   857   907 0.91 PEGA domain
phage_tail_N         PF08400.5    134 sp|P16397|SUBF_BACSU -           1433   9.4e-05   22.1   8.4   1   2   2.2e-05     0.041   13.5   1.1    29   105   844   918   829   922 0.84 Prophage tail fibre N-terminal
phage_tail_N         PF08400.5    134 sp|P16397|SUBF_BACSU -           1433   9.4e-05   22.1   8.4   2   2   9.6e-05      0.18   11.5   0.5    37    71   936   970   915   993 0.77 Prophage tail fibre N-terminal
Peptidase_S8         PF00082.17   282 sp|P04189|SUBT_BACSU -            381   2.4e-67  227.0  16.1   1   1   4.6e-71   3.4e-67  226.5  16.1     1   280   133   379   133   381 0.95 Subtilase family
Inhibitor_I9         PF05922.11    82 sp|P04189|SUBT_BACSU -            381   7.5e-12   45.6   2.1   1   1   2.6e-15   1.9e-11   44.3   2.1     1    79    38   103    38   105 0.89 Peptidase inhibitor I9
Peptidase_S8         PF00082.17   282 sp|P29141|SUBV_BACSU -            806   1.8e-92  309.4   9.0   1   2     6e-96   1.8e-92  309.4   9.0     1   281   184   594   184   595 0.95 Subtilase family
PA                   PF02225.17   101 sp|P29141|SUBV_BACSU -            806   2.5e-15   55.9   0.4   1   1   3.6e-18   1.1e-14   53.9   0.4     8   100   382   464   376   465 0.91 PA domain
Inhibitor_I9         PF05922.11    82 sp|P29141|SUBV_BACSU -            806     2e-09   37.8   3.1   1   2   1.7e-12   5.1e-09   36.5   0.8     2    81    58   142    57   143 0.78 Peptidase inhibitor I9
FlgD_ig              PF13860.1     81 sp|P29141|SUBV_BACSU -            806   3.1e-08   33.2   1.2   2   2   2.9e-10   8.5e-07   28.6   0.4    12    80   722   791   711   792 0.84 FlgD Ig-like domain
FixG_C               PF11614.3    118 sp|P29141|SUBV_BACSU -            806       0.4   10.7   5.1   1   1   3.2e-05     0.094   12.8   0.3    36   104   622   689   615   702 0.82 IG-like fold at C-terminal of FixG, putative oxidoreductase
ATP-grasp_2          PF08442.5    202 sp|P80886|SUCC_BACSU -            385   6.2e-84  280.3   3.8   1   1   3.5e-87     1e-83  279.6   3.8     1   202     2   203     2   203 0.99 ATP-grasp domain
Ligase_CoA           PF00549.14   153 sp|P80886|SUCC_BACSU -            385   4.8e-26   91.1   1.6   1   1   1.6e-29   4.8e-26   91.1   1.6     1   152   262   381   262   382 0.97 CoA-ligase
ATP-grasp_5          PF13549.1    222 sp|P80886|SUCC_BACSU -            385   1.1e-10   41.1   3.6   1   1   8.7e-13   2.6e-09   36.6   3.6    11   221     4   217     2   218 0.79 ATP-grasp domain
GARS_A               PF01071.14   194 sp|P80886|SUCC_BACSU -            385   0.00024   20.7   0.2   1   1   1.8e-07   0.00054   19.5   0.2     7    75     9    81     5   127 0.81 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain
ATP-grasp_4          PF13535.1    184 sp|P80886|SUCC_BACSU -            385    0.0099   15.6   0.1   1   1   5.5e-06     0.016   14.9   0.1     9   122     9   138     6   166 0.75 ATP-grasp domain
CoA_binding          PF02629.14    96 sp|P80865|SUCD_BACSU -            300   7.9e-31  106.4   8.1   1   2   8.5e-34   3.1e-30  104.5   1.8     1    96     6    99     6    99 0.98 CoA binding domain
Ligase_CoA           PF00549.14   153 sp|P80865|SUCD_BACSU -            300   4.1e-19   68.6   0.7   1   1   1.9e-22   7.2e-19   67.8   0.7     1   149   151   268   151   271 0.94 CoA-ligase
Succ_CoA_lig         PF13607.1    138 sp|P80865|SUCD_BACSU -            300   2.3e-09   36.9   0.0   1   1   9.9e-13   3.7e-09   36.3   0.0     1    97   145   243   145   276 0.87 Succinyl-CoA ligase like flavodoxin domain
CoA_binding_2        PF13380.1    116 sp|P80865|SUCD_BACSU -            300   1.1e-05   25.5   0.6   1   2   1.8e-07   0.00067   19.8   0.0    21   115    26   129    15   130 0.87 CoA binding domain
Fe-S_biosyn          PF01521.15   112 sp|O32113|SUFA_BACSU -            120   4.5e-22   78.1   0.0   1   1   6.8e-26     5e-22   77.9   0.0     3   111     5   105     3   106 0.98 Iron-sulphur cluster biosynthesis
Glyco_hydro_65N      PF03636.10   255 sp|O32113|SUFA_BACSU -            120      0.14   11.4   0.0   1   1   2.2e-05      0.16   11.2   0.0    57   100    42    85    17    87 0.91 Glycosyl hydrolase family 65, N-terminal domain
UPF0051              PF01458.12   230 sp|O32162|SUFB_BACSU -            465     1e-69  234.4   0.6   1   1   9.6e-74   1.4e-69  234.0   0.6     2   230   207   436   206   436 0.99 Uncharacterized protein family (UPF0051)
ABC_tran             PF00005.22   137 sp|P80866|SUFC_BACSU -            261   1.4e-21   77.2   0.0   1   1   2.1e-24     2e-21   76.7   0.0     1   134    21   173    21   176 0.79 ABC transporter
SMC_N                PF02463.14   220 sp|P80866|SUFC_BACSU -            261   1.4e-08   34.2   1.6   1   1   1.3e-10   1.2e-07   31.1   1.6    25   213    32   222    12   228 0.66 RecF/RecN/SMC N terminal domain
AAA_21               PF13304.1    303 sp|P80866|SUFC_BACSU -            261   1.6e-05   24.9   0.0   1   2   0.00012      0.11   12.4   0.0     1    19    33    51    33    80 0.85 AAA domain
AAA_21               PF13304.1    303 sp|P80866|SUFC_BACSU -            261   1.6e-05   24.9   0.0   2   2   0.00033      0.31   10.9   0.0   229   302   140   210    88   211 0.64 AAA domain
AAA                  PF00004.24   132 sp|P80866|SUFC_BACSU -            261   0.00054   20.1   0.8   1   1   2.3e-05     0.021   14.9   0.8     3    71    36   178    35   213 0.69 ATPase family associated with various cellular activities (AAA)
AAA_29               PF13555.1     62 sp|P80866|SUFC_BACSU -            261    0.0011   18.4   0.1   1   1   2.1e-06     0.002   17.6   0.1    17    44    26    52    19    53 0.81 P-loop containing region of AAA domain
AAA_22               PF13401.1    131 sp|P80866|SUFC_BACSU -            261     0.005   16.9   0.6   1   1   5.9e-05     0.055   13.6   0.6     5   125    32   206    28   213 0.57 AAA domain
AAA_25               PF13481.1    194 sp|P80866|SUFC_BACSU -            261    0.0053   16.1   0.1   1   1   9.5e-06    0.0088   15.4   0.1    32    65    30    73    19   175 0.85 AAA domain
AAA_13               PF13166.1    712 sp|P80866|SUFC_BACSU -            261    0.0057   15.1   0.0   1   1   8.5e-06    0.0079   14.7   0.0    21    76    36   108    25   133 0.68 AAA domain
AAA_17               PF13207.1    121 sp|P80866|SUFC_BACSU -            261    0.0081   16.9   0.1   1   1   2.1e-05      0.02   15.7   0.1     3    64    35   110    34   199 0.72 AAA domain
AAA_23               PF13476.1    202 sp|P80866|SUFC_BACSU -            261     0.011   16.0   0.6   1   1   2.4e-05     0.022   15.0   0.1     4    40    15    52    12    54 0.77 AAA domain
DUF258               PF03193.11   161 sp|P80866|SUFC_BACSU -            261     0.012   14.7   0.1   1   1   2.3e-05     0.021   14.0   0.1    15    65    10    61     2    71 0.81 Protein of unknown function, DUF258
AAA_33               PF13671.1    143 sp|P80866|SUFC_BACSU -            261     0.013   15.4   0.0   1   1     2e-05     0.019   14.8   0.0     3    30    35    62    33   133 0.82 AAA domain
AAA_28               PF13521.1    163 sp|P80866|SUFC_BACSU -            261     0.059   13.3   0.2   1   1   0.00058      0.53   10.2   0.0     3    27    35    60    33    82 0.85 AAA domain
Glyco_trans_4_2      PF13477.1    139 sp|P80866|SUFC_BACSU -            261       0.1   12.4   0.0   1   1    0.0002      0.19   11.5   0.0    51    81   191   221   163   238 0.76 Glycosyl transferase 4-like
UPF0051              PF01458.12   230 sp|O32165|SUFD_BACSU -            437   1.9e-62  210.7   0.5   1   1   3.9e-66   2.9e-62  210.1   0.5     3   230   182   411   180   411 0.98 Uncharacterized protein family (UPF0051)
DUF2529              PF10740.4    172 sp|O32165|SUFD_BACSU -            437    0.0071   15.7   0.1   1   1   2.7e-06      0.02   14.3   0.1    58   126    64   131    52   141 0.89 Protein of unknown function (DUF2529)
Aminotran_5          PF00266.14   371 sp|O32164|SUFS_BACSU -            406  2.5e-163  543.1   0.1   1   1  1.3e-166  2.8e-163  542.9   0.1     1   371    23   391    23   391 1.00 Aminotransferase class-V
Aminotran_1_2        PF00155.16   363 sp|O32164|SUFS_BACSU -            406   1.8e-11   43.6   0.1   1   2   1.7e-13   3.6e-10   39.3   0.1    18   238    32   239    23   251 0.74 Aminotransferase class I and II
DegT_DnrJ_EryC1      PF01041.12   363 sp|O32164|SUFS_BACSU -            406   7.6e-10   38.3   1.1   1   2   6.6e-13   1.4e-09   37.4   0.5    49   151    93   203    47   207 0.87 DegT/DnrJ/EryC1/StrS aminotransferase family
Beta_elim_lyase      PF01212.16   290 sp|O32164|SUFS_BACSU -            406   2.6e-08   33.3   0.2   1   1   2.2e-11   4.6e-08   32.5   0.2    31   214    67   243    47   334 0.76 Beta-eliminating lyase
Cys_Met_Meta_PP      PF01053.15   386 sp|O32164|SUFS_BACSU -            406     7e-08   31.1   1.9   2   2   1.2e-10   2.5e-07   29.3   1.0    76   199    94   221    81   231 0.85 Cys/Met metabolism PLP-dependent enzyme
Pyridoxal_deC        PF00282.14   373 sp|O32164|SUFS_BACSU -            406     0.042   12.2   0.2   1   1   3.3e-05      0.07   11.5   0.2   152   234   126   202    78   238 0.79 Pyridoxal-dependent decarboxylase conserved domain
CIDE-N               PF02017.10    78 sp|O32164|SUFS_BACSU -            406      0.05   13.3   0.1   2   2   0.00017      0.37   10.6   0.0    41    71   140   169   130   173 0.85 CIDE-N domain
NifU_N               PF01592.11   127 sp|O32163|SUFU_BACSU -            147   4.5e-39  133.2   0.3   1   1     5e-43   7.4e-39  132.5   0.2     2   126    11   128    10   129 0.97 NifU-like N terminal domain
Inositol_P           PF00459.20   271 sp|Q45499|SUHB_BACSU -            265   3.2e-68  229.9   0.0   1   1   2.4e-72   3.6e-68  229.8   0.0     2   263     4   257     3   265 0.90 Inositol monophosphatase family
PHO4                 PF01384.15   326 sp|O34734|SULP_BACSU -            354   1.4e-55  188.2  32.7   1   2   9.6e-60   1.4e-55  188.2  32.7     1   326    16   305    16   305 0.92 Phosphate transporter family
TP_methylase         PF00590.15   210 sp|O34744|SUMT_BACSU -            257   2.9e-48  164.3   0.0   1   1   9.1e-52   3.4e-48  164.1   0.0     1   209     3   214     3   215 0.88 Tetrapyrrole (Corrin/Porphyrin) Methylases
Epimerase_2          PF02350.14   346 sp|O34744|SUMT_BACSU -            257     0.038   12.7   0.1   1   1   2.4e-05     0.091   11.5   0.1    83   158   119   239   116   256 0.87 UDP-N-acetylglucosamine 2-epimerase
Toxin_64             PF15542.1    104 sp|O34744|SUMT_BACSU -            257     0.063   13.8   0.0   1   1   5.4e-05       0.2   12.2   0.0    14    59    43    87    38    90 0.90 Putative toxin 64
NKWYS                PF10364.4    141 sp|O34744|SUMT_BACSU -            257     0.084   12.6   0.5   2   2   5.6e-05      0.21   11.3   0.0    22    43   229   250   212   253 0.83 Putative capsular polysaccharide synthesis protein
Glycos_transf_2      PF00535.21   169 sp|O31986|SUNS_BACSU -            422   7.2e-20   71.3   0.8   1   1   3.6e-23   1.3e-19   70.4   0.8     4   131    60   180    57   258 0.77 Glycosyl transferase family 2
Glyco_tranf_2_2      PF10111.4    281 sp|O31986|SUNS_BACSU -            422     2e-08   33.7   2.4   1   2   5.3e-12     2e-08   33.7   2.4    17   114    67   154    60   209 0.77 Glycosyltransferase like family 2
Glyco_tranf_2_4      PF13704.1     97 sp|O31986|SUNS_BACSU -            422   1.5e-07   31.6   0.2   1   1   1.5e-10   5.5e-07   29.8   0.3     1    88    63   145    63   153 0.83 Glycosyl transferase family 2
Glyco_tranf_2_3      PF13641.1    228 sp|O31986|SUNS_BACSU -            422   0.00023   21.0   0.0   1   1     1e-07   0.00039   20.3   0.0     1   102    54   144    54   178 0.83 Glycosyltransferase like family 2
Peptidase_C39        PF03412.10   131 sp|P68579|SUNT_BACSU -            705   1.7e-32  111.9   0.2   1   1   6.6e-35   3.4e-32  111.0   0.2     2   129     7   141     6   143 0.96 Peptidase C39 family
ABC_membrane         PF00664.18   275 sp|P68579|SUNT_BACSU -            705   1.2e-28  100.3  25.4   1   1   3.4e-31   1.7e-28   99.7  25.4     1   275   168   438   168   438 0.96 ABC transporter transmembrane region
ABC_tran             PF00005.22   137 sp|P68579|SUNT_BACSU -            705   2.2e-26   92.7   0.0   1   1   8.9e-29   4.6e-26   91.7   0.0     2   135   500   645   499   647 0.89 ABC transporter
AAA_17               PF13207.1    121 sp|P68579|SUNT_BACSU -            705   1.1e-05   26.1   0.1   1   1   8.2e-08   4.2e-05   24.3   0.0     1    40   511   546   511   651 0.68 AAA domain
Sigma54_activat      PF00158.21   168 sp|P68579|SUNT_BACSU -            705   6.8e-05   22.4   0.0   1   1   3.1e-07   0.00016   21.1   0.0     7    49   494   536   489   549 0.84 Sigma-54 interaction domain
Sigma54_activ_2      PF14532.1    138 sp|P68579|SUNT_BACSU -            705   0.00051   20.1   0.0   1   1   5.3e-06    0.0027   17.7   0.0     6    44   494   532   491   564 0.87 Sigma-54 interaction domain
IstB_IS21            PF01695.12   178 sp|P68579|SUNT_BACSU -            705   0.00053   19.4   0.0   1   2   0.00043      0.22   10.9   0.0    44    68   506   530   501   541 0.91 IstB-like ATP binding protein
AAA_22               PF13401.1    131 sp|P68579|SUNT_BACSU -            705   0.00079   19.5   0.4   1   1   1.5e-05    0.0078   16.3   0.4     7    44   512   563   506   675 0.69 AAA domain
Septin               PF00735.13   281 sp|P68579|SUNT_BACSU -            705    0.0021   17.1   0.0   1   1     9e-06    0.0046   16.0   0.0     7    81   512   587   509   618 0.81 Septin
AAA_29               PF13555.1     62 sp|P68579|SUNT_BACSU -            705    0.0027   17.2   0.0   1   1   1.1e-05    0.0058   16.1   0.0    20    46   507   532   499   544 0.76 P-loop containing region of AAA domain
AAA_5                PF07728.9    139 sp|P68579|SUNT_BACSU -            705    0.0027   17.4   0.0   1   1   1.1e-05    0.0054   16.4   0.0     2    29   512   541   511   591 0.81 AAA domain (dynein-related subfamily)
AAA_18               PF13238.1    129 sp|P68579|SUNT_BACSU -            705    0.0037   17.5   0.3   1   1   7.3e-06    0.0037   17.5   0.3     1    23   512   546   512   675 0.67 AAA domain
Guanylate_cyc_2      PF09778.4    212 sp|P68579|SUNT_BACSU -            705    0.0053   15.9   0.0   1   1   8.2e-05     0.042   13.0   0.0     2    28     8    34     7    66 0.83 Guanylylate cyclase
AAA_25               PF13481.1    194 sp|P68579|SUNT_BACSU -            705    0.0066   15.8   0.0   1   1     3e-05     0.015   14.6   0.0    21    54   494   530   481   566 0.86 AAA domain
RNA_helicase         PF00910.17   107 sp|P68579|SUNT_BACSU -            705    0.0079   16.3   0.0   1   1   5.8e-05      0.03   14.5   0.0     1    57   512   564   512   585 0.76 RNA helicase
AAA_24               PF13479.1    213 sp|P68579|SUNT_BACSU -            705     0.016   14.8   0.1   1   1   6.4e-05     0.033   13.7   0.1     4    25   510   531   507   538 0.89 AAA domain
AAA                  PF00004.24   132 sp|P68579|SUNT_BACSU -            705     0.024   14.8   0.2   1   1   0.00036      0.19   11.9   0.0     1    25   512   536   512   647 0.81 ATPase family associated with various cellular activities (AAA)
Miro                 PF08477.8    119 sp|P68579|SUNT_BACSU -            705     0.024   15.1   0.1   1   1   0.00043      0.22   12.0   0.0     1    28   511   539   511   561 0.83 Miro-like protein
AAA_16               PF13191.1    185 sp|P68579|SUNT_BACSU -            705     0.029   14.3   0.1   1   1   0.00019     0.096   12.6   0.0    27    49   512   534   503   551 0.84 AAA ATPase domain
NACHT                PF05729.7    166 sp|P68579|SUNT_BACSU -            705     0.038   13.6   0.7   1   1   0.00024      0.12   12.0   0.0     3    24   512   533   510   539 0.86 NACHT domain
DUF258               PF03193.11   161 sp|P68579|SUNT_BACSU -            705     0.045   12.9   0.0   1   1   0.00018     0.092   11.9   0.0    26    58   499   532   477   548 0.78 Protein of unknown function, DUF258
AAA_30               PF13604.1    196 sp|P68579|SUNT_BACSU -            705     0.046   13.2   0.0   1   1   0.00037      0.19   11.3   0.0    12    47   504   538   500   551 0.83 AAA domain
AAA_33               PF13671.1    143 sp|P68579|SUNT_BACSU -            705     0.061   13.1   0.1   1   1   0.00024      0.12   12.2   0.1     2    21   512   531   512   692 0.86 AAA domain
T2SE                 PF00437.15   272 sp|P68579|SUNT_BACSU -            705     0.071   12.0   0.0   1   1   0.00023      0.12   11.2   0.0   106   156   487   537   427   542 0.68 Type II/IV secretion system protein
SbcCD_C              PF13558.1     90 sp|P68579|SUNT_BACSU -            705     0.079   12.8   0.0   1   1   0.00051      0.26   11.2   0.0    24    89   610   662   596   663 0.77 Putative exonuclease SbcCD, C subunit
MobB                 PF03205.9    140 sp|P68579|SUNT_BACSU -            705     0.087   12.5   0.0   1   1    0.0014       0.7    9.5   0.1     3    22   512   531   511   541 0.88 Molybdopterin guanine dinucleotide synthesis protein B
FtsK_SpoIIIE         PF01580.13   205 sp|P68579|SUNT_BACSU -            705      0.11   11.9   0.0   1   1   0.00037      0.19   11.1   0.0    39    58   510   529   466   531 0.84 FtsK/SpoIIIE family
AAA_14               PF13173.1    128 sp|P68579|SUNT_BACSU -            705      0.21   11.5   0.1   1   1   0.00041      0.21   11.5   0.1     4    48   511   556   508   592 0.70 AAA domain
ACR_tran             PF00873.14  1021 sp|O31501|SWRC_BACSU -           1052  1.2e-204  681.7  28.1   1   1  1.1e-206  5.4e-203  676.3  28.1     2  1020     5  1039     4  1040 0.94 AcrB/AcrD/AcrF family
SecD_SecF            PF02355.11   189 sp|O31501|SWRC_BACSU -           1052   5.6e-16   58.2  28.4   1   3   1.3e-10   6.7e-07   28.6  10.0    34   182   368   520   334   527 0.78 Protein export membrane protein
SecD_SecF            PF02355.11   189 sp|O31501|SWRC_BACSU -           1052   5.6e-16   58.2  28.4   3   3   2.9e-12   1.4e-08   34.1  10.1    12   182   863  1031   851  1038 0.85 Protein export membrane protein
HMGL-like            PF00682.14   237 sp|O31501|SWRC_BACSU -           1052      0.32   10.6   5.2   1   3   0.00017      0.85    9.2   0.0    51   118    50   117    42   175 0.83 HMGL-like
tRNA-synt_2c         PF01411.14   552 sp|O34526|SYA_BACSU  -            878  1.6e-220  733.0   0.2   1   1  2.7e-223  2.4e-220  732.5   0.2     1   551     8   557     8   558 0.99 tRNA synthetases class II (A)
tRNA_SAD             PF07973.9     44 sp|O34526|SYA_BACSU  -            878   1.5e-19   69.5   0.9   1   1   1.7e-22   1.5e-19   69.5   0.9     1    44   655   698   655   698 0.99 Threonyl and Alanyl tRNA synthetase second additional domain
DHHA1                PF02272.14    68 sp|O34526|SYA_BACSU  -            878   4.1e-19   68.0   2.7   1   1   1.3e-21   1.1e-18   66.6   2.7     2    67   802   871   801   872 0.94 DHHA1 domain
HOOK                 PF05622.7    713 sp|O34526|SYA_BACSU  -            878    0.0052   14.6   0.5   1   1     1e-05    0.0091   13.8   0.5   181   291   713   839   695   842 0.78 HOOK protein
FliD_C               PF07195.7    239 sp|O34526|SYA_BACSU  -            878     0.023   14.0   0.0   1   1   5.7e-05      0.05   12.8   0.0    89   232   561   750   538   757 0.70 Flagellar hook-associated protein 2 C-terminus
Myosin_tail_1        PF01576.14   859 sp|O34526|SYA_BACSU  -            878     0.025   12.3   1.3   1   1   5.1e-05     0.044   11.5   1.3   557   615   708   766   703   815 0.85 Myosin tail
EzrA                 PF06160.7    560 sp|O34526|SYA_BACSU  -            878     0.026   12.7   0.1   1   1   2.9e-05     0.026   12.7   0.1   179   227   696   744   689   757 0.91 Septation ring formation regulator, EzrA
Seryl_tRNA_N         PF02403.17   108 sp|O34526|SYA_BACSU  -            878     0.051   13.5   3.1   1   1   0.00014      0.13   12.3   1.7    58   107   712   758   706   759 0.87 Seryl-tRNA synthetase N-terminal domain
DivIC                PF04977.10    80 sp|O34526|SYA_BACSU  -            878       0.1   12.1   3.7   1   2   0.00039      0.34   10.4   0.5    14    51   701   738   697   740 0.92 Septum formation initiator
Filament             PF00038.16   312 sp|O34526|SYA_BACSU  -            878      0.17   11.3   5.7   2   2   0.00023       0.2   11.1   1.3   199   251   708   760   703   782 0.90 Intermediate filament protein
DUF4201              PF13870.1    177 sp|O34526|SYA_BACSU  -            878      0.47    9.8   4.2   1   1   0.00022      0.19   11.1   1.2    89   161   709   780   705   801 0.79 Domain of unknown function (DUF4201)
FliJ                 PF02050.11   123 sp|O34526|SYA_BACSU  -            878      0.56   10.2   4.4   2   2   0.00048      0.42   10.6   0.4    49    92   708   751   698   753 0.92 Flagellar FliJ protein
CENP-F_leu_zip       PF10473.4    140 sp|O34526|SYA_BACSU  -            878       2.3    8.0  10.1   1   2   0.00086      0.75    9.6   1.7    43    90   709   756   703   760 0.88 Leucine-rich repeats of kinetochore protein Cenp-F/LEK1
CENP-F_leu_zip       PF10473.4    140 sp|O34526|SYA_BACSU  -            878       2.3    8.0  10.1   2   2   0.00055      0.48   10.2   0.9     8    87   737   818   732   823 0.85 Leucine-rich repeats of kinetochore protein Cenp-F/LEK1
tRNA-synt_1e         PF01406.14   301 sp|Q06752|SYC_BACSU  -            466  3.5e-139  463.0   0.2   1   3  1.9e-142  3.5e-139  463.0   0.2     2   300    16   313    15   314 0.99 tRNA synthetases class I (C) catalytic domain
DALR_2               PF09190.6     63 sp|Q06752|SYC_BACSU  -            466   1.2e-16   60.7   0.6   1   1     2e-19   3.6e-16   59.1   0.6     1    57   353   411   353   416 0.91 DALR domain
tRNA-synt_1g         PF09334.6    391 sp|Q06752|SYC_BACSU  -            466   5.9e-14   51.5   0.7   1   2   8.2e-07    0.0015   17.2   0.1    12   123    35   145    26   156 0.87 tRNA synthetases class I (M)
tRNA-synt_1g         PF09334.6    391 sp|Q06752|SYC_BACSU  -            466   5.9e-14   51.5   0.7   2   2   1.8e-11   3.3e-08   32.5   0.1   312   389   251   329   223   331 0.82 tRNA synthetases class I (M)
tRNA-synt_1          PF00133.17   601 sp|Q06752|SYC_BACSU  -            466   1.8e-09   36.1   0.1   1   2   0.00022      0.41    8.5   0.1    27    67    26    66    11   150 0.86 tRNA synthetases class I (I, L, M and V)
tRNA-synt_1          PF00133.17   601 sp|Q06752|SYC_BACSU  -            466   1.8e-09   36.1   0.1   2   2   3.5e-09   6.5e-06   24.4   0.0   515   593   221   297   205   305 0.87 tRNA synthetases class I (I, L, M and V)
tRNA-synt_1f         PF01921.13   360 sp|Q06752|SYC_BACSU  -            466   2.3e-09   36.4   0.1   1   2   5.7e-05      0.11   11.2   0.0    30    80    30    81    12   103 0.82 tRNA synthetases class I (K)
tRNA-synt_1f         PF01921.13   360 sp|Q06752|SYC_BACSU  -            466   2.3e-09   36.4   0.1   2   2   1.2e-08   2.3e-05   23.2   0.1   274   348   259   331   109   342 0.78 tRNA synthetases class I (K)
tRNA-synt_1d         PF00750.14   354 sp|Q06752|SYC_BACSU  -            466   4.6e-05   22.4   0.6   1   4     7e-06     0.013   14.3   0.0     9    62    12    64     4    83 0.81 tRNA synthetases class I (R)
Dna2                 PF08696.6    209 sp|Q06752|SYC_BACSU  -            466     0.041   13.2   0.1   1   1   5.7e-05      0.11   11.8   0.0   107   162    78   133    70   147 0.86 DNA replication factor Dna2
tRNA-synt_2          PF00152.15   335 sp|O32038|SYDND_BACSU -            592  5.7e-135  449.4   0.0   1   1  2.3e-138  6.7e-135  449.1   0.0     1   334   123   561   123   562 0.98 tRNA synthetases class II (D, K and N)
GAD                  PF02938.9     95 sp|O32038|SYDND_BACSU -            592   5.4e-32  109.8   0.6   1   1   3.7e-35   1.1e-31  108.8   0.6     1    95   314   408   314   408 0.98 GAD domain
tRNA_anti-codon      PF01336.20    75 sp|O32038|SYDND_BACSU -            592   1.3e-16   60.1   0.4   1   1   8.6e-20   2.5e-16   59.2   0.4     1    74    20   104    20   105 0.93 OB-fold nucleic acid binding domain
tRNA-synt_2b         PF00587.20   173 sp|O32038|SYDND_BACSU -            592   4.1e-06   26.4   0.2   2   2     5e-07    0.0015   18.1   0.3    85   138   214   265   203   297 0.79 tRNA synthetase class II core domain (G, H, P, S and T)
tRNA-synt_2d         PF01409.15   247 sp|O32038|SYDND_BACSU -            592    0.0022   17.2   0.1   1   2   7.9e-05      0.23   10.5   0.0   104   151   214   259   199   287 0.73 tRNA synthetases class II core domain (F)
tRNA-synt_1c         PF00749.16   314 sp|P22250|SYE_BACSU  -            483  1.2e-132  441.4   0.0   1   1    1e-136  1.5e-132  441.0   0.0     1   314     4   323     4   323 1.00 tRNA synthetases class I (E and Q), catalytic domain
tRNA-synt_2d         PF01409.15   247 sp|P17921|SYFA_BACSU -            344  8.3e-109  362.5   0.0   1   1  2.1e-112    1e-108  362.2   0.0     2   247    93   341    92   341 0.98 tRNA synthetases class II core domain (F)
Phe_tRNA-synt_N      PF02912.13    73 sp|P17921|SYFA_BACSU -            344   4.1e-27   93.6   3.5   2   2   8.3e-31   4.1e-27   93.6   3.5     2    73    18    89    17    89 0.98 Aminoacyl tRNA synthetase class II, N-terminal domain
B3_4                 PF03483.12   174 sp|P17922|SYFB_BACSU -            804   1.3e-63  213.5   0.0   1   1   7.5e-67   2.2e-63  212.8   0.0     2   174   222   394   221   394 0.98 B3/4 domain
FDX-ACB              PF03147.9     94 sp|P17922|SYFB_BACSU -            804   1.3e-29  102.1   0.1   1   1   1.2e-32   3.4e-29  100.8   0.1     1    94   710   803   710   803 0.99 Ferredoxin-fold anticodon binding domain
tRNA_bind            PF01588.15    95 sp|P17922|SYFB_BACSU -            804   8.2e-26   89.6   1.6   1   1   3.3e-29   9.8e-26   89.4   0.3     1    94    46   152    46   153 0.93 Putative tRNA binding domain
B5                   PF03484.10    70 sp|P17922|SYFB_BACSU -            804   2.1e-18   65.9   0.1   1   1   1.6e-21   4.8e-18   64.7   0.1     2    70   412   479   411   479 0.97 tRNA synthetase B5 domain
DUF2191              PF09957.4     47 sp|P17922|SYFB_BACSU -            804     0.082   12.7   0.1   1   1   9.2e-05      0.27   11.0   0.1     5    21   463   479   460   481 0.91 Uncharacterized protein conserved in bacteria (DUF2191)
tRNA-synt_2e         PF02091.10   284 sp|P54380|SYGA_BACSU -            295  5.1e-160  531.0   0.1   1   1  3.9e-164  5.8e-160  530.9   0.1     1   284     3   286     3   286 1.00 Glycyl-tRNA synthetase alpha subunit
tRNA_synt_2f         PF02092.12   549 sp|P54381|SYGB_BACSU -            679  3.7e-218  725.5   0.9   1   2    3e-221  8.9e-218  724.2   0.1     1   548     6   543     6   544 0.99 Glycyl-tRNA synthetase beta subunit
DALR_1               PF05746.10   119 sp|P54381|SYGB_BACSU -            679   0.00054   19.9   2.6   2   2   2.5e-07   0.00075   19.4   0.4     9   102   578   665   571   673 0.82 DALR anticodon binding domain
DUF328               PF03883.9    237 sp|P54381|SYGB_BACSU -            679     0.038   13.2   0.1   1   1   2.8e-05     0.082   12.1   0.1   130   216   507   598   502   624 0.84 Protein of unknown function (DUF328)
Peptidase_C36        PF05415.6    104 sp|P54381|SYGB_BACSU -            679      0.11   12.3   0.0   1   1    0.0001      0.31   10.9   0.0    35    94    27    85     7    91 0.83 Beet necrotic yellow vein furovirus-type papain-like endopeptidase
tRNA-synt_His        PF13393.1    311 sp|O32039|SYH_BACSU  -            424   2.4e-50  171.3   0.0   1   1   1.1e-53   3.9e-50  170.6   0.0     1   311     8   313     8   313 0.85 Histidyl-tRNA synthetase
tRNA-synt_2b         PF00587.20   173 sp|O32039|SYH_BACSU  -            424   4.5e-36  124.0   0.1   1   2   1.7e-37   6.2e-34  117.0   0.1     3   165    21   179    19   187 0.95 tRNA synthetase class II core domain (G, H, P, S and T)
HGTP_anticodon       PF03129.15    94 sp|O32039|SYH_BACSU  -            424   1.1e-21   76.5   0.8   3   3   7.1e-23   2.6e-19   68.9   0.5     1    93   331   420   331   421 0.97 Anticodon binding domain
tRNA-synt_2d         PF01409.15   247 sp|O32039|SYH_BACSU  -            424     0.022   13.9   0.1   1   2   2.2e-05     0.081   12.1   0.0    10   129    11   129     2   164 0.69 tRNA synthetases class II core domain (F)
tRNA-synt_1          PF00133.17   601 sp|Q45477|SYI_BACSU  -            921  6.4e-222  737.8   0.1   1   1  3.3e-225  8.1e-222  737.4   0.1     2   601    27   633    26   633 0.97 tRNA synthetases class I (I, L, M and V)
Anticodon_1          PF08264.8    153 sp|Q45477|SYI_BACSU  -            921     2e-33  115.2   1.5   1   1   1.7e-36   4.3e-33  114.2   1.5     1   151   677   830   677   832 0.90 Anticodon-binding domain of tRNA
tRNA-synt_1g         PF09334.6    391 sp|Q45477|SYI_BACSU  -            921   1.2e-27   96.6   0.1   1   3   8.7e-17   2.1e-13   49.6   0.0     8   136    57   200    53   208 0.78 tRNA synthetases class I (M)
tRNA-synt_1g         PF09334.6    391 sp|Q45477|SYI_BACSU  -            921   1.2e-27   96.6   0.1   2   3   1.1e-07   0.00028   19.6   0.0   147   239   372   465   344   492 0.77 tRNA synthetases class I (M)
tRNA-synt_1g         PF09334.6    391 sp|Q45477|SYI_BACSU  -            921   1.2e-27   96.6   0.1   3   3     1e-08   2.5e-05   23.1   0.0   312   370   578   636   565   652 0.79 tRNA synthetases class I (M)
tRNA-synt_1e         PF01406.14   301 sp|Q45477|SYI_BACSU  -            921   1.1e-09   37.8   0.0   1   2   3.2e-05     0.078   12.0   0.0    21   125    61   181    53   211 0.76 tRNA synthetases class I (C) catalytic domain
tRNA-synt_1e         PF01406.14   301 sp|Q45477|SYI_BACSU  -            921   1.1e-09   37.8   0.0   2   2     1e-08   2.6e-05   23.5   0.0   225   299   565   640   540   642 0.80 tRNA synthetases class I (C) catalytic domain
tRNA-synt_1_2        PF13603.1    185 sp|Q45477|SYI_BACSU  -            921   1.9e-06   27.3   0.0   1   1     2e-09   4.8e-06   25.9   0.0    21   141   226   349   205   379 0.76 Leucyl-tRNA synthetase, Domain 2
tRNA-synt_1f         PF01921.13   360 sp|Q45477|SYI_BACSU  -            921   0.00083   18.1   0.0   2   2   3.4e-06    0.0083   14.8   0.0   263   339   573   650   552   669 0.71 tRNA synthetases class I (K)
tRNA-synt_2          PF00152.15   335 sp|P37477|SYK_BACSU  -            499   4.5e-97  324.8   1.2   2   2  1.2e-100   4.5e-97  324.8   1.2     2   334   159   497   158   498 0.92 tRNA synthetases class II (D, K and N)
tRNA_anti-codon      PF01336.20    75 sp|P37477|SYK_BACSU  -            499   2.8e-15   55.9   0.2   1   1   1.5e-18   5.6e-15   54.9   0.2     1    75    65   142    65   142 0.97 OB-fold nucleic acid binding domain
tRNA-synt_2d         PF01409.15   247 sp|P37477|SYK_BACSU  -            499   3.7e-06   26.3   0.0   1   2   9.4e-06     0.035   13.3   0.0   104   146   250   290   248   313 0.68 tRNA synthetases class II core domain (F)
tRNA-synt_2d         PF01409.15   247 sp|P37477|SYK_BACSU  -            499   3.7e-06   26.3   0.0   2   2   7.4e-05      0.27   10.3   0.0   212   236   466   490   420   495 0.88 tRNA synthetases class II core domain (F)
tRNA-synt_2b         PF00587.20   173 sp|P37477|SYK_BACSU  -            499   2.3e-05   24.0   0.1   1   2   2.8e-05      0.11   12.1   0.0     2    27   183   207   182   210 0.92 tRNA synthetase class II core domain (G, H, P, S and T)
tRNA-synt_2b         PF00587.20   173 sp|P37477|SYK_BACSU  -            499   2.3e-05   24.0   0.1   2   2   0.00019      0.69    9.4   0.1    85   136   250   299   249   325 0.79 tRNA synthetase class II core domain (G, H, P, S and T)
tRNA-synt_1          PF00133.17   601 sp|P36430|SYL_BACSU  -            804   4.6e-73  246.1   4.6   1   2   7.5e-51   1.4e-47  162.0   5.5     2   349    12   403    11   412 0.90 tRNA synthetases class I (I, L, M and V)
tRNA-synt_1          PF00133.17   601 sp|P36430|SYL_BACSU  -            804   4.6e-73  246.1   4.6   2   2   1.4e-24   2.6e-21   75.2   0.0   414   587   412   602   404   616 0.78 tRNA synthetases class I (I, L, M and V)
tRNA-synt_1_2        PF13603.1    185 sp|P36430|SYL_BACSU  -            804   3.4e-69  231.8   0.1   1   1   3.1e-72   5.8e-69  231.1   0.1     1   185   219   399   219   399 0.97 Leucyl-tRNA synthetase, Domain 2
tRNA-synt_1g         PF09334.6    391 sp|P36430|SYL_BACSU  -            804   5.5e-28   97.7   0.0   1   3   5.7e-22   1.1e-18   67.1   0.0     8   135    40   170    37   227 0.89 tRNA synthetases class I (M)
tRNA-synt_1g         PF09334.6    391 sp|P36430|SYL_BACSU  -            804   5.5e-28   97.7   0.0   3   3   2.4e-08   4.5e-05   22.2   0.0   312   367   560   616   527   622 0.78 tRNA synthetases class I (M)
Anticodon_1          PF08264.8    153 sp|P36430|SYL_BACSU  -            804   6.9e-20   71.3   0.1   1   1   1.9e-22   3.4e-19   69.0   0.1     6   149   655   766   651   771 0.85 Anticodon-binding domain of tRNA
tRNA-synt_1e         PF01406.14   301 sp|P36430|SYL_BACSU  -            804   0.00014   21.1   0.0   2   2     3e-05     0.055   12.5   0.0   247   289   570   613   554   625 0.73 tRNA synthetases class I (C) catalytic domain
tRNA-synt_1f         PF01921.13   360 sp|P36430|SYL_BACSU  -            804    0.0029   16.3   0.0   1   1   4.2e-06    0.0078   14.9   0.0   265   309   557   603   551   613 0.82 tRNA synthetases class I (K)
tRNA-synt_1d         PF00750.14   354 sp|P36430|SYL_BACSU  -            804    0.0061   15.4   0.0   2   2   7.1e-05      0.13   11.0   0.0   275   304   564   592   524   603 0.77 tRNA synthetases class I (R)
tRNA-synt_1g         PF09334.6    391 sp|P37465|SYM_BACSU  -            664  2.8e-136  454.2   0.0   1   1  2.5e-139  4.6e-136  453.5   0.0     1   391     8   375     8   375 0.94 tRNA synthetases class I (M)
tRNA-synt_1          PF00133.17   601 sp|P37465|SYM_BACSU  -            664   3.8e-34  117.6   0.4   1   3   3.7e-16   6.9e-13   47.4   1.0    21   101     4    82     1   155 0.75 tRNA synthetases class I (I, L, M and V)
tRNA-synt_1          PF00133.17   601 sp|P37465|SYM_BACSU  -            664   3.8e-34  117.6   0.4   2   3   0.00014      0.26    9.2   0.0   366   430   161   230   138   235 0.85 tRNA synthetases class I (I, L, M and V)
tRNA-synt_1          PF00133.17   601 sp|P37465|SYM_BACSU  -            664   3.8e-34  117.6   0.4   3   3   4.5e-18   8.3e-15   53.8   0.0   483   594   235   344   231   350 0.91 tRNA synthetases class I (I, L, M and V)
tRNA_bind            PF01588.15    95 sp|P37465|SYM_BACSU  -            664   5.7e-28   96.5   0.3   1   1   5.3e-31   9.7e-28   95.8   0.3     1    95   570   662   570   662 0.98 Putative tRNA binding domain
tRNA-synt_1e         PF01406.14   301 sp|P37465|SYM_BACSU  -            664   8.3e-16   57.9   0.9   1   2   2.1e-13   3.9e-10   39.3   0.1    11   153     7   151     1   164 0.83 tRNA synthetases class I (C) catalytic domain
tRNA-synt_1e         PF01406.14   301 sp|P37465|SYM_BACSU  -            664   8.3e-16   57.9   0.9   2   2   1.8e-06    0.0034   16.5   0.0   237   282   295   340   267   344 0.87 tRNA synthetases class I (C) catalytic domain
Anticodon_1          PF08264.8    153 sp|P37465|SYM_BACSU  -            664   4.4e-10   39.5   0.6   1   1     5e-13   9.2e-10   38.4   0.6     1   128   397   533   397   556 0.74 Anticodon-binding domain of tRNA
tRNA-synt_1d         PF00750.14   354 sp|P37465|SYM_BACSU  -            664   1.2e-06   27.5   0.1   1   2   1.6e-06     0.003   16.4   0.1    31   107    17    91    14   140 0.75 tRNA synthetases class I (R)
tRNA-synt_1d         PF00750.14   354 sp|P37465|SYM_BACSU  -            664   1.2e-06   27.5   0.1   2   2   0.00042      0.78    8.4   0.0   258   304   285   327   200   334 0.86 tRNA synthetases class I (R)
tRNA-synt_1f         PF01921.13   360 sp|P37465|SYM_BACSU  -            664   4.5e-06   25.5   0.0   1   2   0.00032      0.59    8.7   0.0    31    71    15    55     3   101 0.82 tRNA synthetases class I (K)
tRNA-synt_1f         PF01921.13   360 sp|P37465|SYM_BACSU  -            664   4.5e-06   25.5   0.0   2   2   5.9e-06     0.011   14.4   0.0   262   314   291   343   271   352 0.82 tRNA synthetases class I (K)
tRNA-synt_2          PF00152.15   335 sp|P39772|SYN_BACSU  -            430   1.6e-86  290.1   0.0   1   1   4.6e-90   2.3e-86  289.6   0.0     3   332   111   423   109   426 0.93 tRNA synthetases class II (D, K and N)
tRNA_anti-codon      PF01336.20    75 sp|P39772|SYN_BACSU  -            430   2.7e-16   59.1   0.6   1   1   1.2e-19   6.1e-16   58.0   0.6     1    75    16    95    16    95 0.96 OB-fold nucleic acid binding domain
tRNA-synt_2b         PF00587.20   173 sp|P39772|SYN_BACSU  -            430   9.6e-05   22.0   0.1   2   3   0.00011      0.53    9.8   0.0     1    28   132   158   132   179 0.92 tRNA synthetase class II core domain (G, H, P, S and T)
tRNA-synt_2b         PF00587.20   173 sp|O31755|SYP_BACSU  -            564   2.7e-39  134.5   0.2   1   1   1.4e-42   4.1e-39  133.9   0.2     3   167    51   213    49   219 0.97 tRNA synthetase class II core domain (G, H, P, S and T)
tRNA_edit            PF04073.10   123 sp|O31755|SYP_BACSU  -            564   4.2e-31  107.3   0.8   1   1   2.4e-34   7.1e-31  106.6   0.8     1   118   257   372   257   376 0.97 Aminoacyl-tRNA editing domain
HGTP_anticodon       PF03129.15    94 sp|O31755|SYP_BACSU  -            564   1.6e-20   72.8   0.2   1   1   1.4e-23   4.3e-20   71.4   0.2     3    93   474   563   472   564 0.95 Anticodon binding domain
TIR_2                PF13676.1    102 sp|O31755|SYP_BACSU  -            564      0.04   14.0   0.0   1   1   3.8e-05      0.11   12.6   0.0     9    41   485   518   481   520 0.87 TIR domain
tRNA-synt_1d         PF00750.14   354 sp|P46906|SYR_BACSU  -            556   6.1e-81  271.9   0.1   1   1   1.5e-83   2.5e-80  269.9   0.1     2   306   104   400   103   422 0.92 tRNA synthetases class I (R)
DALR_1               PF05746.10   119 sp|P46906|SYR_BACSU  -            556     2e-39  134.2   0.7   1   1   3.3e-42   5.5e-39  132.8   0.2     2   119   438   556   437   556 0.98 DALR anticodon binding domain
Arg_tRNA_synt_N      PF03485.11    85 sp|P46906|SYR_BACSU  -            556   3.7e-27   94.6   0.6   1   1   1.5e-29   2.4e-26   92.0   0.4     3    84    11    94     5    95 0.88 Arginyl tRNA synthetase N terminal domain
tRNA-synt_1g         PF09334.6    391 sp|P46906|SYR_BACSU  -            556   4.1e-09   35.5   1.6   2   4   0.00031      0.52    8.9   0.0    72   124   244   296   216   329 0.88 tRNA synthetases class I (M)
tRNA-synt_1g         PF09334.6    391 sp|P46906|SYR_BACSU  -            556   4.1e-09   35.5   1.6   4   4   1.4e-08   2.2e-05   23.2   0.1   316   372   371   426   341   434 0.70 tRNA synthetases class I (M)
tRNA-synt_1e         PF01406.14   301 sp|P46906|SYR_BACSU  -            556   1.1e-07   31.2   0.0   1   2   5.4e-06    0.0089   15.1   0.0    21   132   136   295   116   311 0.81 tRNA synthetases class I (C) catalytic domain
tRNA-synt_1e         PF01406.14   301 sp|P46906|SYR_BACSU  -            556   1.1e-07   31.2   0.0   2   2   2.5e-05     0.042   12.9   0.1   250   292   379   421   366   430 0.88 tRNA synthetases class I (C) catalytic domain
tRNA-synt_1f         PF01921.13   360 sp|P46906|SYR_BACSU  -            556     1e-06   27.7   1.2   4   4   6.3e-07     0.001   17.8   0.0   280   329   378   429   340   457 0.85 tRNA synthetases class I (K)
tRNA-synt_1          PF00133.17   601 sp|P46906|SYR_BACSU  -            556   1.7e-05   23.0   0.1   1   2   0.00046      0.76    7.6   0.0    33    74   133   174   114   237 0.86 tRNA synthetases class I (I, L, M and V)
tRNA-synt_1          PF00133.17   601 sp|P46906|SYR_BACSU  -            556   1.7e-05   23.0   0.1   2   2   1.2e-05      0.02   12.9   0.0   558   593   379   414   365   423 0.82 tRNA synthetases class I (I, L, M and V)
CopK                 PF11525.3     73 sp|P46906|SYR_BACSU  -            556     0.072   12.7   0.1   1   1   0.00013      0.21   11.2   0.1    18    39   372   394   363   398 0.92 Copper resistance protein K
tRNA-synt_2b         PF00587.20   173 sp|P37464|SYS_BACSU  -            425   6.7e-41  139.7   0.0   1   1   1.5e-43   1.2e-40  138.9   0.0     1   173   173   344   173   344 0.98 tRNA synthetase class II core domain (G, H, P, S and T)
Seryl_tRNA_N         PF02403.17   108 sp|P37464|SYS_BACSU  -            425   3.8e-32  110.5   7.3   1   1   9.7e-35     8e-32  109.4   7.3     1   108     1   108     1   108 1.00 Seryl-tRNA synthetase N-terminal domain
Mnd1                 PF03962.10   188 sp|P37464|SYS_BACSU  -            425     0.021   14.5   2.3   1   1   5.7e-05     0.047   13.3   2.3    63   130    30    94    27   102 0.85 Mnd1 family
TBPIP                PF07106.8    169 sp|P37464|SYS_BACSU  -            425     0.024   14.1   2.3   1   1   6.4e-05     0.052   13.0   2.3    76   140    33    98     3   121 0.65 Tat binding protein 1(TBP-1)-interacting protein (TBPIP)
FliT                 PF05400.8     84 sp|P37464|SYS_BACSU  -            425     0.025   14.9   4.1   1   1   7.9e-05     0.065   13.6   2.3     9    77    27    89    20    95 0.86 Flagellar protein FliT
DUF342               PF03961.8    451 sp|P37464|SYS_BACSU  -            425     0.038   12.4   1.9   1   1   7.1e-05     0.058   11.7   1.9   334   408    29   100    13   123 0.87 Protein of unknown function (DUF342)
FlgN                 PF05130.7    143 sp|P37464|SYS_BACSU  -            425     0.079   13.2   2.2   1   2   0.00085       0.7   10.1   1.6    35    99    27    96     9   105 0.70 FlgN protein
Shikimate_DH         PF01488.15   135 sp|P37464|SYS_BACSU  -            425     0.092   12.8   0.1   1   1   0.00025      0.21   11.6   0.1    36    97    56   119    46   133 0.84 Shikimate / quinate 5-dehydrogenase
NPV_P10              PF05531.7     75 sp|P37464|SYS_BACSU  -            425      0.11   12.7   2.0   1   1   0.00045      0.37   11.0   1.2    14    74    53   108    43   109 0.66 Nucleopolyhedrovirus P10 protein
APG6                 PF04111.7    315 sp|P37464|SYS_BACSU  -            425      0.12   11.4   3.6   1   1   0.00024       0.2   10.6   2.5    51   116    30    98     4   108 0.54 Autophagy protein Apg6
IncA                 PF04156.9    191 sp|P37464|SYS_BACSU  -            425      0.15   11.6   2.9   1   1   0.00044      0.36   10.3   2.9   104   190    31    85     8   106 0.55 IncA protein
DUF1664              PF07889.7    126 sp|P37464|SYS_BACSU  -            425      0.22   11.3   3.3   1   1   0.00049       0.4   10.4   3.3    57   122    32   100     8   102 0.87 Protein of unknown function (DUF1664)
Borrelia_P83         PF05262.6    489 sp|P37464|SYS_BACSU  -            425      0.22    9.7   4.1   1   1   0.00034      0.28    9.3   4.1   182   275     7   101     1   136 0.82 Borrelia P83/100 protein
DUF972               PF06156.8    107 sp|P37464|SYS_BACSU  -            425      0.27   11.6   2.6   1   1   0.00024       0.2   12.0   0.6     3    57    38    95    25   122 0.71 Protein of unknown function (DUF972)
DUF724               PF05266.9    190 sp|P37464|SYS_BACSU  -            425      0.31   10.6   4.8   1   1   0.00081      0.67    9.5   4.8   101   186    14   101     6   103 0.85 Protein of unknown function (DUF724)
tRNA-synt_2b         PF00587.20   173 sp|P18255|SYT1_BACSU -            643   1.4e-45  154.9   0.3   1   1   7.2e-49   2.7e-45  154.0   0.3     1   172   276   445   276   446 0.97 tRNA synthetase class II core domain (G, H, P, S and T)
HGTP_anticodon       PF03129.15    94 sp|P18255|SYT1_BACSU -            643   4.3e-25   87.4   0.6   1   1   3.3e-28   1.2e-24   86.0   0.6     1    91   549   637   549   640 0.94 Anticodon binding domain
tRNA_SAD             PF07973.9     44 sp|P18255|SYT1_BACSU -            643   1.7e-16   59.7   0.0   1   1   1.2e-19   4.6e-16   58.4   0.0     1    44   172   221   172   221 0.99 Threonyl and Alanyl tRNA synthetase second additional domain
TGS                  PF02824.16    60 sp|P18255|SYT1_BACSU -            643   1.7e-14   53.3   0.0   1   1   2.2e-17   8.3e-14   51.1   0.0     1    60     5    64     5    64 0.98 TGS domain
tRNA-synt_2b         PF00587.20   173 sp|P18256|SYT2_BACSU -            638   5.2e-46  156.3   0.7   1   1   5.2e-49   1.5e-45  154.8   0.5     1   157   275   428   275   441 0.92 tRNA synthetase class II core domain (G, H, P, S and T)
HGTP_anticodon       PF03129.15    94 sp|P18256|SYT2_BACSU -            638     2e-22   78.9   0.5   1   1   2.2e-25   6.4e-22   77.3   0.5     1    93   542   631   542   632 0.97 Anticodon binding domain
tRNA_SAD             PF07973.9     44 sp|P18256|SYT2_BACSU -            638   1.1e-16   60.3   0.0   1   1     1e-19     3e-16   59.0   0.0     1    44   172   221   172   221 0.98 Threonyl and Alanyl tRNA synthetase second additional domain
TGS                  PF02824.16    60 sp|P18256|SYT2_BACSU -            638   1.7e-16   59.8   0.4   1   3     2e-18   5.9e-15   54.8   0.0     1    60     5    64     5    64 0.98 TGS domain
STN                  PF07660.9     52 sp|P18256|SYT2_BACSU -            638     0.076   12.5   0.0   1   1   5.7e-05      0.17   11.4   0.0    26    46   439   460   437   462 0.90 Secretin and TonB N terminus short domain
tRNA-synt_1          PF00133.17   601 sp|Q05873|SYV_BACSU  -            880  3.2e-234  778.4   5.8   1   1  4.3e-236  6.4e-233  774.1   4.7     2   601    21   565    20   565 0.99 tRNA synthetases class I (I, L, M and V)
Anticodon_1          PF08264.8    153 sp|Q05873|SYV_BACSU  -            880   1.9e-44  151.0   0.2   1   1   2.3e-47   3.5e-44  150.2   0.2     1   153   608   756   608   756 0.91 Anticodon-binding domain of tRNA
tRNA-synt_1g         PF09334.6    391 sp|Q05873|SYV_BACSU  -            880   2.6e-34  118.5   1.2   1   2   1.2e-14   1.7e-11   43.4   0.0     6   135    47   194    42   206 0.75 tRNA synthetases class I (M)
tRNA-synt_1g         PF09334.6    391 sp|Q05873|SYV_BACSU  -            880   2.6e-34  118.5   1.2   2   2   1.1e-22   1.7e-19   69.7   1.3   173   376   353   574   322   584 0.81 tRNA synthetases class I (M)
Val_tRNA-synt_C      PF10458.4     66 sp|Q05873|SYV_BACSU  -            880   4.5e-23   81.0   8.1   1   1   8.1e-26   1.2e-22   79.7   8.1     1    66   814   879   814   879 0.98 Valyl tRNA synthetase tRNA binding arm
tRNA-synt_1_2        PF13603.1    185 sp|Q05873|SYV_BACSU  -            880   4.9e-13   48.7   0.0   1   2   0.00064      0.95    8.7   0.0    12    50   206   244   200   249 0.86 Leucyl-tRNA synthetase, Domain 2
tRNA-synt_1_2        PF13603.1    185 sp|Q05873|SYV_BACSU  -            880   4.9e-13   48.7   0.0   2   2   8.9e-13   1.3e-09   37.6   0.0    86   148   247   309   244   328 0.87 Leucyl-tRNA synthetase, Domain 2
tRNA-synt_1e         PF01406.14   301 sp|Q05873|SYV_BACSU  -            880   7.5e-08   31.8   0.0   1   2   0.00022      0.32   10.0   0.0    17    51    49    83    37   133 0.91 tRNA synthetases class I (C) catalytic domain
tRNA-synt_1e         PF01406.14   301 sp|Q05873|SYV_BACSU  -            880   7.5e-08   31.8   0.0   2   2   3.1e-07   0.00046   19.4   0.0   210   284   481   556   472   574 0.72 tRNA synthetases class I (C) catalytic domain
tRNA-synt_1f         PF01921.13   360 sp|Q05873|SYV_BACSU  -            880   5.3e-05   22.0   0.0   2   3   2.9e-07   0.00042   19.0   0.0   262   325   503   568   483   582 0.81 tRNA synthetases class I (K)
tRNA-synt_1d         PF00750.14   354 sp|Q05873|SYV_BACSU  -            880   0.00015   20.7   0.2   1   3   1.7e-06    0.0025   16.7   0.0    28    61    48    81    31    90 0.87 tRNA synthetases class I (R)
AAA-ATPase_like      PF09820.4    284 sp|Q05873|SYV_BACSU  -            880     0.036   13.2   0.0   1   1   5.4e-05      0.08   12.0   0.0   196   274   562   640   539   643 0.82 Predicted AAA-ATPase
tRNA-synt_1b         PF00579.20   292 sp|P21656|SYW_BACSU  -            330   2.1e-82  276.5   0.1   1   2   1.4e-86   2.1e-82  276.5   0.1     7   291     4   281     1   282 0.96 tRNA synthetases class I (W and Y)
tRNA-synt_1b         PF00579.20   292 sp|P22326|SYY1_BACSU -            422   2.3e-92  309.2   0.0   1   1   6.2e-96   3.1e-92  308.8   0.0     2   292    28   326    27   326 0.98 tRNA synthetases class I (W and Y)
S4                   PF01479.20    48 sp|P22326|SYY1_BACSU -            422   2.9e-11   42.6   0.0   1   1   1.2e-14     6e-11   41.5   0.0     3    48   357   402   356   402 0.97 S4 domain
S4_2                 PF13275.1     65 sp|P22326|SYY1_BACSU -            422     0.041   13.4   0.1   1   1   1.9e-05     0.093   12.3   0.1    24    56   371   403   348   414 0.83 S4 domain
tRNA-synt_1b         PF00579.20   292 sp|P25151|SYY2_BACSU -            413     3e-80  269.4   0.8   1   1   8.4e-84   4.1e-80  269.0   0.8     4   292    48   334    45   334 0.98 tRNA synthetases class I (W and Y)
S4                   PF01479.20    48 sp|P25151|SYY2_BACSU -            413   6.6e-10   38.2   0.1   1   1   3.1e-13   1.5e-09   37.0   0.1     6    38   358   390   356   399 0.93 S4 domain
S4_2                 PF13275.1     65 sp|P25151|SYY2_BACSU -            413    0.0043   16.6   1.1   2   2   2.8e-06     0.014   15.0   0.5     6    57   351   404   345   410 0.80 S4 domain
dCMP_cyt_deam_1      PF00383.17   102 sp|P21335|TADA_BACSU -            161   2.2e-28   97.8   0.4   1   1   1.3e-31   3.1e-28   97.3   0.4     1   101     1   101     1   102 0.98 Cytidine and deoxycytidylate deaminase zinc-binding region
Bd3614-deam          PF14439.1    136 sp|P21335|TADA_BACSU -            161   5.5e-05   23.0   1.0   2   2     1e-07   0.00025   20.8   0.3    76    97    72    93    60   121 0.83 Bd3614-like deaminase
APOBEC_N             PF08210.6    188 sp|P21335|TADA_BACSU -            161   0.00064   19.4   0.0   1   1   3.5e-07   0.00086   18.9   0.0    39   103    37   120     6   132 0.72 APOBEC-like N-terminal domain
MafB19-deam          PF14437.1    146 sp|P21335|TADA_BACSU -            161    0.0031   17.1   0.0   1   1   2.4e-06    0.0059   16.2   0.0    77   118    48    90    29    96 0.86 MafB19-like deaminase
DUF2162              PF09930.4    224 sp|P21335|TADA_BACSU -            161       0.1   11.7   1.2   2   2   0.00013      0.32   10.1   0.9    99   119    74    94    54   102 0.86 Predicted transporter (DUF2162)
Glyco_tran_WecB      PF03808.8    172 sp|P27620|TAGA_BACSU -            256   9.9e-60  200.8   0.0   1   1   8.3e-64   1.2e-59  200.5   0.0     2   172    56   224    55   224 0.98 Glycosyl transferase WecB/TagA/CpsF family
Glyphos_transf       PF04464.9    369 sp|P27621|TAGB_BACSU -            381   4.6e-96  321.7  14.9   1   1   1.1e-99   5.3e-96  321.5  14.9     2   368    19   377    18   378 0.95 CDP-Glycerol:Poly(glycerophosphate) glycerophosphotransferase
Epimerase_2          PF02350.14   346 sp|P27621|TAGB_BACSU -            381   3.7e-06   25.9   0.0   2   2   1.7e-09   8.5e-06   24.7   0.0   140   346   177   377   148   377 0.81 UDP-N-acetylglucosamine 2-epimerase
His_Phos_2           PF00328.17   347 sp|P27621|TAGB_BACSU -            381    0.0059   15.9   0.4   1   1   1.7e-06    0.0085   15.4   0.4   216   295   141   218    77   262 0.85 Histidine phosphatase superfamily (branch 2)
CTP_transf_2         PF01467.21   157 sp|P27623|TAGD_BACSU -            129   2.6e-20   73.0   0.1   1   1   7.9e-24   2.9e-20   72.8   0.1     1   156     5   124     5   125 0.92 Cytidylyltransferase
FAD_syn              PF06574.7    158 sp|P27623|TAGD_BACSU -            129   0.00051   19.7   0.0   1   2   3.7e-07    0.0014   18.3   0.0     7    36     2    31     1    66 0.81 FAD synthetase
Pantoate_ligase      PF02569.10   280 sp|P27623|TAGD_BACSU -            129    0.0074   15.0   0.0   1   1   2.3e-06    0.0087   14.8   0.0    24    57     4    37     1    81 0.85 Pantoate-beta-alanine ligase
DUF816               PF05674.7    171 sp|P27623|TAGD_BACSU -            129    0.0085   15.8   0.4   1   1   2.9e-06     0.011   15.4   0.4    37    76    36    78    17    90 0.74 Baculovirus protein of unknown function (DUF816)
DUF1975              PF09318.5    203 sp|P13484|TAGE_BACSU -            673   7.7e-35  120.3  10.1   1   2   2.6e-38   7.7e-35  120.3  10.1     2   197    19   220    18   227 0.87 Domain of unknown function (DUF1975)
Glycos_transf_1      PF00534.15   172 sp|P13484|TAGE_BACSU -            673   1.7e-34  118.7   0.1   2   2   5.6e-38   1.7e-34  118.7   0.1     5   171   337   501   333   502 0.96 Glycosyl transferases group 1
Glyco_trans_1_4      PF13692.1    135 sp|P13484|TAGE_BACSU -            673   8.7e-13   48.5   0.0   1   1   5.6e-16   1.7e-12   47.6   0.0    10   135   355   488   350   488 0.86 Glycosyl transferases group 1
Glyco_trans_1_2      PF13524.1     92 sp|P13484|TAGE_BACSU -            673   0.00027   21.1   0.0   1   1   2.9e-07   0.00086   19.5   0.0     4    78   427   504   423   516 0.88 Glycosyl transferases group 1
DUF2963              PF11178.3     51 sp|P13484|TAGE_BACSU -            673    0.0015   17.9   3.2   1   4   4.9e-07    0.0015   17.9   3.2     1    42   138   178   138   187 0.86 Protein of unknown function (DUF2963)
Glyphos_transf       PF04464.9    369 sp|P13485|TAGF_BACSU -            746  5.9e-132  439.8   5.2   1   1  1.2e-135  9.2e-132  439.2   5.2     2   369   370   744   369   744 0.98 CDP-Glycerol:Poly(glycerophosphate) glycerophosphotransferase
DUF4480              PF13715.1     88 sp|P13485|TAGF_BACSU -            746    0.0038   17.2   0.1   1   1   1.9e-06     0.014   15.4   0.1    30    66   154   190   143   232 0.88 Domain of unknown function (DUF4480)
ABC2_membrane        PF01061.19   210 sp|P42953|TAGG_BACSU -            275   1.3e-27   96.3  28.7   1   2   2.6e-31   1.3e-27   96.3  28.7     3   210    18   234    16   234 0.91 ABC-2 type transporter
ABC_tran             PF00005.22   137 sp|P42954|TAGH_BACSU -            527   1.9e-19   70.3   0.0   1   1   5.3e-22   8.8e-19   68.1   0.0     2   136    40   170    39   171 0.82 ABC transporter
AAA_17               PF13207.1    121 sp|P42954|TAGH_BACSU -            527   0.00015   22.5   0.2   1   1   2.4e-06     0.004   17.9   0.2     2    23    52    95    51   275 0.67 AAA domain
AAA_21               PF13304.1    303 sp|P42954|TAGH_BACSU -            527   0.00066   19.7   0.0   2   4     4e-07   0.00066   19.7   0.0   207   298   117   201    89   203 0.78 AAA domain
Med2                 PF11214.3    105 sp|P42954|TAGH_BACSU -            527      0.02   14.9   2.7   1   1   1.8e-05      0.03   14.3   0.9    14   102   167   264   164   268 0.75 Mediator complex subunit 2
AAA_29               PF13555.1     62 sp|P42954|TAGH_BACSU -            527     0.024   14.1   0.0   1   1   4.1e-05     0.067   12.7   0.0    17    46    44    72    34    85 0.69 P-loop containing region of AAA domain
DUF3334              PF11813.3    229 sp|P42954|TAGH_BACSU -            527     0.026   14.0   0.7   1   1   3.2e-05     0.052   13.0   0.6    82   177   110   206   105   269 0.76 Protein of unknown function (DUF3334)
Thymidylate_kin      PF02223.12   186 sp|P42954|TAGH_BACSU -            527     0.047   13.0   0.8   1   2   8.3e-05      0.14   11.5   0.0     3    47    56   100    54   130 0.77 Thymidylate kinase
AAA_18               PF13238.1    129 sp|P42954|TAGH_BACSU -            527     0.055   13.7   1.1   1   1    0.0001      0.17   12.2   0.0     1    23    52    78    52   165 0.84 AAA domain
GCD14                PF08704.5    247 sp|P42954|TAGH_BACSU -            527     0.074   12.5   0.5   1   1   9.9e-05      0.16   11.4   0.5   132   224   185   276   177   300 0.69 tRNA methyltransferase complex GCD14 subunit
Glycos_transf_4      PF00953.16   159 sp|O34753|TAGO_BACSU -            358   3.6e-40  137.3  20.0   2   3   4.9e-44   3.6e-40  137.3  20.0     2   158    78   233    77   234 0.95 Glycosyl transferase family 4
YfzA                 PF14118.1     94 sp|O34753|TAGO_BACSU -            358     0.061   13.4   1.1   3   3   8.2e-06     0.061   13.4   1.1    12    50   316   356   305   358 0.90 YfzA-like protein
Transaldolase        PF00923.14   287 sp|P19669|TAL_BACSU  -            212   3.2e-56  190.5   0.7   1   1   2.4e-59   1.8e-55  188.1   0.7     1   242     3   203     3   212 0.93 Transaldolase
HTH_34               PF13601.1     80 sp|P19669|TAL_BACSU  -            212     0.027   14.5   0.0   1   2   1.4e-05       0.1   12.6   0.0    18    69    42    95    30   100 0.85 Winged helix DNA-binding domain
MttA_Hcf106          PF02416.11    53 sp|O31804|TATAC_BACSU -             62   4.3e-21   73.7   0.1   1   1   3.1e-25   4.7e-21   73.6   0.1     1    52     3    54     3    61 0.92 mttA/Hcf106 family
MttA_Hcf106          PF02416.11    53 sp|O31467|TATAD_BACSU -             70   6.5e-22   76.3   0.5   1   1   5.9e-26   8.8e-22   75.9   0.5     1    52     5    56     5    57 0.97 mttA/Hcf106 family
MttA_Hcf106          PF02416.11    53 sp|O05522|TATAY_BACSU -             57   3.9e-24   83.5   0.5   1   1   3.2e-28   4.7e-24   83.2   0.5     1    53     3    55     3    55 0.96 mttA/Hcf106 family
TatC                 PF00902.13   215 sp|P42252|TATCD_BACSU -            242   8.8e-57  191.9  21.5   1   1   2.1e-60     1e-56  191.7  21.5     2   215    10   214     9   214 0.98 Sec-independent protein translocase protein (TatC)
DUF3704              PF12488.3     27 sp|P42252|TATCD_BACSU -            242     0.044   13.4   1.0   2   2   4.8e-05      0.24   11.0   0.1     4    19   113   128   111   131 0.92 Protein of unknown function (DUF3704)
DUF4396              PF14342.1    139 sp|P42252|TATCD_BACSU -            242       5.1    7.1  10.0   1   4   0.00012      0.57   10.2   0.5    83   133    31    84    13    89 0.75 Domain of unknown function (DUF4396)
TatC                 PF00902.13   215 sp|O05523|TATCY_BACSU -            254     5e-62  209.1  26.6   1   1     9e-66   6.7e-62  208.6  26.6     2   215    13   221    12   221 0.97 Sec-independent protein translocase protein (TatC)
Claudin_2            PF13903.1    172 sp|O05523|TATCY_BACSU -            254      0.14   11.8   3.9   1   2     2e-05      0.15   11.7   0.4    93   158    17    80    10    87 0.82 PMP-22/EMP/MP20/Claudin tight junction
ThiF                 PF00899.16   136 sp|O32037|TCDA_BACSU -            254     5e-42  142.9   0.0   1   1   6.5e-45   8.1e-42  142.2   0.0     1   129    21   150    21   158 0.95 ThiF family
2-Hacid_dh_C         PF02826.14   178 sp|O32037|TCDA_BACSU -            254    0.0024   17.0   0.2   1   2   1.8e-05     0.023   13.8   0.2    32    72    18    59     3   109 0.73 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain
ApbA                 PF02558.11   151 sp|O32037|TCDA_BACSU -            254    0.0036   16.7   0.0   1   1   5.3e-06    0.0065   15.9   0.0     1    82    25   104    25   113 0.68 Ketopantoate reductase PanE/ApbA
Saccharop_dh         PF03435.13   386 sp|O32037|TCDA_BACSU -            254    0.0061   15.5   0.2   1   1   7.9e-06    0.0098   14.9   0.2     1    44    25    88    25   143 0.67 Saccharopine dehydrogenase
ELFV_dehydrog        PF00208.16   244 sp|O32037|TCDA_BACSU -            254    0.0063   16.1   0.1   1   1   7.7e-06    0.0096   15.5   0.1    23    79    14    69     8   103 0.80 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase
3HCDH_N              PF02737.13   180 sp|O32037|TCDA_BACSU -            254    0.0081   15.8   0.0   1   1   1.1e-05     0.014   15.0   0.0     1    55    24    78    24   124 0.81 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain
Shikimate_DH         PF01488.15   135 sp|O32037|TCDA_BACSU -            254    0.0096   16.0   0.1   1   1   1.5e-05     0.019   15.0   0.1     5    46    15    56    11   104 0.84 Shikimate / quinate 5-dehydrogenase
UDPG_MGDP_dh_N       PF03721.9    185 sp|O32037|TCDA_BACSU -            254     0.013   14.8   0.0   1   1   2.1e-05     0.026   13.9   0.0     2    43    24    66    23    93 0.88 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain
DAO                  PF01266.19   358 sp|O32037|TCDA_BACSU -            254     0.014   14.3   0.6   1   1   1.6e-05      0.02   13.8   0.6     2    33    25    57    24    66 0.95 FAD dependent oxidoreductase
ETF                  PF01012.16   164 sp|O32037|TCDA_BACSU -            254     0.021   14.5   0.1   1   1   4.4e-05     0.054   13.2   0.1    25    88    14    72     2    88 0.70 Electron transfer flavoprotein domain
TrkA_N               PF02254.13   116 sp|O32037|TCDA_BACSU -            254     0.038   14.0   0.2   1   2   0.00018      0.22   11.5   0.2     1    42    25    67    25    89 0.76 TrkA-N domain
FAD_binding_3        PF01494.14   356 sp|O32037|TCDA_BACSU -            254      0.12   11.3   0.3   1   1   0.00015      0.19   10.7   0.3     3    38    24    60    22    70 0.86 FAD binding domain
MFS_1                PF07690.11   352 sp|P23054|TCRB_BACSU -            458   2.7e-44  151.3  47.3   1   2   5.5e-48   2.7e-44  151.3  47.3     2   347    20   396    19   401 0.87 Major Facilitator Superfamily
Sugar_tr             PF00083.19   451 sp|P23054|TCRB_BACSU -            458   2.1e-06   26.6  11.6   1   3   4.2e-10   2.1e-06   26.6  11.6    49   179    52   177    21   196 0.87 Sugar (and other) transporter
MFS_3                PF05977.8    524 sp|P23054|TCRB_BACSU -            458      0.25    9.3  22.5   1   2     1e-05     0.051   11.6  10.7    13   273    17   277     7   300 0.77 Transmembrane secretion effector
SBP_bac_3            PF00497.15   225 sp|P42199|TCYA_BACSU -            268     2e-56  190.7   6.0   1   1   9.4e-60   2.3e-56  190.5   6.0     1   225    47   264    47   264 0.94 Bacterial extracellular solute-binding proteins, family 3
MtaB                 PF12176.3    461 sp|P42199|TCYA_BACSU -            268    0.0057   15.1   0.2   1   2   4.7e-06     0.012   14.1   0.1    41   166    52   180    38   191 0.80 Methanol-cobalamin methyltransferase B subunit
ATPgrasp_ST          PF14397.1    285 sp|P42199|TCYA_BACSU -            268    0.0082   15.2   0.1   1   1   6.4e-06     0.016   14.3   0.0   163   223    23    81    12    90 0.88 Sugar-transfer associated ATP-grasp
DUF4167              PF13763.1     80 sp|P42199|TCYA_BACSU -            268     0.064   13.2   0.2   1   1   5.8e-05      0.14   12.1   0.2    21    52   142   173   119   180 0.80 Domain of unknown function (DUF4167)
HTH_36               PF13730.1     55 sp|P42199|TCYA_BACSU -            268       0.1   12.7   0.0   2   2   0.00018      0.46   10.6   0.0     9    53   201   252   197   254 0.78 Helix-turn-helix domain
FKBP_C               PF00254.23    94 sp|P42199|TCYA_BACSU -            268      0.36   10.8   5.0   2   2   0.00014      0.35   10.9   0.6    25    60   218   253   185   257 0.76 FKBP-type peptidyl-prolyl cis-trans isomerase
BPD_transp_1         PF00528.17   185 sp|P42200|TCYB_BACSU -            234   8.1e-26   90.6  12.1   2   2   1.6e-29   8.1e-26   90.6  12.1     1   184    46   229    42   230 0.95 Binding-protein-dependent transport system inner membrane component
DUF1129              PF06570.6    206 sp|P42200|TCYB_BACSU -            234      0.15   11.3   9.0   1   2   2.5e-05      0.12   11.6   3.8   114   189    36   109    28   117 0.75 Protein of unknown function (DUF1129)
Colicin_V            PF02674.11   146 sp|P42200|TCYB_BACSU -            234      0.29   10.9   9.4   1   2   6.5e-05      0.32   10.8   4.3    60   126    28    94    15   124 0.89 Colicin V production protein
ABC_tran             PF00005.22   137 sp|P39456|TCYC_BACSU -            247   1.9e-34  118.9   0.0   1   1   5.8e-37   2.4e-34  118.5   0.0     1   137    17   169    17   169 0.88 ABC transporter
AAA_21               PF13304.1    303 sp|P39456|TCYC_BACSU -            247   4.1e-15   56.5   0.0   1   2   1.1e-06   0.00047   20.2   0.1     2    52    30    69    29    88 0.80 AAA domain
AAA_21               PF13304.1    303 sp|P39456|TCYC_BACSU -            247   4.1e-15   56.5   0.0   2   2   7.3e-11     3e-08   33.9   0.0   220   298   124   199    98   202 0.86 AAA domain
SMC_N                PF02463.14   220 sp|P39456|TCYC_BACSU -            247   5.8e-09   35.4   0.3   1   2    0.0012      0.49    9.5   0.0    17    43    19    46     2    55 0.72 RecF/RecN/SMC N terminal domain
SMC_N                PF02463.14   220 sp|P39456|TCYC_BACSU -            247   5.8e-09   35.4   0.3   2   2   3.4e-08   1.4e-05   24.4   0.0   114   207   113   209    59   216 0.80 RecF/RecN/SMC N terminal domain
AAA_15               PF13175.1    415 sp|P39456|TCYC_BACSU -            247   7.5e-06   25.2   0.1   1   2   9.6e-05      0.04   12.9   0.3    17    43    21    57     5   137 0.72 AAA ATPase domain
AAA_15               PF13175.1    415 sp|P39456|TCYC_BACSU -            247   7.5e-06   25.2   0.1   2   2   0.00047      0.19   10.7   0.0   372   413   161   201   111   203 0.87 AAA ATPase domain
AAA_18               PF13238.1    129 sp|P39456|TCYC_BACSU -            247   2.2e-05   24.7   0.0   1   2   5.7e-06    0.0023   18.2   0.1     1    41    30    88    30   132 0.60 AAA domain
AAA_29               PF13555.1     62 sp|P39456|TCYC_BACSU -            247   3.4e-05   23.2   0.0   1   1   1.6e-07   6.4e-05   22.3   0.0    16    55    21    60    15    64 0.83 P-loop containing region of AAA domain
AAA_23               PF13476.1    202 sp|P39456|TCYC_BACSU -            247   5.6e-05   23.5   1.2   1   1   3.1e-07   0.00013   22.4   1.2    13    45    18    53     2   169 0.59 AAA domain
Arch_ATPase          PF01637.13   234 sp|P39456|TCYC_BACSU -            247   8.2e-05   22.4   0.2   1   1   1.2e-06    0.0005   19.8   0.1     8    68    17    74    13   137 0.71 Archaeal ATPase
AAA_16               PF13191.1    185 sp|P39456|TCYC_BACSU -            247   0.00013   21.9   0.5   1   1   1.1e-06   0.00045   20.2   0.5    23   131    26   177    15   212 0.51 AAA ATPase domain
AAA_22               PF13401.1    131 sp|P39456|TCYC_BACSU -            247   0.00014   21.9   0.1   1   1   2.5e-06     0.001   19.2   0.1     3    37    26    81    22   205 0.51 AAA domain
ABC_ATPase           PF09818.4    448 sp|P39456|TCYC_BACSU -            247   0.00023   19.8   0.1   1   2   0.00026      0.11   11.0   0.0   240   265    22    48    13    51 0.91 Predicted ATPase of the ABC class
AAA_17               PF13207.1    121 sp|P39456|TCYC_BACSU -            247   0.00041   21.1   0.4   1   1   4.1e-06    0.0017   19.1   0.4     1    26    29    53    29   245 0.82 AAA domain
DUF258               PF03193.11   161 sp|P39456|TCYC_BACSU -            247   0.00043   19.5   0.0   1   1   1.5e-06   0.00063   18.9   0.0    19    57    10    49     2    90 0.86 Protein of unknown function, DUF258
AAA_10               PF12846.2    304 sp|P39456|TCYC_BACSU -            247   0.00046   19.7   0.0   1   2   1.7e-05    0.0071   15.8   0.0     4    25    30    52    27   128 0.78 AAA-like domain
AAA_13               PF13166.1    712 sp|P39456|TCYC_BACSU -            247   0.00053   18.5   0.0   2   2   0.00061      0.25    9.7   0.0   530   579   161   208   153   211 0.86 AAA domain
AAA_28               PF13521.1    163 sp|P39456|TCYC_BACSU -            247     0.001   19.0   0.1   1   1   1.3e-05    0.0053   16.7   0.0     2    25    30    53    29   127 0.85 AAA domain
AAA_14               PF13173.1    128 sp|P39456|TCYC_BACSU -            247    0.0028   17.5   0.0   1   1     2e-05    0.0083   16.0   0.0     2    47    27    70    26   142 0.78 AAA domain
UPF0079              PF02367.12   123 sp|P39456|TCYC_BACSU -            247    0.0043   16.6   0.0   1   1     2e-05    0.0082   15.7   0.0     6    36    18    48    13    79 0.88 Uncharacterised P-loop hydrolase UPF0079
AAA_19               PF13245.1     76 sp|P39456|TCYC_BACSU -            247    0.0045   16.7   0.0   1   1   3.3e-05     0.014   15.1   0.0     9    34    26    50    19    73 0.85 Part of AAA domain
MobB                 PF03205.9    140 sp|P39456|TCYC_BACSU -            247    0.0059   16.3   0.0   1   1   5.7e-05     0.024   14.3   0.0     1    20    28    47    28    90 0.92 Molybdopterin guanine dinucleotide synthesis protein B
AAA_25               PF13481.1    194 sp|P39456|TCYC_BACSU -            247    0.0065   15.8   0.1   1   2   0.00019     0.078   12.3   0.0    30    50    24    44     2    52 0.83 AAA domain
T2SE                 PF00437.15   272 sp|P39456|TCYC_BACSU -            247     0.011   14.6   0.0   1   1   5.2e-05     0.021   13.7   0.0   115   148    14    47     3    58 0.81 Type II/IV secretion system protein
NACHT                PF05729.7    166 sp|P39456|TCYC_BACSU -            247     0.013   15.2   0.0   1   1   5.9e-05     0.024   14.2   0.0     2    20    29    47    28    63 0.91 NACHT domain
NB-ARC               PF00931.17   287 sp|P39456|TCYC_BACSU -            247     0.014   14.2   0.0   1   1   4.4e-05     0.018   13.9   0.0     7    39    15    47    13   123 0.83 NB-ARC domain
AAA_33               PF13671.1    143 sp|P39456|TCYC_BACSU -            247     0.016   15.1   0.0   1   1   0.00012     0.051   13.4   0.0     1    19    29    47    29    60 0.88 AAA domain
PduV-EutP            PF10662.4    143 sp|P39456|TCYC_BACSU -            247     0.019   14.4   0.0   1   1   9.6e-05     0.039   13.4   0.0     3    26    29    52    27    66 0.88 Ethanolamine utilisation - propanediol utilisation
SbcCD_C              PF13558.1     90 sp|P39456|TCYC_BACSU -            247     0.026   14.4   0.1   1   1   0.00031      0.13   12.2   0.1    61    89   156   184   138   185 0.79 Putative exonuclease SbcCD, C subunit
PRK                  PF00485.13   194 sp|P39456|TCYC_BACSU -            247     0.037   13.6   0.0   1   1   0.00033      0.14   11.7   0.0     1    21    29    49    29   113 0.77 Phosphoribulokinase / Uridine kinase family
cobW                 PF02492.14   178 sp|P39456|TCYC_BACSU -            247     0.049   13.0   0.0   1   1   0.00024     0.098   12.0   0.0     2    20    29    47    28    61 0.85 CobW/HypB/UreG, nucleotide-binding domain
AAA_24               PF13479.1    213 sp|P39456|TCYC_BACSU -            247     0.057   12.9   0.0   1   1   0.00027      0.11   12.0   0.0     6    21    30    45    25    53 0.85 AAA domain
AAA_30               PF13604.1    196 sp|P39456|TCYC_BACSU -            247     0.078   12.5   0.0   1   1   0.00072       0.3   10.6   0.0    17    40    26    49    20    56 0.82 AAA domain
RecA                 PF00154.16   323 sp|P39456|TCYC_BACSU -            247     0.085   11.8   0.0   1   1    0.0004      0.17   10.9   0.0    51    71    25    45    19    79 0.80 recA bacterial DNA recombination protein
DLIC                 PF05783.6    472 sp|P39456|TCYC_BACSU -            247     0.089   11.4   0.1   1   1   0.00049       0.2   10.2   0.0    13    55    15    57     9    76 0.86 Dynein light intermediate chain (DLIC)
IstB_IS21            PF01695.12   178 sp|P39456|TCYC_BACSU -            247      0.11   11.8   0.3   1   1   0.00084      0.35   10.2   0.1    44    64    24    44    13    60 0.86 IstB-like ATP binding protein
Mg_chelatase         PF01078.16   207 sp|P39456|TCYC_BACSU -            247      0.12   11.4   0.0   1   1   0.00043      0.18   10.9   0.0    22    52    27    57     7   126 0.74 Magnesium chelatase, subunit ChlI
FtsK_SpoIIIE         PF01580.13   205 sp|P39456|TCYC_BACSU -            247      0.12   11.7   0.1   1   1   0.00056      0.23   10.9   0.1    25    58    14    47     5    50 0.79 FtsK/SpoIIIE family
SBP_bac_3            PF00497.15   225 sp|O34406|TCYJ_BACSU -            269   6.4e-49  166.2   0.9   1   1   2.5e-52   7.4e-49  166.0   0.9     1   224    35   259    35   260 0.93 Bacterial extracellular solute-binding proteins, family 3
NMT1                 PF09084.6    216 sp|O34406|TCYJ_BACSU -            269   1.1e-05   25.1   0.1   2   2   1.8e-08   5.4e-05   22.8   0.1    73   147   121   195   116   233 0.86 NMT1/THI5 like
Phosphonate-bd       PF12974.2    243 sp|O34406|TCYJ_BACSU -            269   0.00056   19.3   0.1   1   1     1e-06    0.0031   16.9   0.1    19   162    62   193    60   244 0.73 ABC transporter, phosphonate, periplasmic substrate-binding protein
DUF3647              PF12363.3    113 sp|O34406|TCYJ_BACSU -            269     0.022   14.8   0.9   2   2   1.7e-05      0.05   13.6   0.1    19   112   158   258   142   259 0.87 Phage protein
SBP_bac_3            PF00497.15   225 sp|O34852|TCYK_BACSU -            270   2.3e-46  157.8   0.3   1   1     7e-50   2.6e-46  157.6   0.3     1   225    38   263    38   263 0.90 Bacterial extracellular solute-binding proteins, family 3
NMT1                 PF09084.6    216 sp|O34852|TCYK_BACSU -            270   1.1e-06   28.3   0.1   1   1   8.5e-10   3.1e-06   26.9   0.0    70   146   121   197   118   216 0.86 NMT1/THI5 like
DUF3647              PF12363.3    113 sp|O34852|TCYK_BACSU -            270    0.0076   16.3   1.0   2   2   9.4e-06     0.035   14.2   0.2    32   112   174   261   154   262 0.84 Phage protein
DUF2969              PF11184.3     71 sp|O34852|TCYK_BACSU -            270     0.016   15.2   0.9   2   2   1.7e-05     0.061   13.4   0.3    26    67   210   250   200   254 0.81 Protein of unknown function (DUF2969)
BPD_transp_1         PF00528.17   185 sp|O34315|TCYL_BACSU -            239   4.5e-20   71.9   8.6   1   1   4.6e-24   6.9e-20   71.3   8.6     1   185    35   225    35   225 0.94 Binding-protein-dependent transport system inner membrane component
BPD_transp_1         PF00528.17   185 sp|O34931|TCYM_BACSU -            235   2.1e-16   59.9  17.8   2   2   1.4e-20   2.1e-16   59.9  17.8    18   183    53   227    30   229 0.85 Binding-protein-dependent transport system inner membrane component
ABC_tran             PF00005.22   137 sp|O34900|TCYN_BACSU -            259   6.8e-35  120.3   0.0   1   1   1.9e-37   9.8e-35  119.8   0.0     1   137    17   168    17   168 0.89 ABC transporter
AAA_21               PF13304.1    303 sp|O34900|TCYN_BACSU -            259   1.3e-17   64.7   0.0   1   2   3.8e-07   0.00019   21.4   0.0     4    42    32    63    29    79 0.72 AAA domain
AAA_21               PF13304.1    303 sp|O34900|TCYN_BACSU -            259   1.3e-17   64.7   0.0   2   2   3.5e-13   1.8e-10   41.2   0.0   227   298   130   198    92   202 0.88 AAA domain
SMC_N                PF02463.14   220 sp|O34900|TCYN_BACSU -            259     1e-09   37.9   0.1   1   1   4.9e-12   2.5e-09   36.7   0.1    25   208    28   208    17   218 0.75 RecF/RecN/SMC N terminal domain
AAA_16               PF13191.1    185 sp|O34900|TCYN_BACSU -            259   3.9e-06   26.9   0.0   1   1   1.9e-08   9.7e-06   25.6   0.0    22   166    25   206    12   213 0.65 AAA ATPase domain
AAA_15               PF13175.1    415 sp|O34900|TCYN_BACSU -            259   1.7e-05   24.0   0.0   1   2    0.0016      0.84    8.6   0.1    22    43    24    62     2    84 0.63 AAA ATPase domain
AAA_15               PF13175.1    415 sp|O34900|TCYN_BACSU -            259   1.7e-05   24.0   0.0   2   2   5.9e-05      0.03   13.3   0.0   371   412   157   199   118   202 0.82 AAA ATPase domain
AAA_22               PF13401.1    131 sp|O34900|TCYN_BACSU -            259   3.7e-05   23.8   0.0   1   1   2.8e-07   0.00014   21.9   0.0     4    68    27    92    24   205 0.69 AAA domain
AAA_10               PF12846.2    304 sp|O34900|TCYN_BACSU -            259   0.00017   21.1   0.0   1   2   0.00014     0.072   12.5   0.0     5    23    31    50    28    64 0.81 AAA-like domain
T2SE                 PF00437.15   272 sp|O34900|TCYN_BACSU -            259   0.00026   19.9   0.0   1   1   8.8e-07   0.00045   19.2   0.0   118   178    17    77     6   114 0.81 Type II/IV secretion system protein
AAA_23               PF13476.1    202 sp|O34900|TCYN_BACSU -            259   0.00038   20.8   0.5   1   1   1.7e-06   0.00085   19.7   0.5    13    41    17    49     2   163 0.84 AAA domain
AAA_29               PF13555.1     62 sp|O34900|TCYN_BACSU -            259   0.00054   19.4   0.0   1   1     2e-06     0.001   18.5   0.0    19    41    24    45    15    57 0.80 P-loop containing region of AAA domain
AAA_33               PF13671.1    143 sp|O34900|TCYN_BACSU -            259    0.0021   17.9   0.2   1   1   8.5e-06    0.0043   16.9   0.0     1    19    29    47    29   167 0.74 AAA domain
AAA_17               PF13207.1    121 sp|O34900|TCYN_BACSU -            259    0.0035   18.1   1.1   1   1   1.4e-05    0.0069   17.1   1.1     1    17    29    45    29   241 0.90 AAA domain
AAA_25               PF13481.1    194 sp|O34900|TCYN_BACSU -            259    0.0041   16.5   0.2   1   2   7.7e-05     0.039   13.3   0.1    30    50    24    44    11    49 0.83 AAA domain
UPF0079              PF02367.12   123 sp|O34900|TCYN_BACSU -            259    0.0046   16.5   0.0   1   1   2.1e-05     0.011   15.3   0.0    11    35    23    47    14    60 0.87 Uncharacterised P-loop hydrolase UPF0079
MobB                 PF03205.9    140 sp|O34900|TCYN_BACSU -            259    0.0067   16.1   0.1   1   1   2.8e-05     0.014   15.0   0.0     2    27    29    52    28   114 0.80 Molybdopterin guanine dinucleotide synthesis protein B
DEAD                 PF00270.24   169 sp|O34900|TCYN_BACSU -            259    0.0079   15.6   0.0   1   1     3e-05     0.015   14.7   0.0     8   116    20   237    17   243 0.84 DEAD/DEAH box helicase
AAA_18               PF13238.1    129 sp|O34900|TCYN_BACSU -            259     0.013   15.8   0.0   1   1   5.9e-05      0.03   14.6   0.0     1    23    30    54    30   125 0.71 AAA domain
SbcCD_C              PF13558.1     90 sp|O34900|TCYN_BACSU -            259     0.014   15.2   0.4   1   1   0.00043      0.22   11.4   0.2    14    88   119   182   108   184 0.71 Putative exonuclease SbcCD, C subunit
AAA_30               PF13604.1    196 sp|O34900|TCYN_BACSU -            259     0.015   14.8   0.2   1   2   0.00024      0.12   11.8   0.0    14    39    23    48    19    85 0.84 AAA domain
DUF258               PF03193.11   161 sp|O34900|TCYN_BACSU -            259     0.024   13.8   0.0   1   1   7.1e-05     0.036   13.2   0.0    29    59    20    51     2    87 0.80 Protein of unknown function, DUF258
NACHT                PF05729.7    166 sp|O34900|TCYN_BACSU -            259     0.027   14.1   0.0   1   1   9.3e-05     0.048   13.3   0.0     2    20    29    47    28    52 0.89 NACHT domain
AAA_19               PF13245.1     76 sp|O34900|TCYN_BACSU -            259     0.028   14.1   0.1   1   1   0.00039       0.2   11.4   0.0    10    29    27    46    20    57 0.75 Part of AAA domain
AAA_14               PF13173.1    128 sp|O34900|TCYN_BACSU -            259     0.056   13.3   0.0   1   1   0.00029      0.15   11.9   0.0     2    33    27    58    26   102 0.76 AAA domain
Miro                 PF08477.8    119 sp|O34900|TCYN_BACSU -            259     0.073   13.5   0.0   1   1   0.00025      0.13   12.7   0.0     2    39    30    70    29   119 0.69 Miro-like protein
AAA_24               PF13479.1    213 sp|O34900|TCYN_BACSU -            259      0.11   12.0   0.0   1   1   0.00044      0.22   11.0   0.0     6    22    30    46    25    62 0.86 AAA domain
Rad17                PF03215.10   519 sp|O34900|TCYN_BACSU -            259      0.12   10.9   0.0   1   1   0.00039       0.2   10.2   0.0    30    65    12    47     4    57 0.88 Rad17 cell cycle checkpoint protein
SDF                  PF00375.13   390 sp|P54596|TCYP_BACSU -            463     8e-94  314.5  39.6   2   2   1.1e-97     8e-94  314.5  39.6     2   389    31   441    30   442 0.96 Sodium:dicarboxylate symporter family
ADH_N                PF08240.7    109 sp|O31776|TDH_BACSU  -            347   4.7e-33  113.1   4.0   1   1   6.1e-36   7.5e-33  112.5   4.0     2   107    31   138    30   140 0.97 Alcohol dehydrogenase GroES-like domain
ADH_zinc_N           PF00107.21   130 sp|O31776|TDH_BACSU  -            347   2.1e-29  101.7   0.1   1   1   2.7e-32   3.4e-29  101.0   0.1     1   127   179   307   179   310 0.92 Zinc-binding dehydrogenase
ADH_zinc_N_2         PF13602.1    127 sp|O31776|TDH_BACSU  -            347   8.8e-06   26.6   0.0   1   1   1.6e-08     2e-05   25.4   0.0    14   127   226   345   212   345 0.68 Zinc-binding dehydrogenase
Methyltransf_18      PF12847.2    112 sp|O31776|TDH_BACSU  -            347   0.00065   20.2   0.1   1   1   9.4e-07    0.0012   19.4   0.1     7    45   174   213   168   277 0.78 Methyltransferase domain
Methyltransf_11      PF08241.7     95 sp|O31776|TDH_BACSU  -            347    0.0018   18.7   0.0   1   1   3.6e-06    0.0044   17.4   0.0     3    50   175   224   173   241 0.88 Methyltransferase domain
AlaDh_PNT_C          PF01262.16   168 sp|O31776|TDH_BACSU  -            347    0.0067   16.0   0.2   1   1     1e-05     0.012   15.1   0.2    21    69   170   219   156   228 0.84 Alanine dehydrogenase/PNT, C-terminal domain
HI0933_like          PF03486.9    409 sp|O31776|TDH_BACSU  -            347     0.013   13.9   0.5   1   1   1.5e-05     0.018   13.4   0.5     3    34   172   204   170   235 0.82 HI0933-like protein
2-Hacid_dh_C         PF02826.14   178 sp|O31776|TDH_BACSU  -            347     0.016   14.3   0.0   1   1   2.3e-05     0.028   13.5   0.0    30    80   163   214   144   224 0.82 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain
TrkA_N               PF02254.13   116 sp|O31776|TDH_BACSU  -            347     0.021   14.8   0.0   1   1     3e-05     0.037   14.0   0.0     2    43   173   215   172   228 0.86 TrkA-N domain
MTS                  PF05175.9    170 sp|O31776|TDH_BACSU  -            347      0.07   12.4   0.1   1   1   9.7e-05      0.12   11.7   0.1    30    74   166   212   157   227 0.85 Methyltransferase small domain
Methyltransf_25      PF13649.1    101 sp|O31776|TDH_BACSU  -            347     0.083   13.2   0.0   1   1   0.00023      0.29   11.5   0.0     4    71   175   241   173   265 0.73 Methyltransferase domain
Pyr_redox_3          PF13738.1    203 sp|O31776|TDH_BACSU  -            347      0.11   12.4   0.3   1   1   0.00018      0.22   11.5   0.3     1    30   173   202   173   220 0.94 Pyridine nucleotide-disulphide oxidoreductase
TENA_THI-4           PF03070.11   210 sp|P25052|TENA_BACSU -            236   4.8e-59  199.6   2.2   1   1   7.4e-63   5.5e-59  199.4   2.2     3   209    10   214     8   215 0.98 TENA/THI-4/PQQC family
TPR_MLP1_2           PF07926.7    132 sp|P25052|TENA_BACSU -            236     0.014   15.1   0.4   1   2   6.3e-06     0.047   13.4   0.0    26    67    58    99    44   108 0.84 TPR/MLP1/MLP2-like protein
TMP-TENI             PF02581.12   180 sp|P25053|TENI_BACSU -            205   3.5e-38  130.5   0.1   1   1   8.4e-42   4.2e-38  130.2   0.1     2   180     4   179     3   179 0.92 Thiamine monophosphate synthase/TENI
His_biosynth         PF00977.16   229 sp|P25053|TENI_BACSU -            205    0.0043   16.3   0.1   1   1   1.8e-06    0.0089   15.3   0.1   175   221   132   177    96   184 0.76 Histidine biosynthesis protein
NMO                  PF03060.10   330 sp|P25053|TENI_BACSU -            205    0.0087   15.2   0.0   1   1   1.9e-06    0.0094   15.1   0.0   142   218   100   175     8   191 0.70 Nitronate monooxygenase
CLP_protease         PF00574.18   182 sp|Q99171|TEPA_BACSU -            245   1.1e-31  109.8   0.1   1   1     4e-35   1.5e-31  109.5   0.1     5   177    44   218    38   222 0.94 Clp protease
Peptidase_S49        PF01343.13   154 sp|Q99171|TEPA_BACSU -            245   0.00058   19.6   1.2   2   2   2.3e-06    0.0086   15.8   0.1    91   150   164   232   160   235 0.80 Peptidase family S49
ECH                  PF00378.15   245 sp|Q99171|TEPA_BACSU -            245    0.0021   17.2   0.2   1   2   2.3e-06    0.0085   15.2   0.1    81   130   102   151    96   168 0.84 Enoyl-CoA hydratase/isomerase family
Arginase             PF00491.16   278 sp|Q99171|TEPA_BACSU -            245       0.1   11.9   0.6   1   1   6.2e-05      0.23   10.7   0.6    75    97   108   130     4   143 0.58 Arginase family
TGT                  PF01702.13   238 sp|O32053|TGT_BACSU  -            381  9.8e-107  355.6   0.0   1   1  8.1e-111  1.2e-106  355.3   0.0     1   237   132   368   132   369 0.99 Queuine tRNA-ribosyltransferase
ThiC                 PF01964.13   421 sp|P45740|THIC_BACSU -            590  6.7e-207  687.0   0.0   1   1  1.1e-210    8e-207  686.8   0.0     1   420   133   555   133   556 0.99 ThiC family
ThiC-associated      PF13667.1     80 sp|P45740|THIC_BACSU -            590   1.8e-35  120.3   0.1   1   1   6.4e-39   4.8e-35  118.9   0.1     2    80    16    94    15    94 0.98 ThiC-associated domain
Phos_pyr_kin         PF08543.7    246 sp|O31620|THID_BACSU -            271   9.9e-97  322.9   1.2   1   1    3e-100   1.1e-96  322.7   1.2     1   246    13   258    13   258 0.98 Phosphomethylpyrimidine kinase
PfkB                 PF00294.19   301 sp|O31620|THID_BACSU -            271   5.5e-15   55.2   0.1   1   1     2e-18   7.3e-15   54.8   0.1   139   292    83   247    56   254 0.86 pfkB family carbohydrate kinase
CbiX                 PF01903.12   105 sp|O31620|THID_BACSU -            271   0.00011   22.2   0.2   1   2   2.3e-07   0.00085   19.4   0.0     7    65    55   113    50   116 0.91 CbiX
Carb_kinase          PF01256.12   242 sp|O31620|THID_BACSU -            271    0.0078   15.5   0.3   1   1     4e-06     0.015   14.6   0.2   116   162   132   178     6   180 0.75 Carbohydrate kinase
TMP-TENI             PF02581.12   180 sp|P39594|THIE_BACSU -            222   1.7e-61  206.5   2.1   1   1   6.6e-65     2e-61  206.2   2.1     1   180    15   198    15   198 0.97 Thiamine monophosphate synthase/TENI
ThiG                 PF05690.9    247 sp|P39594|THIE_BACSU -            222   5.3e-05   22.4   0.2   2   2   1.8e-08   5.3e-05   22.4   0.2   166   226   157   217   147   222 0.81 Thiazole biosynthesis protein ThiG
QRPTase_C            PF01729.14   169 sp|P39594|THIE_BACSU -            222     0.016   14.7   0.1   1   1   8.3e-06     0.025   14.1   0.1    63   161    95   201    60   204 0.80 Quinolinate phosphoribosyl transferase, C-terminal domain
DUF561               PF04481.7    243 sp|P39594|THIE_BACSU -            222     0.018   14.0   1.8   3   3   0.00011      0.34    9.8   0.6   183   227   164   208   141   220 0.82 Protein of unknown function (DUF561)
Ribul_P_3_epim       PF00834.14   201 sp|P39594|THIE_BACSU -            222      0.51    9.4   2.8   3   3   0.00012      0.36    9.8   0.3   160   200   161   201   149   202 0.82 Ribulose-phosphate 3 epimerase family
ThiF                 PF00899.16   136 sp|O31619|THIF_BACSU -            336   6.4e-42  142.6   0.5   1   1   1.1e-44     1e-41  141.9   0.5     1   134    23   158    23   160 0.96 ThiF family
MoeZ_MoeB            PF05237.8     84 sp|O31619|THIF_BACSU -            336   1.8e-21   75.4   0.2   1   1   3.7e-24   3.4e-21   74.6   0.2     2    83   163   244   162   245 0.92 MoeZ/MoeB domain
Shikimate_DH         PF01488.15   135 sp|O31619|THIF_BACSU -            336   6.9e-06   26.2   0.1   1   1   1.3e-08   1.2e-05   25.4   0.1     8    56    20    68    16   135 0.80 Shikimate / quinate 5-dehydrogenase
3HCDH_N              PF02737.13   180 sp|O31619|THIF_BACSU -            336   0.00063   19.4   0.7   1   1   1.1e-06     0.001   18.7   0.7     2    89    27   113    26   125 0.77 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain
AlaDh_PNT_C          PF01262.16   168 sp|O31619|THIF_BACSU -            336    0.0019   17.8   0.1   1   1   3.3e-06     0.003   17.1   0.1    12   107    16   121     5   134 0.79 Alanine dehydrogenase/PNT, C-terminal domain
NAD_binding_7        PF13241.1    103 sp|O31619|THIF_BACSU -            336     0.015   15.5   0.6   1   1   3.7e-05     0.035   14.3   0.3     4    95    21   128    20   144 0.64 Putative NAD(P)-binding
adh_short            PF00106.20   167 sp|O31619|THIF_BACSU -            336     0.031   14.1   1.1   1   2   0.00032       0.3   10.9   0.2     4    48    28    90    25   140 0.70 short chain dehydrogenase
Malic_M              PF03949.10   255 sp|O31619|THIF_BACSU -            336     0.035   13.6   0.0   1   1   5.8e-05     0.053   13.0   0.0    20    53    19    48    16   120 0.82 Malic enzyme, NAD binding domain
NAD_Gly3P_dh_N       PF01210.18   157 sp|O31619|THIF_BACSU -            336     0.036   13.8   0.0   1   1   6.6e-05     0.061   13.0   0.0     3    72    28    98    26   133 0.80 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus
ApbA                 PF02558.11   151 sp|O31619|THIF_BACSU -            336     0.037   13.4   0.0   1   1   7.5e-05      0.07   12.5   0.0     2    58    28    85    27   100 0.69 Ketopantoate reductase PanE/ApbA
DAO                  PF01266.19   358 sp|O31619|THIF_BACSU -            336      0.04   12.8   0.6   1   1   4.9e-05     0.045   12.6   0.6     2    38    27    62    26   292 0.86 FAD dependent oxidoreductase
FAD_binding_3        PF01494.14   356 sp|O31619|THIF_BACSU -            336     0.072   12.1   0.0   1   1   0.00011      0.11   11.5   0.0     3    30    26    53    24    90 0.89 FAD binding domain
DUF2072              PF09845.4    131 sp|O31619|THIF_BACSU -            336     0.085   12.7   0.0   1   1   0.00022      0.21   11.5   0.0    20    60   236   276   225   295 0.68 Zn-ribbon containing protein (DUF2072)
F420_oxidored        PF03807.12    96 sp|O31619|THIF_BACSU -            336      0.13   12.7   0.6   1   1   0.00061      0.57   10.6   0.4     3    43    28    65    26   124 0.80 NADP oxidoreductase coenzyme F420-dependent
Saccharop_dh         PF03435.13   386 sp|O31619|THIF_BACSU -            336      0.18   10.7   0.8   1   1   0.00038      0.35    9.7   0.8     2    92    28   142    27   156 0.74 Saccharopine dehydrogenase
NAD_binding_8        PF13450.1     68 sp|O31619|THIF_BACSU -            336      0.18   11.8   0.7   1   1   0.00046      0.43   10.6   0.7     1    27    29    56    29    58 0.93 NAD(P)-binding Rossmann-like domain
ThiG                 PF05690.9    247 sp|O31618|THIG_BACSU -            256  9.5e-110  365.4   0.1   1   1  5.1e-113  1.1e-109  365.3   0.1     2   247     6   250     5   250 0.99 Thiazole biosynthesis protein ThiG
His_biosynth         PF00977.16   229 sp|O31618|THIG_BACSU -            256   0.00019   20.7   0.0   1   1   1.5e-07   0.00031   20.0   0.0    67   106   172   211   131   226 0.87 Histidine biosynthesis protein
FMN_dh               PF01070.13   357 sp|O31618|THIG_BACSU -            256    0.0019   17.0   0.1   1   1   1.4e-06     0.003   16.4   0.1   278   308   176   206   154   213 0.83 FMN-dependent dehydrogenase
IMPDH                PF00478.20   352 sp|O31618|THIG_BACSU -            256    0.0043   15.9   0.1   1   1   3.4e-06    0.0072   15.2   0.1   207   247   174   214   167   221 0.90 IMP dehydrogenase / GMP reductase domain
NanE                 PF04131.9    192 sp|O31618|THIG_BACSU -            256     0.014   14.3   0.1   2   2   2.5e-05     0.052   12.5   0.0   140   177   174   211   162   224 0.88 Putative N-acetylmannosamine-6-phosphate epimerase
DUF561               PF04481.7    243 sp|O31618|THIG_BACSU -            256     0.026   13.4   0.3   2   2   6.8e-05      0.14   11.0   0.1   181   230   173   223   127   231 0.77 Protein of unknown function (DUF561)
Dus                  PF01207.12   310 sp|O31618|THIG_BACSU -            256      0.23   10.2   0.3   2   2   0.00021      0.45    9.2   0.0   176   215   171   209   135   230 0.85 Dihydrouridine synthase (Dus)
ThiI                 PF02568.9    197 sp|O34595|THII_BACSU -            401   1.5e-63  213.8   0.0   1   1   5.5e-67     2e-63  213.4   0.0     2   196   176   370   175   371 0.98 Thiamine biosynthesis protein (ThiI)
THUMP                PF02926.12   144 sp|O34595|THII_BACSU -            401   5.6e-28   97.6   0.0   1   1     3e-31   1.1e-27   96.6   0.0     2   143    30   164    29   165 0.95 THUMP domain
QueC                 PF06508.8    210 sp|O34595|THII_BACSU -            401   5.8e-07   28.9   0.0   1   1   3.6e-08   0.00013   21.2   0.0     1   177   179   334   179   350 0.65 Queuosine biosynthesis protein QueC
UPF0227              PF05728.7    187 sp|O34595|THII_BACSU -            401     0.027   14.1   0.0   1   1   1.5e-05     0.057   13.1   0.0    35    99   257   321   240   344 0.75 Uncharacterised protein family (UPF0227)
AIRS                 PF00586.19    96 sp|O05514|THIL_BACSU -            325   7.5e-23   80.6   0.0   1   1   2.2e-26   1.7e-22   79.4   0.0     1    96    25   122    25   122 0.96 AIR synthase related protein, N-terminal domain
AIRS_C               PF02769.17   153 sp|O05514|THIL_BACSU -            325   3.9e-07   30.2   0.0   2   2   1.1e-10   8.5e-07   29.0   0.0     1   152   151   307   151   308 0.69 AIR synthase related protein, C-terminal domain
HK                   PF02110.10   246 sp|P39593|THIM_BACSU -            272  4.8e-102  340.3   7.1   1   1  1.5e-105  5.5e-102  340.1   7.1     1   245    10   257    10   258 0.98 Hydroxyethylthiazole kinase family
Carb_kinase          PF01256.12   242 sp|P39593|THIM_BACSU -            272   1.2e-08   34.5   3.6   1   1   5.3e-12     2e-08   33.8   3.6   138   227   147   236     9   247 0.91 Carbohydrate kinase
Phos_pyr_kin         PF08543.7    246 sp|P39593|THIM_BACSU -            272    0.0008   18.6   1.9   1   1   5.8e-07    0.0022   17.2   1.9    63   224    63   221    23   244 0.69 Phosphomethylpyrimidine kinase
TPP_enzyme_C         PF02775.16   153 sp|P39593|THIM_BACSU -            272    0.0011   18.6   0.9   1   3   2.4e-06     0.009   15.5   0.1    65   152     9    94     3    94 0.86 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain
TPK_catalytic        PF04263.11   123 sp|O34664|THIN_BACSU -            214   1.2e-31  108.8   0.0   1   1   3.4e-35   1.7e-31  108.3   0.0    12   122    21   131    11   132 0.92 Thiamin pyrophosphokinase, catalytic domain
TPK_B1_binding       PF04265.9     68 sp|O34664|THIN_BACSU -            214   3.6e-18   65.0   0.0   1   1   1.2e-21   5.8e-18   64.3   0.0     1    68   142   208   142   208 0.98 Thiamin pyrophosphokinase, vitamin B1 binding domain
Aldo_ket_red         PF00248.16   283 sp|O34664|THIN_BACSU -            214     0.086   11.6   0.0   1   1   2.2e-05      0.11   11.2   0.0   207   266    56   117    32   134 0.81 Aldo/keto reductase family
Thioredoxin          PF00085.15   104 sp|P14949|THIO_BACSU -            104     5e-31  106.4   0.0   1   1   5.5e-34   5.4e-31  106.3   0.0     3   104     4   103     2   103 0.96 Thioredoxin
Thioredoxin_8        PF13905.1     95 sp|P14949|THIO_BACSU -            104   1.9e-12   47.1   0.0   1   2   1.2e-12   1.2e-09   38.1   0.0     3    53    19    67    17    67 0.94 Thioredoxin-like
Thioredoxin_2        PF13098.1    112 sp|P14949|THIO_BACSU -            104   2.3e-11   43.8   0.0   1   1   9.2e-14   9.1e-11   41.9   0.0     5   111    17    99    12   100 0.90 Thioredoxin-like domain
Thioredoxin_3        PF13192.1     76 sp|P14949|THIO_BACSU -            104   2.5e-07   30.3   0.0   1   1   3.3e-10   3.3e-07   30.0   0.0     9    74    28    99    24   101 0.79 Thioredoxin domain
Thioredoxin_9        PF14595.1    129 sp|P14949|THIO_BACSU -            104     3e-06   26.8   0.0   1   1   3.4e-09   3.4e-06   26.6   0.0    48   122    24    96     2   103 0.73 Thioredoxin
Redoxin              PF08534.5    146 sp|P14949|THIO_BACSU -            104   1.4e-05   24.6   0.0   1   2   5.4e-06    0.0054   16.2   0.0    22    61    10    49     3    55 0.81 Redoxin
HyaE                 PF07449.6    107 sp|P14949|THIO_BACSU -            104   6.6e-05   22.7   0.0   1   1   7.7e-08   7.6e-05   22.5   0.0    47    95    36    84     6    92 0.91 Hydrogenase-1 expression protein HyaE
AhpC-TSA             PF00578.16   124 sp|P14949|THIO_BACSU -            104   0.00014   21.5   0.0   1   2   1.9e-05     0.019   14.6   0.0    16    68     9    58     2    59 0.80 AhpC/TSA family
DUF836               PF05768.9     81 sp|P14949|THIO_BACSU -            104    0.0002   21.5   0.0   1   1   2.5e-07   0.00025   21.2   0.0     8    55    27    77    24   103 0.79 Glutaredoxin-like domain (DUF836)
Thioredoxin_7        PF13899.1     82 sp|P14949|THIO_BACSU -            104   0.00027   20.9   0.0   1   1   3.7e-07   0.00036   20.4   0.0    16    80    16    78     8    80 0.81 Thioredoxin-like
Glutaredoxin         PF00462.19    60 sp|P14949|THIO_BACSU -            104    0.0008   19.3   0.0   1   1   1.3e-06    0.0012   18.7   0.0     5    59    25    83    19    84 0.74 Glutaredoxin
TraF                 PF13728.1    215 sp|P14949|THIO_BACSU -            104     0.068   12.6   0.0   1   1   7.7e-05     0.076   12.4   0.0   116   191    13    79     4    99 0.75 F plasmid transfer operon protein
Thioredoxin_6        PF13848.1    184 sp|P14949|THIO_BACSU -            104     0.072   12.8   0.0   1   1   8.8e-05     0.087   12.6   0.0   117   183    39   101    33   102 0.81 Thioredoxin-like domain
Thioredoxin_4        PF13462.1    163 sp|P14949|THIO_BACSU -            104      0.11   12.4   0.0   2   2   0.00045      0.44   10.5   0.0   121   154    55    90    39   102 0.76 Thioredoxin
ThiS                 PF02597.15    77 sp|O31617|THIS_BACSU -             66   1.6e-10   41.2   0.1   1   1     3e-14   2.3e-10   40.7   0.1    11    77    12    66     1    66 0.88 ThiS family
Lambda_tail_I        PF06805.7     82 sp|O31617|THIS_BACSU -             66     0.034   13.9   0.0   1   1   4.8e-06     0.036   13.8   0.0    45    82    29    66     4    66 0.84 Bacteriophage lambda tail assembly protein I
Thia_YuaJ            PF09515.5    177 sp|O32074|THIT_BACSU -            192   1.2e-62  210.8  19.0   1   1   2.6e-66   1.3e-62  210.7  19.0     1   176    10   187    10   188 0.99 Thiamine transporter protein (Thia_YuaJ)
DUF3816              PF12822.2    172 sp|O32074|THIT_BACSU -            192   0.00027   20.8  24.4   1   1   8.6e-08   0.00042   20.2  24.3     3   171    10   176     8   180 0.76 Protein of unknown function (DUF3816)
DUF4118              PF13493.1    105 sp|O32074|THIT_BACSU -            192    0.0097   16.0  22.5   1   3   2.4e-06     0.012   15.7   4.3     2    57    10    66     9    86 0.76 Domain of unknown function (DUF4118)
Thiolase_N           PF00108.18   264 sp|P45855|THL_BACSU  -            393  3.4e-107  357.3   0.6   1   2  1.5e-110  5.5e-107  356.6   0.4     1   264     1   263     1   263 0.99 Thiolase, N-terminal domain
Thiolase_C           PF02803.13   123 sp|P45855|THL_BACSU  -            393   4.4e-49  164.9   1.9   2   2   2.2e-52   8.1e-49  164.1   1.0     2   122   271   391   270   392 0.99 Thiolase, C-terminal domain
ketoacyl-synt        PF00109.21   254 sp|P45855|THL_BACSU  -            393   0.00018   21.0   5.4   2   2   4.2e-07    0.0016   18.0   0.4   168   208    80   120    77   134 0.89 Beta-ketoacyl synthase, N-terminal domain
LigT_PEase           PF02834.11    87 sp|O34570|THPR_BACSU -            183     1e-28   99.0   0.3   1   2   2.9e-19   1.4e-15   56.9   0.0     1    86    12    94    12    95 0.94 LigT like Phosphoesterase
LigT_PEase           PF02834.11    87 sp|O34570|THPR_BACSU -            183     1e-28   99.0   0.3   2   2   3.7e-14   1.8e-10   40.6   0.1     4    87    99   174    96   174 0.89 LigT like Phosphoesterase
2_5_RNA_ligase2      PF13563.1    153 sp|O34570|THPR_BACSU -            183   2.2e-19   69.6   0.1   1   1   4.7e-23   2.3e-19   69.5   0.1    19   122    36   141    14   169 0.88 2'-5' RNA ligase superfamily
AKAP7_NLS            PF10469.4    209 sp|O34570|THPR_BACSU -            183   7.3e-11   42.1   0.0   1   1   1.6e-14     8e-11   42.0   0.0    37   150    37   136     6   173 0.84 AKAP7 2'5' RNA ligase-like domain
PALP                 PF00291.20   306 sp|P04990|THRC_BACSU -            352   8.5e-68  228.8   4.0   1   1   1.3e-71   9.8e-68  228.6   4.0     2   306    23   315    22   315 0.90 Pyridoxal-phosphate dependent enzyme
RnfC_N               PF13375.1    101 sp|P04990|THRC_BACSU -            352     0.036   13.7   1.1   2   2     2e-05      0.15   11.8   0.1    49    95   266   313   258   317 0.86 RnfC Barrel sandwich hybrid domain
Trigger_C            PF05698.9    162 sp|P80698|TIG_BACSU  -            424   5.6e-47  159.5  22.7   2   2   2.3e-50   5.6e-47  159.5  22.7     1   162   264   422   264   422 0.99 Bacterial trigger factor protein (TF) C-terminus
Trigger_N            PF05697.8    145 sp|P80698|TIG_BACSU  -            424   1.5e-45  154.5  15.3   1   4   1.5e-47   3.8e-44  150.0   2.9     1   145     1   146     1   146 0.99 Bacterial trigger factor protein (TF)
FKBP_C               PF00254.23    94 sp|P80698|TIG_BACSU  -            424   4.1e-16   58.7   2.2   2   2   5.9e-19   1.5e-15   57.0   0.6     4    94   159   240   156   240 0.96 FKBP-type peptidyl-prolyl cis-trans isomerase
RHH_1                PF01402.16    39 sp|P80698|TIG_BACSU  -            424     0.034   14.0   3.4   2   2   0.00017      0.42   10.5   0.0     7    25   376   394   376   397 0.93 Ribbon-helix-helix protein, copG family
SurA_N               PF09312.6    118 sp|P80698|TIG_BACSU  -            424      0.35   10.7   8.4   2   2   8.5e-05      0.21   11.4   3.7    15    95   310   402   304   417 0.73 SurA N-terminal domain
ATP_bind_3           PF01171.15   182 sp|P37563|TILS_BACSU -            472   3.9e-63  212.2   0.1   1   1   1.8e-66   6.5e-63  211.5   0.1     2   181    20   202    19   203 0.98 PP-loop family
TilS_C               PF11734.3     74 sp|P37563|TILS_BACSU -            472   2.8e-15   55.3   0.1   1   1   1.6e-18   5.8e-15   54.2   0.1     1    57   385   442   385   458 0.95 TilS substrate C-terminal domain
TilS                 PF09179.6     69 sp|P37563|TILS_BACSU -            472   2.4e-07   30.6   0.0   1   1   1.4e-10   5.1e-07   29.6   0.0     4    69   258   325   255   325 0.94 TilS substrate binding domain
NAD_synthase         PF02540.12   242 sp|P37563|TILS_BACSU -            472     0.068   12.0   0.0   1   1   2.9e-05      0.11   11.3   0.0     3    90     2    93     1   111 0.68 NAD synthase
2-Hacid_dh_C         PF02826.14   178 sp|O32264|TKRA_BACSU -            325   9.6e-67  223.5   0.0   1   1   5.7e-70   1.4e-66  223.0   0.0     2   178   112   290   111   290 0.98 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain
2-Hacid_dh           PF00389.25   133 sp|O32264|TKRA_BACSU -            325     2e-32  111.4   0.0   1   1   9.2e-36   2.3e-32  111.2   0.0     1   131     6   320     6   322 0.97 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain
NAD_binding_2        PF03446.10   163 sp|O32264|TKRA_BACSU -            325   7.3e-05   22.6   0.0   2   2   1.2e-07   0.00028   20.7   0.0     2   110   149   255   148   264 0.85 NAD binding domain of 6-phosphogluconate dehydrogenase
F420_oxidored        PF03807.12    96 sp|O32264|TKRA_BACSU -            325     0.034   14.5   0.0   1   1   4.3e-05      0.11   12.9   0.0     2    72   151   214   150   224 0.80 NADP oxidoreductase coenzyme F420-dependent
IlvN                 PF07991.7    165 sp|O32264|TKRA_BACSU -            325     0.071   12.4   0.0   1   1   4.4e-05      0.11   11.8   0.0     3    82   147   227   145   252 0.78 Acetohydroxy acid isomeroreductase, catalytic domain
Shikimate_DH         PF01488.15   135 sp|O32264|TKRA_BACSU -            325      0.14   12.2   0.1   1   1   0.00027      0.67   10.0   0.1    10   116   146   246   138   252 0.77 Shikimate / quinate 5-dehydrogenase
Transketolase_N      PF00456.16   333 sp|P45694|TKT_BACSU  -            667  7.9e-148  491.6   0.0   1   1  5.1e-151  1.3e-147  491.0   0.0     2   333     5   338     4   338 0.99 Transketolase, thiamine diphosphate binding domain
Transket_pyr         PF02779.19   178 sp|P45694|TKT_BACSU  -            667   7.6e-46  155.8   0.0   3   3   2.1e-48   5.2e-45  153.1   0.0     3   176   354   524   352   525 0.97 Transketolase, pyrimidine binding domain
DXP_synthase_N       PF13292.1    270 sp|P45694|TKT_BACSU  -            667     1e-09   37.7   0.2   1   2   2.3e-06    0.0057   15.6   0.1   115   175   119   190   111   195 0.81 1-deoxy-D-xylulose-5-phosphate synthase
DXP_synthase_N       PF13292.1    270 sp|P45694|TKT_BACSU  -            667     1e-09   37.7   0.2   2   2   1.3e-07   0.00031   19.7   0.0   222   270   197   246   191   246 0.86 1-deoxy-D-xylulose-5-phosphate synthase
Transketolase_C      PF02780.15   124 sp|P45694|TKT_BACSU  -            667   6.3e-08   32.5   0.0   1   1   6.5e-11   1.6e-07   31.2   0.0     6   118   548   651   542   657 0.82 Transketolase, C-terminal domain
TPP_enzyme_C         PF02775.16   153 sp|P45694|TKT_BACSU  -            667   1.1e-05   25.0   0.6   1   1   4.2e-07     0.001   18.6   0.6    24   153   111   244    94   244 0.77 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain
E1_dh                PF00676.15   300 sp|P45694|TKT_BACSU  -            667    0.0053   15.5   0.0   1   1   4.1e-06      0.01   14.5   0.0   100   224   114   246    78   247 0.80 Dehydrogenase E1 component
DUF3022              PF11226.3    111 sp|Q45060|TLP_BACSU  -             83     0.056   13.3   0.1   1   1   3.8e-05     0.095   12.5   0.0    64    97     8    41     3    49 0.87 Protein of unknown function (DUF3022)
DUF1863              PF08937.6    130 sp|Q45060|TLP_BACSU  -             83     0.072   13.1   2.7   1   1   3.7e-05     0.091   12.8   2.7    10    70    14    72    11    76 0.78 MTH538 TIR-like domain (DUF1863)
DUF1993              PF09351.5    162 sp|Q45060|TLP_BACSU  -             83      0.16   11.8   1.1   1   1   7.7e-05      0.19   11.6   1.1    71   114     9    52     2    73 0.71 Domain of unknown function (DUF1993)
OmpH                 PF03938.9    158 sp|Q45060|TLP_BACSU  -             83      0.23   11.3  11.1   1   1   0.00011      0.28   11.1  11.1    37   108     5    79     1    81 0.81 Outer membrane protein (OmpH-like)
Phage_GPO            PF05929.6    276 sp|Q45060|TLP_BACSU  -             83      0.25   10.5   6.1   1   1    0.0001      0.25   10.5   6.1   186   260     5    79     1    83 0.88 Phage capsid scaffolding protein (GPO) serine peptidase
Topoisom_bac         PF01131.15   403 sp|P39814|TOP1_BACSU -            691  2.3e-139  464.7   0.8   1   1  2.7e-142  2.9e-139  464.3   0.8     2   402   128   547   127   548 0.91 DNA topoisomerase
zf-C4_Topoisom       PF01396.14    39 sp|P39814|TOP1_BACSU -            691   1.5e-32  110.7  25.5   1   3   3.7e-18   3.9e-15   55.0   2.5     2    38   577   613   576   614 0.94 Topoisomerase DNA binding C4 zinc finger
zf-C4_Topoisom       PF01396.14    39 sp|P39814|TOP1_BACSU -            691   1.5e-32  110.7  25.5   2   3   1.2e-17   1.2e-14   53.4   3.0     2    38   617   655   616   656 0.96 Topoisomerase DNA binding C4 zinc finger
zf-C4_Topoisom       PF01396.14    39 sp|P39814|TOP1_BACSU -            691   1.5e-32  110.7  25.5   3   3   2.5e-05     0.026   14.0   4.5     2    34   658   687   657   691 0.84 Topoisomerase DNA binding C4 zinc finger
Toprim               PF01751.17   100 sp|P39814|TOP1_BACSU -            691     7e-24   83.7   0.0   1   1   1.7e-26   1.8e-23   82.4   0.0     2   100     5   113     4   113 0.96 Toprim domain
Toprim_4             PF13662.1     81 sp|P39814|TOP1_BACSU -            691   2.7e-06   27.2   0.1   1   1   9.2e-09   9.7e-06   25.5   0.1     2    80     4   109     3   110 0.81 Toprim domain
RNA_POL_M_15KD       PF02150.11    35 sp|P39814|TOP1_BACSU -            691    0.0016   18.0   3.1   3   3   1.6e-06    0.0016   18.0   3.1     4    31   660   688   659   690 0.95 RNA polymerases M/15 Kd subunit
zf-ribbon_3          PF13248.1     26 sp|P39814|TOP1_BACSU -            691     0.099   11.8  10.4   1   2   6.4e-05     0.068   12.4   6.6     3    24   617   665   615   667 0.89 zinc-ribbon domain
zf-ribbon_3          PF13248.1     26 sp|P39814|TOP1_BACSU -            691     0.099   11.8  10.4   2   2   0.00064      0.68    9.2   0.3     2    12   657   668   656   673 0.74 zinc-ribbon domain
DUF2387              PF09526.5     71 sp|P39814|TOP1_BACSU -            691      0.14   12.0   7.8   2   2    0.0006      0.64    9.9   3.0    10    41   659   688   658   691 0.77 Probable metal-binding protein (DUF2387)
DZR                  PF12773.2     50 sp|P39814|TOP1_BACSU -            691       1.8    8.4  10.3   2   2   0.00072      0.76    9.6   2.2    12    41   657   689   645   691 0.78 Double zinc ribbon
Topoisom_bac         PF01131.15   403 sp|P96583|TOP3_BACSU -            727    5e-121  404.3   4.5   1   1  8.5e-124  7.4e-121  403.7   4.5     1   402   151   582   151   583 0.92 DNA topoisomerase
Toprim               PF01751.17   100 sp|P96583|TOP3_BACSU -            727   3.1e-12   46.3   0.0   1   1   2.6e-14   2.3e-11   43.5   0.0     2    99     5   134     4   135 0.96 Toprim domain
zf-ISL3              PF14690.1     47 sp|P96583|TOP3_BACSU -            727    0.0022   18.0   5.1   1   2   7.8e-05     0.068   13.2   0.7     3    19   611   627   609   644 0.88 zinc-finger of transposase IS204/IS1001/IS1096/IS1165
zf-C4_Topoisom       PF01396.14    39 sp|P96583|TOP3_BACSU -            727     0.034   13.6   8.3   1   2   2.8e-05     0.024   14.1   1.7     3    26   612   635   610   647 0.84 Topoisomerase DNA binding C4 zinc finger
DUF2387              PF09526.5     71 sp|P96583|TOP3_BACSU -            727       0.6   10.0   9.8   2   2   0.00081      0.71    9.8   1.7     9    56   650   696   640   713 0.71 Probable metal-binding protein (DUF2387)
zf-DNA_Pol           PF08996.5    188 sp|P96583|TOP3_BACSU -            727      0.92    8.8   8.2   1   1   0.00017      0.15   11.3   3.3    79   160   630   708   627   724 0.65 DNA Polymerase alpha zinc finger
RNA_POL_M_15KD       PF02150.11    35 sp|P96583|TOP3_BACSU -            727       1.6    8.5   8.5   1   1   0.00011     0.092   12.4   1.6     4    28   613   640   613   644 0.84 RNA polymerases M/15 Kd subunit
Cytochrom_c3_2       PF14537.1     80 sp|P96583|TOP3_BACSU -            727       6.3    7.2   8.9   1   1   0.00062      0.54   10.6   2.1     5    46   648   694   644   716 0.67 Cytochrome c3
TIM                  PF00121.13   244 sp|P27876|TPIS_BACSU -            253   2.4e-94  314.9   0.4   1   1   1.8e-98   2.7e-94  314.7   0.4     1   243     4   246     4   247 0.99 Triosephosphate isomerase
Redoxin              PF08534.5    146 sp|P80864|TPX_BACSU  -            167   2.3e-22   79.1   0.0   1   1   3.8e-26   2.8e-22   78.8   0.0     1   143    19   156    19   161 0.86 Redoxin
AhpC-TSA             PF00578.16   124 sp|P80864|TPX_BACSU  -            167   7.5e-21   74.0   0.0   1   1   1.2e-24   8.9e-21   73.8   0.0     1   124    20   143    20   143 0.97 AhpC/TSA family
Alpha-amylase        PF00128.19   316 sp|P39795|TREC_BACSU -            561  2.1e-113  378.8   6.4   1   1  8.3e-117  3.1e-113  378.3   6.4     1   314    31   376    31   382 0.99 Alpha amylase, catalytic domain
hDGE_amylase         PF14701.1    423 sp|P39795|TREC_BACSU -            561   0.00045   19.2   0.1   1   1   3.3e-07    0.0012   17.8   0.1    22   111    34   116    25   123 0.86 glucanotransferase domain of human glycogen debranching enzyme
Alpha-amylase_C      PF02806.13    96 sp|P39795|TREC_BACSU -            561    0.0085   16.2   0.0   1   1     2e-05     0.074   13.1   0.0     7    61   487   541   483   558 0.67 Alpha amylase, C-terminal all-beta domain
Glyco_hydro_42C      PF08533.5     58 sp|P39795|TREC_BACSU -            561      0.06   12.8   0.3   2   2   0.00016      0.58    9.6   0.0     7    57   496   556   493   557 0.77 Beta-galactosidase C-terminal domain
Bac_globin           PF01152.16   120 sp|O31607|TRHBO_BACSU -            132   5.3e-31  107.1   0.0   1   1   8.2e-35   6.1e-31  106.9   0.0     3   119     9   123     7   124 0.94 Bacterial-like globin
Protoglobin          PF11563.3    158 sp|O31607|TRHBO_BACSU -            132   0.00018   21.2   0.0   1   1   3.8e-08   0.00028   20.5   0.0    28    71    12    57     7    65 0.87 Protoglobin
Methyltransf_4       PF02390.12   197 sp|O34522|TRMB_BACSU -            213   2.9e-59  199.4   0.0   1   1   1.7e-62   3.5e-59  199.1   0.0     9   196    28   211    20   212 0.94 Putative methyltransferase
Methyltransf_12      PF08242.7     99 sp|O34522|TRMB_BACSU -            213   1.1e-06   28.9   0.0   1   1   9.5e-10     2e-06   28.1   0.0     2    61    44   103    43   129 0.91 Methyltransferase domain
Methyltransf_31      PF13847.1    152 sp|O34522|TRMB_BACSU -            213     2e-05   24.2   0.0   1   1   1.4e-08   2.9e-05   23.7   0.0     7    67    42   101    37   153 0.91 Methyltransferase domain
Methyltransf_26      PF13659.1    117 sp|O34522|TRMB_BACSU -            213   2.6e-05   24.2   0.0   1   1   2.5e-08   5.3e-05   23.2   0.0     5   112    43   150    41   155 0.90 Methyltransferase domain
Methyltransf_18      PF12847.2    112 sp|O34522|TRMB_BACSU -            213    0.0007   20.1   0.0   1   1   5.1e-07    0.0011   19.5   0.0     5    76    41   114    38   153 0.74 Methyltransferase domain
Methyltransf_11      PF08241.7     95 sp|O34522|TRMB_BACSU -            213    0.0043   17.4   0.0   1   1   4.1e-06    0.0086   16.5   0.0     2    54    44   100    43   129 0.83 Methyltransferase domain
PCMT                 PF01135.14   210 sp|O34522|TRMB_BACSU -            213     0.047   13.2   0.0   1   1   2.9e-05      0.06   12.8   0.0    39   132     4    96     1   103 0.79 Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT)
tRNA_m1G_MT          PF01746.16   186 sp|O31741|TRMD_BACSU -            243   1.8e-65  220.0   0.0   1   1   1.4e-69   2.1e-65  219.8   0.0     2   186    23   221    22   221 0.98 tRNA (Guanine-1)-methyltransferase
GIDA                 PF01134.17   392 sp|P39815|TRMFO_BACSU -            435  2.1e-118  395.6   0.0   1   1  2.7e-121  2.9e-118  395.1   0.0     2   391     6   367     5   368 0.98 Glucose inhibited division protein A
NAD_binding_8        PF13450.1     68 sp|P39815|TRMFO_BACSU -            435   2.4e-07   30.6   0.1   1   2   8.5e-09     9e-06   25.6   0.1     1    29     8    36     8    37 0.96 NAD(P)-binding Rossmann-like domain
DAO                  PF01266.19   358 sp|P39815|TRMFO_BACSU -            435   8.8e-07   28.1   0.0   1   2   5.9e-09   6.2e-06   25.3   0.0     2    36     6    40     5   215 0.89 FAD dependent oxidoreductase
3HCDH_N              PF02737.13   180 sp|P39815|TRMFO_BACSU -            435   0.00021   20.9   0.1   1   1   4.3e-07   0.00045   19.9   0.1     1    56     5    58     5    84 0.75 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain
Pyr_redox            PF00070.22    80 sp|P39815|TRMFO_BACSU -            435   0.00053   20.3   0.0   1   1   3.2e-06    0.0034   17.7   0.0     3    32     7    36     5    62 0.89 Pyridine nucleotide-disulphide oxidoreductase
Pyr_redox_2          PF07992.9    201 sp|P39815|TRMFO_BACSU -            435   0.00081   19.3   0.0   1   1   1.7e-06    0.0018   18.1   0.0     2   119     6   136     5   172 0.56 Pyridine nucleotide-disulphide oxidoreductase
FAD_binding_2        PF00890.19   417 sp|P39815|TRMFO_BACSU -            435    0.0058   15.5   0.2   1   1   1.1e-05     0.011   14.5   0.0     4    34     8    38     5    46 0.86 FAD binding domain
Lycopene_cycl        PF05834.7    374 sp|P39815|TRMFO_BACSU -            435     0.008   15.1   0.1   1   1   1.6e-05     0.017   14.1   0.0     4   117     8   131     6   145 0.80 Lycopene cyclase protein
AlaDh_PNT_C          PF01262.16   168 sp|P39815|TRMFO_BACSU -            435      0.01   15.4   0.0   1   1   2.3e-05     0.024   14.1   0.0    21    56     4    39     1    57 0.90 Alanine dehydrogenase/PNT, C-terminal domain
HI0933_like          PF03486.9    409 sp|P39815|TRMFO_BACSU -            435     0.012   14.1   0.0   1   2   8.3e-05     0.088   11.2   0.0     2    31     5    34     4    38 0.92 HI0933-like protein
FAD_binding_3        PF01494.14   356 sp|P39815|TRMFO_BACSU -            435     0.024   13.7   0.0   1   1   3.8e-05      0.04   12.9   0.0     3    31     5    33     3    48 0.87 FAD binding domain
NAD_binding_9        PF13454.1    156 sp|P39815|TRMFO_BACSU -            435     0.025   14.3   0.0   1   2   0.00054      0.57    9.9   0.0     2    59     8    66     7    91 0.77 FAD-NAD(P)-binding
ThiF                 PF00899.16   136 sp|P39815|TRMFO_BACSU -            435     0.063   13.1   0.0   1   1   0.00014      0.15   11.9   0.0     2    27     3    28     2    34 0.91 ThiF family
Thi4                 PF01946.12   230 sp|P39815|TRMFO_BACSU -            435      0.11   11.6   0.1   1   1   0.00042      0.44    9.5   0.0    19    48     5    34     1    41 0.90 Thi4 family
DUF633               PF04816.7    205 sp|P54471|TRMK_BACSU -            238   3.8e-78  261.5   0.6   1   1     6e-82   4.5e-78  261.3   0.6     1   205    23   233    23   233 0.98 Family of unknown function (DUF633)
Methyltransf_18      PF12847.2    112 sp|P54471|TRMK_BACSU -            238     0.006   17.1   0.1   1   2   1.8e-06     0.013   16.0   0.0     3   111    20   122    18   123 0.89 Methyltransferase domain
SpoU_methylase       PF00588.14   142 sp|O31590|TRML_BACSU -            160   1.5e-35  122.1   0.0   1   1   1.1e-39   1.7e-35  121.9   0.0     2   142     6   148     5   148 0.88 SpoU rRNA Methylase family
Trp_syntA            PF00290.15   259 sp|P07601|TRPA_BACSU -            267   3.4e-98  327.2   0.1   1   1  1.1e-101   4.1e-98  327.0   0.1     3   256     4   255     2   259 0.96 Tryptophan synthase alpha chain
PcrB                 PF01884.12   231 sp|P07601|TRPA_BACSU -            267   0.00026   20.3   0.2   2   2   4.6e-07    0.0017   17.6   0.1   173   225   189   238   172   244 0.83 PcrB family
His_biosynth         PF00977.16   229 sp|P07601|TRPA_BACSU -            267    0.0032   16.7   0.1   1   1   1.8e-06    0.0068   15.6   0.1    62   114   187   238   173   248 0.85 Histidine biosynthesis protein
BtpA                 PF03437.10   254 sp|P07601|TRPA_BACSU -            267    0.0041   16.4   0.3   1   1   2.8e-06     0.011   15.0   0.3   192   232   190   231   145   238 0.74 BtpA family
PALP                 PF00291.20   306 sp|P07600|TRPB_BACSU -            400   5.3e-48  163.8   0.9   1   1   9.8e-52   7.2e-48  163.3   0.9     5   306    56   379    53   379 0.77 Pyridoxal-phosphate dependent enzyme
NCD1                 PF04904.8     82 sp|P07600|TRPB_BACSU -            400     0.055   13.2   0.0   1   2   0.00013      0.96    9.2   0.0    37    77   178   218   168   220 0.87 NAB conserved region 1 (NCD1)
IGPS                 PF00218.16   254 sp|P03964|TRPC_BACSU -            249   2.4e-86  288.9   0.6   1   1   3.8e-90   2.8e-86  288.7   0.6     1   254     2   246     2   246 0.96 Indole-3-glycerol phosphate synthase
His_biosynth         PF00977.16   229 sp|P03964|TRPC_BACSU -            249    0.0049   16.1   0.0   2   2     4e-05      0.29   10.3   0.0   183   225   191   235   185   239 0.75 Histidine biosynthesis protein
Glycos_transf_3      PF00591.16   253 sp|P03947|TRPD_BACSU -            338  2.7e-103  344.8   0.5   1   1  4.7e-107  3.5e-103  344.4   0.5     2   252    71   322    70   323 0.99 Glycosyl transferase family, a/b domain
Glycos_trans_3N      PF02885.12    66 sp|P03947|TRPD_BACSU -            338   2.2e-17   62.4   0.9   1   2   2.9e-21   2.2e-17   62.4   0.9     4    65     3    64     1    65 0.96 Glycosyl transferase family, helical bundle domain
Chorismate_bind      PF00425.13   257 sp|P03963|TRPE_BACSU -            515   1.8e-92  309.3   0.0   1   1   3.4e-96   2.5e-92  308.8   0.0     2   257   231   484   230   484 0.97 chorismate binding enzyme
Anth_synt_I_N        PF04715.8    140 sp|P03963|TRPE_BACSU -            515   1.1e-28   99.9   0.0   1   2   7.5e-32   5.5e-28   97.7   0.0     1   139    29   167    29   168 0.87 Anthranilate synthase component I, N terminal region
PRAI                 PF00697.17   197 sp|P20167|TRPF_BACSU -            215     1e-53  181.8   0.1   1   1   7.8e-58   1.2e-53  181.6   0.1     2   194     7   203     6   206 0.93 N-(5'phosphoribosyl)anthranilate (PRA) isomerase
DUF3816              PF12822.2    172 sp|O07515|TRPP_BACSU -            172   1.3e-06   28.4  30.5   1   1     2e-10   1.5e-06   28.2  30.5     1   171     4   161     4   162 0.79 Protein of unknown function (DUF3816)
DUF3353              PF11833.3    194 sp|O07515|TRPP_BACSU -            172     0.047   13.1   9.4   1   1   7.7e-06     0.057   12.8   8.8    85   187    43   141    28   154 0.72 Protein of unknown function (DUF3353)
PseudoU_synth_1      PF01416.15   105 sp|P70973|TRUA_BACSU -            247   3.3e-38  130.3   0.0   1   2   4.9e-15   7.3e-11   42.4   0.0     3   105     7   105     5   105 0.92 tRNA pseudouridine synthase
PseudoU_synth_1      PF01416.15   105 sp|P70973|TRUA_BACSU -            247   3.3e-38  130.3   0.0   2   2   1.3e-28   1.9e-24   86.1   0.0     1   105   144   246   144   246 0.98 tRNA pseudouridine synthase
TruB_N               PF01509.13   149 sp|P32732|TRUB_BACSU -            309   6.3e-59  198.4   1.8   1   1   1.3e-62   9.9e-59  197.7   1.8     1   149    24   178    24   178 0.95 TruB family pseudouridylate synthase (N terminal domain)
PseudoU_synth_2      PF00849.17   164 sp|P32732|TRUB_BACSU -            309    0.0033   17.2   0.2   1   1   6.3e-07    0.0047   16.7   0.2     2   101     5    98     4   183 0.76 RNA pseudouridylate synthase
Pyr_redox_2          PF07992.9    201 sp|P80880|TRXB_BACSU -            316   5.3e-31  108.0   1.7   1   1   7.9e-34   6.9e-31  107.6   1.7     1   198     8   281     8   284 0.92 Pyridine nucleotide-disulphide oxidoreductase
Pyr_redox            PF00070.22    80 sp|P80880|TRXB_BACSU -            316   4.9e-19   68.5   3.2   2   2   1.1e-19   9.2e-17   61.2   0.6     2    77   148   219   147   225 0.91 Pyridine nucleotide-disulphide oxidoreductase
Pyr_redox_3          PF13738.1    203 sp|P80880|TRXB_BACSU -            316   7.5e-17   62.0   0.4   1   2   2.5e-07   0.00022   21.3   0.1     1    44    10    51    10    87 0.72 Pyridine nucleotide-disulphide oxidoreductase
Pyr_redox_3          PF13738.1    203 sp|P80880|TRXB_BACSU -            316   7.5e-17   62.0   0.4   2   2   9.6e-13   8.4e-10   39.0   0.0    81   200    61   178    46   181 0.82 Pyridine nucleotide-disulphide oxidoreductase
GIDA                 PF01134.17   392 sp|P80880|TRXB_BACSU -            316     1e-09   37.7   2.5   1   4   2.2e-08   1.9e-05   23.7   0.1     1    47     8    62     8    79 0.85 Glucose inhibited division protein A
DAO                  PF01266.19   358 sp|P80880|TRXB_BACSU -            316   5.2e-09   35.4   4.6   1   4   1.2e-07   0.00011   21.2   0.1     1    35     8    42     8    47 0.91 FAD dependent oxidoreductase
DAO                  PF01266.19   358 sp|P80880|TRXB_BACSU -            316   5.2e-09   35.4   4.6   2   4   6.7e-05     0.059   12.2   0.2   149   206    64   119    53   178 0.87 FAD dependent oxidoreductase
FAD_binding_2        PF00890.19   417 sp|P80880|TRXB_BACSU -            316   2.1e-08   33.4   2.2   1   3   2.9e-08   2.6e-05   23.2   0.1     1    37     8    43     8    48 0.90 FAD binding domain
Thi4                 PF01946.12   230 sp|P80880|TRXB_BACSU -            316   6.9e-08   31.8   1.4   1   2   5.1e-09   4.5e-06   25.9   0.1    17    54     6    42     1    47 0.87 Thi4 family
FAD_oxidored         PF12831.2    428 sp|P80880|TRXB_BACSU -            316   6.6e-07   28.7   0.4   1   2   4.2e-09   3.7e-06   26.2   0.0     1    39     8    45     8    78 0.92 FAD dependent oxidoreductase
NAD_binding_8        PF13450.1     68 sp|P80880|TRXB_BACSU -            316   1.6e-06   28.0   0.1   1   1   8.7e-09   7.6e-06   25.8   0.0     1    54    11    67    11    79 0.80 NAD(P)-binding Rossmann-like domain
K_oxygenase          PF13434.1    341 sp|P80880|TRXB_BACSU -            316   1.9e-06   27.0   0.9   1   3   0.00062      0.54    9.1   0.0     1    34     5    37     5    39 0.81 L-lysine 6-monooxygenase (NADPH-requiring)
K_oxygenase          PF13434.1    341 sp|P80880|TRXB_BACSU -            316   1.9e-06   27.0   0.9   2   3   0.00012       0.1   11.5   0.1   143   246   100   197    67   203 0.64 L-lysine 6-monooxygenase (NADPH-requiring)
HI0933_like          PF03486.9    409 sp|P80880|TRXB_BACSU -            316   1.4e-05   23.7   4.8   1   3   6.1e-08   5.3e-05   21.8   0.2     1    32     7    38     7    44 0.93 HI0933-like protein
FAD_binding_3        PF01494.14   356 sp|P80880|TRXB_BACSU -            316    0.0002   20.5   0.3   1   2   1.9e-06    0.0017   17.5   0.2     2    32     7    37     6    39 0.95 FAD binding domain
Lycopene_cycl        PF05834.7    374 sp|P80880|TRXB_BACSU -            316   0.00069   18.6   0.5   1   2   2.3e-05      0.02   13.7   0.1     1    32     8    37     8    47 0.89 Lycopene cyclase protein
NAD_binding_7        PF13241.1    103 sp|P80880|TRXB_BACSU -            316     0.023   14.9   3.2   2   2     5e-05     0.044   14.0   0.7     5    48   143   197   142   308 0.70 Putative NAD(P)-binding
Mqo                  PF06039.10   489 sp|P80880|TRXB_BACSU -            316      0.11   10.7   0.8   2   2   0.00042      0.37    8.9   0.1   194   242   192   240   179   259 0.85 Malate:quinone oxidoreductase (Mqo)
Peptidase_M22        PF00814.20   268 sp|O05516|TSAB_BACSU -            229     6e-33  114.4   0.0   1   1   1.1e-36   8.1e-33  114.0   0.0    26   268    32   224    23   224 0.88 Glycoprotease family
UPF0081              PF03652.10   135 sp|O05516|TSAB_BACSU -            229      0.02   15.0   0.0   1   1   4.7e-06     0.035   14.2   0.0     1    49     1    49     1    62 0.86 Uncharacterised protein family (UPF0081)
Peptidase_M22        PF00814.20   268 sp|O05518|TSAD_BACSU -            346  4.1e-106  354.3   1.0   1   1  1.3e-109  4.8e-106  354.1   1.0     1   267    29   313    29   314 0.98 Glycoprotease family
BcrAD_BadFG          PF01869.15   271 sp|O05518|TSAD_BACSU -            346   2.2e-06   27.2   0.1   1   1   1.2e-09   4.5e-06   26.1   0.1     2   249    11   290    10   303 0.73 BadF/BadG/BcrA/BcrD ATPase family
CmcH_NodU            PF02543.10   360 sp|O05518|TSAD_BACSU -            346    0.0022   17.2   0.0   1   1   8.9e-07    0.0033   16.6   0.0   126   186   229   288   185   321 0.79 Carbamoyltransferase
UPF0079              PF02367.12   123 sp|O05515|TSAE_BACSU -            158   2.3e-41  140.2   0.0   1   1   9.2e-45   2.7e-41  140.0   0.0     1   123    14   134    14   134 0.96 Uncharacterised P-loop hydrolase UPF0079
AAA_17               PF13207.1    121 sp|O05515|TSAE_BACSU -            158     0.025   15.3   0.0   1   1   1.4e-05     0.041   14.7   0.0     9    77    38   126    31   156 0.67 AAA domain
AAA_33               PF13671.1    143 sp|O05515|TSAE_BACSU -            158     0.037   13.8   0.0   1   1   1.3e-05      0.04   13.8   0.0     3    33    32    63    30   143 0.77 AAA domain
NACHT                PF05729.7    166 sp|O05515|TSAE_BACSU -            158      0.14   11.7   0.1   1   1   8.8e-05      0.26   10.9   0.1     2    24    30    52    29    63 0.89 NACHT domain
Iso_dh               PF00180.15   348 sp|P42958|TTUC_BACSU -            354   2.9e-86  289.5   0.0   1   1   2.4e-90   3.5e-86  289.3   0.0     2   348     8   347     7   349 0.95 Isocitrate/isopropylmalate dehydrogenase
Bac_transf           PF02397.11   187 sp|O32274|TUAA_BACSU -            179     3e-49  166.6   0.0   1   1   2.6e-53   3.8e-49  166.3   0.0     1   128    34   161    34   165 0.96 Bacterial sugar transferase
Polysacc_synt        PF01943.12   273 sp|O32273|TUAB_BACSU -            483   2.7e-60  203.9  26.9   1   3   5.4e-64   2.7e-60  203.9  26.9     4   272    11   276     8   277 0.98 Polysaccharide biosynthesis protein
Polysacc_synt_3      PF13440.1    251 sp|O32273|TUAB_BACSU -            483   1.4e-15   57.4  21.7   1   3   2.8e-19   1.4e-15   57.4  21.7     3   250    25   275    23   276 0.89 Polysaccharide biosynthesis protein
Polysacc_synt_C      PF14667.1    146 sp|O32273|TUAB_BACSU -            483   4.7e-08   32.9  20.9   3   3   9.6e-12   4.7e-08   32.9  20.9     1   143   327   467   327   469 0.92 Polysaccharide biosynthesis C-terminal domain
Glycos_transf_1      PF00534.15   172 sp|O32272|TUAC_BACSU -            389   2.7e-32  111.5   0.0   1   1   2.8e-35   5.2e-32  110.6   0.0     2   159   206   350   205   365 0.93 Glycosyl transferases group 1
Glyco_trans_4_4      PF13579.1    160 sp|O32272|TUAC_BACSU -            389   3.6e-16   59.6   0.3   1   1   5.9e-19   1.1e-15   58.1   0.1    10   152    25   187    17   194 0.80 Glycosyl transferase 4-like domain
Glyco_trans_1_4      PF13692.1    135 sp|O32272|TUAC_BACSU -            389   1.6e-15   57.4   0.1   1   1   3.3e-18   6.1e-15   55.5   0.0     6   131   223   345   218   348 0.82 Glycosyl transferases group 1
Glyco_trans_4_2      PF13477.1    139 sp|O32272|TUAC_BACSU -            389   8.4e-11   41.8   0.0   1   1   3.1e-12   5.8e-09   35.9   0.0    12   138    21   171    14   172 0.66 Glycosyl transferase 4-like
Glyco_transf_4       PF13439.1    177 sp|O32272|TUAC_BACSU -            389   3.2e-07   30.2   0.0   1   1     2e-09   3.8e-06   26.7   0.0    52   176    79   199    17   200 0.71 Glycosyltransferase Family 4
Glyco_trans_1_2      PF13524.1     92 sp|O32272|TUAC_BACSU -            389   2.5e-05   24.4   0.0   1   1   3.3e-08   6.2e-05   23.1   0.0     3    91   289   378   285   379 0.89 Glycosyl transferases group 1
Glyco_transf_5       PF08323.6    245 sp|O32272|TUAC_BACSU -            389   0.00048   19.6   0.1   1   1   1.1e-06     0.002   17.6   0.1    19   231    19   180     2   188 0.65 Starch synthase catalytic domain
UDPG_MGDP_dh_N       PF03721.9    185 sp|O32271|TUAD_BACSU -            461   1.6e-71  239.5   2.7   1   2     2e-74   2.9e-71  238.6   1.4     1   185     2   185     2   185 0.98 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain
UDPG_MGDP_dh         PF00984.14    96 sp|O32271|TUAD_BACSU -            461   2.5e-40  136.5   0.1   1   1   7.3e-43   1.1e-39  134.5   0.0     1    96   198   293   198   293 0.98 UDP-glucose/GDP-mannose dehydrogenase family, central domain
UDPG_MGDP_dh_C       PF03720.10   106 sp|O32271|TUAD_BACSU -            461   8.2e-32  109.5   0.1   3   3   4.2e-32   6.3e-29  100.2   0.0     2   104   315   414   314   416 0.97 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain
NAD_Gly3P_dh_N       PF01210.18   157 sp|O32271|TUAD_BACSU -            461     2e-06   27.6   0.9   1   2     1e-08   1.5e-05   24.7   0.1     1   138     3   156     3   179 0.75 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus
3HCDH_N              PF02737.13   180 sp|O32271|TUAD_BACSU -            461   0.00031   20.4   0.0   1   1     6e-07   0.00089   18.9   0.0     1    81     3    80     3    87 0.79 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain
Pyr_redox            PF00070.22    80 sp|O32271|TUAD_BACSU -            461    0.0083   16.5   0.2   1   1   2.2e-05     0.032   14.6   0.2     1    29     3    31     3    49 0.91 Pyridine nucleotide-disulphide oxidoreductase
NAD_binding_2        PF03446.10   163 sp|O32271|TUAD_BACSU -            461     0.011   15.5   0.1   1   2   7.6e-05      0.11   12.2   0.0     1    65     1    85     1   142 0.72 NAD binding domain of 6-phosphogluconate dehydrogenase
ApbA                 PF02558.11   151 sp|O32271|TUAD_BACSU -            461     0.065   12.6   0.0   1   1   7.7e-05      0.11   11.8   0.0     1    53     4    62     4   118 0.76 Ketopantoate reductase PanE/ApbA
Glycos_transf_2      PF00535.21   169 sp|O32268|TUAG_BACSU -            252   9.6e-41  139.2   0.1   1   1   5.9e-44   1.2e-40  138.9   0.1     1   110     9   118     9   167 0.92 Glycosyl transferase family 2
Glyco_tranf_2_3      PF13641.1    228 sp|O32268|TUAG_BACSU -            252   1.1e-16   61.3   0.1   1   1   1.2e-19   2.6e-16   60.0   0.1     3   118     8   118     5   220 0.81 Glycosyltransferase like family 2
Glyco_tranf_2_2      PF10111.4    281 sp|O32268|TUAG_BACSU -            252   3.3e-11   42.7   0.0   1   1   2.4e-14   5.1e-11   42.1   0.0     1   112     9   110     9   133 0.82 Glycosyltransferase like family 2
Glyco_tranf_2_4      PF13704.1     97 sp|O32268|TUAG_BACSU -            252   3.1e-07   30.6   1.0   1   2   1.4e-10   3.1e-07   30.6   1.0     1    86    15   101    15   112 0.76 Glycosyl transferase family 2
Glyco_tranf_2_5      PF13712.1    217 sp|O32268|TUAG_BACSU -            252   0.00016   20.9   0.3   1   2   3.7e-06    0.0077   15.4   0.1    17    80    49   112    39   124 0.86 Glycosyltransferase like family
tRNA_lig_kinase      PF08303.6    168 sp|O32268|TUAG_BACSU -            252     0.048   13.5   0.1   1   2   7.4e-05      0.16   11.8   0.1    14    79    24    87    22   104 0.83 tRNA ligase kinase domain
DUF2487              PF10673.4    142 sp|O32268|TUAG_BACSU -            252     0.049   13.4   0.0   1   1   5.4e-05      0.11   12.2   0.0    77   110    79   111    64   134 0.73 Protein of unknown function (DUF2487)
Glyco_trans_1_4      PF13692.1    135 sp|O32267|TUAH_BACSU -            397   4.8e-18   65.6   0.0   1   1   2.8e-21   8.4e-18   64.8   0.0     3   133   222   359   220   361 0.81 Glycosyl transferases group 1
Glycos_transf_1      PF00534.15   172 sp|O32267|TUAH_BACSU -            397   5.4e-10   38.9   0.0   1   1   2.6e-13   7.8e-10   38.4   0.0    11   168   217   373   207   377 0.87 Glycosyl transferases group 1
Glyco_transf_4       PF13439.1    177 sp|O32267|TUAH_BACSU -            397    0.0019   17.9   0.0   1   1   1.2e-06    0.0036   17.0   0.0    32   177    10   205     3   205 0.77 Glycosyltransferase Family 4
Glyco_trans_4_4      PF13579.1    160 sp|O32267|TUAH_BACSU -            397    0.0021   18.2   0.0   1   1   2.3e-06    0.0067   16.5   0.0     9   160    28   198    23   198 0.62 Glycosyl transferase 4-like domain
Glyco_trans_1_2      PF13524.1     92 sp|O32267|TUAH_BACSU -            397      0.12   12.6   0.0   1   1   8.5e-05      0.25   11.6   0.0    10    90   308   387   294   389 0.73 Glycosyl transferases group 1
GTP_EFTU             PF00009.22   188 sp|O07631|TYPA_BACSU -            612   1.3e-56  191.0   0.3   1   1   1.8e-59   2.2e-56  190.2   0.3     2   187     6   197     5   198 0.96 Elongation factor Tu GTP binding domain
EFG_C                PF00679.19    89 sp|O07631|TYPA_BACSU -            612   1.7e-24   85.5   0.0   1   1   3.6e-27   4.5e-24   84.1   0.0     3    83   399   479   397   483 0.97 Elongation factor G C-terminus
GTP_EFTU_D2          PF03144.20    74 sp|O07631|TYPA_BACSU -            612   4.8e-14   52.2   1.6   1   1   3.9e-17   4.8e-14   52.2   1.6     1    74   221   291   221   291 0.97 Elongation factor Tu domain 2
EFG_II               PF14492.1     75 sp|O07631|TYPA_BACSU -            612   3.8e-07   29.8   0.1   1   1     1e-09   1.2e-06   28.2   0.0    18    66   330   378   325   386 0.90 Elongation Factor G, domain II
Miro                 PF08477.8    119 sp|O07631|TYPA_BACSU -            612     3e-06   27.7   0.0   1   1   6.5e-09   8.1e-06   26.3   0.0     2   119    10   133     9   133 0.71 Miro-like protein
MMR_HSR1             PF01926.18   116 sp|O07631|TYPA_BACSU -            612   1.6e-05   24.8   0.7   1   1   2.4e-08     3e-05   23.9   0.1     2   116    10   131     9   131 0.60 50S ribosome-binding GTPase
FeoB_N               PF02421.13   156 sp|O07631|TYPA_BACSU -            612   0.00051   19.3   0.9   2   3   1.5e-05     0.019   14.2   0.3    32   145    55   171    48   179 0.73 Ferrous iron transport protein B
Arf                  PF00025.16   175 sp|O07631|TYPA_BACSU -            612   0.00076   18.7   0.1   1   1   2.3e-06    0.0028   16.9   0.0    46   161    58   172    44   188 0.80 ADP-ribosylation factor family
SRPRB                PF09439.5    181 sp|O07631|TYPA_BACSU -            612    0.0034   16.6   0.2   1   1   2.8e-05     0.035   13.3   0.2     4    85     8   103     5   157 0.69 Signal recognition particle receptor beta subunit
Dynamin_N            PF00350.18   168 sp|O07631|TYPA_BACSU -            612    0.0078   16.0   0.2   2   2    0.0003      0.37   10.6   0.0    93   167    62   131    33   133 0.66 Dynamin family
Ras                  PF00071.17   162 sp|O07631|TYPA_BACSU -            612     0.062   12.6   0.0   1   1   0.00012      0.14   11.4   0.0    33   116    55   134    10   160 0.79 Ras family
AAA_33               PF13671.1    143 sp|O07631|TYPA_BACSU -            612     0.081   12.7   0.2   1   1   0.00021      0.26   11.1   0.0    11    47    19    63    18   166 0.75 AAA domain
Thymidylat_synt      PF00303.14   269 sp|P0CI79|TYSY1_BACSU -            279   1.7e-94  315.8   2.0   1   1   1.3e-98   1.9e-94  315.6   2.0     1   269     5   279     5   279 0.98 Thymidylate synthase
Thymidylat_synt      PF00303.14   269 sp|P11044|TYSY2_BACSU -            264  2.3e-123  410.4   0.0   1   1  1.7e-127  2.5e-123  410.3   0.0     2   269     2   264     1   264 0.99 Thymidylate synthase
DAGK_prokar          PF01219.14   104 sp|P19638|UDPK_BACSU -            123     1e-33  115.0   5.0   1   1   7.8e-38   1.2e-33  114.8   5.0     1   104    17   120    17   120 0.98 Prokaryotic diacylglycerol kinase
MGDG_synth           PF06925.6    169 sp|P54166|UGTP_BACSU -            382   1.4e-47  161.7   1.9   1   1   1.4e-50   2.7e-47  160.8   1.9     1   169    18   179    18   179 0.95 Monogalactosyldiacylglycerol (MGDG) synthase
Glycos_transf_1      PF00534.15   172 sp|P54166|UGTP_BACSU -            382   1.3e-18   66.9   0.3   1   1   1.1e-21   2.1e-18   66.3   0.3     7   170   195   350   185   352 0.89 Glycosyl transferases group 1
Glyco_trans_1_3      PF13528.1    318 sp|P54166|UGTP_BACSU -            382   2.6e-11   43.3   0.0   1   1   1.8e-14   3.4e-11   42.9   0.0     1   310     5   332     5   338 0.77 Glycosyl transferase family 1
Glyco_tran_28_C      PF04101.11   167 sp|P54166|UGTP_BACSU -            382   2.7e-11   43.4   0.1   1   1     3e-14   5.5e-11   42.4   0.1     3   154   206   348   204   374 0.74 Glycosyltransferase family 28 C-terminal domain
Epimerase_2          PF02350.14   346 sp|P54166|UGTP_BACSU -            382   2.2e-08   33.3   0.1   1   1     2e-11   3.7e-08   32.5   0.1   128   343   153   363   145   366 0.82 UDP-N-acetylglucosamine 2-epimerase
Glyco_trans_1_4      PF13692.1    135 sp|P54166|UGTP_BACSU -            382   2.2e-05   24.6   0.0   1   1   1.9e-08   3.6e-05   23.9   0.0     5   135   206   338   202   338 0.74 Glycosyl transferases group 1
Glyco_trans_1_2      PF13524.1     92 sp|P54166|UGTP_BACSU -            382   0.00095   19.3   0.0   1   1   1.1e-06     0.002   18.3   0.0    14    73   285   349   265   366 0.88 Glycosyl transferases group 1
LpxB                 PF02684.10   373 sp|P54166|UGTP_BACSU -            382     0.027   13.1   0.1   1   1   3.1e-05     0.058   12.0   0.0   180   285   198   299   174   303 0.81 Lipid-A-disaccharide synthetase
UDG                  PF03167.14   152 sp|P39615|UNG_BACSU  -            225   3.6e-26   91.4   0.0   1   1   3.3e-30   4.8e-26   91.0   0.0     6   151    55   210    50   211 0.96 Uracil DNA glycosylase superfamily
BacA                 PF02673.13   259 sp|P94507|UPPP_BACSU -            276   1.4e-83  280.0  13.5   1   1   3.3e-87   1.6e-83  279.8  13.5     2   259     9   271     8   271 0.95 Bacitracin resistance protein BacA
CAAD                 PF14159.1     90 sp|P94507|UPPP_BACSU -            276       7.3    6.3   8.3   3   3    0.0002      0.97    9.1   2.2    18    52   228   262   214   274 0.76 CAAD domains of cyanobacterial aminoacyl-tRNA synthetase
UPRTase              PF14681.1    207 sp|P39149|UPP_BACSU  -            209   3.9e-77  258.1   0.0   1   1     6e-81   4.5e-77  257.9   0.0     1   207     6   208     6   208 0.98 Uracil phosphoribosyltransferase
Pribosyltran         PF00156.22   125 sp|P39149|UPP_BACSU  -            209   2.1e-11   43.5   0.2   1   1   5.4e-15     4e-11   42.7   0.2    24   125    70   161    57   161 0.91 Phosphoribosyl transferase domain
Amidohydro_1         PF01979.15   333 sp|P77837|URE1_BACSU -            569   1.8e-64  218.5   6.6   1   1   8.9e-68   2.2e-64  218.2   6.6     1   333   128   438   128   438 0.97 Amidohydrolase family
Urease_alpha         PF00449.15   121 sp|P77837|URE1_BACSU -            569   6.3e-56  187.7   4.9   1   1   6.2e-59   1.5e-55  186.4   4.9     1   121     1   122     1   122 0.97 Urease alpha-subunit, N-terminal domain
Amidohydro_5         PF13594.1     68 sp|P77837|URE1_BACSU -            569   3.4e-08   33.1   3.2   1   1   3.8e-11   9.4e-08   31.7   3.2     1    67    87   156    87   163 0.70 Amidohydrolase
Amidohydro_3         PF07969.6    404 sp|P77837|URE1_BACSU -            569   1.4e-05   24.5   4.4   2   2   1.8e-07   0.00045   19.5   1.2   228   404   233   436   221   436 0.58 Amidohydrolase family
Amidohydro_4         PF13147.1    304 sp|P77837|URE1_BACSU -            569   2.5e-05   24.4   0.0   1   2   1.2e-05      0.03   14.3   0.0     2   110   124   258   123   358 0.68 Amidohydrolase
Amidohydro_2         PF04909.9    273 sp|P77837|URE1_BACSU -            569     0.033   13.7   0.0   1   1   1.9e-05     0.047   13.2   0.0    48   139   170   257   134   316 0.75 Amidohydrolase
Urease_beta          PF00699.15   100 sp|P71035|URE2_BACSU -            124   4.5e-41  138.7   0.2   1   1   7.1e-45   5.3e-41  138.5   0.2     2    97     3    98     2   101 0.97 Urease beta subunit
MspA                 PF09203.6    175 sp|P71035|URE2_BACSU -            124     0.088   12.2   0.0   1   1   1.4e-05      0.11   11.9   0.0    87   126    50    87    14   101 0.76 MspA
Urease_gamma         PF00547.13    99 sp|P75030|URE3_BACSU -            105     7e-46  154.2   0.1   1   1   5.3e-50   7.9e-46  154.1   0.1     1    99     1    99     1    99 1.00 Urease, gamma subunit
Glyco_hydro_88       PF07470.8    336 sp|O31521|URHG1_BACSU -            344     2e-95  319.6   0.6   1   1   3.2e-99   2.4e-95  319.4   0.6    15   335    20   338     7   339 0.96 Glycosyl Hydrolase Family 88
Glyco_hydro_88       PF07470.8    336 sp|O34559|URHG2_BACSU -            373  4.8e-116  387.4   6.1   1   1  2.2e-119  5.4e-116  387.2   6.1     2   333    17   365    16   368 0.98 Glycosyl Hydrolase Family 88
DUF1680              PF07944.7    520 sp|O34559|URHG2_BACSU -            373   0.00025   19.4   2.6   1   2   5.2e-06     0.013   13.8   0.1   124   205    40   117    17   134 0.83 Putative glycosyl hydrolase of unknown function (DUF1680)
Glyco_hydro_76       PF03663.9    370 sp|O34559|URHG2_BACSU -            373   0.00042   19.8   2.9   1   2   9.6e-05      0.24   10.7   0.0   216   250    37    70    21    86 0.80 Glycosyl hydrolase family 76
C5-epim_C            PF06662.8    189 sp|O34559|URHG2_BACSU -            373    0.0011   18.3   1.1   2   2   4.1e-05       0.1   11.8   0.0    35    73    92   132    85   146 0.75 D-glucuronyl C5-epimerase C-terminus
DUF3458              PF11940.3    367 sp|O34559|URHG2_BACSU -            373      0.14   10.9   0.0   1   1   0.00011      0.28    9.9   0.0   317   351   110   144   102   147 0.91 Domain of unknown function (DUF3458)
PRK                  PF00485.13   194 sp|O32033|URK_BACSU  -            211   7.3e-45  152.9   0.4   1   1   7.6e-48   8.7e-45  152.6   0.4     1   193     7   192     7   193 0.95 Phosphoribulokinase / Uridine kinase family
AAA_18               PF13238.1    129 sp|O32033|URK_BACSU  -            211   1.6e-07   31.6   1.5   1   1   2.5e-10   2.9e-07   30.8   1.5     1   117     8   150     8   163 0.66 AAA domain
Zeta_toxin           PF06414.7    201 sp|O32033|URK_BACSU  -            211   1.7e-05   23.9   0.0   1   2   4.4e-08     5e-05   22.4   0.0    14    53     3    42     1    78 0.91 Zeta toxin
AAA_17               PF13207.1    121 sp|O32033|URK_BACSU  -            211     3e-05   24.8   0.9   1   1   5.6e-08   6.4e-05   23.7   0.9     1   117     7   152     7   156 0.54 AAA domain
CoaE                 PF01121.15   180 sp|O32033|URK_BACSU  -            211    0.0002   20.8   0.8   1   2   0.00012      0.14   11.5   0.0     2    22     7    27     6    50 0.72 Dephospho-CoA kinase
AAA_16               PF13191.1    185 sp|O32033|URK_BACSU  -            211    0.0069   16.3   0.0   1   1   9.8e-06     0.011   15.7   0.0    25    58     6    37     1    79 0.77 AAA ATPase domain
ABC_tran             PF00005.22   137 sp|O32033|URK_BACSU  -            211     0.013   15.7   0.1   1   1     2e-05     0.023   15.0   0.1    13    51     7    43     3   101 0.82 ABC transporter
KAP_NTPase           PF07693.9    325 sp|O32033|URK_BACSU  -            211     0.025   13.5   0.4   1   2   0.00038      0.44    9.4   0.0    19    47     4    32     2    79 0.80 KAP family P-loop domain
MobB                 PF03205.9    140 sp|O32033|URK_BACSU  -            211     0.026   14.2   0.2   1   2   0.00021      0.24   11.0   0.0     2    27     7    32     6    43 0.87 Molybdopterin guanine dinucleotide synthesis protein B
AAA_22               PF13401.1    131 sp|O32033|URK_BACSU  -            211     0.034   14.2   0.1   1   1   6.1e-05      0.07   13.2   0.1     9    99    10   116     7   150 0.67 AAA domain
AAA_14               PF13173.1    128 sp|O32033|URK_BACSU  -            211     0.053   13.4   0.0   1   1   9.7e-05      0.11   12.3   0.0     4    82     7    80     4   100 0.66 AAA domain
CPT                  PF07931.7    174 sp|O32033|URK_BACSU  -            211     0.066   12.8   0.0   1   1   0.00013      0.14   11.7   0.0     3    39     7    44     5    76 0.84 Chloramphenicol phosphotransferase-like protein
NB-ARC               PF00931.17   287 sp|O32033|URK_BACSU  -            211      0.11   11.2   0.4   1   1   0.00017      0.19   10.5   0.4    17    43     3    29     1    36 0.88 NB-ARC domain
ABC_tran             PF00005.22   137 sp|O34863|UVRA_BACSU -            957   1.7e-22   80.2   0.1   1   3   1.3e-05    0.0047   17.2   0.0     1    28    16    43    16    67 0.93 ABC transporter
ABC_tran             PF00005.22   137 sp|O34863|UVRA_BACSU -            957   1.7e-22   80.2   0.1   2   3   3.8e-05     0.014   15.7   0.0    71   136   443   516   368   517 0.73 ABC transporter
ABC_tran             PF00005.22   137 sp|O34863|UVRA_BACSU -            957   1.7e-22   80.2   0.1   3   3   8.5e-13   3.1e-10   40.4   0.0     1   136   622   858   622   859 0.74 ABC transporter
SMC_N                PF02463.14   220 sp|O34863|UVRA_BACSU -            957   1.5e-12   47.2   0.1   1   3    0.0019      0.68    9.1   0.0     3    46     4    48     2    62 0.75 RecF/RecN/SMC N terminal domain
SMC_N                PF02463.14   220 sp|O34863|UVRA_BACSU -            957   1.5e-12   47.2   0.1   2   3   1.6e-05    0.0059   15.8   0.0    95   211   163   560   145   565 0.94 RecF/RecN/SMC N terminal domain
SMC_N                PF02463.14   220 sp|O34863|UVRA_BACSU -            957   1.5e-12   47.2   0.1   3   3   8.5e-05     0.031   13.5   0.0    24   209   632   900   612   907 0.69 RecF/RecN/SMC N terminal domain
AAA_16               PF13191.1    185 sp|O34863|UVRA_BACSU -            957   3.8e-08   33.5   0.0   1   2    0.0013      0.46   10.4   0.0    25    41    27    43    12    89 0.82 AAA ATPase domain
AAA_16               PF13191.1    185 sp|O34863|UVRA_BACSU -            957   3.8e-08   33.5   0.0   2   2   2.3e-06   0.00084   19.3   0.0    24    51   632   659   619   680 0.82 AAA ATPase domain
AAA_29               PF13555.1     62 sp|O34863|UVRA_BACSU -            957   7.3e-08   31.8   0.2   1   2   0.00036      0.13   11.7   0.0    17    39    21    42    13    49 0.77 P-loop containing region of AAA domain
AAA_29               PF13555.1     62 sp|O34863|UVRA_BACSU -            957   7.3e-08   31.8   0.2   2   2   6.5e-06    0.0024   17.3   0.1    22    41   631   650   620   664 0.83 P-loop containing region of AAA domain
DUF258               PF03193.11   161 sp|O34863|UVRA_BACSU -            957   1.2e-06   27.8   0.1   1   2    0.0019      0.67    9.1   0.0    23    52    13    43     2    63 0.78 Protein of unknown function, DUF258
DUF258               PF03193.11   161 sp|O34863|UVRA_BACSU -            957   1.2e-06   27.8   0.1   2   2   1.2e-05    0.0043   16.2   0.1    21    62   617   660   605   680 0.74 Protein of unknown function, DUF258
AAA_25               PF13481.1    194 sp|O34863|UVRA_BACSU -            957   1.9e-06   27.4   0.2   1   2   0.00027     0.096   12.0   0.0    29    56    22    49    11    54 0.89 AAA domain
AAA_25               PF13481.1    194 sp|O34863|UVRA_BACSU -            957   1.9e-06   27.4   0.2   2   2    0.0003      0.11   11.8   0.1    30    58   629   657   616   673 0.79 AAA domain
AAA_22               PF13401.1    131 sp|O34863|UVRA_BACSU -            957   2.5e-06   27.6   0.4   2   2   4.9e-05     0.018   15.2   0.0     5    36   633   664   629   699 0.86 AAA domain
AAA_21               PF13304.1    303 sp|O34863|UVRA_BACSU -            957   2.5e-06   27.6   7.8   1   3   0.00029       0.1   12.5   0.2   220   294   467   543   348   552 0.74 AAA domain
AAA_21               PF13304.1    303 sp|O34863|UVRA_BACSU -            957   2.5e-06   27.6   7.8   3   3   0.00024     0.088   12.7   0.0   233   279   824   870   773   893 0.76 AAA domain
AAA_17               PF13207.1    121 sp|O34863|UVRA_BACSU -            957   7.7e-06   26.7   5.8   1   2    0.0027      0.99   10.2   0.3     2    16    29    43    28    44 0.93 AAA domain
AAA_17               PF13207.1    121 sp|O34863|UVRA_BACSU -            957   7.7e-06   26.7   5.8   2   2   4.9e-05     0.018   15.8   0.0     3    32   636   688   635   776 0.63 AAA domain
AAA_33               PF13671.1    143 sp|O34863|UVRA_BACSU -            957   8.1e-06   25.7   0.0   3   3   0.00096      0.35   10.7   0.0     4    22   637   655   634   715 0.88 AAA domain
AAA_10               PF12846.2    304 sp|O34863|UVRA_BACSU -            957   1.1e-05   25.0   0.0   2   2   1.7e-05    0.0061   16.0   0.0     4    29   635   660   632   730 0.84 AAA-like domain
AAA_18               PF13238.1    129 sp|O34863|UVRA_BACSU -            957   4.8e-05   23.6   0.0   2   2   0.00027     0.098   12.9   0.0     2    38   636   673   636   723 0.70 AAA domain
DnaJ_CXXCXGXG        PF00684.14    66 sp|O34863|UVRA_BACSU -            957   5.6e-05   23.0   7.0   4   4   7.9e-05     0.029   14.4   0.3    16    52   736   769   725   774 0.84 DnaJ central domain
AAA_14               PF13173.1    128 sp|O34863|UVRA_BACSU -            957   9.5e-05   22.3   0.0   2   2    0.0012      0.44   10.4   0.0     5    27   635   657   632   690 0.85 AAA domain
MMR_HSR1             PF01926.18   116 sp|O34863|UVRA_BACSU -            957   0.00012   22.0   0.0   2   2   5.6e-05      0.02   14.8   0.0     3    38   636   675   634   713 0.78 50S ribosome-binding GTPase
AAA_23               PF13476.1    202 sp|O34863|UVRA_BACSU -            957   0.00017   22.0   0.9   1   2   0.00075      0.27   11.5   0.0     1    35     5    42     5    48 0.84 AAA domain
MobB                 PF03205.9    140 sp|O34863|UVRA_BACSU -            957   0.00025   20.7   0.6   2   2   5.5e-05      0.02   14.6   0.2     4    35   636   667   633   679 0.86 Molybdopterin guanine dinucleotide synthesis protein B
Arch_ATPase          PF01637.13   234 sp|O34863|UVRA_BACSU -            957   0.00028   20.6   0.0   2   2   0.00058      0.21   11.2   0.0    21    75   633   683   619   722 0.75 Archaeal ATPase
BCA_ABC_TP_C         PF12399.3     23 sp|O34863|UVRA_BACSU -            957   0.00034   20.2   2.5   1   2   0.00031      0.11   12.1   0.1     1    15   570   584   570   585 0.95 Branched-chain amino acid ATP-binding cassette transporter
NACHT                PF05729.7    166 sp|O34863|UVRA_BACSU -            957   0.00059   19.5   0.3   2   2   0.00024     0.087   12.4   0.2     4    31   636   663   633   667 0.87 NACHT domain
KaiC                 PF06745.8    227 sp|O34863|UVRA_BACSU -            957    0.0012   18.0   0.8   2   2    0.0018      0.65    9.0   0.1    15    42   628   655   621   661 0.84 KaiC
Viral_helicase1      PF01443.13   234 sp|O34863|UVRA_BACSU -            957    0.0018   17.8   0.2   2   2   0.00016     0.058   12.9   0.2     2    22   636   656   635   680 0.80 Viral (Superfamily 1) RNA helicase
DUF2075              PF09848.4    352 sp|O34863|UVRA_BACSU -            957     0.002   17.1   0.1   2   2    0.0023      0.82    8.5   0.1     4    30   635   660   632   687 0.74 Uncharacterized conserved protein (DUF2075)
cobW                 PF02492.14   178 sp|O34863|UVRA_BACSU -            957    0.0031   16.9   0.6   2   2   0.00027     0.097   12.1   0.2     3    24   635   655   633   665 0.81 CobW/HypB/UreG, nucleotide-binding domain
ArgK                 PF03308.11   267 sp|O34863|UVRA_BACSU -            957    0.0043   15.8   0.1   2   2   0.00099      0.36    9.5   0.0    19    53   622   656   611   665 0.75 ArgK protein
PRK                  PF00485.13   194 sp|O34863|UVRA_BACSU -            957    0.0089   15.5   0.1   2   2    0.0019      0.68    9.4   0.0     3    50   636   688   634   730 0.68 Phosphoribulokinase / Uridine kinase family
DUF87                PF01935.12   229 sp|O34863|UVRA_BACSU -            957     0.021   14.6   1.7   1   1   0.00028       0.1   12.4   0.2    26    50   635   659   628   669 0.87 Domain of unknown function DUF87
DAP3                 PF10236.4    309 sp|O34863|UVRA_BACSU -            957     0.073   11.9   0.1   2   2    0.0024      0.88    8.4   0.1    28    51   637   660   625   661 0.94 Mitochondrial ribosomal death-associated protein 3
FtsK_SpoIIIE         PF01580.13   205 sp|O34863|UVRA_BACSU -            957     0.078   12.4   0.2   1   1    0.0022      0.81    9.1   0.0    41    65   635   659   605   683 0.87 FtsK/SpoIIIE family
NB-ARC               PF00931.17   287 sp|O34863|UVRA_BACSU -            957     0.087   11.6   0.1   2   2    0.0027      0.99    8.1   0.1    21    43   634   656   619   663 0.85 NB-ARC domain
Septin               PF00735.13   281 sp|O34863|UVRA_BACSU -            957      0.11   11.4   0.5   1   1     0.001      0.37    9.7   0.0     9    43   637   671   632   690 0.73 Septin
NTPase_1             PF03266.10   168 sp|O34863|UVRA_BACSU -            957      0.24   11.0   7.4   2   2    0.0015      0.56    9.9   0.1     3    23   636   656   634   664 0.84 NTPase
UvrB                 PF12344.3     44 sp|P37954|UVRB_BACSU -            661   5.8e-22   76.9   4.2   1   1     9e-25   5.8e-22   76.9   4.2     1    44   551   594   551   594 0.99 Ultra-violet resistance protein B
Helicase_C           PF00271.26    78 sp|P37954|UVRB_BACSU -            661   3.7e-19   68.3   1.6   1   2   5.2e-20   3.4e-17   62.0   0.0     2    77   464   544   463   545 0.98 Helicase conserved C-terminal domain
ResIII               PF04851.10   184 sp|P37954|UVRB_BACSU -            661   3.9e-13   49.6   6.5   1   2   1.9e-15   1.3e-12   47.9   0.1     3   109    12   116    10   132 0.80 Type III restriction enzyme, res subunit
UVR                  PF02151.14    36 sp|P37954|UVRB_BACSU -            661   5.9e-09   35.1   7.0   1   1   9.2e-12   5.9e-09   35.1   7.0     2    35   626   659   625   660 0.95 UvrB/uvrC motif
DEAD                 PF00270.24   169 sp|P37954|UVRB_BACSU -            661   8.4e-05   22.1   0.2   1   1   2.3e-06    0.0015   18.0   0.0     9    72    22    85    15   130 0.78 DEAD/DEAH box helicase
DUF87                PF01935.12   229 sp|P37954|UVRB_BACSU -            661    0.0038   17.0   0.2   1   1   5.9e-06    0.0038   17.0   0.2    24    51    33    59    29    67 0.88 Domain of unknown function DUF87
AAA                  PF00004.24   132 sp|P37954|UVRB_BACSU -            661    0.0056   16.8   1.1   1   1   5.8e-05     0.037   14.2   0.0     3    96    37   168    35   189 0.76 ATPase family associated with various cellular activities (AAA)
TrwB_AAD_bind        PF10412.4    386 sp|P37954|UVRB_BACSU -            661     0.012   14.3   0.3   1   1   6.4e-05     0.041   12.4   0.1    13    41    30    58    19    79 0.83 Type IV secretion-system coupling protein DNA-binding domain
T2SE                 PF00437.15   272 sp|P37954|UVRB_BACSU -            661     0.014   14.2   1.6   1   2   6.7e-05     0.043   12.7   0.1   105   155     9    59     2    65 0.82 Type II/IV secretion system protein
Kinesin              PF00225.18   335 sp|P37954|UVRB_BACSU -            661     0.043   12.5   0.1   1   1   6.7e-05     0.043   12.5   0.1    61   137    19    97     4   102 0.63 Kinesin motor domain
AAA_5                PF07728.9    139 sp|P37954|UVRB_BACSU -            661     0.054   13.2   0.2   1   1    0.0005      0.32   10.7   0.1     4    35    37    68    34   132 0.83 AAA domain (dynein-related subfamily)
AAA_19               PF13245.1     76 sp|P37954|UVRB_BACSU -            661     0.062   13.0   0.0   1   1   0.00053      0.34   10.6   0.0    15    55    37    70    21    86 0.78 Part of AAA domain
AAA_25               PF13481.1    194 sp|P37954|UVRB_BACSU -            661       0.1   11.9   0.0   1   1   0.00047      0.31   10.4   0.0    18    57    17    56     2    75 0.84 AAA domain
ATP-synt_ab          PF00006.20   215 sp|P37954|UVRB_BACSU -            661      0.12   11.8   0.0   1   1   0.00096      0.62    9.5   0.0    18    49    35   450    23   607 0.65 ATP synthase alpha/beta family, nucleotide-binding domain
FtsK_SpoIIIE         PF01580.13   205 sp|P37954|UVRB_BACSU -            661      0.16   11.4   1.9   1   2    0.0014      0.92    8.9   0.1    37    62    31    56    14    62 0.80 FtsK/SpoIIIE family
AAA_22               PF13401.1    131 sp|P37954|UVRB_BACSU -            661       1.5    8.9   5.1   1   1    0.0012      0.75    9.9   0.2     2    29    30    57    28   139 0.84 AAA domain
UvrC_HhH_N           PF08459.6    155 sp|P14951|UVRC_BACSU -            590   3.9e-59  198.6   0.0   1   1   4.8e-62   7.9e-59  197.6   0.0     2   155   370   523   369   523 0.97 UvrC Helix-hairpin-helix N-terminal
UVR                  PF02151.14    36 sp|P14951|UVRC_BACSU -            590   1.9e-11   43.1   4.5   1   1   1.1e-14   1.9e-11   43.1   4.5     2    34   197   229   196   231 0.94 UvrB/uvrC motif
GIY-YIG              PF01541.19    80 sp|P14951|UVRC_BACSU -            590   6.2e-10   39.3   0.1   1   1   1.2e-12     2e-09   37.6   0.1     2    80    16    90    15    90 0.83 GIY-YIG catalytic domain
HHH_5                PF14520.1     60 sp|P14951|UVRC_BACSU -            590   0.00012   22.1   0.1   1   1   2.4e-07    0.0004   20.5   0.1     7    57   539   587   532   590 0.86 Helix-hairpin-helix domain
HHH_2                PF12826.2     64 sp|P14951|UVRC_BACSU -            590   0.00085   19.1   0.0   1   1   1.5e-06    0.0025   17.6   0.0     8    38   542   572   539   582 0.95 Helix-hairpin-helix motif
5_3_exonuc           PF01367.15   101 sp|P14951|UVRC_BACSU -            590    0.0045   17.2   0.0   1   1   2.7e-06    0.0045   17.2   0.0    23    55   542   575   539   588 0.86 5'-3' exonuclease, C-terminal SAM fold
ADPrib_exo_Tox       PF03496.9    190 sp|P14951|UVRC_BACSU -            590     0.028   13.6   0.0   1   1   3.2e-05     0.053   12.7   0.0    10    73   173   240   169   300 0.83 ADP-ribosyltransferase exoenzyme
Histone_HNS          PF00816.16    93 sp|P14951|UVRC_BACSU -            590     0.042   14.3   1.5   1   1   7.5e-05      0.12   12.8   1.5     1    45   200   243   200   255 0.91 H-NS histone family
GlutR_N              PF05201.10   152 sp|P14951|UVRC_BACSU -            590     0.066   12.8   0.0   1   1   0.00012      0.19   11.2   0.0     3    55   339   388   337   422 0.77 Glutamyl-tRNAGlu reductase, N-terminal domain
IMS                  PF00817.15   149 sp|O31990|UVRX_BACSU -            416   3.9e-27   94.8   0.0   1   2   6.8e-30     2e-26   92.5   0.0     1   148    15   160    15   161 0.89 impB/mucB/samB family
IMS_C                PF11799.3    127 sp|O31990|UVRX_BACSU -            416   7.4e-19   67.9   0.1   1   1   4.6e-22   1.4e-18   67.0   0.1    13   127   255   366   252   366 0.93 impB/mucB/samB family C-terminal domain
IMS_HHH              PF11798.3     32 sp|O31990|UVRX_BACSU -            416   1.2e-08   34.4   0.1   1   1   1.1e-11   3.1e-08   33.1   0.1     1    32   176   208   176   208 0.97 IMS family HHH motif
HHH_5                PF14520.1     60 sp|O31990|UVRX_BACSU -            416   0.00029   20.9   0.0   1   1   2.3e-07   0.00067   19.7   0.0     6    46   188   228   184   257 0.94 Helix-hairpin-helix domain
Serpulina_VSP        PF05540.6    377 sp|O31990|UVRX_BACSU -            416      0.13   11.0   0.0   1   1   5.4e-05      0.16   10.6   0.0    78   128   288   339   224   387 0.72 Serpulina hyodysenteriae variable surface protein
UvdE                 PF03851.9    276 sp|P45864|UVSE_BACSU -            320  7.9e-123  408.8   0.4   1   1  1.2e-126  9.2e-123  408.6   0.4     1   275     5   274     5   275 0.99 UV-endonuclease UvdE
AP_endonuc_2         PF01261.19   213 sp|P45864|UVSE_BACSU -            320   6.8e-06   25.5   0.0   1   1   1.9e-09   1.4e-05   24.4   0.0    22   186    83   233    71   237 0.78 Xylose isomerase-like TIM barrel
GD_AH_C              PF04295.8    397 sp|O34673|UXAA_BACSU -            497  2.3e-155  517.1   0.0   1   1  3.6e-159  2.6e-155  516.9   0.0     2   397   106   497   105   497 0.99 D-galactarate dehydratase / Altronate hydrolase, C terminus
SAF                  PF08666.7     63 sp|O34673|UXAA_BACSU -            497   4.2e-15   55.9   0.3   1   2   1.2e-17   9.2e-14   51.5   0.2     1    62    11    81    11    82 0.98 SAF domain
Mannitol_dh_C        PF08125.8    245 sp|O34354|UXAB_BACSU -            480   1.3e-50  171.9   0.0   1   1   2.4e-54   1.8e-50  171.4   0.0     2   242   204   446   203   449 0.84 Mannitol dehydrogenase C-terminal domain
Mannitol_dh          PF01232.18   151 sp|O34354|UXAB_BACSU -            480   4.8e-19   68.8   0.0   1   1   1.4e-22     1e-18   67.7   0.0     2   150    18   172    17   173 0.89 Mannitol dehydrogenase Rossmann domain
UxaC                 PF02614.9    462 sp|O34808|UXAC_BACSU -            473  1.2e-205  683.5   0.0   1   1  8.9e-210  1.3e-205  683.3   0.0     1   462     1   464     1   464 1.00 Glucuronate isomerase
UxuA                 PF03786.8    351 sp|O34346|UXUA_BACSU -            359  8.4e-161  534.3   0.0   1   1  1.3e-164  9.6e-161  534.1   0.0     1   350     1   350     1   351 0.99 D-mannonate dehydratase (UxuA)
AP_endonuc_2         PF01261.19   213 sp|O34346|UXUA_BACSU -            359   9.8e-06   24.9   0.0   1   1   2.2e-09   1.6e-05   24.2   0.0    21   134    37   209    17   227 0.86 Xylose isomerase-like TIM barrel
adh_short            PF00106.20   167 sp|O34896|UXUB_BACSU -            278   1.4e-25   90.1   8.3   1   1     2e-27   1.9e-24   86.4   8.3     1   164    11   190    11   193 0.90 short chain dehydrogenase
adh_short_C2         PF13561.1    241 sp|O34896|UXUB_BACSU -            278   1.2e-15   57.9   0.0   1   1   2.6e-18   2.4e-15   56.9   0.0    10   240    24   272    18   273 0.86 Enoyl-(Acyl carrier protein) reductase
KR                   PF08659.5    181 sp|O34896|UXUB_BACSU -            278   8.5e-10   38.5   6.7   1   1   7.4e-11   6.9e-08   32.3   6.7     2   162    12   187    11   208 0.77 KR domain
Shikimate_DH         PF01488.15   135 sp|O34896|UXUB_BACSU -            278     4e-05   23.7   1.3   1   1   8.5e-08   7.9e-05   22.7   1.3     8    60     6    58     3   122 0.80 Shikimate / quinate 5-dehydrogenase
NAD_binding_2        PF03446.10   163 sp|O34896|UXUB_BACSU -            278   0.00033   20.5   0.2   1   1   6.4e-07   0.00059   19.7   0.2     8    54    18    68    11    93 0.80 NAD binding domain of 6-phosphogluconate dehydrogenase
Saccharop_dh         PF03435.13   386 sp|O34896|UXUB_BACSU -            278   0.00063   18.8   0.4   1   1   1.1e-06    0.0011   18.0   0.4     5    74    18    94    14   104 0.76 Saccharopine dehydrogenase
Epimerase            PF01370.16   236 sp|O34896|UXUB_BACSU -            278    0.0014   18.0   0.6   1   1     4e-06    0.0037   16.7   0.6     2    92    14   112    13   199 0.76 NAD dependent epimerase/dehydratase family
NmrA                 PF05368.8    233 sp|O34896|UXUB_BACSU -            278    0.0069   15.6   0.4   1   1   1.2e-05     0.011   15.0   0.4     2    61    14    77    13    90 0.86 NmrA-like family
NAD_binding_10       PF13460.1    183 sp|O34896|UXUB_BACSU -            278     0.011   15.7   0.5   1   2   5.9e-05     0.055   13.4   0.4     2    55    14    61    14   115 0.78 NADH(P)-binding
THF_DHG_CYH_C        PF02882.14   161 sp|O34896|UXUB_BACSU -            278     0.015   14.3   0.2   1   1   2.8e-05     0.026   13.5   0.2    32    95     6    66     3    73 0.84 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain
F420_oxidored        PF03807.12    96 sp|O34896|UXUB_BACSU -            278     0.021   15.2   0.7   1   1   4.5e-05     0.042   14.2   0.7     2    56    12    62    11    71 0.80 NADP oxidoreductase coenzyme F420-dependent
Oxidored_nitro       PF00148.14   398 sp|O34896|UXUB_BACSU -            278     0.023   13.3   0.1   1   1   3.5e-05     0.032   12.8   0.1   262   337     1    81     1   104 0.70 Nitrogenase component 1 type Oxidoreductase
His_biosynth         PF00977.16   229 sp|O34896|UXUB_BACSU -            278     0.065   12.4   0.0   1   1   8.8e-05     0.082   12.1   0.0    73   133    12    76     1   139 0.72 Histidine biosynthesis protein
2-Hacid_dh_C         PF02826.14   178 sp|O34896|UXUB_BACSU -            278     0.071   12.2   0.1   1   1   0.00014      0.13   11.4   0.1    32    79     6    53     2    74 0.78 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain
3Beta_HSD            PF01073.14   280 sp|O34896|UXUB_BACSU -            278      0.11   11.1   0.1   1   1   0.00016      0.15   10.7   0.1     1    67    14    81    14   107 0.79 3-beta hydroxysteroid dehydrogenase/isomerase family
3HCDH_N              PF02737.13   180 sp|O34896|UXUB_BACSU -            278      0.12   12.0   1.7   1   1   0.00018      0.17   11.5   1.0     6    44    18    56    11    92 0.75 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain
RHS_repeat           PF05593.9     38 sp|Q07833|WAPA_BACSU -           2334     3e-69  228.0  71.8   1  20   1.4e-06    0.0042   17.2   0.0     5    37  1015  1047  1015  1048 0.87 RHS Repeat
RHS_repeat           PF05593.9     38 sp|Q07833|WAPA_BACSU -           2334     3e-69  228.0  71.8   2  20   1.8e-11   5.4e-08   32.8   0.0     1    34  1032  1065  1032  1069 0.96 RHS Repeat
RHS_repeat           PF05593.9     38 sp|Q07833|WAPA_BACSU -           2334     3e-69  228.0  71.8   3  20   5.3e-08   0.00016   21.7   1.3     3    31  1075  1103  1072  1110 0.87 RHS Repeat
RHS_repeat           PF05593.9     38 sp|Q07833|WAPA_BACSU -           2334     3e-69  228.0  71.8   4  20   2.2e-05     0.065   13.4   0.0     8    36  1147  1176  1140  1178 0.77 RHS Repeat
RHS_repeat           PF05593.9     38 sp|Q07833|WAPA_BACSU -           2334     3e-69  228.0  71.8   5  20   2.1e-05     0.062   13.5   0.2    14    37  1201  1225  1199  1227 0.90 RHS Repeat
RHS_repeat           PF05593.9     38 sp|Q07833|WAPA_BACSU -           2334     3e-69  228.0  71.8   6  20     2e-07   0.00059   19.9   0.2     1    37  1210  1245  1210  1247 0.96 RHS Repeat
RHS_repeat           PF05593.9     38 sp|Q07833|WAPA_BACSU -           2334     3e-69  228.0  71.8   7  20   6.9e-07     0.002   18.2   0.9     1    37  1614  1651  1614  1652 0.97 RHS Repeat
RHS_repeat           PF05593.9     38 sp|Q07833|WAPA_BACSU -           2334     3e-69  228.0  71.8   8  20   5.5e-08   0.00016   21.7   3.3     1    36  1636  1671  1636  1673 0.91 RHS Repeat
RHS_repeat           PF05593.9     38 sp|Q07833|WAPA_BACSU -           2334     3e-69  228.0  71.8   9  20   7.1e-07    0.0021   18.1   0.0     1    37  1678  1716  1678  1717 0.95 RHS Repeat
RHS_repeat           PF05593.9     38 sp|Q07833|WAPA_BACSU -           2334     3e-69  228.0  71.8  10  20   1.5e-05     0.046   13.9   0.0     1    28  1722  1749  1722  1757 0.92 RHS Repeat
RHS_repeat           PF05593.9     38 sp|Q07833|WAPA_BACSU -           2334     3e-69  228.0  71.8  11  20   4.7e-05      0.14   12.3   0.4     1    33  1743  1775  1743  1785 0.90 RHS Repeat
RHS_repeat           PF05593.9     38 sp|Q07833|WAPA_BACSU -           2334     3e-69  228.0  71.8  12  20   6.5e-06     0.019   15.1   0.2     1    37  1764  1801  1764  1803 0.91 RHS Repeat
RHS_repeat           PF05593.9     38 sp|Q07833|WAPA_BACSU -           2334     3e-69  228.0  71.8  13  20   0.00033      0.98    9.6   0.2     4    22  1789  1806  1786  1809 0.85 RHS Repeat
RHS_repeat           PF05593.9     38 sp|Q07833|WAPA_BACSU -           2334     3e-69  228.0  71.8  14  20   9.4e-05      0.28   11.4   0.0     1    32  1851  1882  1851  1889 0.84 RHS Repeat
RHS_repeat           PF05593.9     38 sp|Q07833|WAPA_BACSU -           2334     3e-69  228.0  71.8  15  20   9.3e-05      0.27   11.4   0.1    18    36  1893  1913  1887  1915 0.80 RHS Repeat
RHS_repeat           PF05593.9     38 sp|Q07833|WAPA_BACSU -           2334     3e-69  228.0  71.8  16  20   1.8e-07   0.00053   20.0   0.1     1    38  1898  1935  1898  1935 0.96 RHS Repeat
RHS_repeat           PF05593.9     38 sp|Q07833|WAPA_BACSU -           2334     3e-69  228.0  71.8  17  20   3.7e-07    0.0011   19.0   0.1     5    35  1923  1956  1919  1959 0.83 RHS Repeat
RHS_repeat           PF05593.9     38 sp|Q07833|WAPA_BACSU -           2334     3e-69  228.0  71.8  18  20   6.1e-06     0.018   15.1   0.2     1    32  1980  2006  1980  2009 0.95 RHS Repeat
RHS_repeat           PF05593.9     38 sp|Q07833|WAPA_BACSU -           2334     3e-69  228.0  71.8  19  20   3.1e-05     0.093   12.9   1.9     2    33  2040  2073  2019  2077 0.73 RHS Repeat
RHS_repeat           PF05593.9     38 sp|Q07833|WAPA_BACSU -           2334     3e-69  228.0  71.8  20  20     8e-10   2.4e-06   27.5   0.0     1    31  2082  2113  2082  2128 0.91 RHS Repeat
TGFb_propeptide      PF00688.13   240 sp|Q07833|WAPA_BACSU -           2334    0.0015   17.8   0.0   1   1     1e-06     0.003   16.8   0.0   111   204   366   459   353   483 0.77 TGF-beta propeptide
DUF3471              PF11954.3    100 sp|Q07833|WAPA_BACSU -           2334     0.011   15.5   1.5   1   1     4e-05      0.12   12.2   0.1    33    99  1011  1082   977  1083 0.85 Domain of unknown function (DUF3471)
RHS                  PF03527.9     41 sp|Q07833|WAPA_BACSU -           2334       3.3    7.5   9.6   2   2    0.0002      0.61    9.9   0.2     2    36  2078  2112  2078  2117 0.87 RHS protein
LAGLIDADG_WhiA       PF14527.1     93 sp|O06975|WHIA_BACSU -            316   3.9e-38  129.2   5.1   2   2   3.4e-40   7.1e-37  125.1   0.1     2    93   125   217   124   217 0.99 WhiA LAGLIDADG-like domain
WhiA_N               PF10298.4     86 sp|O06975|WHIA_BACSU -            316   6.1e-36  122.1   2.0   1   1   2.9e-39   6.1e-36  122.1   2.0     1    86    18   103    18   103 0.99 WhiA N-terminal LAGLIDADG-like domain
HTH_WhiA             PF02650.9     85 sp|O06975|WHIA_BACSU -            316   7.3e-35  119.2   3.2   2   2   4.3e-38     9e-35  118.9   0.6     1    85   220   305   220   305 0.99 WhiA C-terminal HTH domain
LAGLIDADG_3          PF14528.1     77 sp|O06975|WHIA_BACSU -            316   8.7e-05   22.6   2.9   3   3   6.4e-06     0.013   15.6   0.1     1    77   125   199   125   199 0.88 LAGLIDADG-like domain
Sigma70_r4           PF04545.11    50 sp|O06975|WHIA_BACSU -            316    0.0018   17.5   0.5   1   1   2.8e-06    0.0059   15.8   0.2     2    29   254   282   253   286 0.95 Sigma-70, region 4
Ribosomal_L14        PF00238.14   122 sp|O06975|WHIA_BACSU -            316     0.014   15.1   0.2   1   1   1.3e-05     0.028   14.1   0.2    52   113    62   124    41   132 0.79 Ribosomal protein L14p/L23e
DUF3486              PF11985.3    180 sp|O06975|WHIA_BACSU -            316     0.052   13.6   0.1   1   1   5.1e-05      0.11   12.5   0.1     8    69   255   310   251   314 0.83 Protein of unknown function (DUF3486)
Peptidase_S8         PF00082.17   282 sp|P54423|WPRA_BACSU -            894   7.6e-56  189.3   5.0   1   1   1.5e-59   7.6e-56  189.3   5.0     2   281   458   729   457   730 0.94 Subtilase family
CarboxypepD_reg      PF13620.1     82 sp|P54423|WPRA_BACSU -            894     0.058   13.4   2.4   2   2   5.2e-05      0.26   11.3   0.3    10    65   830   886   823   894 0.72 Carboxypeptidase regulatory-like domain
DUF4369              PF14289.1    106 sp|P54423|WPRA_BACSU -            894      0.08   12.9   6.7   2   2   2.3e-05      0.11   12.4   1.1    19    80   829   894   822   894 0.82 Domain of unknown function (DUF4369)
Ald_Xan_dh_C2        PF02738.13   547 sp|O32144|XDHD_BACSU -            745  6.4e-161  536.3   0.0   1   1  1.7e-164  8.2e-161  536.0   0.0     4   547   136   677   131   677 0.97 Molybdopterin-binding domain of aldehyde dehydrogenase
Ald_Xan_dh_C         PF01315.17   111 sp|O32144|XDHD_BACSU -            745   1.7e-35  121.4   0.1   1   1   6.5e-39   3.2e-35  120.5   0.1     1   111    18   124    18   124 0.95 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain
Phage_integrase      PF00589.17   173 sp|P39776|XERC_BACSU -            304   1.1e-53  181.5   0.1   2   2   2.5e-56   7.4e-53  178.7   0.1     1   172   112   287   112   288 0.98 Phage integrase family
Phage_int_SAM_1      PF02899.12    84 sp|P39776|XERC_BACSU -            304   1.1e-21   76.7   1.2   1   2   5.4e-24   1.6e-20   73.0   0.5     2    84     9    91     8    91 0.98 Phage integrase, N-terminal SAM-like domain
Phage_int_SAM_4      PF13495.1     85 sp|P39776|XERC_BACSU -            304     4e-09   36.6   0.5   1   1   9.1e-12   2.7e-08   34.0   0.8     5    83    11    92     7    94 0.88 Phage integrase, N-terminal SAM-like domain
Phage_integrase      PF00589.17   173 sp|P46352|XERD_BACSU -            296   1.9e-54  183.9   0.2   1   1   1.3e-57   3.1e-54  183.2   0.2     1   172   110   283   110   284 0.98 Phage integrase family
Phage_int_SAM_1      PF02899.12    84 sp|P46352|XERD_BACSU -            296   3.3e-23   81.6   1.8   1   2   3.5e-26   8.7e-23   80.2   0.6     1    84     5    89     5    89 0.98 Phage integrase, N-terminal SAM-like domain
Phage_int_SAM_4      PF13495.1     85 sp|P46352|XERD_BACSU -            296   1.9e-06   28.0   1.9   1   2   2.3e-09   5.8e-06   26.5   0.5     4    84     7    91     4    92 0.86 Phage integrase, N-terminal SAM-like domain
Integrase_1          PF12835.2    187 sp|P46352|XERD_BACSU -            296   0.00068   19.4   1.2   1   1   6.8e-07    0.0017   18.1   1.0    35   158   136   256    99   280 0.75 Integrase
DUF3435              PF11917.3    418 sp|P46352|XERD_BACSU -            296    0.0043   15.8   0.2   2   2   5.4e-06     0.013   14.2   0.1   169   253   213   294   200   296 0.81 Protein of unknown function (DUF3435)
Phage_int_SAM_2      PF12834.2     91 sp|P46352|XERD_BACSU -            296    0.0061   16.9   1.0   1   3   6.8e-05      0.17   12.3   0.3    15    90    16    90     1    91 0.84 Phage integrase, N-terminal
Phage_holin          PF04688.8     47 sp|Q99163|XHLB_BACSU -             87   6.7e-24   83.1   0.0   2   2   9.1e-28   6.7e-24   83.1   0.0     1    47    28    81    28    81 0.98 Phage lysis protein, holin
YrhK                 PF14145.1     59 sp|Q99163|XHLB_BACSU -             87     0.016   14.8   0.2   1   1   2.8e-06     0.021   14.4   0.2    30    54    38    62    11    66 0.85 YrhK-like protein
Phage_portal         PF04860.7    347 sp|P54325|XKDE_BACSU -            495   2.7e-22   78.9   0.3   1   1   5.2e-26   7.8e-22   77.4   0.3    76   346   121   449    85   450 0.85 Phage portal protein
Baseplate_J          PF04865.9    243 sp|P54339|XKDT_BACSU -            348   4.8e-52  176.7   0.1   1   1   3.9e-56   5.8e-52  176.4   0.1     2   242    62   305    61   306 0.94 Baseplate J-like protein
Amidase_2            PF01510.20   132 sp|P39800|XLYA_BACSU -            297   1.3e-26   93.1   1.4   1   1     8e-30   2.4e-26   92.3   1.4     2   131    16   141    15   142 0.89 N-acetylmuramoyl-L-alanine amidase
PG_binding_1         PF01471.13    57 sp|P39800|XLYA_BACSU -            297   1.9e-17   62.9   0.1   2   2   3.2e-20   9.4e-17   60.7   0.0     1    56   230   291   230   292 0.89 Putative peptidoglycan binding domain
LysM                 PF01476.15    44 sp|P39800|XLYA_BACSU -            297   1.5e-16   59.9   0.0   1   2     2e-19   6.1e-16   58.0   0.1     1    44   161   204   161   204 0.98 LysM domain
HTH_28               PF13518.1     52 sp|P39800|XLYA_BACSU -            297     0.017   15.1   0.0   1   1   1.6e-05     0.047   13.6   0.0     9    33   163   187   161   190 0.90 Helix-turn-helix domain
HTH_23               PF13384.1     50 sp|P39800|XLYA_BACSU -            297      0.14   11.8   0.3   1   1   0.00013      0.38   10.4   0.0    15    37   164   186   161   190 0.90 Homeodomain-like domain
Amidase_2            PF01510.20   132 sp|O34391|XLYB_BACSU -            317   1.2e-22   80.3   0.3   1   1   6.3e-26   2.3e-22   79.4   0.3     5   131    21   143    18   144 0.89 N-acetylmuramoyl-L-alanine amidase
PG_binding_1         PF01471.13    57 sp|O34391|XLYB_BACSU -            317   8.1e-18   64.1   0.2   1   1   5.9e-21   2.2e-17   62.7   0.1     1    57   251   313   251   313 0.92 Putative peptidoglycan binding domain
LysM                 PF01476.15    44 sp|O34391|XLYB_BACSU -            317   9.8e-14   50.9   0.0   1   1   4.9e-17   1.8e-13   50.1   0.0     1    44   179   222   179   222 0.99 LysM domain
PG_binding_3         PF09374.5     72 sp|O34391|XLYB_BACSU -            317    0.0053   16.7   0.0   2   2   0.00014      0.53   10.3   0.0     1    28   288   311   288   316 0.89 Predicted Peptidoglycan domain
Pribosyltran         PF00156.22   125 sp|P42085|XPT_BACSU  -            194   3.4e-15   55.8   0.2   1   1   3.1e-19   4.7e-15   55.4   0.2     5   124    30   153    26   154 0.95 Phosphoribosyl transferase domain
AP_endonuc_2         PF01261.19   213 sp|P0CI80|XYLA_BACSU -            445   2.6e-31  108.5   0.5   1   1   4.4e-35   6.6e-31  107.2   0.5     6   205    90   317    84   319 0.84 Xylose isomerase-like TIM barrel
FGGY_N               PF00370.16   245 sp|P39211|XYLB_BACSU -            499   8.2e-84  280.7   0.0   1   1   2.4e-87   1.2e-83  280.2   0.0     1   245     3   246     3   246 0.99 FGGY family of carbohydrate kinases, N-terminal domain
FGGY_C               PF02782.11   198 sp|P39211|XYLB_BACSU -            499   3.9e-32  111.4   0.0   1   1   1.2e-35   5.8e-32  110.9   0.0     2   197   256   441   255   442 0.86 FGGY family of carbohydrate kinases, C-terminal domain
BcrAD_BadFG          PF01869.15   271 sp|P39211|XYLB_BACSU -            499   3.2e-06   26.6   0.2   1   2   5.1e-07    0.0025   17.1   0.0     1    90     5    98     5   105 0.86 BadF/BadG/BcrA/BcrD ATPase family
ROK                  PF00480.15   179 sp|P94490|XYLR_BACSU -            384   2.1e-65  219.9   0.3   1   1   2.4e-68   3.5e-65  219.1   0.3     1   179    84   267    84   267 0.99 ROK family
HTH_24               PF13412.1     48 sp|P94490|XYLR_BACSU -            384   2.9e-06   26.5   4.5   1   2   3.2e-09   4.8e-06   25.8   0.5     5    44    14    53    11    55 0.94 Winged helix-turn-helix DNA-binding
HTH_IclR             PF09339.5     52 sp|P94490|XYLR_BACSU -            384     0.015   14.8   0.0   1   1   2.6e-05     0.038   13.5   0.0    22    48    30    56    23    57 0.87 IclR helix-turn-helix domain
MarR                 PF01047.17    59 sp|P94490|XYLR_BACSU -            384      0.02   14.5   0.3   1   1   2.8e-05     0.042   13.5   0.3     5    46    14    55    12    56 0.90 MarR family
HTH_36               PF13730.1     55 sp|P94490|XYLR_BACSU -            384     0.023   14.7   1.5   1   1   2.1e-05     0.031   14.3   0.2     6    51    13    52    11    55 0.93 Helix-turn-helix domain
MarR_2               PF12802.2     62 sp|P94490|XYLR_BACSU -            384     0.029   14.0   0.0   1   1   3.4e-05      0.05   13.2   0.0     9    51    16    56    12    69 0.86 MarR family
DUF387               PF04079.11   159 sp|P94490|XYLR_BACSU -            384      0.06   12.7   0.0   1   1     7e-05       0.1   11.9   0.0    91   133    21    66    11    78 0.84 Putative transcriptional regulators (Ypuh-like)
TrmB                 PF01978.14    68 sp|P94490|XYLR_BACSU -            384     0.065   12.9   0.1   1   1   9.3e-05      0.14   11.9   0.1    15    55    19    59    11    71 0.90 Sugar-specific transcriptional regulator TrmB
HTH_11               PF08279.7     55 sp|P94490|XYLR_BACSU -            384     0.067   12.8   0.9   1   1   7.9e-05      0.12   12.0   0.1     3    42    15    54    13    66 0.80 HTH domain
HTH_AsnC-type        PF13404.1     42 sp|P94490|XYLR_BACSU -            384      0.11   12.0   0.1   1   1    0.0002       0.3   10.6   0.0     8    37    17    46    15    51 0.89 AsnC-type helix-turn-helix domain
Glyco_hydro_11       PF00457.12   183 sp|P18429|XYNA_BACSU -            213   1.9e-77  258.7  24.4   1   1   2.9e-81   2.2e-77  258.5  24.4     3   183    29   212    27   212 0.96 Glycosyl hydrolases family 11
DUF779               PF05610.6     95 sp|P18429|XYNA_BACSU -            213       0.1   12.6   0.0   1   1   2.6e-05      0.19   11.7   0.0    51    91    26    66     2    68 0.79 Protein of unknown function (DUF779)
Glyco_hydro_43       PF04616.9    286 sp|P94489|XYNB_BACSU -            533  5.4e-112  373.5   3.1   1   2  1.5e-115  5.4e-112  373.5   3.1     1   286     3   301     3   301 0.98 Glycosyl hydrolases family 43
DUF1349              PF07081.6    183 sp|P94489|XYNB_BACSU -            533    0.0052   16.1   0.1   1   1   2.9e-06     0.011   15.1   0.1    49   176   388   531   369   533 0.80 Protein of unknown function (DUF1349)
DUF4298              PF14131.1     90 sp|P94489|XYNB_BACSU -            533     0.033   14.0   0.2   1   1   2.2e-05      0.08   12.8   0.2    11    51   383   423   380   435 0.87 Domain of unknown function (DUF4298)
BNR_2                PF13088.1    275 sp|P94489|XYNB_BACSU -            533      0.11   11.7   0.3   1   1   6.5e-05      0.24   10.6   0.1    43   108    67   135    30   181 0.76 BNR repeat-like domain
Glyco_hydro_30       PF02055.11   496 sp|Q45070|XYNC_BACSU -            422   5.3e-12   44.6   3.1   2   3   6.2e-08   0.00046   18.5   0.2   167   235   107   174    75   205 0.85 O-Glycosyl hydrolase family 30
Glyco_hydro_30       PF02055.11   496 sp|Q45070|XYNC_BACSU -            422   5.3e-12   44.6   3.1   3   3     9e-10   6.7e-06   24.5   0.2   414   477   319   380   315   393 0.86 O-Glycosyl hydrolase family 30
Glyco_hydr_30_2      PF14587.1    384 sp|Q45070|XYNC_BACSU -            422    0.0036   16.2   0.2   1   2   4.8e-07    0.0036   16.2   0.2   139   187   128   178    94   200 0.78 O-Glycosyl hydrolase family 30
CBM_6                PF03422.10   125 sp|Q45071|XYND_BACSU -            513   3.5e-39  133.8   4.5   3   3   4.7e-43   3.5e-39  133.8   4.5     1   125   385   512   385   512 0.97 Carbohydrate binding module (family 6)
Glyco_hydro_43       PF04616.9    286 sp|Q45071|XYND_BACSU -            513   2.2e-31  109.0   1.2   1   1   4.9e-35   3.6e-31  108.3   1.1     3   285    40   361    38   362 0.83 Glycosyl hydrolases family 43
Isochorismatase      PF00857.15   174 sp|P37532|YAAI_BACSU -            181   7.9e-33  113.8   0.1   1   1   1.2e-36   9.1e-33  113.6   0.1     2   173     7   176     6   177 0.93 Isochorismatase family
PNP_UDP_1            PF01048.15   234 sp|P37532|YAAI_BACSU -            181     0.092   11.7   0.0   1   1   1.7e-05      0.12   11.2   0.0    60    82   104   126    96   165 0.77 Phosphorylase superfamily
YbaB_DNA_bd          PF02575.11    93 sp|P24281|YAAK_BACSU -            107     9e-36  121.6  11.3   1   1   6.3e-39   1.2e-35  121.2  11.3     1    93    12   104    12   104 0.99 YbaB/EbfC DNA-binding family
Bac_DNA_binding      PF00216.16    90 sp|P24281|YAAK_BACSU -            107     0.021   14.8   2.3   2   2   7.5e-05      0.14   12.2   0.2     4    51    51    98    48   102 0.93 Bacterial DNA-binding protein
DUF3138              PF11336.3    514 sp|P24281|YAAK_BACSU -            107     0.025   12.7   0.5   1   1   1.4e-05     0.027   12.6   0.5    26   105     7    92     3   106 0.69 Protein of unknown function (DUF3138)
DUF3602              PF12223.3     81 sp|P24281|YAAK_BACSU -            107     0.049   14.0   0.4   1   1   4.7e-05     0.088   13.2   0.4    35    65     2    30     2    42 0.56 Protein of unknown function (DUF3602)
Phage_int_SAM_5      PF13102.1    138 sp|P24281|YAAK_BACSU -            107      0.16   11.9   2.8   2   2   0.00023      0.43   10.5   0.0    26    72    50    96    42   103 0.90 Phage integrase SAM-like domain
RFC1                 PF08519.7    155 sp|P24281|YAAK_BACSU -            107       0.2   11.4   2.2   1   1   0.00017      0.32   10.7   2.2    57   154     9   102     3   103 0.76 Replication factor RFC1 C terminal domain
CDC37_C              PF08564.5    100 sp|P24281|YAAK_BACSU -            107      0.27   11.0   6.7   1   2   9.1e-05      0.17   11.7   3.5    34    76    12    52     6    68 0.83 Cdc37 C terminal domain
TelA                 PF05816.6    333 sp|P37535|YAAN_BACSU -            386    6e-128  426.2  33.8   1   1  9.3e-132  6.9e-128  426.0  33.8     3   332    52   383    50   384 0.98 Toxic anion resistance protein (TelA)
Gar1                 PF04410.9    155 sp|P37535|YAAN_BACSU -            386     0.063   12.7   0.2   1   2   2.5e-05      0.19   11.1   0.1    18    74    46   104    30   122 0.81 Gar1/Naf1 RNA binding region
OKR_DC_1             PF01276.15   417 sp|P37536|YAAO_BACSU -            480  1.7e-119  399.0   0.1   1   2  4.7e-114  7.7e-111  370.5   0.0     1   333     3   315     3   317 0.99 Orn/Lys/Arg decarboxylase, major domain
OKR_DC_1             PF01276.15   417 sp|P37536|YAAO_BACSU -            480  1.7e-119  399.0   0.1   2   2   2.3e-10   3.9e-07   28.9   0.0   358   416   314   362   312   363 0.94 Orn/Lys/Arg decarboxylase, major domain
OKR_DC_1_C           PF03711.10   137 sp|P37536|YAAO_BACSU -            480   3.5e-11   43.3   0.1   1   1   7.6e-14   1.3e-10   41.5   0.0    64   109   408   453   382   463 0.84 Orn/Lys/Arg decarboxylase, C-terminal domain
Aminotran_1_2        PF00155.16   363 sp|P37536|YAAO_BACSU -            480   7.1e-11   41.6   0.0   1   1   7.1e-14   1.2e-10   40.9   0.0    44   290    61   298    55   316 0.78 Aminotransferase class I and II
Aminotran_5          PF00266.14   371 sp|P37536|YAAO_BACSU -            480   1.6e-07   30.4   0.0   1   1   1.8e-10     3e-07   29.5   0.0    45   203    63   224    55   228 0.76 Aminotransferase class-V
Beta_elim_lyase      PF01212.16   290 sp|P37536|YAAO_BACSU -            480     3e-07   29.8   0.0   1   1   2.7e-10   4.5e-07   29.3   0.0    32   211    64   272    51   318 0.76 Beta-eliminating lyase
DegT_DnrJ_EryC1      PF01041.12   363 sp|P37536|YAAO_BACSU -            480   8.7e-07   28.3   0.3   1   1   9.6e-10   1.6e-06   27.4   0.3    37   150    73   195    62   199 0.80 DegT/DnrJ/EryC1/StrS aminotransferase family
Cys_Met_Meta_PP      PF01053.15   386 sp|P37536|YAAO_BACSU -            480   7.4e-06   24.4   0.0   1   1   1.3e-08   2.2e-05   22.9   0.0    65   202    71   222    63   228 0.65 Cys/Met metabolism PLP-dependent enzyme
SLA_LP_auto_ag       PF05889.8    389 sp|P37536|YAAO_BACSU -            480   2.8e-05   22.7   0.0   1   1   2.5e-08   4.1e-05   22.2   0.0    77   309    80   307    70   341 0.69 Soluble liver antigen/liver pancreas antigen (SLA/LP autoantigen)
GDC-P                PF02347.11   429 sp|P37536|YAAO_BACSU -            480      0.05   12.2   0.0   1   1   4.8e-05     0.079   11.6   0.0   194   258   142   222    66   231 0.69 Glycine cleavage system P-protein
DUF972               PF06156.8    107 sp|P37542|YABA_BACSU -            119   3.5e-40  136.6   5.7   1   1   8.3e-43     4e-40  136.4   5.7     1   107     1   114     1   114 0.93 Protein of unknown function (DUF972)
DegS                 PF05384.6    159 sp|P37542|YABA_BACSU -            119     3e-05   23.3   1.4   1   1   7.4e-08   3.5e-05   23.0   1.4    15    78     3    66     1    84 0.89 Sensor protein DegS
TSC22                PF01166.13    60 sp|P37542|YABA_BACSU -            119   0.00099   19.0   2.7   1   1   3.3e-06    0.0016   18.3   1.6    19    56    27    66    23    71 0.83 TSC-22/dip/bun family
CCDC155              PF14662.1    193 sp|P37542|YABA_BACSU -            119    0.0015   18.1   4.3   1   1   4.1e-06    0.0019   17.7   4.3     4    83     4    83     2    91 0.90 Coiled-coil region of CCDC155
Herpes_BLRF2         PF05812.7    118 sp|P37542|YABA_BACSU -            119    0.0015   18.2   1.4   1   1   4.5e-06    0.0021   17.8   1.4     5    46    31    73    28    91 0.70 Herpesvirus BLRF2 protein
Fmp27_WPPW           PF10359.4    475 sp|P37542|YABA_BACSU -            119    0.0022   16.5   1.4   1   1   5.1e-06    0.0024   16.3   1.4   173   245    11    81     4   104 0.83 RNA pol II promoter Fmp27 protein domain
DUF2205              PF10224.4     80 sp|P37542|YABA_BACSU -            119    0.0032   17.0   2.7   1   1     1e-05    0.0048   16.4   2.7    20    75    12    67     2    76 0.87 Predicted coiled-coil protein (DUF2205)
XRCC4                PF06632.7    342 sp|P37542|YABA_BACSU -            119     0.004   16.0   2.8   1   1     1e-05     0.005   15.7   2.8   139   177    31    69    24    77 0.87 DNA double-strand break repair and V(D)J recombination protein XRCC4
Myosin_tail_1        PF01576.14   859 sp|P37542|YABA_BACSU -            119    0.0056   14.4   4.3   1   1   1.3e-05    0.0062   14.3   4.3   184   247    12    75     2    88 0.89 Myosin tail
Atg14                PF10186.4    302 sp|P37542|YABA_BACSU -            119    0.0056   15.6   3.8   1   1   1.4e-05    0.0068   15.3   3.8    61   132     6    78     2    91 0.93 UV radiation resistance protein and autophagy-related subunit 14
bZIP_1               PF00170.16    64 sp|P37542|YABA_BACSU -            119      0.01   15.7   1.3   2   2   0.00032      0.15   11.9   1.0    30    63    33    66    28    67 0.82 bZIP transcription factor
ING                  PF12998.2    105 sp|P37542|YABA_BACSU -            119     0.011   16.0   2.7   1   1   5.2e-05     0.025   14.8   2.7    30    93    44   106     4   107 0.81 Inhibitor of growth proteins N-terminal histone-binding
DUF3450              PF11932.3    252 sp|P37542|YABA_BACSU -            119     0.013   14.8   3.0   1   1   2.9e-05     0.014   14.6   3.0    42   103    14    75     5    91 0.89 Protein of unknown function (DUF3450)
KLRAQ                PF10205.4    102 sp|P37542|YABA_BACSU -            119     0.018   15.0   2.8   1   1   4.9e-05     0.024   14.6   2.8    20    88     9    77     3    88 0.82 Predicted coiled-coil domain-containing protein
Herpes_UL6           PF01763.11   557 sp|P37542|YABA_BACSU -            119     0.018   13.2   0.7   1   1   4.4e-05     0.021   13.0   0.7   368   420    27    79     4   105 0.82 Herpesvirus UL6 like
TBPIP                PF07106.8    169 sp|P37542|YABA_BACSU -            119     0.021   14.3   3.3   1   1   4.8e-05     0.023   14.2   3.3    75   151     4    78     1    97 0.74 Tat binding protein 1(TBP-1)-interacting protein (TBPIP)
IncA                 PF04156.9    191 sp|P37542|YABA_BACSU -            119     0.022   14.3   5.0   1   1   6.7e-05     0.032   13.8   5.0    90   150    10    70     2    94 0.75 IncA protein
DUF1875              PF08961.5    243 sp|P37542|YABA_BACSU -            119     0.034   13.4   1.8   1   1   0.00012     0.058   12.6   1.4   124   157    13    50     3    73 0.72 Domain of unknown function (DUF1875)
Profilin             PF00235.14   121 sp|P37542|YABA_BACSU -            119     0.035   14.2   0.1   1   1   9.4e-05     0.045   13.8   0.1    31    77    65   110    53   119 0.84 Profilin
Syntaxin-6_N         PF09177.6     97 sp|P37542|YABA_BACSU -            119     0.052   13.9   1.6   1   2   0.00044      0.21   12.0   0.3    40    83     9    52     2    63 0.72 Syntaxin 6, N-terminal
DUF1664              PF07889.7    126 sp|P37542|YABA_BACSU -            119     0.065   13.0   1.6   1   1   0.00035      0.17   11.6   1.6    38    95     3    60     1    92 0.71 Protein of unknown function (DUF1664)
Nucleoporin2         PF04096.9    141 sp|P37542|YABA_BACSU -            119     0.066   13.0   1.9   1   1   0.00023      0.11   12.3   0.9    47   113     2    71     1    83 0.71 Nucleoporin autopeptidase
TMF_TATA_bd          PF12325.3    121 sp|P37542|YABA_BACSU -            119     0.093   12.4   5.5   1   1   0.00045      0.22   11.2   5.3    22    94    20    92    11    94 0.88 TATA element modulatory factor 1 TATA binding
FlxA                 PF14282.1    106 sp|P37542|YABA_BACSU -            119      0.13   12.2   9.2   1   1   0.00053      0.25   11.2   9.2    23    84    12    76     2    82 0.83 FlxA-like protein
Cep57_CLD_2          PF14197.1     69 sp|P37542|YABA_BACSU -            119      0.15   12.0   5.7   1   1    0.0007      0.33   10.9   5.4     3    62    13    72    11    81 0.88 Centrosome localisation domain of PPC89
V_ATPase_I           PF01496.14   759 sp|P37542|YABA_BACSU -            119      0.16    9.8   1.3   1   1   0.00035      0.17    9.7   1.3    76   143    10    77     2   109 0.68 V-type ATPase 116kDa subunit family
CorA                 PF01544.13   292 sp|P37542|YABA_BACSU -            119      0.18   10.7   2.5   1   1   0.00054      0.26   10.2   2.5   122   179     5    64     2    93 0.45 CorA-like Mg2+ transporter protein
TatD_DNase           PF01026.16   255 sp|P37545|YABD_BACSU -            255   1.7e-90  302.6   0.2   1   1   7.8e-94   1.9e-90  302.4   0.2     1   255     3   253     3   253 0.99 TatD related DNase
Amidohydro_2         PF04909.9    273 sp|P37545|YABD_BACSU -            255    0.0022   17.5   0.2   1   1   3.2e-05      0.08   12.4   0.2   191   273   169   254     3   254 0.74 Amidohydrolase
NAD_binding_10       PF13460.1    183 sp|P37545|YABD_BACSU -            255    0.0054   16.7   0.1   2   2   1.4e-05     0.034   14.1   0.1    35   124    27   119    21   130 0.84 NADH(P)-binding
CBS                  PF00571.23    57 sp|P37545|YABD_BACSU -            255     0.095   12.5   0.5   1   1   0.00016       0.4   10.4   0.2    14    36    14    36    13    43 0.90 CBS domain
Peptidase_U57        PF05582.7    287 sp|P37548|YABG_BACSU -            290  1.3e-133  444.4   0.7   1   1  2.9e-137  1.4e-133  444.2   0.7     1   286     3   289     3   290 0.99 YabG peptidase U57
Rab5-bind            PF09311.6    181 sp|P37548|YABG_BACSU -            290    0.0079   16.1   2.3   1   1   2.5e-06     0.013   15.4   2.3    15    69    60   114    52   116 0.93 Rabaptin-like protein
Polysacc_synt        PF01943.12   273 sp|P37555|YABM_BACSU -            532   3.5e-60  203.5  19.7   1   3   1.2e-63   3.5e-60  203.5  19.7     1   272    12   308    12   309 0.98 Polysaccharide biosynthesis protein
Polysacc_synt_C      PF14667.1    146 sp|P37555|YABM_BACSU -            532   3.2e-29  101.6  17.8   2   2   1.1e-32   3.2e-29  101.6  17.8     1   145   359   504   359   505 0.95 Polysaccharide biosynthesis C-terminal domain
MVIN                 PF03023.9    452 sp|P37555|YABM_BACSU -            532   4.3e-08   32.0  29.2   1   1   9.3e-11   2.8e-07   29.3  29.1    55   437    85   469    61   477 0.75 MviN-like protein
Polysacc_synt_3      PF13440.1    251 sp|P37555|YABM_BACSU -            532   1.6e-05   24.5  13.9   1   3   5.4e-09   1.6e-05   24.5  13.9    23   179    49   222    39   273 0.76 Polysaccharide biosynthesis protein
NVEALA               PF14055.1     65 sp|P37555|YABM_BACSU -            532      0.69    9.6   0.0   1   1   0.00023      0.69    9.6   0.0     8    32   418   441   416   445 0.84 NVEALA protein
S1                   PF00575.18    74 sp|P37560|YABR_BACSU -            128   7.7e-22   77.1   3.1   1   1   2.1e-25     1e-21   76.7   3.1     3    74     4    74     2    74 0.97 S1 RNA binding domain
S1_2                 PF13509.1     61 sp|P37560|YABR_BACSU -            128     0.011   15.6   0.8   1   2   1.6e-05     0.078   12.9   0.1     6    46    10    58     5    68 0.78 S1 domain
BPL_C                PF02237.12    48 sp|P37560|YABR_BACSU -            128      0.05   13.2   0.1   1   1   1.8e-05     0.091   12.4   0.1    13    30     7    24     2    47 0.83 Biotin protein ligase C terminal domain
PIN                  PF01850.16   121 sp|Q06754|YACL_BACSU -            366   1.2e-05   25.6   0.1   1   1   7.4e-09   2.2e-05   24.7   0.1     2   120   169   276   168   277 0.88 PIN domain
PIN_4                PF13638.1    133 sp|Q06754|YACL_BACSU -            366   0.00076   19.5   0.3   1   1   6.9e-07     0.002   18.1   0.3     2    63   169   233   168   286 0.64 PIN domain
TRAM                 PF01938.15    61 sp|Q06754|YACL_BACSU -            366   0.00081   19.1   0.6   1   1   6.4e-07    0.0019   17.9   0.6     3    51   297   346   295   352 0.90 TRAM domain
HIN                  PF02760.10   170 sp|Q06754|YACL_BACSU -            366     0.071   12.4   0.4   1   1   4.5e-05      0.13   11.5   0.4   101   156   250   306   230   313 0.87 HIN-200/IF120x domain
Colicin_V            PF02674.11   146 sp|Q06754|YACL_BACSU -            366       1.4    8.7  16.3   1   2   5.9e-05      0.18   11.6  10.5    23   115     3   101     1   104 0.80 Colicin V production protein
SpoU_methylase       PF00588.14   142 sp|Q06753|YACO_BACSU -            249   8.7e-41  139.1   0.1   2   2   3.5e-44   2.6e-40  137.5   0.0     2   142    98   238    97   238 0.97 SpoU rRNA Methylase family
SpoU_sub_bind        PF08032.7     76 sp|Q06753|YACO_BACSU -            249   2.7e-21   75.5   0.2   1   2   1.2e-24   8.7e-21   73.8   0.5     1    76     7    81     7    81 0.97 RNA 2'-O ribose methyltransferase substrate binding
GIY-YIG              PF01541.19    80 sp|O31414|YAZA_BACSU -             99   7.1e-14   51.9   1.9   1   1   9.6e-18   7.1e-14   51.9   1.9     2    77     6    76     5    80 0.94 GIY-YIG catalytic domain
T5orf172             PF10544.4    100 sp|O31414|YAZA_BACSU -             99      0.03   14.7   0.3   1   1   4.8e-06     0.036   14.4   0.3    20    70    21    75     6    96 0.77 T5orf172 domain
Abhydrolase_6        PF12697.2    228 sp|P70981|YBAC_BACSU -            318     3e-25   89.4   0.0   1   1   2.8e-28   3.5e-25   89.2   0.0     1   227    35   308    35   309 0.81 Alpha/beta hydrolase family
Abhydrolase_5        PF12695.2    145 sp|P70981|YBAC_BACSU -            318   2.3e-12   46.8   0.0   1   1   4.7e-15   5.9e-12   45.5   0.0     2   144    35   296    34   297 0.79 Alpha/beta hydrolase family
Abhydrolase_1        PF00561.15   230 sp|P70981|YBAC_BACSU -            318   1.5e-11   44.3   0.2   1   2   6.1e-10   7.6e-07   28.9   0.1     1    69    61   132    61   231 0.88 alpha/beta hydrolase fold
Abhydrolase_1        PF00561.15   230 sp|P70981|YBAC_BACSU -            318   1.5e-11   44.3   0.2   2   2   2.1e-05     0.026   14.0   0.0   171   228   251   310   217   312 0.82 alpha/beta hydrolase fold
Peptidase_S9         PF00326.16   213 sp|P70981|YBAC_BACSU -            318   8.7e-08   31.6   0.0   1   2   9.4e-08   0.00012   21.4   0.0    13    90    59   133    49   162 0.78 Prolyl oligopeptidase family
Peptidase_S15        PF02129.13   272 sp|P70981|YBAC_BACSU -            318   0.00011   21.6   0.0   1   1   1.3e-06    0.0017   17.8   0.0    54   270    57   296    18   298 0.71 X-Pro dipeptidyl-peptidase (S15 family)
Abhydrolase_2        PF02230.11   216 sp|P70981|YBAC_BACSU -            318   0.00033   20.1   0.1   1   2     3e-05     0.037   13.4   0.0    64   130    58   132    41   161 0.83 Phospholipase/Carboxylesterase
DUF2305              PF10230.4    266 sp|P70981|YBAC_BACSU -            318   0.00083   18.8   0.7   1   2   1.5e-06    0.0019   17.7   0.4     3   106    33   129    31   176 0.71 Uncharacterised conserved protein (DUF2305)
Esterase             PF00756.15   251 sp|P70981|YBAC_BACSU -            318    0.0011   18.4   0.0   1   1   1.2e-06    0.0015   17.9   0.0   101   159    95   181    59   206 0.83 Putative esterase
Hydrolase_4          PF12146.3     79 sp|P70981|YBAC_BACSU -            318     0.003   17.3   0.1   1   1   6.4e-06     0.008   16.0   0.1    34    78    51    97    25    98 0.69 Putative lysophospholipase
Abhydrolase_3        PF07859.8    211 sp|P70981|YBAC_BACSU -            318    0.0033   17.0   0.0   1   1   6.1e-06    0.0075   15.8   0.0    49    94    90   130    84   175 0.85 alpha/beta hydrolase fold
Methyltransf_11      PF08241.7     95 sp|P70976|YBAJ_BACSU -            255     8e-14   51.8   0.0   1   1   8.4e-17   1.4e-13   51.1   0.0     1    94    63   158    63   159 0.96 Methyltransferase domain
Methyltransf_31      PF13847.1    152 sp|P70976|YBAJ_BACSU -            255   3.1e-08   33.3   0.0   1   1   2.4e-11     4e-08   32.9   0.0     3   112    58   163    56   217 0.83 Methyltransferase domain
TehB                 PF03848.9    192 sp|P70976|YBAJ_BACSU -            255   1.2e-05   24.5   0.0   1   1   1.2e-08     2e-05   23.8   0.0    29   108    57   138    38   150 0.91 Tellurite resistance protein TehB
Methyltransf_25      PF13649.1    101 sp|P70976|YBAJ_BACSU -            255   5.1e-05   23.5   0.0   1   1   7.2e-08   0.00012   22.3   0.0     1   101    62   155    62   155 0.86 Methyltransferase domain
Ubie_methyltran      PF01209.13   233 sp|P70976|YBAJ_BACSU -            255   6.9e-05   22.0   0.0   1   1   7.3e-08   0.00012   21.2   0.0    46   160    57   167    44   181 0.80 ubiE/COQ5 methyltransferase family
Methyltransf_12      PF08242.7     99 sp|P70976|YBAJ_BACSU -            255   0.00012   22.4   0.0   1   1   1.4e-07   0.00024   21.5   0.0     4    99    66   157    63   157 0.87 Methyltransferase domain
Methyltransf_26      PF13659.1    117 sp|P70976|YBAJ_BACSU -            255      0.02   14.9   0.0   1   1   2.2e-05     0.036   14.0   0.0     1    79    59   133    59   159 0.85 Methyltransferase domain
MetW                 PF07021.7    193 sp|P70976|YBAJ_BACSU -            255     0.023   14.0   0.0   1   1   2.2e-05     0.036   13.4   0.0    16   135    61   187    51   193 0.68 Methionine biosynthesis protein MetW
Methyltransf_8       PF05148.10   219 sp|P70976|YBAJ_BACSU -            255     0.024   14.2   0.0   1   1   2.3e-05     0.037   13.6   0.0   118   155   120   158   105   183 0.85 Hypothetical methyltransferase
Sulfate_transp       PF00916.15   280 sp|P55189|YBAR_BACSU -            478   4.1e-73  245.8  16.1   2   2   8.3e-77   4.1e-73  245.8  16.1     1   280   105   352   105   352 0.98 Sulfate transporter family
Sulfate_tra_GLY      PF13792.1     84 sp|P55189|YBAR_BACSU -            478   3.9e-19   68.0   5.3   1   3     8e-23   3.9e-19   68.0   5.3     9    83     9    82     4    83 0.93 Sulfate transporter N-terminal domain with GLY motif
STAS                 PF01740.16   117 sp|P55189|YBAR_BACSU -            478   1.5e-07   30.8   0.0   1   1     6e-11     3e-07   29.8   0.0     9    98   398   476   391   478 0.88 STAS domain
Beta-lactamase       PF00144.19   330 sp|O05213|YBBE_BACSU -            441     5e-76  255.8   0.1   1   1   4.1e-80   6.1e-76  255.5   0.1     2   328    53   421    52   423 0.95 Beta-lactamase
DUF2309              PF10070.4    788 sp|O34688|YBCC_BACSU -            871  2.7e-284  945.2   0.8   1   1  8.3e-288  3.1e-284  945.0   0.8     2   788    30   857    29   857 0.94 Uncharacterized protein conserved in bacteria (DUF2309)
Wx5_PLAF3D7          PF09688.5    147 sp|O34688|YBCC_BACSU -            871     0.015   15.2   0.8   1   1   1.1e-05     0.042   13.8   0.8    61   111   331   382   328   392 0.92 Protein of unknown function (Wx5_PLAF3D7)
DUF3613              PF12266.3     67 sp|O34688|YBCC_BACSU -            871     0.085   12.3   0.0   1   1   7.9e-05      0.29   10.6   0.0    44    60    97   113    84   118 0.83 Protein of unknown function (DUF3613)
Pro_CA               PF00484.14   153 sp|O34823|YBCF_BACSU -            175   4.4e-15   55.9   0.0   1   1   6.8e-19   5.1e-15   55.7   0.0     2   151    10   153     9   155 0.84 Carbonic anhydrase
Translin             PF01997.11   200 sp|O34823|YBCF_BACSU -            175    0.0021   17.6   0.0   1   1   3.4e-07    0.0025   17.4   0.0    97   180    19   130     2   134 0.79 Translin family
MFS_1                PF07690.11   352 sp|O34663|YBCL_BACSU -            390   5.2e-39  133.9  63.4   1   2   9.4e-40   4.7e-36  124.2  51.7     1   319    10   311    10   318 0.87 Major Facilitator Superfamily
MFS_1                PF07690.11   352 sp|O34663|YBCL_BACSU -            390   5.2e-39  133.9  63.4   2   2   1.1e-06    0.0056   15.4   3.9   116   180   321   384   316   389 0.83 Major Facilitator Superfamily
Sugar_tr             PF00083.19   451 sp|O34663|YBCL_BACSU -            390   0.00027   19.6  24.8   1   3   5.4e-08   0.00027   19.6  24.8    49   190    43   178     7   186 0.80 Sugar (and other) transporter
Sugar_tr             PF00083.19   451 sp|O34663|YBCL_BACSU -            390   0.00027   19.6  24.8   2   3   0.00011      0.57    8.7   8.5   251   375   200   317   187   323 0.70 Sugar (and other) transporter
MFS_2                PF13347.1    428 sp|O34663|YBCL_BACSU -            390    0.0012   17.3  45.6   1   2   8.7e-06     0.043   12.2  16.6   262   365    42   141     7   156 0.84 MFS/sugar transport protein
MFS_2                PF13347.1    428 sp|O34663|YBCL_BACSU -            390    0.0012   17.3  45.6   2   2   0.00015      0.73    8.1  26.3   144   383   132   351   126   377 0.79 MFS/sugar transport protein
Pkinase              PF00069.20   260 sp|O31435|YBDM_BACSU -            256     2e-31  109.0   0.0   1   1   1.3e-34   2.7e-31  108.6   0.0     1   149    25   176    25   190 0.93 Protein kinase domain
Pkinase_Tyr          PF07714.12   259 sp|O31435|YBDM_BACSU -            256   2.3e-19   69.4   0.0   1   1   1.4e-22     3e-19   69.1   0.0     2   159    26   179    25   190 0.87 Protein tyrosine kinase
APH                  PF01636.18   239 sp|O31435|YBDM_BACSU -            256   2.4e-06   27.4   0.1   2   2   6.5e-07    0.0014   18.4   0.2   164   195   141   170   117   175 0.79 Phosphotransferase enzyme family
RIO1                 PF01163.17   189 sp|O31435|YBDM_BACSU -            256   0.00045   19.6   0.1   1   1   3.4e-07   0.00073   18.9   0.1    51   155    66   172    49   184 0.71 RIO1 family
Kinase-like          PF14531.1    289 sp|O31435|YBDM_BACSU -            256     0.025   13.5   0.4   2   2   5.1e-05      0.11   11.4   0.1   142   191   120   168    89   175 0.82 Kinase-like
Choline_kinase       PF01633.15   211 sp|O31435|YBDM_BACSU -            256     0.049   13.2   0.1   1   1   3.4e-05     0.071   12.6   0.1   129   169   130   167    57   172 0.87 Choline/ethanolamine kinase
Kdo                  PF06293.9    206 sp|O31435|YBDM_BACSU -            256     0.062   12.3   0.1   1   1   7.9e-05      0.17   10.9   0.1   115   172   121   174    61   185 0.81 Lipopolysaccharide kinase (Kdo/WaaP) family
AA_permease_2        PF13520.1    426 sp|Q45577|YBEC_BACSU -            539   5.8e-51  173.3  56.0   1   2   7.8e-55   5.8e-51  173.3  56.0     2   404     9   420     8   431 0.88 Amino acid permease
AA_permease          PF00324.16   478 sp|Q45577|YBEC_BACSU -            539   4.7e-36  124.1  54.2   1   1   6.3e-40   4.7e-36  124.1  54.2     2   460    13   474    12   482 0.83 Amino acid permease
UPF0054              PF02130.12   145 sp|P46347|YBEY_BACSU -            157   8.9e-46  154.7   0.4   1   1   1.3e-49   9.8e-46  154.6   0.4     5   144     9   152     5   153 0.89 Uncharacterized protein family UPF0054
Peptidase_M10        PF00413.19   154 sp|P46347|YBEY_BACSU -            157       0.1   12.2   0.8   1   1   3.4e-05      0.25   11.0   0.8    69   126    78   137    17   151 0.73 Matrixin
MFS_1                PF07690.11   352 sp|O31444|YBFB_BACSU -            416     5e-46  157.0  50.8   1   2   4.6e-35   2.3e-31  108.8  29.7     5   256    17   273     9   276 0.79 Major Facilitator Superfamily
MFS_1                PF07690.11   352 sp|O31444|YBFB_BACSU -            416     5e-46  157.0  50.8   2   2   1.1e-20   5.6e-17   61.4  16.7    23   177   251   404   246   414 0.90 Major Facilitator Superfamily
MFS_1_like           PF12832.2     77 sp|O31444|YBFB_BACSU -            416    0.0045   16.7   4.1   1   3   0.00012      0.59    9.9   0.1    35    69    44    78    36    85 0.87 MFS_1 like family
ATG22                PF11700.3    477 sp|O31444|YBFB_BACSU -            416     0.049   12.1  30.8   1   2     7e-06     0.035   12.5   3.8    70   146    44   119    37   126 0.79 Vacuole effluxer Atg22 like
DUF1906              PF08924.6    136 sp|O31447|YBFG_BACSU -            732   1.4e-46  157.7   2.8   1   1   3.6e-50   2.7e-46  156.8   2.8     1   136   292   433   292   433 0.96 Domain of unknown function (DUF1906)
PG_binding_1         PF01471.13    57 sp|O31447|YBFG_BACSU -            732   2.9e-25   88.0   0.1   1   3     3e-13   2.2e-09   37.1   0.1     8    57    84   134    82   134 0.95 Putative peptidoglycan binding domain
PG_binding_1         PF01471.13    57 sp|O31447|YBFG_BACSU -            732   2.9e-25   88.0   0.1   3   3   7.6e-14   5.6e-10   39.0   0.0     6    57   223   276   220   276 0.93 Putative peptidoglycan binding domain
EamA                 PF00892.15   126 sp|O31448|YBFH_BACSU -            306   1.4e-39  134.9  39.3   1   2   8.2e-27     3e-23   82.2  16.9     1   125    18   140    18   141 0.96 EamA-like transporter family
EamA                 PF00892.15   126 sp|O31448|YBFH_BACSU -            306   1.4e-39  134.9  39.3   2   2   1.1e-19   4.2e-16   59.1  14.4     2   123   163   288   162   291 0.91 EamA-like transporter family
TPT                  PF03151.11   153 sp|O31448|YBFH_BACSU -            306   5.5e-08   32.5  10.9   1   1   1.5e-11   5.5e-08   32.5  10.9     3   149   155   287   153   288 0.88 Triose-phosphate Transporter family
Imp-YgjV             PF10688.4    164 sp|O31448|YBFH_BACSU -            306    0.0014   18.0   1.6   1   2   3.8e-07    0.0014   18.0   1.6    73   133    78   138    74   152 0.90 Bacterial inner membrane protein
PrgI                 PF12666.2     93 sp|O31448|YBFH_BACSU -            306     0.032   14.3   1.8   2   5   8.6e-06     0.032   14.3   1.8    18    62    63   111    56   122 0.71 PrgI family protein
Abhydrolase_6        PF12697.2    228 sp|O31452|YBFK_BACSU -            296   6.1e-29  101.5   0.2   1   1   2.5e-32   7.3e-29  101.2   0.2     1   227    57   285    57   286 0.81 Alpha/beta hydrolase family
Abhydrolase_5        PF12695.2    145 sp|O31452|YBFK_BACSU -            296     9e-12   44.9   0.3   1   1   2.9e-14   8.7e-11   41.7   0.3     2   144    57   273    56   274 0.77 Alpha/beta hydrolase family
Abhydrolase_1        PF00561.15   230 sp|O31452|YBFK_BACSU -            296   1.3e-10   41.2   0.0   1   1   5.7e-12   1.7e-08   34.3   0.0    21   228    98   287    81   289 0.76 alpha/beta hydrolase fold
Ndr                  PF03096.9    283 sp|O31452|YBFK_BACSU -            296    0.0094   14.4   0.0   1   2    0.0001       0.3    9.5   0.0    40   133    65   155    36   171 0.81 Ndr family
Esterase             PF00756.15   251 sp|O31452|YBFK_BACSU -            296     0.014   14.8   0.0   1   1   1.2e-05     0.035   13.5   0.0   116   157   121   206   104   273 0.62 Putative esterase
SNARE_assoc          PF09335.6    123 sp|O31453|YBFM_BACSU -            162   6.3e-27   94.2   3.9   2   2   1.3e-30   6.3e-27   94.2   3.9     1   122    29   155    29   156 0.94 SNARE associated Golgi protein
DUF3112              PF11309.3    160 sp|O31453|YBFM_BACSU -            162     0.012   15.4   3.1   1   1   3.9e-06     0.019   14.7   3.1    15    90    11   131     3   160 0.76 Protein of unknown function (DUF3112)
DUF3650              PF12368.3     28 sp|O31457|YBFQ_BACSU -            322   3.3e-16   58.4   2.6   1   1   9.1e-20   6.7e-16   57.4   2.6     1    28   286   313   286   313 0.99 Protein of unknown function (DUF3650)
Rhodanese            PF00581.15   113 sp|O31457|YBFQ_BACSU -            322   5.4e-13   49.2   0.0   1   1   1.2e-16     9e-13   48.5   0.0     2   110   117   210   116   213 0.84 Rhodanese-like domain
AA_permease          PF00324.16   478 sp|O31462|YBGF_BACSU -            470  1.1e-114  383.4  43.4   1   1  1.8e-118  1.3e-114  383.1  43.4     1   473    20   461    20   465 0.96 Amino acid permease
AA_permease_2        PF13520.1    426 sp|O31462|YBGF_BACSU -            470   9.6e-43  146.2  48.9   1   1   1.7e-46   1.3e-42  145.8  48.9     5   420    20   447    17   454 0.82 Amino acid permease
MTS                  PF05175.9    170 sp|P37872|YBXB_BACSU -            201   5.7e-51  172.2   0.0   1   1   1.1e-53   6.6e-51  172.0   0.0     2   170    28   197    27   197 0.98 Methyltransferase small domain
Methyltransf_31      PF13847.1    152 sp|P37872|YBXB_BACSU -            201   3.9e-17   62.2   0.1   1   1   9.6e-20   5.7e-17   61.7   0.1     7   118    62   171    58   200 0.68 Methyltransferase domain
Methyltransf_18      PF12847.2    112 sp|P37872|YBXB_BACSU -            201   3.1e-12   47.0   0.0   1   1   7.3e-15   4.3e-12   46.5   0.0     3   109    61   162    59   196 0.85 Methyltransferase domain
Methyltransf_26      PF13659.1    117 sp|P37872|YBXB_BACSU -            201   2.9e-10   40.2   0.0   1   1   6.7e-13     4e-10   39.7   0.0     4   114    62   163    59   166 0.90 Methyltransferase domain
Methyltransf_25      PF13649.1    101 sp|P37872|YBXB_BACSU -            201   3.5e-09   36.9   0.0   1   1     1e-11   5.9e-09   36.2   0.0     1   101    62   158    62   158 0.91 Methyltransferase domain
PrmA                 PF06325.8    295 sp|P37872|YBXB_BACSU -            201   2.8e-07   29.9   0.0   1   1   5.8e-10   3.4e-07   29.6   0.0   164   292    61   198    47   201 0.65 Ribosomal protein L11 methyltransferase (PrmA)
Methyltransf_4       PF02390.12   197 sp|P37872|YBXB_BACSU -            201   1.8e-05   23.8   0.1   1   1   7.6e-08   4.5e-05   22.5   0.1    22    86    61   122    38   199 0.86 Putative methyltransferase
tRNA_U5-meth_tr      PF05958.6    352 sp|P37872|YBXB_BACSU -            201   5.2e-05   22.1   0.0   1   1   1.2e-07   7.2e-05   21.6   0.0   158   249    21   113     5   130 0.82 tRNA (Uracil-5-)-methyltransferase
UPF0020              PF01170.13   180 sp|P37872|YBXB_BACSU -            201   9.8e-05   21.9   0.0   1   1   2.1e-07   0.00012   21.6   0.0    61   162    82   177    53   195 0.79 Putative RNA methylase family UPF0020
Methyltransf_12      PF08242.7     99 sp|P37872|YBXB_BACSU -            201    0.0001   22.7   0.0   1   1   2.6e-07   0.00016   22.1   0.0     1    97    63   158    63   160 0.65 Methyltransferase domain
Met_10               PF02475.11   200 sp|P37872|YBXB_BACSU -            201    0.0001   21.9   0.0   1   1   2.2e-07   0.00013   21.6   0.0    95   189    49   147    23   163 0.79 Met-10+ like-protein
Methyltransf_11      PF08241.7     95 sp|P37872|YBXB_BACSU -            201   0.00015   22.1   0.0   1   1   1.9e-06    0.0011   19.4   0.0     1    50    63   116    63   162 0.83 Methyltransferase domain
Ubie_methyltran      PF01209.13   233 sp|P37872|YBXB_BACSU -            201   0.00061   18.9   0.0   1   1   1.2e-06   0.00074   18.6   0.0    50   107    61   117    42   181 0.83 ubiE/COQ5 methyltransferase family
FmrO                 PF07091.6    251 sp|P37872|YBXB_BACSU -            201   0.00075   18.5   0.0   1   1   1.8e-06    0.0011   18.0   0.0   107   170    60   124    46   131 0.85 Ribosomal RNA methyltransferase (FmrO)
DUF43                PF01861.11   243 sp|P37872|YBXB_BACSU -            201    0.0013   17.7   0.0   1   1   2.7e-06    0.0016   17.4   0.0    63   122    78   136    64   187 0.77 Protein of unknown function DUF43
GidB                 PF02527.10   184 sp|P37872|YBXB_BACSU -            201    0.0022   17.1   0.0   1   1   4.6e-06    0.0027   16.8   0.0    49   127    57   142    34   194 0.72 rRNA small subunit methyltransferase G
Methyltransf_16      PF10294.4    174 sp|P37872|YBXB_BACSU -            201    0.0024   17.3   0.0   1   1   6.3e-06    0.0037   16.7   0.0    49   101    61   113    41   127 0.87 Putative methyltransferase
Methyltransf_23      PF13489.1    161 sp|P37872|YBXB_BACSU -            201    0.0077   15.9   0.0   1   1   1.7e-05      0.01   15.5   0.0    23    93    59   123    43   187 0.62 Methyltransferase domain
Methyltransf_15      PF09445.5    164 sp|P37872|YBXB_BACSU -            201     0.008   15.7   0.0   1   1   1.9e-05     0.011   15.2   0.0     4    79    62   135    59   152 0.85 RNA cap guanine-N2 methyltransferase
PCMT                 PF01135.14   210 sp|P37872|YBXB_BACSU -            201     0.012   15.1   0.0   1   1   2.7e-05     0.016   14.7   0.0    77   175    62   166    56   200 0.76 Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT)
Methyltransf_32      PF13679.1    141 sp|P37872|YBXB_BACSU -            201     0.019   14.6   0.0   1   1   4.3e-05     0.025   14.2   0.0    21    77    54   106    41   155 0.80 Methyltransferase domain
SPOUT_MTase_2        PF14419.1    174 sp|P37872|YBXB_BACSU -            201     0.026   13.6   0.0   1   1   6.1e-05     0.036   13.2   0.0    67   140   100   177    88   186 0.86 AF2226-like SPOUT RNA Methylase fused to THUMP
TehB                 PF03848.9    192 sp|P37872|YBXB_BACSU -            201     0.041   13.0   0.0   1   1   9.7e-05     0.058   12.5   0.0    32    85    60   116    55   165 0.83 Tellurite resistance protein TehB
CMAS                 PF02353.15   273 sp|P37872|YBXB_BACSU -            201     0.091   11.8   0.0   1   1    0.0002      0.12   11.4   0.0    66   162    62   160    53   186 0.68 Mycolic acid cyclopropane synthetase
TrkA_N               PF02254.13   116 sp|P37872|YBXB_BACSU -            201      0.11   12.5   0.1   1   1   0.00051       0.3   11.0   0.0     4    39    67   100    66   131 0.83 TrkA-N domain
AA_permease          PF00324.16   478 sp|P54425|YBXG_BACSU -            462    3e-105  352.3  55.7   1   1  5.1e-109  3.7e-105  352.0  55.7     1   455    14   431    14   458 0.94 Amino acid permease
AA_permease_2        PF13520.1    426 sp|P54425|YBXG_BACSU -            462   2.7e-42  144.8  63.3   1   1   4.4e-46   3.3e-42  144.5  63.3     8   425    17   436    10   439 0.90 Amino acid permease
Transpeptidase       PF00905.17   304 sp|P54427|YBXI_BACSU -            267     4e-37  127.8   0.2   1   1   7.4e-41   5.5e-37  127.4   0.2    26   292    47   251    23   261 0.86 Penicillin binding protein transpeptidase domain
Bac_export_2         PF01312.14   343 sp|P54427|YBXI_BACSU -            267    0.0099   14.8   0.0   1   1   1.9e-06     0.014   14.3   0.0   186   264     3    82     1    85 0.85 FlhB HrpN YscU SpaS Family
APH                  PF01636.18   239 sp|P42242|YCBJ_BACSU -            306   2.4e-27   96.2   2.0   1   1   2.1e-31   3.1e-27   95.8   2.0     7   238    34   268    29   269 0.91 Phosphotransferase enzyme family
EamA                 PF00892.15   126 sp|P42243|YCBK_BACSU -            312   5.3e-27   94.3  22.2   1   3   1.1e-10   8.1e-07   29.1   1.8     2   125    25   150    24   151 0.86 EamA-like transporter family
EamA                 PF00892.15   126 sp|P42243|YCBK_BACSU -            312   5.3e-27   94.3  22.2   3   3   3.7e-24   2.7e-20   72.6  10.4     2   123   174   300   173   303 0.92 EamA-like transporter family
EmrE                 PF13536.1    113 sp|P42243|YCBK_BACSU -            312      0.54   10.4  28.1   2   4   3.9e-05      0.29   11.3   3.8     4   104    50   149    45   156 0.79 Multidrug resistance efflux transporter
EmrE                 PF13536.1    113 sp|P42243|YCBK_BACSU -            312      0.54   10.4  28.1   4   4   4.1e-05      0.31   11.2   4.2    37   108   233   305   219   309 0.80 Multidrug resistance efflux transporter
ABC_tran             PF00005.22   137 sp|P42246|YCBN_BACSU -            307   2.5e-33  115.2   0.1   1   1     5e-36   5.7e-33  114.1   0.0     2   137    21   161    20   161 0.95 ABC transporter
AAA_21               PF13304.1    303 sp|P42246|YCBN_BACSU -            307   1.4e-14   54.7   5.5   1   2   2.3e-16   2.6e-13   50.5   1.6     3   297    34   191    32   196 0.85 AAA domain
IstB_IS21            PF01695.12   178 sp|P42246|YCBN_BACSU -            307    0.0019   17.6   0.2   2   2   7.9e-05     0.091   12.1   0.0   103   143   145   187   136   201 0.83 IstB-like ATP binding protein
AAA_29               PF13555.1     62 sp|P42246|YCBN_BACSU -            307    0.0036   16.8   0.1   1   1   9.9e-06     0.011   15.2   0.1    17    51    25    58    14    63 0.81 P-loop containing region of AAA domain
DUF258               PF03193.11   161 sp|P42246|YCBN_BACSU -            307    0.0074   15.4   0.5   1   1   1.6e-05     0.018   14.2   0.5    20    77    14    72     4    83 0.83 Protein of unknown function, DUF258
AAA_30               PF13604.1    196 sp|P42246|YCBN_BACSU -            307     0.012   15.2   0.0   1   1   2.3e-05     0.027   14.0   0.0    20    53    32    65    20    82 0.79 AAA domain
SRP54                PF00448.17   196 sp|P42246|YCBN_BACSU -            307     0.012   15.0   0.0   1   1   4.2e-05     0.048   13.1   0.0     6    82    35   111    31   128 0.70 SRP54-type protein, GTPase domain
AAA_23               PF13476.1    202 sp|P42246|YCBN_BACSU -            307     0.018   15.3   6.8   1   1    0.0001      0.12   12.6   6.8    21    43    32    54    13   303 0.68 AAA domain
ATP_bind_1           PF03029.12   238 sp|P42246|YCBN_BACSU -            307     0.066   12.7   0.1   1   1   0.00019      0.21   11.0   0.1     2    62    36    94    35   120 0.86 Conserved hypothetical ATP binding protein
cobW                 PF02492.14   178 sp|P42246|YCBN_BACSU -            307     0.084   12.3   0.5   1   2   0.00036      0.41   10.0   0.1     3    41    33    72    31    76 0.82 CobW/HypB/UreG, nucleotide-binding domain
AAA_22               PF13401.1    131 sp|P42246|YCBN_BACSU -            307     0.095   12.8   0.3   1   1   0.00046      0.52   10.4   0.3     9    28    35    54    27   195 0.71 AAA domain
AAA_17               PF13207.1    121 sp|P42246|YCBN_BACSU -            307      0.17   12.7   0.4   1   1   0.00035       0.4   11.5   0.4     3    21    34    52    32   266 0.84 AAA domain
Aminotran_5          PF00266.14   371 sp|P42253|YCBU_BACSU -            370   9.7e-45  152.8   0.0   1   1   3.5e-48   1.3e-44  152.4   0.0     3   315    21   318    19   358 0.85 Aminotransferase class-V
Aminotran_1_2        PF00155.16   363 sp|P42253|YCBU_BACSU -            370    0.0005   19.1   0.1   1   1   2.8e-07     0.001   18.1   0.1    49   252    61   237    53   363 0.71 Aminotransferase class I and II
Cys_Met_Meta_PP      PF01053.15   386 sp|P42253|YCBU_BACSU -            370     0.017   13.4   0.0   1   1   6.2e-06     0.023   12.9   0.0    72   206    75   211    58   234 0.73 Cys/Met metabolism PLP-dependent enzyme
DegT_DnrJ_EryC1      PF01041.12   363 sp|P42253|YCBU_BACSU -            370     0.033   13.2   0.0   1   1   1.6e-05      0.06   12.3   0.0    21   152    52   187    33   191 0.76 DegT/DnrJ/EryC1/StrS aminotransferase family
Aldo_ket_red         PF00248.16   283 sp|P46905|YCCK_BACSU -            310     1e-77  260.7   0.0   1   1   1.5e-81   1.1e-77  260.6   0.0     1   282    16   309    16   310 0.97 Aldo/keto reductase family
TerD                 PF02342.13   186 sp|O34384|YCEE_BACSU -            192   6.6e-67  224.4   0.1   1   1   4.9e-71   7.3e-67  224.3   0.1     1   186     1   192     1   192 0.99 TerD domain
TerC                 PF03741.11   184 sp|O34447|YCEF_BACSU -            257   7.3e-55  185.2  13.2   1   2     2e-58   7.3e-55  185.2  13.2     2   181    35   211    34   214 0.94 Integral membrane protein TerC family
DUF475               PF04332.10   294 sp|O34447|YCEF_BACSU -            257   3.6e-07   30.0  12.9   2   2   7.4e-09   2.8e-05   23.8   8.7   182   287   136   239   101   246 0.79 Protein of unknown function (DUF475)
DUF3154              PF11351.3    123 sp|O34447|YCEF_BACSU -            257     0.065   12.9   2.4   1   1   6.2e-05      0.23   11.2   2.4    76   119   143   184   127   186 0.65 Protein of unknown function (DUF3154)
MscL                 PF01741.13   128 sp|O34447|YCEF_BACSU -            257      0.84    9.7  12.6   2   2   1.1e-05     0.042   13.9   5.2    21   104   167   251   156   257 0.75 Large-conductance mechanosensitive channel, MscL
TelA                 PF05816.6    333 sp|O34833|YCEH_BACSU -            363  2.3e-110  368.4  19.6   1   1  9.3e-114  2.7e-110  368.1  19.6     1   330    34   361    34   363 0.98 Toxic anion resistance protein (TelA)
MscS_TM              PF12794.2    340 sp|O34833|YCEH_BACSU -            363      0.11   11.1   0.1   2   2   0.00018      0.53    8.8   0.1   236   305   251   322   243   329 0.72 Mechanosensitive ion channel inner membrane domain 1
DASH_Dad3            PF08656.5     78 sp|O34833|YCEH_BACSU -            363      0.22   11.2   0.1   1   2   7.3e-05      0.22   11.2   0.1     6    44   118   156   115   164 0.91 DASH complex subunit Dad3
THP2                 PF09432.5    132 sp|O34833|YCEH_BACSU -            363      0.25   11.2   5.8   2   2    0.0002      0.59    9.9   2.2    39   108   116   184    93   211 0.79 Tho complex subunit THP2
Atg14                PF10186.4    302 sp|O34833|YCEH_BACSU -            363       9.1    5.1  14.6   1   2   6.1e-05      0.18   10.7   0.8    72   159   131   219   122   243 0.89 UV radiation resistance protein and autophagy-related subunit 14
MFS_1                PF07690.11   352 sp|O34724|YCEJ_BACSU -            390   5.9e-47  160.0  62.8   1   2     3e-35   7.4e-32  110.4  31.4     2   226     8   221     7   223 0.85 Major Facilitator Superfamily
MFS_1                PF07690.11   352 sp|O34724|YCEJ_BACSU -            390   5.9e-47  160.0  62.8   2   2     1e-18   2.5e-15   56.0  28.5     1   184   206   385   206   389 0.88 Major Facilitator Superfamily
MFS_3                PF05977.8    524 sp|O34724|YCEJ_BACSU -            390   1.3e-09   36.7  23.3   1   1   6.8e-13   1.7e-09   36.3  23.3    52   392    44   374    32   389 0.83 Transmembrane secretion effector
Sugar_tr             PF00083.19   451 sp|O34724|YCEJ_BACSU -            390   1.2e-08   33.9  44.2   1   2   1.4e-10   3.4e-07   29.2  15.5    44   189    35   173     8   177 0.80 Sugar (and other) transporter
MFS_2                PF13347.1    428 sp|O34724|YCEJ_BACSU -            390   3.7e-06   25.6  40.6   1   3   4.8e-07    0.0012   17.3  12.2   230   378     7   150     1   155 0.85 MFS/sugar transport protein
MFS_2                PF13347.1    428 sp|O34724|YCEJ_BACSU -            390   3.7e-06   25.6  40.6   2   3     4e-05     0.099   11.0  23.9   175   382   153   349   130   372 0.81 MFS/sugar transport protein
LacY_symp            PF01306.14   413 sp|O34724|YCEJ_BACSU -            390   1.7e-05   23.5  32.0   2   2   9.6e-08   0.00024   19.8  12.8    15   192   209   377   199   389 0.84 LacY proton/sugar symporter
DUF1228              PF06779.9     85 sp|O34724|YCEJ_BACSU -            390   1.7e-05   24.7   1.6   1   4   6.9e-09   1.7e-05   24.7   1.6     4    84    14    94    11    95 0.93 Protein of unknown function (DUF1228)
LysE                 PF01810.13   191 sp|P94381|YCGF_BACSU -            209   2.9e-50  170.1   9.5   1   1   6.8e-54   3.3e-50  170.0   9.5     1   191    12   203    12   203 0.98 LysE type translocator
DUF2910              PF11139.3    214 sp|P94381|YCGF_BACSU -            209   0.00024   20.3   1.4   1   1   7.4e-08   0.00036   19.7   1.4    31   213    37   204    28   205 0.85 Protein of unknown function (DUF2910)
Herpes_UL49_5        PF05702.6     98 sp|P94381|YCGF_BACSU -            209     0.029   14.2   0.7   2   2   2.5e-05      0.12   12.2   0.1    51    88   111   148    70   156 0.88 Herpesvirus UL49.5 envelope/tegument protein
YqcI_YcgG            PF08892.6    219 sp|P94382|YCGG_BACSU -            253     4e-89  297.9   0.1   1   1   3.2e-93   4.7e-89  297.6   0.1     3   217    25   243    23   245 0.98 YqcI/YcgG family
AA_permease          PF00324.16   478 sp|P94383|YCGH_BACSU -            446   2.1e-45  154.9  38.6   1   1   1.2e-48   3.6e-45  154.2  38.7     3   386    19   378    17   434 0.94 Amino acid permease
AA_permease_2        PF13520.1    426 sp|P94383|YCGH_BACSU -            446   4.3e-22   78.2  46.3   1   1   2.9e-25   8.7e-22   77.2  46.3     1   386    13   395    13   443 0.77 Amino acid permease
Spore_permease       PF03845.8    320 sp|P94383|YCGH_BACSU -            446   1.9e-10   39.9  28.7   1   2   1.9e-13   5.6e-10   38.3  23.4     6   277    17   297    12   312 0.83 Spore germination protein
MHC2-interact        PF09307.5    114 sp|P94383|YCGH_BACSU -            446     0.021   14.5   1.2   1   2   1.7e-05     0.051   13.3   0.0    31    64    38    69    34    78 0.84 CLIP, MHC2 interacting
Methyltransf_31      PF13847.1    152 sp|O31474|YCGJ_BACSU -            253   9.1e-27   93.5   0.0   1   1   1.9e-29   1.2e-26   93.1   0.0     5   126    39   161    36   214 0.80 Methyltransferase domain
Methyltransf_11      PF08241.7     95 sp|O31474|YCGJ_BACSU -            253   9.1e-26   90.1   0.0   1   1   2.5e-28   1.5e-25   89.4   0.0     1    94    42   137    42   138 0.98 Methyltransferase domain
Ubie_methyltran      PF01209.13   233 sp|O31474|YCGJ_BACSU -            253   1.8e-20   73.0   0.0   1   1   4.1e-23   2.5e-20   72.5   0.0    42   163    32   150    26   157 0.92 ubiE/COQ5 methyltransferase family
Methyltransf_23      PF13489.1    161 sp|O31474|YCGJ_BACSU -            253   1.4e-19   70.4   0.1   1   1   2.8e-22   1.7e-19   70.0   0.1    19   157    34   183    15   187 0.83 Methyltransferase domain
Methyltransf_25      PF13649.1    101 sp|O31474|YCGJ_BACSU -            253   1.3e-18   67.2   0.1   1   1   3.8e-21   2.4e-18   66.3   0.1     1   101    41   134    41   134 0.97 Methyltransferase domain
Methyltransf_18      PF12847.2    112 sp|O31474|YCGJ_BACSU -            253   2.6e-15   56.9   0.0   1   1   8.6e-18   5.3e-15   55.9   0.0     2   111    38   140    37   141 0.90 Methyltransferase domain
Methyltransf_12      PF08242.7     99 sp|O31474|YCGJ_BACSU -            253   2.3e-13   50.4   0.0   1   1     6e-16   3.7e-13   49.7   0.0     1    99    42   136    42   136 0.91 Methyltransferase domain
Methyltransf_26      PF13659.1    117 sp|O31474|YCGJ_BACSU -            253   8.5e-13   48.3   0.1   1   1   2.3e-15   1.4e-12   47.6   0.1     2   114    39   139    38   141 0.92 Methyltransferase domain
MTS                  PF05175.9    170 sp|O31474|YCGJ_BACSU -            253     5e-08   32.5   0.0   1   1   1.1e-10     7e-08   32.0   0.0    17   155    25   154    10   164 0.82 Methyltransferase small domain
Methyltransf_29      PF03141.11   506 sp|O31474|YCGJ_BACSU -            253   1.1e-06   27.3   0.0   1   1   1.8e-09   1.1e-06   27.3   0.0   104   222    25   143     2   232 0.72 Putative S-adenosyl-L-methionine-dependent methyltransferase
PCMT                 PF01135.14   210 sp|O31474|YCGJ_BACSU -            253   2.9e-06   26.9   0.0   1   1   6.3e-09   3.9e-06   26.5   0.0    64   132    28    93     3   138 0.85 Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT)
Methyltransf_32      PF13679.1    141 sp|O31474|YCGJ_BACSU -            253     9e-05   22.1   0.0   1   1   4.2e-07   0.00026   20.6   0.0    21    97    33   107    24   241 0.74 Methyltransferase domain
Methyltransf_4       PF02390.12   197 sp|O31474|YCGJ_BACSU -            253   0.00022   20.3   0.0   1   1   9.7e-07    0.0006   18.9   0.0    11    81    29    97    17   141 0.84 Putative methyltransferase
PrmA                 PF06325.8    295 sp|O31474|YCGJ_BACSU -            253   0.00026   20.1   0.0   1   1   6.1e-07   0.00038   19.6   0.0   159   256    35   137    25   139 0.82 Ribosomal protein L11 methyltransferase (PrmA)
GidB                 PF02527.10   184 sp|O31474|YCGJ_BACSU -            253   0.00044   19.4   0.0   1   1   1.1e-06   0.00071   18.7   0.0    46   147    37   139    26   160 0.81 rRNA small subunit methyltransferase G
DREV                 PF05219.7    265 sp|O31474|YCGJ_BACSU -            253   0.00088   18.2   0.0   1   1     2e-06    0.0012   17.7   0.0    91   185    34   137    24   168 0.70 DREV methyltransferase
Methyltransf_3       PF01596.12   205 sp|O31474|YCGJ_BACSU -            253   0.00099   18.2   0.0   1   1   3.5e-06    0.0022   17.0   0.0    31   107    20    95     4   103 0.84 O-methyltransferase
UPF0020              PF01170.13   180 sp|O31474|YCGJ_BACSU -            253    0.0072   15.9   0.0   1   1   1.9e-05     0.012   15.2   0.0    62   112    60   109    27   111 0.82 Putative RNA methylase family UPF0020
NodS                 PF05401.6    201 sp|O31474|YCGJ_BACSU -            253    0.0082   15.5   0.0   1   1   2.1e-05     0.013   14.9   0.0    44   143    38   137    14   143 0.82 Nodulation protein S (NodS)
RrnaAD               PF00398.15   262 sp|O31474|YCGJ_BACSU -            253     0.019   13.9   0.0   1   1     6e-05     0.037   13.0   0.0    24    78    31    84    28    93 0.87 Ribosomal RNA adenine dimethylase
CMAS                 PF02353.15   273 sp|O31474|YCGJ_BACSU -            253     0.027   13.5   0.0   1   1   7.1e-05     0.044   12.8   0.0    53   164    28   138    12   154 0.80 Mycolic acid cyclopropane synthetase
Methyltransf_24      PF13578.1    106 sp|O31474|YCGJ_BACSU -            253     0.044   14.6   0.1   1   1   0.00015     0.093   13.5   0.1     3   103    44   138    42   142 0.72 Methyltransferase domain
SSF                  PF00474.12   406 sp|P94392|YCGO_BACSU -            473    8e-110  367.2  30.0   1   2  5.4e-114    8e-110  367.2  30.0     1   406    18   416    18   416 0.98 Sodium:solute symporter family
HTH_30               PF13556.1     59 sp|P94393|YCGP_BACSU -            411   2.6e-20   71.7   0.5   1   1     1e-23   5.1e-20   70.8   0.5     1    58   349   406   349   407 0.97 PucR C-terminal helix-turn-helix domain
DUF2356              PF10189.4    230 sp|P94393|YCGP_BACSU -            411    0.0086   15.1   0.1   1   1   3.5e-06     0.018   14.1   0.1   132   192   215   276   203   296 0.85 Conserved protein (DUF2356)
Borrelia_orfD        PF02999.9     97 sp|P94393|YCGP_BACSU -            411      0.01   15.9   0.2   2   2   4.8e-05      0.24   11.5   0.1    44    89   324   371   312   378 0.86 Borrelia orf-D family
DUF1980              PF09323.5    182 sp|P94394|YCGQ_BACSU -            285   3.4e-64  215.9   3.4   1   1   3.5e-68   5.2e-64  215.3   3.4     1   182     1   190     1   190 0.98 Domain of unknown function (DUF1980)
DUF318               PF03773.8    307 sp|P94395|YCGR_BACSU -            294   4.2e-95  318.2  24.1   1   1   3.4e-99     5e-95  318.0  24.1     2   306     7   293     6   294 0.98 Predicted permease
Abhydrolase_6        PF12697.2    228 sp|P94396|YCGS_BACSU -            284   9.7e-22   77.9   0.0   1   1   5.7e-25   1.2e-21   77.6   0.0     8   219    31   267    26   274 0.76 Alpha/beta hydrolase family
Abhydrolase_1        PF00561.15   230 sp|P94396|YCGS_BACSU -            284   1.2e-14   54.4   0.0   1   1   9.1e-18   1.9e-14   53.7   0.0     3   216    52   265    50   274 0.89 alpha/beta hydrolase fold
Abhydrolase_5        PF12695.2    145 sp|P94396|YCGS_BACSU -            284   7.2e-09   35.5   0.0   1   1   1.5e-11   3.1e-08   33.4   0.0     2   136    26   255    25   264 0.65 Alpha/beta hydrolase family
Hydrolase_4          PF12146.3     79 sp|P94396|YCGS_BACSU -            284    0.0052   16.5   0.0   1   1   5.9e-06     0.012   15.3   0.0    19    63    26    69    17    94 0.86 Putative lysophospholipase
Ndr                  PF03096.9    283 sp|P94396|YCGS_BACSU -            284     0.052   12.0   0.0   1   1   2.7e-05     0.058   11.8   0.0    51   137    45   126     8   229 0.75 Ndr family
Abhydrolase_4        PF08386.5    103 sp|P94396|YCGS_BACSU -            284     0.079   12.8   0.0   1   1   6.9e-05      0.15   11.9   0.0    35    78   225   268   207   278 0.85 TAP-like protein
ArsC                 PF03960.10   110 sp|P94396|YCGS_BACSU -            284      0.16   12.0   0.0   1   1   0.00016      0.33   11.0   0.0    12    81   123   193   117   198 0.85 ArsC family
YchF-GTPase_C        PF06071.8     84 sp|P37518|YCHF_BACSU -            366   2.7e-41  139.2   0.2   1   1   2.2e-44   4.8e-41  138.4   0.2     1    84   282   365   282   365 0.99 Protein of unknown function (DUF933)
MMR_HSR1             PF01926.18   116 sp|P37518|YCHF_BACSU -            366   1.1e-21   76.9   0.2   1   3     3e-24   6.4e-21   74.4   0.0     2    93     5   112     4   160 0.77 50S ribosome-binding GTPase
FeoB_N               PF02421.13   156 sp|P37518|YCHF_BACSU -            366   1.1e-08   34.4   0.0   1   1   1.8e-11   3.7e-08   32.7   0.0     4    48     6    50     3   108 0.89 Ferrous iron transport protein B
AAA_17               PF13207.1    121 sp|P37518|YCHF_BACSU -            366      0.04   14.7   0.0   1   1     6e-05      0.13   13.1   0.0     3    46     6    50     5   189 0.85 AAA domain
Miro                 PF08477.8    119 sp|P37518|YCHF_BACSU -            366     0.044   14.2   0.0   1   2   0.00014      0.29   11.6   0.0     4   104     7   127     5   137 0.78 Miro-like protein
CDC37_N              PF03234.9    177 sp|P37518|YCHF_BACSU -            366     0.059   13.6   3.5   1   1   5.1e-05      0.11   12.8   3.5    48   166   130   259   123   270 0.69 Cdc37 N terminal kinase binding
AAA_23               PF13476.1    202 sp|P37518|YCHF_BACSU -            366      0.16   12.3   4.5   1   1   0.00045      0.95    9.7   4.6    24   156     7   242     5   280 0.55 AAA domain
YkuD                 PF03734.9    144 sp|C0SP99|YCIB_BACSU -            194   4.7e-21   75.5   0.2   1   1   8.6e-25   6.4e-21   75.1   0.2     2   144    68   193    67   193 0.81 L,D-transpeptidase catalytic domain
cobW                 PF02492.14   178 sp|P94400|YCIC_BACSU -            397   8.5e-59  197.9   0.4   1   1   1.2e-61   1.2e-58  197.5   0.4     1   177     5   210     5   211 0.94 CobW/HypB/UreG, nucleotide-binding domain
CobW_C               PF07683.9     94 sp|P94400|YCIC_BACSU -            397   3.3e-28   97.2   0.0   1   1     1e-30   9.3e-28   95.8   0.0     1    94   259   374   259   374 0.99 Cobalamin synthesis protein cobW C-terminal domain
GTP_EFTU             PF00009.22   188 sp|P94400|YCIC_BACSU -            397    0.0016   17.9   0.0   2   2   0.00083      0.77    9.1   0.0    93   151   128   223   123   338 0.68 Elongation factor Tu GTP binding domain
MMR_HSR1             PF01926.18   116 sp|P94400|YCIC_BACSU -            397    0.0024   17.8   0.2   1   1   8.2e-06    0.0076   16.1   0.2     3    92     8   143     6   218 0.70 50S ribosome-binding GTPase
Arch_ATPase          PF01637.13   234 sp|P94400|YCIC_BACSU -            397    0.0047   16.6   0.3   1   1     1e-05    0.0095   15.6   0.0    21    64     5    47     2   100 0.80 Archaeal ATPase
UPF0079              PF02367.12   123 sp|P94400|YCIC_BACSU -            397    0.0069   16.0   0.1   1   1   1.4e-05     0.013   15.1   0.1    16    39     5    28     1    38 0.82 Uncharacterised P-loop hydrolase UPF0079
T2SE                 PF00437.15   272 sp|P94400|YCIC_BACSU -            397     0.026   13.4   0.1   1   1   4.8e-05     0.045   12.6   0.1   132   172     8    47     3    58 0.89 Type II/IV secretion system protein
DUF258               PF03193.11   161 sp|P94400|YCIC_BACSU -            397     0.037   13.2   0.1   1   1     7e-05     0.064   12.4   0.1    37    60     6    34     1    74 0.72 Protein of unknown function, DUF258
AAA_16               PF13191.1    185 sp|P94400|YCIC_BACSU -            397     0.048   13.6   0.2   1   1   0.00019      0.17   11.8   0.0    25    59     5    39     2    56 0.82 AAA ATPase domain
CbiA                 PF01656.18   195 sp|P94400|YCIC_BACSU -            397     0.093   12.1   0.1   1   1   0.00019      0.18   11.1   0.1     3   103     8   100     6   141 0.73 CobQ/CobB/MinD/ParA nucleotide binding domain
ABC_tran             PF00005.22   137 sp|P94400|YCIC_BACSU -            397       0.1   12.8   0.0   1   1   0.00022       0.2   11.9   0.0    13    37     6    30     1   105 0.83 ABC transporter
Zeta_toxin           PF06414.7    201 sp|P94400|YCIC_BACSU -            397      0.12   11.4   0.0   1   1   0.00024      0.23   10.5   0.0    19    51     7    39     3    41 0.86 Zeta toxin
AAA_29               PF13555.1     62 sp|P94400|YCIC_BACSU -            397      0.16   11.5   0.1   1   1   0.00036      0.33   10.5   0.1    25    43     6    24     1    26 0.86 P-loop containing region of AAA domain
BPD_transp_1         PF00528.17   185 sp|P42399|YCKA_BACSU -            226   7.6e-25   87.5  14.0   3   3   5.1e-29   7.6e-25   87.5  14.0     1   183    41   222    41   224 0.93 Binding-protein-dependent transport system inner membrane component
SBP_bac_3            PF00497.15   225 sp|P42400|YCKB_BACSU -            287   1.3e-51  175.0   4.9   1   1   3.1e-55   1.5e-51  174.7   4.9     1   224    47   270    47   271 0.94 Bacterial extracellular solute-binding proteins, family 3
Phosphonate-bd       PF12974.2    243 sp|P42400|YCKB_BACSU -            287   7.3e-06   25.5   5.5   2   2   2.7e-07    0.0013   18.1   4.0    25   232    83   271    82   283 0.72 ABC transporter, phosphonate, periplasmic substrate-binding protein
NMT1                 PF09084.6    216 sp|P42400|YCKB_BACSU -            287   1.3e-05   24.8   1.4   1   1     4e-09     2e-05   24.3   1.4    20   157    86   213    83   256 0.75 NMT1/THI5 like
Abhydrolase_6        PF12697.2    228 sp|P94407|YCLE_BACSU -            281   4.6e-22   79.0   0.1   1   1   1.3e-25   6.3e-22   78.5   0.1    16   225    36   271    27   273 0.76 Alpha/beta hydrolase family
Abhydrolase_1        PF00561.15   230 sp|P94407|YCLE_BACSU -            281   4.2e-15   55.9   0.0   1   1   1.4e-18   6.7e-15   55.2   0.0     4   226    49   273    46   277 0.84 alpha/beta hydrolase fold
Abhydrolase_5        PF12695.2    145 sp|P94407|YCLE_BACSU -            281   1.3e-08   34.7   0.0   1   1   3.2e-11   1.6e-07   31.1   0.0    24   144    43   261    28   262 0.87 Alpha/beta hydrolase family
PTR2                 PF00854.16   373 sp|P94408|YCLF_BACSU -            492   4.2e-77  259.4  20.5   1   1   7.1e-81   5.2e-77  259.1  20.5     2   372    96   443    95   444 0.98 POT family
MFS_1                PF07690.11   352 sp|P94408|YCLF_BACSU -            492   1.6e-19   69.8  53.4   1   2   2.4e-19   1.8e-15   56.5  27.0     7   291    38   303    36   316 0.67 Major Facilitator Superfamily
MFS_1                PF07690.11   352 sp|P94408|YCLF_BACSU -            492   1.6e-19   69.8  53.4   2   2   1.2e-07   0.00087   18.0  19.9    27   176   324   482   307   490 0.76 Major Facilitator Superfamily
ABC_tran             PF00005.22   137 sp|P94411|YCLH_BACSU -            226   1.8e-28   99.5   0.2   1   1     4e-31   3.3e-28   98.7   0.1     2   136    22   167    21   168 0.87 ABC transporter
AAA_21               PF13304.1    303 sp|P94411|YCLH_BACSU -            226   5.5e-06   26.5   0.1   1   1   6.7e-06    0.0055   16.6   0.1   165   299    96   200    33   204 0.58 AAA domain
SbcCD_C              PF13558.1     90 sp|P94411|YCLH_BACSU -            226   9.1e-05   22.2   0.3   1   1   2.6e-06    0.0022   17.8   0.3    10    89   116   183   110   184 0.78 Putative exonuclease SbcCD, C subunit
SMC_N                PF02463.14   220 sp|P94411|YCLH_BACSU -            226   0.00011   21.5   1.9   2   2     5e-06    0.0042   16.3   0.4   105   212    99   213    68   220 0.81 RecF/RecN/SMC N terminal domain
AAA_25               PF13481.1    194 sp|P94411|YCLH_BACSU -            226   0.00059   19.3   0.2   1   2   6.8e-05     0.056   12.8   0.0    31    52    29    49    16    66 0.84 AAA domain
AAA_15               PF13175.1    415 sp|P94411|YCLH_BACSU -            226    0.0038   16.3   0.7   2   2   0.00069      0.57    9.1   0.0   372   414   160   202   146   203 0.91 AAA ATPase domain
DUF258               PF03193.11   161 sp|P94411|YCLH_BACSU -            226    0.0062   15.7   1.2   1   1     5e-05     0.042   13.0   1.1    20   124    15   192     3   201 0.62 Protein of unknown function, DUF258
AAA_22               PF13401.1    131 sp|P94411|YCLH_BACSU -            226     0.011   15.9   4.7   1   1   0.00023      0.19   11.8   4.7     3   116    30   190    28   205 0.71 AAA domain
AAA_23               PF13476.1    202 sp|P94411|YCLH_BACSU -            226     0.015   15.5   5.2   1   1   5.5e-05     0.045   14.0   5.2    10   132    21   149    19   209 0.63 AAA domain
AAA_29               PF13555.1     62 sp|P94411|YCLH_BACSU -            226     0.016   14.6   0.2   1   1   4.3e-05     0.035   13.6   0.2    12    40    21    48    19    50 0.84 P-loop containing region of AAA domain
PhoH                 PF02562.11   205 sp|P94411|YCLH_BACSU -            226     0.023   13.9   0.1   1   1   4.4e-05     0.036   13.2   0.1    16    48    28    61    13   115 0.83 PhoH-like protein
AAA_30               PF13604.1    196 sp|P94411|YCLH_BACSU -            226     0.039   13.5   1.7   1   2   0.00064      0.53    9.8   0.1    16    38    29    51    24    69 0.85 AAA domain
KaiC                 PF06745.8    227 sp|P94411|YCLH_BACSU -            226     0.078   12.0   1.3   1   2   0.00023      0.19   10.8   0.1    16    35    28    47    20    50 0.89 KaiC
AAA_16               PF13191.1    185 sp|P94411|YCLH_BACSU -            226      0.14   12.1   0.0   1   1   0.00025      0.21   11.5   0.0    23   117    30   133    20   213 0.56 AAA ATPase domain
Miro                 PF08477.8    119 sp|P94411|YCLH_BACSU -            226      0.14   12.6   1.1   1   1    0.0007      0.58   10.6   0.9     4    28    36    59    34   198 0.87 Miro-like protein
AAA_17               PF13207.1    121 sp|P94411|YCLH_BACSU -            226      0.29   11.9   2.5   1   1   0.00046      0.38   11.5   2.5     3    18    35    50    33   201 0.94 AAA domain
FtsX                 PF02687.16   121 sp|P94412|YCLI_BACSU -            486     1e-25   89.8  11.3   2   2   1.8e-29   1.4e-25   89.4   8.0     4   121   325   478   323   478 0.97 FtsX-like permease family
MacB_PCD             PF12704.2    232 sp|P94412|YCLI_BACSU -            486   2.1e-23   83.1  17.0   1   2   1.9e-26   1.4e-22   80.4   8.3     1   231     7   290     7   291 0.79 MacB-like periplasmic core domain
FecCD                PF01032.13   311 sp|P94418|YCLN_BACSU -            316   2.9e-63  213.5  29.5   1   1   2.5e-67   3.7e-63  213.2  29.5     1   311     9   311     9   311 0.98 FecCD transport family
FecCD                PF01032.13   311 sp|P94419|YCLO_BACSU -            315   8.2e-55  185.8  33.0   1   1   3.4e-58   1.3e-54  185.1  32.9    36   311    30   310     8   310 0.92 FecCD transport family
ABC-3                PF00950.12   258 sp|P94419|YCLO_BACSU -            315   6.8e-05   22.2  24.9   3   3   1.8e-08   6.8e-05   22.2  24.9    54   256   100   308    96   310 0.79 ABC 3 transport family
PepSY_TM             PF03929.11    27 sp|P94419|YCLO_BACSU -            315     0.087   13.2   0.7   2   2   2.4e-05     0.087   13.2   0.7    10    27   175   192   167   192 0.92 PepSY-associated TM helix
7TMR-DISM_7TM        PF07695.6    205 sp|P94419|YCLO_BACSU -            315      0.47   10.1  41.9   1   3   0.00017      0.64    9.6  18.4    32   181     9   158     1   162 0.62 7TM diverse intracellular signalling
ABC_tran             PF00005.22   137 sp|P94420|YCLP_BACSU -            252   1.3e-30  106.5   0.1   1   1   2.3e-33   1.8e-30  106.0   0.1     1   137    17   164    17   164 0.97 ABC transporter
AAA_21               PF13304.1    303 sp|P94420|YCLP_BACSU -            252   2.5e-13   50.6   1.8   1   2   3.4e-08   2.7e-05   24.3   0.2     1    26    29    52    29    68 0.76 AAA domain
AAA_21               PF13304.1    303 sp|P94420|YCLP_BACSU -            252   2.5e-13   50.6   1.8   2   2   1.2e-08   9.2e-06   25.8   0.1   219   292    97   189    66   198 0.70 AAA domain
SMC_N                PF02463.14   220 sp|P94420|YCLP_BACSU -            252   1.4e-08   34.2   1.0   1   2   0.00016      0.13   11.4   0.3    19    41    22    44     8    48 0.77 RecF/RecN/SMC N terminal domain
SMC_N                PF02463.14   220 sp|P94420|YCLP_BACSU -            252   1.4e-08   34.2   1.0   2   2   6.8e-08   5.3e-05   22.5   0.0    98   203    45   199    44   215 0.90 RecF/RecN/SMC N terminal domain
AAA_29               PF13555.1     62 sp|P94420|YCLP_BACSU -            252   4.4e-05   22.9   0.2   1   1     1e-07   7.9e-05   22.1   0.2    16    43    21    47    16    58 0.80 P-loop containing region of AAA domain
AAA_14               PF13173.1    128 sp|P94420|YCLP_BACSU -            252    0.0004   20.2   1.8   1   2   0.00051       0.4   10.5   0.1     2    40    27    65    26    94 0.69 AAA domain
AAA_13               PF13166.1    712 sp|P94420|YCLP_BACSU -            252   0.00067   18.2   3.1   1   2   5.1e-06     0.004   15.6   0.1    15    53    26    64    15    91 0.79 AAA domain
AAA_16               PF13191.1    185 sp|P94420|YCLP_BACSU -            252    0.0007   19.6   0.1   1   1   5.5e-06    0.0043   17.0   0.1    19   162    22   199    15   209 0.61 AAA ATPase domain
DUF258               PF03193.11   161 sp|P94420|YCLP_BACSU -            252    0.0017   17.5   0.2   1   1   3.6e-06    0.0028   16.8   0.2    26    66    17    58     2    67 0.79 Protein of unknown function, DUF258
DUF659               PF04937.10   153 sp|P94420|YCLP_BACSU -            252    0.0024   17.3   0.1   1   1   5.3e-06    0.0042   16.5   0.1    44   137   140   233   132   246 0.74 Protein of unknown function (DUF 659)
AAA_23               PF13476.1    202 sp|P94420|YCLP_BACSU -            252    0.0033   17.7   4.0   1   1   9.4e-06    0.0074   16.6   4.0    11    40    18    48     9   189 0.72 AAA domain
Arch_ATPase          PF01637.13   234 sp|P94420|YCLP_BACSU -            252     0.004   16.8   1.2   1   1   9.3e-05     0.072   12.7   1.2    20   130    27   199    17   217 0.69 Archaeal ATPase
AAA_22               PF13401.1    131 sp|P94420|YCLP_BACSU -            252      0.01   15.9   2.1   1   1   0.00019      0.15   12.2   2.1     3   123    26   193    24   201 0.58 AAA domain
AAA_25               PF13481.1    194 sp|P94420|YCLP_BACSU -            252     0.012   15.0   0.1   1   2   0.00046      0.36   10.2   0.0    30    51    24    45    19    63 0.88 AAA domain
AAA_15               PF13175.1    415 sp|P94420|YCLP_BACSU -            252     0.013   14.6   5.7   1   2   0.00011     0.085   11.8   1.4    19    49    23    57     7    98 0.61 AAA ATPase domain
SbcCD_C              PF13558.1     90 sp|P94420|YCLP_BACSU -            252     0.029   14.2   0.1   1   1   0.00024      0.19   11.6   0.1    63    89   153   179   121   180 0.84 Putative exonuclease SbcCD, C subunit
Response_reg         PF00072.19   112 sp|P94420|YCLP_BACSU -            252     0.039   13.9   0.1   1   1   8.6e-05     0.067   13.1   0.1    33   110   143   226   133   228 0.90 Response regulator receiver domain
MobB                 PF03205.9    140 sp|P94420|YCLP_BACSU -            252     0.045   13.4   0.0   1   1   0.00012     0.092   12.4   0.0     2    28    29    55    28    88 0.90 Molybdopterin guanine dinucleotide synthesis protein B
AAA_30               PF13604.1    196 sp|P94420|YCLP_BACSU -            252     0.068   12.7   0.0   1   1   0.00016      0.12   11.9   0.0    14    50    23    59    19    84 0.79 AAA domain
Peripla_BP_2         PF01497.13   238 sp|P94421|YCLQ_BACSU -            317   1.2e-36  126.0   0.3   1   1     2e-40   1.5e-36  125.7   0.3     1   236    57   291    57   293 0.91 Periplasmic binding protein
Inhibitor_I53        PF11714.3     78 sp|P94421|YCLQ_BACSU -            317     0.017   15.1   0.0   1   1   4.2e-06     0.031   14.2   0.0     1    42     1    42     1    49 0.87 Thrombin inhibitor Madanin
MFS_1                PF07690.11   352 sp|P94422|YCNB_BACSU -            472   4.4e-54  183.5  57.2   1   2   6.1e-54   2.2e-50  171.3  55.7     2   351    20   410    19   411 0.86 Major Facilitator Superfamily
MFS_2                PF13347.1    428 sp|P94422|YCNB_BACSU -            472   1.7e-06   26.7  46.3   1   4   1.8e-07   0.00066   18.1  13.8   229   385    18   165    11   169 0.93 MFS/sugar transport protein
MFS_2                PF13347.1    428 sp|P94422|YCNB_BACSU -            472   1.7e-06   26.7  46.3   4   4     2e-08   7.5e-05   21.2  13.1    10   205   272   467   261   472 0.76 MFS/sugar transport protein
DUF4516              PF14990.1     47 sp|P94422|YCNB_BACSU -            472       1.3    8.5   5.7   1   1    0.0002      0.76    9.3   2.1     6    24   221   239   213   241 0.92 Domain of unknown function (DUF4516)
ABM                  PF03992.11    78 sp|P94425|YCNE_BACSU -             95   2.8e-19   68.9   1.0   1   1   6.6e-23   3.2e-19   68.7   1.0     1    77     1    76     1    77 0.97 Antibiotic biosynthesis monooxygenase
NIPSNAP              PF07978.8    102 sp|P94425|YCNE_BACSU -             95    0.0068   16.3   0.2   1   1   1.7e-06    0.0082   16.0   0.2     8    64    10    65     5    80 0.91 NIPSNAP
MFS_3                PF05977.8    524 sp|P94425|YCNE_BACSU -             95      0.11   10.5   0.2   1   1   2.4e-05      0.12   10.4   0.2   426   480     3    60     1    72 0.77 Transmembrane secretion effector
CopC                 PF04234.7     97 sp|C0SP95|YCNJ_BACSU -            541     1e-26   93.3   0.3   1   1   2.3e-29   3.9e-26   91.5   0.1     1    96    24   120    24   121 0.99 CopC domain
CopD                 PF05425.8    105 sp|C0SP95|YCNJ_BACSU -            541   4.7e-19   68.5   8.7   3   3   2.9e-22   4.7e-19   68.5   8.7     2   104   327   419   326   420 0.91 Copper resistance protein D
YtkA                 PF13115.1     86 sp|C0SP95|YCNJ_BACSU -            541   2.4e-06   27.8   0.8   2   2     6e-09   9.9e-06   25.8   0.1    16    86   452   524   439   524 0.87 YtkA-like
Y_Y_Y                PF07495.8     66 sp|C0SP95|YCNJ_BACSU -            541   0.00065   19.4   0.2   1   1   1.3e-06    0.0021   17.7   0.1    25    65   440   482   435   483 0.87 Y_Y_Y domain
Big_5                PF13205.1    107 sp|C0SP95|YCNJ_BACSU -            541     0.085   13.4   0.2   1   1   0.00014      0.23   12.0   0.0     6    82    26   102    23   116 0.74 Bacterial Ig-like domain
Big_1                PF02369.11   100 sp|C0SP95|YCNJ_BACSU -            541      0.13   12.1   0.3   1   1   0.00022      0.37   10.7   0.3    17    60   450   492   436   526 0.72 Bacterial Ig-like domain (group 1)
FabA                 PF07977.8    138 sp|P42961|YCSD_BACSU -            130   2.7e-15   56.0   0.0   1   1   2.4e-19   3.5e-15   55.6   0.0     1   138     6   123     6   123 0.92 FabA-like domain
Hydrolase_3          PF08282.7    254 sp|P42962|YCSE_BACSU -            249   6.4e-58  196.3   7.0   1   2   1.2e-27   2.2e-24   86.4   0.0     1   110    13   122    13   135 0.94 haloacid dehalogenase-like hydrolase
Hydrolase_3          PF08282.7    254 sp|P42962|YCSE_BACSU -            249   6.4e-58  196.3   7.0   2   2   2.5e-35   4.5e-32  111.6   4.2   134   254   125   244   121   244 0.91 haloacid dehalogenase-like hydrolase
S6PP                 PF05116.8    247 sp|P42962|YCSE_BACSU -            249   4.2e-20   72.0   0.6   1   1     3e-23   5.6e-20   71.6   0.6     3   246    11   248     9   249 0.80 Sucrose-6F-phosphate phosphohydrolase
Hydrolase            PF00702.21   215 sp|P42962|YCSE_BACSU -            249   1.8e-09   38.3   0.4   1   1     4e-12   7.4e-09   36.3   0.4     1   215    10   212    10   212 0.65 haloacid dehalogenase-like hydrolase
HAD                  PF12710.2    192 sp|P42962|YCSE_BACSU -            249   3.7e-05   23.9   1.0   2   2   6.5e-07    0.0012   19.0   0.0    96   192    34   209    25   209 0.77 haloacid dehalogenase-like hydrolase
Hydrolase_6          PF13344.1    101 sp|P42962|YCSE_BACSU -            249    0.0008   19.2   0.2   1   2   1.7e-06    0.0031   17.3   0.0     1    60    13    73    13    91 0.86 Haloacid dehalogenase-like hydrolase
HAD_2                PF13419.1    176 sp|P42962|YCSE_BACSU -            249     0.019   15.1   0.5   2   2   0.00016      0.29   11.3   0.0   137   174   179   216   169   217 0.90 Haloacid dehalogenase-like hydrolase
DUF2525              PF10733.4     58 sp|P42962|YCSE_BACSU -            249     0.037   13.8   1.0   1   2   0.00014      0.26   11.1   0.0    12    46    28    66     7    68 0.67 Protein of unknown function (DUF2525)
Acid_phosphat_B      PF03767.9    230 sp|P42962|YCSE_BACSU -            249      0.15   11.4   1.8   3   3   0.00044      0.81    9.0   0.0   180   211   176   210   141   215 0.76 HAD superfamily, subfamily IIIB (Acid phosphatase)
LamB_YcsF            PF03746.11   242 sp|P42963|YCSF_BACSU -            257  5.3e-111  369.5   0.5   1   1    4e-115    6e-111  369.3   0.5     1   241     3   243     3   244 0.99 LamB/YcsF family
Nramp                PF01566.13   358 sp|P42964|YCSG_BACSU -            404   9.4e-25   87.1  27.3   1   1     2e-28   1.5e-24   86.5  27.3    17   355    51   371    43   373 0.85 Natural resistance-associated macrophage protein
DUF1445              PF07286.7    143 sp|P42966|YCSI_BACSU -            257   3.1e-70  234.4   0.2   1   1   5.2e-74   3.9e-70  234.0   0.2     1   143   106   248   106   248 1.00 Protein of unknown function (DUF1445)
DUF1495              PF07381.6     90 sp|P42966|YCSI_BACSU -            257     0.078   12.6   0.0   1   1   1.9e-05      0.14   11.8   0.0    19    80    82   142    77   147 0.87 Winged helix DNA-binding domain (DUF1495)
Aldo_ket_red         PF00248.16   283 sp|P42972|YCSN_BACSU -            300   1.4e-57  194.6   0.0   1   1   1.1e-61   1.7e-57  194.4   0.0     2   278    15   290    14   294 0.96 Aldo/keto reductase family
MFS_1                PF07690.11   352 sp|Q08791|YCXA_BACSU -            408   8.1e-35  120.1  44.9   1   1   1.6e-38   8.1e-35  120.1  44.9     2   351    17   359    11   360 0.85 Major Facilitator Superfamily
Sugar_tr             PF00083.19   451 sp|Q08791|YCXA_BACSU -            408    0.0089   14.6  42.3   1   2   6.2e-06     0.031   12.8  15.6    26   166    26   163     7   192 0.72 Sugar (and other) transporter
YebO                 PF13974.1     80 sp|Q08791|YCXA_BACSU -            408       9.5    6.0   9.3   1   1   6.1e-05       0.3   10.8   2.4     2    24    53    75    52    77 0.92 YebO-like protein
EamA                 PF00892.15   126 sp|Q08794|YCXC_BACSU -            312   4.6e-41  139.8  33.9   1   2   1.4e-26   5.2e-23   81.4  14.6     1   125    18   141    18   142 0.96 EamA-like transporter family
EamA                 PF00892.15   126 sp|Q08794|YCXC_BACSU -            312   4.6e-41  139.8  33.9   2   2   2.4e-21   8.8e-18   64.5  11.3     2   124   165   295   164   297 0.93 EamA-like transporter family
TPT                  PF03151.11   153 sp|Q08794|YCXC_BACSU -            312   0.00042   20.0  12.9   2   2   1.1e-07   0.00042   20.0  12.9     1   149   155   293   155   294 0.85 Triose-phosphate Transporter family
UAA                  PF08449.6    303 sp|Q08794|YCXC_BACSU -            312   0.00055   18.9  16.1   1   1   1.5e-07   0.00055   18.9  16.1    96   295   102   295    91   304 0.83 UAA transporter family
EmrE                 PF13536.1    113 sp|Q08794|YCXC_BACSU -            312   0.00069   19.7  35.4   2   4   3.4e-06     0.013   15.7   5.0    41   107    76   143    64   152 0.85 Multidrug resistance efflux transporter
EmrE                 PF13536.1    113 sp|Q08794|YCXC_BACSU -            312   0.00069   19.7  35.4   4   4   1.4e-05     0.051   13.7   8.3    30   106   219   297   194   302 0.82 Multidrug resistance efflux transporter
Aminotran_1_2        PF00155.16   363 sp|Q08792|YCXD_BACSU -            444   8.2e-21   74.3   0.0   1   1   1.4e-23   1.1e-20   73.9   0.0    19   361    97   438    81   440 0.87 Aminotransferase class I and II
GntR                 PF00392.16    64 sp|Q08792|YCXD_BACSU -            444   5.8e-13   48.0   0.1   1   1   2.5e-15   1.9e-12   46.4   0.0     6    64     8    66     3    66 0.94 Bacterial regulatory proteins, gntR family
Aminotran_MocR       PF12897.2    425 sp|Q08792|YCXD_BACSU -            444   8.8e-10   37.7   0.0   1   1   1.5e-12   1.2e-09   37.3   0.0   123   231   166   269   107   434 0.80 Alanine-glyoxylate amino-transferase
HTH_41               PF14502.1     48 sp|Q08792|YCXD_BACSU -            444   1.5e-05   24.5   0.1   1   1   9.7e-08   7.6e-05   22.2   0.0     1    37    21    57    21    61 0.94 Helix-turn-helix domain
HTH_36               PF13730.1     55 sp|Q08792|YCXD_BACSU -            444   6.7e-05   22.9   0.0   1   1     5e-07   0.00039   20.4   0.0    13    55    14    56    13    56 0.90 Helix-turn-helix domain
MarR                 PF01047.17    59 sp|Q08792|YCXD_BACSU -            444   7.1e-05   22.4   0.1   1   2   1.3e-05      0.01   15.4   0.0    18    51    27    60    18    63 0.88 MarR family
HTH_11               PF08279.7     55 sp|Q08792|YCXD_BACSU -            444   9.8e-05   21.9   0.3   1   1     1e-06   0.00078   19.0   0.1    17    54    28    64    21    65 0.93 HTH domain
MarR_2               PF12802.2     62 sp|Q08792|YCXD_BACSU -            444    0.0007   19.2   0.4   1   2   6.8e-06    0.0053   16.4   0.0    22    55    26    60    20    63 0.85 MarR family
HTH_27               PF13463.1     68 sp|Q08792|YCXD_BACSU -            444   0.00079   19.6   0.1   1   1   6.8e-06    0.0053   17.0   0.0    18    48    26    56    13    64 0.87 Winged helix DNA-binding domain
HTH_Crp_2            PF13545.1     76 sp|Q08792|YCXD_BACSU -            444    0.0017   18.1   0.0   1   2   0.00012     0.095   12.5   0.0    30    59    28    57     6    70 0.79 Crp-like helix-turn-helix domain
Rrf2                 PF02082.15    83 sp|Q08792|YCXD_BACSU -            444    0.0031   17.5   0.4   1   1   1.1e-05    0.0087   16.1   0.1    19    59    20    60     8    73 0.83 Transcriptional regulator
HTH_24               PF13412.1     48 sp|Q08792|YCXD_BACSU -            444    0.0038   16.5   0.1   1   2   9.3e-05     0.073   12.4   0.1    19    47    28    56    21    57 0.92 Winged helix-turn-helix DNA-binding
Fe_dep_repress       PF01325.14    60 sp|Q08792|YCXD_BACSU -            444    0.0047   16.8   0.2   1   1   4.6e-05     0.036   14.0   0.2    17    59    21    63     8    64 0.90 Iron dependent repressor, N-terminal DNA binding domain
HTH_IclR             PF09339.5     52 sp|Q08792|YCXD_BACSU -            444    0.0093   15.5   0.1   1   1   3.5e-05     0.028   14.0   0.1    19    49    26    57     5    60 0.87 IclR helix-turn-helix domain
HTH_DeoR             PF08220.7     57 sp|Q08792|YCXD_BACSU -            444     0.014   14.8   0.1   1   1   4.9e-05     0.038   13.5   0.1    16    44    28    56    10    59 0.88 DeoR-like helix-turn-helix domain
HTH_Tnp_4            PF13613.1     53 sp|Q08792|YCXD_BACSU -            444      0.03   13.8   0.0   1   1   0.00013       0.1   12.1   0.0    23    44    30    51    27    53 0.89 Helix-turn-helix of DDE superfamily endonuclease
HTH_psq              PF05225.11    45 sp|Q08792|YCXD_BACSU -            444     0.054   13.0   1.3   1   2   0.00048      0.37   10.3   0.0    18    39    28    49    20    53 0.90 helix-turn-helix, Psq domain
TrmB                 PF01978.14    68 sp|Q08792|YCXD_BACSU -            444     0.057   13.1   0.3   1   1   0.00025      0.19   11.4   0.3    25    60    29    65    27    70 0.86 Sugar-specific transcriptional regulator TrmB
DUF3452              PF11934.3    139 sp|Q08792|YCXD_BACSU -            444     0.094   12.0   0.0   1   1   0.00062      0.48    9.7   0.0    12    66   197   251   191   253 0.92 Domain of unknown function (DUF3452)
DLH                  PF01738.13   218 sp|O31482|YCZH_BACSU -            202   3.9e-20   72.0   0.0   1   1     2e-23   5.1e-20   71.7   0.0    13   199     3   175     2   183 0.77 Dienelactone hydrolase family
Abhydrolase_5        PF12695.2    145 sp|O31482|YCZH_BACSU -            202   1.6e-07   31.2   0.0   1   1   7.7e-11   1.9e-07   30.9   0.0     1   109     6   129     6   159 0.77 Alpha/beta hydrolase family
Abhydrolase_6        PF12697.2    228 sp|O31482|YCZH_BACSU -            202    0.0032   17.3   0.0   1   1   1.4e-06    0.0035   17.2   0.0     1    89     7   103     7   175 0.77 Alpha/beta hydrolase family
DUF726               PF05277.7    345 sp|O31482|YCZH_BACSU -            202    0.0096   14.8   0.0   1   1   5.7e-06     0.014   14.2   0.0   199   238    61    99    52   105 0.87 Protein of unknown function (DUF726)
PE-PPE               PF08237.6    225 sp|O31482|YCZH_BACSU -            202     0.012   15.0   0.0   1   1   6.7e-06     0.017   14.5   0.0    20    62    55    95    34   101 0.85 PE-PPE domain
Abhydrolase_2        PF02230.11   216 sp|O31482|YCZH_BACSU -            202      0.06   12.7   0.1   1   1   3.7e-05     0.092   12.1   0.1    69   121    45    97    43   169 0.80 Phospholipase/Carboxylesterase
Tiny_TM_bacill       PF09680.5     24 sp|C0H3V0|YCZM_BACSU -             29     4e-13   48.5   9.5   1   1   6.1e-17   4.5e-13   48.3   9.5     1    24     3    26     3    26 0.97 Protein of unknown function (Tiny_TM_bacill)
RhodobacterPufX      PF11511.3     67 sp|C0H3V0|YCZM_BACSU -             29      0.35   10.3   3.7   1   1   4.7e-05      0.35   10.2   3.7    27    49     5    27     2    29 0.93 Intrinsic membrane protein PufX
Tiny_TM_bacill       PF09680.5     24 sp|C0H3V1|YCZN_BACSU -             37   1.5e-11   43.4  12.7   1   1   2.6e-15     2e-11   43.1  12.2     2    24    10    34     7    34 0.89 Protein of unknown function (Tiny_TM_bacill)
DUF3309              PF11752.3     49 sp|C0H3V1|YCZN_BACSU -             37     0.015   15.0   5.4   1   1   2.4e-06     0.017   14.8   5.4    20    48     3    31     1    32 0.93 Protein of unknown function (DUF3309)
AMP-binding          PF00501.23   417 sp|P96575|YDAB_BACSU -            503   2.4e-92  309.4   0.1   1   1     1e-95   3.1e-92  309.1   0.1    12   416    19   407    11   408 0.84 AMP-binding enzyme
AMP-binding_C        PF13193.1     73 sp|P96575|YDAB_BACSU -            503   9.6e-16   58.5   0.0   1   1     9e-19   2.7e-15   57.0   0.0     2    73   417   490   416   490 0.94 AMP-binding enzyme C-terminal domain
Trigger_C            PF05698.9    162 sp|P96575|YDAB_BACSU -            503    0.0057   16.5   0.0   1   1   3.2e-06    0.0096   15.7   0.0   103   157   448   501   446   503 0.91 Bacterial trigger factor protein (TF) C-terminus
Lipoprotein_3        PF00938.12    87 sp|P96575|YDAB_BACSU -            503      0.03   14.0   0.0   1   1   2.5e-05     0.075   12.8   0.0    35    60   361   386   356   399 0.83 Lipoprotein
AMP-binding_C_2      PF14535.1     96 sp|P96575|YDAB_BACSU -            503     0.081   12.9   0.1   1   1   5.9e-05      0.17   11.9   0.1     1    19   409   427   409   432 0.91 AMP-binding enzyme C-terminal domain
Methyltransf_11      PF08241.7     95 sp|P96576|YDAC_BACSU -            181   1.7e-19   70.1   0.0   1   1   2.9e-22   2.5e-19   69.5   0.0     1    95    31   126    31   126 0.98 Methyltransferase domain
Methyltransf_18      PF12847.2    112 sp|P96576|YDAC_BACSU -            181     1e-13   51.7   0.0   1   1   1.7e-16   1.5e-13   51.3   0.0     2   110    27   127    26   129 0.90 Methyltransferase domain
Methyltransf_31      PF13847.1    152 sp|P96576|YDAC_BACSU -            181   2.6e-13   49.8   0.0   1   1   3.5e-16     3e-13   49.6   0.0     2   111    25   129    24   168 0.86 Methyltransferase domain
Methyltransf_25      PF13649.1    101 sp|P96576|YDAC_BACSU -            181   1.3e-11   44.7   0.0   1   1   2.4e-14   2.1e-11   44.0   0.0     1   101    30   122    30   122 0.89 Methyltransferase domain
Methyltransf_12      PF08242.7     99 sp|P96576|YDAC_BACSU -            181   4.9e-11   42.9   0.0   1   1   9.1e-14     8e-11   42.2   0.0     1    98    31   123    31   124 0.88 Methyltransferase domain
Ubie_methyltran      PF01209.13   233 sp|P96576|YDAC_BACSU -            181   5.3e-10   38.8   0.0   1   1   8.8e-13   7.7e-10   38.2   0.0    38   150    17   125     6   134 0.86 ubiE/COQ5 methyltransferase family
Methyltransf_26      PF13659.1    117 sp|P96576|YDAC_BACSU -            181   1.6e-09   37.7   0.0   1   1   2.6e-12   2.2e-09   37.3   0.0     1   115    27   128    27   130 0.94 Methyltransferase domain
Methyltransf_23      PF13489.1    161 sp|P96576|YDAC_BACSU -            181   3.5e-07   30.0   0.0   1   1   6.1e-10   5.3e-07   29.4   0.0    13   120    19   133     7   161 0.74 Methyltransferase domain
CMAS                 PF02353.15   273 sp|P96576|YDAC_BACSU -            181   4.8e-06   25.8   0.0   1   2   1.2e-08     1e-05   24.7   0.0    52   161    16   123     6   148 0.76 Mycolic acid cyclopropane synthetase
PCMT                 PF01135.14   210 sp|P96576|YDAC_BACSU -            181   0.00053   19.5   0.0   1   1   9.1e-07   0.00079   19.0   0.0    65   124    18    76     4   134 0.88 Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT)
MetW                 PF07021.7    193 sp|P96576|YDAC_BACSU -            181    0.0022   17.4   0.0   1   1   3.2e-06    0.0028   17.0   0.0    11    66    24    84    15   127 0.80 Methionine biosynthesis protein MetW
MTS                  PF05175.9    170 sp|P96576|YDAC_BACSU -            181    0.0059   15.9   0.0   1   1   9.6e-06    0.0084   15.5   0.0    31    81    26    76    16   145 0.89 Methyltransferase small domain
Methyltransf_4       PF02390.12   197 sp|P96576|YDAC_BACSU -            181     0.013   14.5   0.0   1   1     3e-05     0.027   13.5   0.0    22    68    29    75     7    88 0.84 Putative methyltransferase
RrnaAD               PF00398.15   262 sp|P96576|YDAC_BACSU -            181     0.015   14.3   0.0   1   1     2e-05     0.017   14.1   0.0    15    93    11    90     9   132 0.83 Ribosomal RNA adenine dimethylase
Methyltransf_9       PF08003.6    315 sp|P96576|YDAC_BACSU -            181     0.019   13.6   0.0   1   1   4.4e-05     0.038   12.6   0.0   115   191    26   100    15   136 0.69 Protein of unknown function (DUF1698)
Methyltransf_2       PF00891.13   242 sp|P96576|YDAC_BACSU -            181      0.08   12.1   0.0   1   1   0.00012       0.1   11.7   0.0    81   207     7   137     5   156 0.82 O-methyltransferase
Methyltransf_5       PF01795.14   310 sp|P96576|YDAC_BACSU -            181      0.12   11.6   0.0   1   1   0.00027      0.24   10.6   0.0     8    71    14    77    10   102 0.87 MraW methylase family
Acetyltransf_3       PF13302.1    142 sp|P96579|YDAF_BACSU -            183   3.7e-23   82.2   0.0   1   1   1.5e-26   4.3e-23   82.0   0.0     2   141    10   150     9   151 0.85 Acetyltransferase (GNAT) domain
Acetyltransf_4       PF13420.1    155 sp|P96579|YDAF_BACSU -            183   1.9e-15   57.1   0.0   1   1   7.8e-19   2.3e-15   56.8   0.0     1   153    12   169    12   171 0.85 Acetyltransferase (GNAT) domain
Acetyltransf_1       PF00583.19    83 sp|P96579|YDAF_BACSU -            183   8.9e-10   38.4   0.1   1   1   4.8e-13   1.4e-09   37.8   0.1     3    82    74   150    72   151 0.97 Acetyltransferase (GNAT) family
Acetyltransf_8       PF13523.1    152 sp|P96579|YDAF_BACSU -            183   3.4e-06   27.0   0.0   1   1   1.7e-09   5.1e-06   26.4   0.0    76   140    91   154    12   159 0.69 Acetyltransferase (GNAT) domain
Sugar-bind           PF04198.8    255 sp|P96579|YDAF_BACSU -            183      0.11   11.4   0.0   1   1   4.6e-05      0.14   11.0   0.0   164   231    79   144    63   154 0.93 Putative sugar-binding domain
Glyco_tranf_2_3      PF13641.1    228 sp|P96587|YDAM_BACSU -            420   3.3e-39  135.0   0.0   1   1   2.1e-42   4.5e-39  134.5   0.0     1   228    49   279    49   279 0.91 Glycosyltransferase like family 2
Glycos_transf_2      PF00535.21   169 sp|P96587|YDAM_BACSU -            420   1.5e-28   99.5   1.1   1   1   9.1e-32   1.9e-28   99.2   0.1     1   169    52   226    52   226 0.94 Glycosyl transferase family 2
Glyco_trans_2_3      PF13632.1    193 sp|P96587|YDAM_BACSU -            420   1.1e-23   83.9  11.8   1   1   5.1e-27   1.1e-23   83.9  11.8     1   188   137   348   137   395 0.74 Glycosyl transferase family group 2
Glyco_transf_21      PF13506.1    175 sp|P96587|YDAM_BACSU -            420     9e-15   54.3   0.0   1   1     7e-18   1.5e-14   53.6   0.0     6   175   110   278   106   278 0.85 Glycosyl transferase family 21
Glyco_tranf_2_2      PF10111.4    281 sp|P96587|YDAM_BACSU -            420   1.4e-14   53.8   0.1   1   1   1.4e-17     3e-14   52.7   0.0     1   222    52   261    52   297 0.86 Glycosyltransferase like family 2
Glyco_tranf_2_4      PF13704.1     97 sp|P96587|YDAM_BACSU -            420    0.0059   16.9   0.0   1   1   7.1e-06     0.015   15.5   0.0     2    82    59   145    58   147 0.67 Glycosyl transferase family 2
Anp1                 PF03452.9    270 sp|P96587|YDAM_BACSU -            420     0.072   12.2   0.0   1   1   5.1e-05      0.11   11.6   0.0    19    83    42   104    29   150 0.85 Anp1
AA_permease_2        PF13520.1    426 sp|P96589|YDAO_BACSU -            607     5e-35  120.8  43.7   1   1   8.7e-39   6.4e-35  120.4  43.7     4   425    27   447    24   448 0.84 Amino acid permease
TPP_enzyme_N         PF02776.13   172 sp|P96591|YDAP_BACSU -            574   9.3e-50  168.4   0.1   1   2   5.1e-52   9.5e-49  165.1   0.0     2   171     5   173     4   174 0.98 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain
TPP_enzyme_C         PF02775.16   153 sp|P96591|YDAP_BACSU -            574   9.6e-46  155.1   1.3   2   2   3.3e-48   6.2e-45  152.5   0.3     1   153   381   527   381   527 0.98 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain
TPP_enzyme_M         PF00205.17   137 sp|P96591|YDAP_BACSU -            574   3.6e-33  114.2   0.0   1   1   4.6e-36   8.5e-33  113.0   0.0     4   137   196   321   193   321 0.93 Thiamine pyrophosphate enzyme, central domain
DXP_synthase_N       PF13292.1    270 sp|P96591|YDAP_BACSU -            574    0.0016   17.4   0.1   2   2     2e-05     0.038   12.9   0.0   124   195   417   490   373   528 0.70 1-deoxy-D-xylulose-5-phosphate synthase
PAF-AH_p_II          PF03403.8    379 sp|P96591|YDAP_BACSU -            574    0.0042   15.4   0.0   1   1   3.4e-06    0.0064   14.8   0.0   144   268   323   444   319   505 0.81 Platelet-activating factor acetylhydrolase, isoform II
CO_dh                PF02552.11   168 sp|P96591|YDAP_BACSU -            574     0.056   12.9   0.1   1   1   5.7e-05      0.11   12.0   0.1    24   115   192   277   169   283 0.82 CO dehydrogenase beta subunit/acetyl-CoA synthase epsilon subunit
Transgly_assoc       PF04226.8     48 sp|P96594|YDAS_BACSU -             85   3.8e-10   39.6  15.2   2   2     1e-13   3.8e-10   39.6  15.2     1    48    34    79    34    79 0.97 Transglycosylase associated protein
DUF1656              PF07869.7     58 sp|P96594|YDAS_BACSU -             85     0.052   13.3   7.3   2   2     1e-05     0.037   13.8   2.4    17    58    34    77    29    77 0.92 Protein of unknown function (DUF1656)
DUF962               PF06127.6     95 sp|P96594|YDAS_BACSU -             85      0.18   11.7   1.0   1   1   7.6e-05      0.28   11.0   1.0    43    76    24    59     2    78 0.62 Protein of unknown function (DUF962)
Cupin_2              PF07883.6     71 sp|P96597|YDBB_BACSU -            113     3e-13   49.0   0.0   1   1   2.6e-16   4.2e-13   48.5   0.0    12    58    41    88    31   108 0.92 Cupin domain
Cupin_3              PF05899.7     74 sp|P96597|YDBB_BACSU -            113   0.00013   21.2   0.0   1   1   1.5e-07   0.00024   20.3   0.0    19    61    42    84    35   102 0.85 Protein of unknown function (DUF861)
MannoseP_isomer      PF01050.13   151 sp|P96597|YDBB_BACSU -            113   0.00055   19.5   0.0   1   1   4.8e-07   0.00078   19.0   0.0    78   128    42    93    22   109 0.79 Mannose-6-phosphate isomerase
AraC_binding         PF02311.14   136 sp|P96597|YDBB_BACSU -            113   0.00072   19.2   0.0   1   1   5.7e-07   0.00095   18.8   0.0    16    63    40    89    28    93 0.85 AraC-like ligand binding domain
3-HAO                PF06052.7    151 sp|P96597|YDBB_BACSU -            113    0.0017   17.7   0.0   1   1   1.4e-06    0.0023   17.3   0.0    48   112    43   104     3   109 0.83 3-hydroxyanthranilic acid dioxygenase
Cupin_6              PF12852.2    186 sp|P96597|YDBB_BACSU -            113    0.0039   16.8   0.0   1   1   2.6e-06    0.0043   16.6   0.0    22    88    36   100    22   112 0.76 Cupin
EutQ                 PF06249.7    152 sp|P96597|YDBB_BACSU -            113    0.0065   16.0   0.0   1   1   4.5e-06    0.0075   15.8   0.0    89   129    40    83    14    97 0.84 Ethanolamine utilisation protein EutQ
Cupin_1              PF00190.17   144 sp|P96597|YDBB_BACSU -            113     0.012   15.0   0.0   1   1   8.3e-06     0.014   14.8   0.0    47   105    40    88    10   110 0.84 Cupin
FdtA                 PF05523.6    131 sp|P96597|YDBB_BACSU -            113     0.023   14.2   0.0   1   1     2e-05     0.033   13.6   0.0    47    99    41    89     1   102 0.77 WxcM-like, C-terminal
UPF0118              PF01594.11   327 sp|P96604|YDBI_BACSU -            350   5.4e-63  212.9  47.7   1   1   4.1e-67   6.1e-63  212.7  47.7     4   326    16   334    13   335 0.95 Domain of unknown function DUF20
ABC_tran             PF00005.22   137 sp|P96605|YDBJ_BACSU -            308   7.5e-32  110.4   0.4   1   1   5.9e-34   2.7e-31  108.7   0.0     1   137    21   162    21   162 0.97 ABC transporter
AAA_21               PF13304.1    303 sp|P96605|YDBJ_BACSU -            308   5.9e-17   62.5   1.0   1   2   2.2e-07   9.9e-05   22.4   0.5     2    25    34    59    33    94 0.77 AAA domain
AAA_21               PF13304.1    303 sp|P96605|YDBJ_BACSU -            308   5.9e-17   62.5   1.0   2   2     2e-12   8.9e-10   38.9   0.0   194   297   112   192    67   196 0.74 AAA domain
AAA_10               PF12846.2    304 sp|P96605|YDBJ_BACSU -            308   1.7e-05   24.4   0.1   1   2   0.00058      0.26   10.6   0.0     6    44    36    76    33    89 0.69 AAA-like domain
AAA_10               PF12846.2    304 sp|P96605|YDBJ_BACSU -            308   1.7e-05   24.4   0.1   2   2   0.00026      0.12   11.8   0.0   215   268   146   199   110   219 0.84 AAA-like domain
AAA_15               PF13175.1    415 sp|P96605|YDBJ_BACSU -            308   6.4e-05   22.1   0.2   1   2   0.00046      0.21   10.6   0.1    17    43    25    69    12   122 0.65 AAA ATPase domain
AAA_15               PF13175.1    415 sp|P96605|YDBJ_BACSU -            308   6.4e-05   22.1   0.2   2   2   0.00096      0.43    9.5   0.0   372   410   154   192   144   193 0.93 AAA ATPase domain
MobB                 PF03205.9    140 sp|P96605|YDBJ_BACSU -            308   0.00023   20.8   0.2   1   1   1.5e-06   0.00068   19.3   0.0     2    44    33    73    32    85 0.82 Molybdopterin guanine dinucleotide synthesis protein B
UPF0079              PF02367.12   123 sp|P96605|YDBJ_BACSU -            308    0.0014   18.2   0.5   1   1   6.7e-06     0.003   17.1   0.1     5    46    21    63    17    79 0.80 Uncharacterised P-loop hydrolase UPF0079
AAA_14               PF13173.1    128 sp|P96605|YDBJ_BACSU -            308    0.0017   18.2   0.0   1   2   6.1e-05     0.027   14.3   0.0     2    87    31   113    30   130 0.72 AAA domain
AAA_23               PF13476.1    202 sp|P96605|YDBJ_BACSU -            308    0.0019   18.5   3.3   1   1   1.3e-05    0.0058   16.9   3.3    20    68    32    96    13   306 0.68 AAA domain
ArgK                 PF03308.11   267 sp|P96605|YDBJ_BACSU -            308    0.0021   16.8   0.1   1   1   8.8e-06    0.0039   15.9   0.1    14    60    16    62     2    69 0.85 ArgK protein
DUF258               PF03193.11   161 sp|P96605|YDBJ_BACSU -            308    0.0024   17.0   0.0   1   1   9.8e-06    0.0044   16.2   0.0    22    83    17    77     7   110 0.76 Protein of unknown function, DUF258
Arch_ATPase          PF01637.13   234 sp|P96605|YDBJ_BACSU -            308    0.0033   17.1   0.1   1   1   2.2e-05    0.0098   15.6   0.1    17    49    30    60    18   121 0.72 Archaeal ATPase
AAA_22               PF13401.1    131 sp|P96605|YDBJ_BACSU -            308    0.0036   17.4   0.4   1   1   9.8e-05     0.044   13.9   0.2     5   118    32   186    26   197 0.54 AAA domain
NTPase_1             PF03266.10   168 sp|P96605|YDBJ_BACSU -            308    0.0041   16.8   1.0   1   1   4.1e-05     0.019   14.7   0.1     2    34    34    68    33    79 0.86 NTPase
AAA_16               PF13191.1    185 sp|P96605|YDBJ_BACSU -            308    0.0042   17.0   0.0   1   1   1.7e-05    0.0075   16.2   0.0    23    78    30    80    18   208 0.71 AAA ATPase domain
AAA_19               PF13245.1     76 sp|P96605|YDBJ_BACSU -            308     0.005   16.5   0.0   1   1   2.7e-05     0.012   15.3   0.0    12    37    33    57    24    70 0.80 Part of AAA domain
AAA_29               PF13555.1     62 sp|P96605|YDBJ_BACSU -            308    0.0051   16.3   0.2   1   1   2.6e-05     0.012   15.1   0.2    22    40    30    48    20    62 0.78 P-loop containing region of AAA domain
AAA                  PF00004.24   132 sp|P96605|YDBJ_BACSU -            308    0.0079   16.3   0.0   1   1   5.1e-05     0.023   14.8   0.0     3    35    36    68    34    92 0.74 ATPase family associated with various cellular activities (AAA)
KaiC                 PF06745.8    227 sp|P96605|YDBJ_BACSU -            308     0.011   14.8   0.3   1   1     6e-05     0.027   13.5   0.3     5   127     8   134     6   151 0.82 KaiC
Thymidylate_kin      PF02223.12   186 sp|P96605|YDBJ_BACSU -            308     0.011   15.1   0.0   1   1   5.1e-05     0.023   14.0   0.0     3   138    38   169    37   217 0.72 Thymidylate kinase
NACHT                PF05729.7    166 sp|P96605|YDBJ_BACSU -            308     0.012   15.2   0.0   1   1   6.6e-05      0.03   14.0   0.0     4    27    35    58    32    74 0.89 NACHT domain
T2SE                 PF00437.15   272 sp|P96605|YDBJ_BACSU -            308     0.015   14.1   0.5   1   1   6.2e-05     0.028   13.3   0.5   114   157    17    60     6    66 0.84 Type II/IV secretion system protein
AAA_25               PF13481.1    194 sp|P96605|YDBJ_BACSU -            308     0.023   14.0   0.4   1   1   0.00048      0.21   10.9   0.4    28   188    27   192     5   196 0.57 AAA domain
cobW                 PF02492.14   178 sp|P96605|YDBJ_BACSU -            308      0.03   13.7   0.5   1   1   0.00016     0.073   12.5   0.5     3    23    34    56    32   136 0.83 CobW/HypB/UreG, nucleotide-binding domain
SMC_N                PF02463.14   220 sp|P96605|YDBJ_BACSU -            308     0.033   13.4   0.3   1   1    0.0004      0.18   11.0   0.1    23    45    30    52    16    72 0.78 RecF/RecN/SMC N terminal domain
AAA_33               PF13671.1    143 sp|P96605|YDBJ_BACSU -            308     0.038   13.8   0.0   1   1   0.00027      0.12   12.2   0.0     4    21    36    53    33   192 0.73 AAA domain
KAP_NTPase           PF07693.9    325 sp|P96605|YDBJ_BACSU -            308     0.045   12.7   0.0   1   1   0.00011     0.048   12.6   0.0     7    48    19    69    16   239 0.81 KAP family P-loop domain
AAA_5                PF07728.9    139 sp|P96605|YDBJ_BACSU -            308     0.048   13.3   0.0   1   1   0.00025      0.11   12.1   0.0     4    39    36    71    34    87 0.79 AAA domain (dynein-related subfamily)
AAA_18               PF13238.1    129 sp|P96605|YDBJ_BACSU -            308     0.054   13.8   0.2   1   1   0.00071      0.32   11.3   0.0     1    30    34    63    34   123 0.77 AAA domain
AAA_30               PF13604.1    196 sp|P96605|YDBJ_BACSU -            308     0.055   13.0   0.0   1   1   0.00034      0.15   11.6   0.0    20    54    33    67    21   162 0.85 AAA domain
NB-ARC               PF00931.17   287 sp|P96605|YDBJ_BACSU -            308     0.084   11.7   0.6   1   1   0.00037      0.16   10.7   0.6     7    40    19    52    14    62 0.83 NB-ARC domain
AA_synth             PF06684.6    175 sp|P96605|YDBJ_BACSU -            308     0.085   12.2   0.0   1   1    0.0004      0.18   11.1   0.0    24    97    76   152    61   156 0.85 Amino acid synthesis
AAA_17               PF13207.1    121 sp|P96605|YDBJ_BACSU -            308      0.12   13.2   0.7   1   1   0.00054      0.24   12.2   0.6     1    22    33    54    33   243 0.83 AAA domain
Acyl-CoA_dh_2        PF08028.6    134 sp|P96608|YDBM_BACSU -            381   8.6e-18   64.8   0.0   1   1   4.6e-21   1.7e-17   63.9   0.0     3   126   242   360   240   364 0.95 Acyl-CoA dehydrogenase, C-terminal domain
Acyl-CoA_dh_1        PF00441.19   150 sp|P96608|YDBM_BACSU -            381   1.5e-14   54.3   0.0   1   1   8.1e-18     3e-14   53.3   0.0    18   130   242   359   240   361 0.93 Acyl-CoA dehydrogenase, C-terminal domain
Acyl-CoA_dh_N        PF02771.11   113 sp|P96608|YDBM_BACSU -            381     2e-13   50.9   0.1   1   1   1.5e-16   5.5e-13   49.4   0.1     2    89     8    94     7   102 0.89 Acyl-CoA dehydrogenase, N-terminal domain
Acyl-CoA_dh_M        PF02770.14    52 sp|P96608|YDBM_BACSU -            381     9e-09   34.7   1.0   1   2   8.2e-12     3e-08   33.0   0.3     3    49   124   172   122   175 0.96 Acyl-CoA dehydrogenase, middle domain
Cation_efflux        PF01545.16   285 sp|P96610|YDBO_BACSU -            290   6.7e-63  212.4   2.3   1   1     5e-67   7.5e-63  212.2   2.3     2   282    15   288    14   290 0.94 Cation efflux family
Thioredoxin          PF00085.15   104 sp|P96611|YDBP_BACSU -            106   4.7e-20   71.2   0.1   1   1   4.1e-23     5e-20   71.1   0.1     4   103     4   103     1   104 0.91 Thioredoxin
Thioredoxin_3        PF13192.1     76 sp|P96611|YDBP_BACSU -            106   1.5e-06   27.9   0.0   1   1   1.8e-09   2.3e-06   27.3   0.0     5    73    22    99    18   102 0.68 Thioredoxin domain
Thioredoxin_2        PF13098.1    112 sp|P96611|YDBP_BACSU -            106     2e-06   27.9   0.2   1   1   1.2e-07   0.00015   21.9   0.2     5   100    17    87    13   101 0.71 Thioredoxin-like domain
Thioredoxin_8        PF13905.1     95 sp|P96611|YDBP_BACSU -            106   2.3e-06   27.6   0.2   1   2   4.9e-06    0.0061   16.6   0.1     4    36    20    52    17    54 0.87 Thioredoxin-like
Thioredoxin_8        PF13905.1     95 sp|P96611|YDBP_BACSU -            106   2.3e-06   27.6   0.2   2   2   0.00017      0.21   11.7   0.0    58    91    48    79    44    83 0.81 Thioredoxin-like
Thioredoxin_9        PF14595.1    129 sp|P96611|YDBP_BACSU -            106   1.1e-05   24.9   0.1   1   1   1.1e-08   1.3e-05   24.7   0.1    27   123     5    99     1   104 0.70 Thioredoxin
Thioredoxin_7        PF13899.1     82 sp|P96611|YDBP_BACSU -            106   5.5e-05   23.0   0.1   1   1   1.8e-07   0.00022   21.1   0.1     7    36     7    36     3    79 0.91 Thioredoxin-like
DUF953               PF06110.6    119 sp|P96611|YDBP_BACSU -            106   0.00017   21.0   0.1   1   1   8.5e-06     0.011   15.2   0.1    12   117    10   101     1   103 0.60 Eukaryotic protein of unknown function (DUF953)
Phosducin            PF02114.11   265 sp|P96611|YDBP_BACSU -            106   0.00096   17.9   0.0   1   1   8.4e-07     0.001   17.8   0.0   130   218     4    90     1   104 0.84 Phosducin
HyaE                 PF07449.6    107 sp|P96611|YDBP_BACSU -            106    0.0045   16.8   0.0   1   1   4.6e-06    0.0057   16.5   0.0    39    98    28    86     3    91 0.79 Hydrogenase-1 expression protein HyaE
AhpC-TSA             PF00578.16   124 sp|P96611|YDBP_BACSU -            106    0.0051   16.4   0.1   1   1   1.2e-05     0.014   15.0   0.1    22    58    12    49     2    90 0.84 AhpC/TSA family
DIM1                 PF02966.11   133 sp|P96611|YDBP_BACSU -            106    0.0089   15.5   0.0   1   1   7.9e-06    0.0098   15.4   0.0     3    83     2    79     1    96 0.81 Mitosis protein DIM1
Redoxin              PF08534.5    146 sp|P96611|YDBP_BACSU -            106     0.026   14.0   0.0   1   1   2.8e-05     0.035   13.6   0.0    26    61    15    49     3   103 0.90 Redoxin
bPH_2                PF03703.9     80 sp|P96615|YDBS_BACSU -            159   3.4e-15   55.8   0.0   1   1   2.2e-18   5.5e-15   55.1   0.0     4    80    75   148    72   148 0.95 Bacterial PH domain
MFS_1                PF07690.11   352 sp|P96615|YDBS_BACSU -            159     0.011   14.4   1.0   1   1   4.6e-06     0.011   14.4   1.0   134   178    26    72    22   130 0.72 Major Facilitator Superfamily
2TM                  PF13239.1     83 sp|P96615|YDBS_BACSU -            159     0.013   15.5   1.5   1   1     7e-06     0.017   15.1   1.5    11    73    13    76     2    85 0.75 2TM domain
Mg_trans_NIPA        PF05653.9    300 sp|P96615|YDBS_BACSU -            159      0.04   12.8   2.3   1   1     2e-05     0.051   12.5   2.3    81   193    26   136    21   145 0.81 Magnesium transporter NIPA
DUF2892              PF11127.3     66 sp|P96615|YDBS_BACSU -            159      0.41   10.5   3.9   1   1   0.00038      0.94    9.3   3.9    11    49    23    62    19    64 0.78 Protein of unknown function (DUF2892)
PepSY_TM_2           PF13703.1     88 sp|P96615|YDBS_BACSU -            159         2    8.6   8.6   2   2    0.0002      0.49   10.5   2.6    15    53    44    81    37    98 0.89 PepSY-associated TM helix
bPH_2                PF03703.9     80 sp|P96616|YDBT_BACSU -            493   1.5e-47  159.5   6.5   1   3   1.5e-22   3.7e-19   68.4   0.3     1    79    67   146    67   147 0.97 Bacterial PH domain
bPH_2                PF03703.9     80 sp|P96616|YDBT_BACSU -            493   1.5e-47  159.5   6.5   2   3   5.9e-18   1.4e-14   53.8   0.1     1    72   258   336   256   344 0.87 Bacterial PH domain
bPH_2                PF03703.9     80 sp|P96616|YDBT_BACSU -            493   1.5e-47  159.5   6.5   3   3   1.3e-13   3.2e-10   39.8   0.1     1    80   406   486   406   486 0.96 Bacterial PH domain
bPH_4                PF06713.6     74 sp|P96616|YDBT_BACSU -            493   0.00016   21.4   3.2   1   2   1.5e-05     0.036   13.9   0.0     2    51    71   122    70   133 0.82 Bacterial PH domain
XkdN                 PF08890.6    136 sp|P96616|YDBT_BACSU -            493     0.014   15.1   0.2   1   1   1.2e-05      0.03   14.0   0.2    16    80   111   174    99   207 0.75 Phage XkdN-like protein
DUF2207              PF09972.4    511 sp|P96616|YDBT_BACSU -            493       2.5    6.5  10.8   2   3   1.3e-05     0.033   12.7   1.5   355   449   150   258    60   274 0.64 Predicted membrane protein (DUF2207)
Rhomboid             PF01694.17   146 sp|P96617|YDCA_BACSU -            199   2.5e-38  131.3  15.0   2   2     5e-42   2.5e-38  131.3  15.0     3   145    54   195    52   196 0.89 Rhomboid family
DUF1751              PF08551.5     99 sp|P96617|YDCA_BACSU -            199      0.65   10.3   0.1   2   3   0.00013      0.65   10.3   0.1     9    71    59   121    57   140 0.86 Eukaryotic integral membrane protein (DUF1751)
EVE                  PF01878.13   143 sp|P96624|YDCG_BACSU -            146   2.2e-15   56.9   0.0   1   1   1.7e-19   2.5e-15   56.7   0.0     1   142     4   135     4   136 0.89 EVE domain
Lysozyme_like        PF13702.1    160 sp|P96645|YDDH_BACSU -            329   6.6e-48  162.2   0.0   1   1   4.6e-51   1.4e-47  161.1   0.0     3   160    55   192    53   192 0.96 Lysozyme-like
NLPC_P60             PF00877.14   105 sp|P96645|YDDH_BACSU -            329   1.3e-34  118.1   0.1   1   1   9.6e-38   2.9e-34  117.0   0.1     1   103   221   325   221   327 0.96 NlpC/P60 family
SLT                  PF01464.15   121 sp|P96645|YDDH_BACSU -            329   1.2e-08   34.4   0.0   1   1   3.4e-11     1e-07   31.4   0.0    60   117   103   160    63   163 0.89 Transglycosylase SLT domain
DUF830               PF05708.7    158 sp|P96645|YDDH_BACSU -            329     0.056   13.4   0.0   1   2   0.00022      0.65    9.9   0.0    82   137   209   264   187   280 0.82 Orthopoxvirus protein of unknown function (DUF830)
Isochorismatase      PF00857.15   174 sp|P96654|YDDQ_BACSU -            180   6.2e-41  140.2   1.1   1   1   4.7e-45   6.9e-41  140.0   1.1     1   173     3   176     3   177 0.95 Isochorismatase family
Lactamase_B_2        PF12706.2    194 sp|P96655|YDDR_BACSU -            254   2.4e-16   59.8   0.6   1   1   5.9e-20   2.9e-16   59.5   0.6     2   194    19   217    18   217 0.75 Beta-lactamase superfamily domain
Lactamase_B_3        PF13483.1    163 sp|P96655|YDDR_BACSU -            254   5.2e-09   36.0   0.8   1   1   1.3e-12   6.4e-09   35.7   0.8     2   154     3   207     2   216 0.76 Beta-lactamase superfamily domain
Lactamase_B          PF00753.22   194 sp|P96655|YDDR_BACSU -            254   4.7e-06   26.3   0.5   1   2   2.7e-09   1.3e-05   24.9   0.1     6    60     7    77     4    79 0.90 Metallo-beta-lactamase superfamily
MFS_1                PF07690.11   352 sp|P96656|YDDS_BACSU -            436     3e-28   98.5  55.1   1   2   2.7e-17   7.9e-14   51.1  27.8    16   234    53   279    38   285 0.72 Major Facilitator Superfamily
MFS_1                PF07690.11   352 sp|P96656|YDDS_BACSU -            436     3e-28   98.5  55.1   2   2     7e-19   2.1e-15   56.3  23.5     4   174   260   431   257   436 0.88 Major Facilitator Superfamily
Sugar_tr             PF00083.19   451 sp|P96656|YDDS_BACSU -            436   3.6e-08   32.4  41.2   1   3   3.1e-09   9.3e-06   24.4  13.3    44   189    67   211    18   239 0.83 Sugar (and other) transporter
Sugar_tr             PF00083.19   451 sp|P96656|YDDS_BACSU -            436   3.6e-08   32.4  41.2   3   3   1.3e-07   0.00037   19.1  10.8    47   187   288   424   277   429 0.86 Sugar (and other) transporter
MFS_2                PF13347.1    428 sp|P96656|YDDS_BACSU -            436   1.7e-07   30.0  22.5   1   2   3.7e-07    0.0011   17.4   5.5   225   331    34   141    28   148 0.92 MFS/sugar transport protein
MFS_2                PF13347.1    428 sp|P96656|YDDS_BACSU -            436   1.7e-07   30.0  22.5   2   2   5.6e-08   0.00016   20.1   6.7   135   344   155   371   149   408 0.73 MFS/sugar transport protein
TRI12                PF06609.8    599 sp|P96656|YDDS_BACSU -            436   5.8e-05   21.4   3.6   1   2     2e-08   5.8e-05   21.4   3.6    70   150    60   142    41   222 0.82 Fungal trichothecene efflux pump (TRI12)
DJ-1_PfpI            PF01965.19   147 sp|P96658|YDEA_BACSU -            197   3.2e-19   68.8   0.0   1   1   5.1e-23   3.8e-19   68.6   0.0     7   146    35   165    29   166 0.82 DJ-1/PfpI family
DUF4066              PF13278.1    166 sp|P96658|YDEA_BACSU -            197   1.6e-11   43.7   0.0   1   1   2.9e-15   2.2e-11   43.3   0.0    21   154    21   152     9   158 0.88 Putative amidotransferase
CarD_CdnL_TRCF       PF02559.11    98 sp|P96659|YDEB_BACSU -            153   7.9e-23   80.3   0.1   1   1     8e-27   1.2e-22   79.7   0.1     1    98     1   111     1   111 0.97 CarD-like/TRCF domain
EamA                 PF00892.15   126 sp|P96661|YDED_BACSU -            319   2.5e-39  134.1  33.8   1   2   4.8e-24   3.5e-20   72.3   6.0     2   126    19   149    18   149 0.91 EamA-like transporter family
EamA                 PF00892.15   126 sp|P96661|YDED_BACSU -            319   2.5e-39  134.1  33.8   2   2   1.3e-23   9.9e-20   70.8  16.7     1   124   171   294   171   296 0.95 EamA-like transporter family
Aminotran_1_2        PF00155.16   363 sp|P96663|YDEF_BACSU -            462   4.6e-23   81.7   0.0   1   1   3.3e-26     6e-23   81.3   0.0    50   358   151   449   112   454 0.85 Aminotransferase class I and II
GntR                 PF00392.16    64 sp|P96663|YDEF_BACSU -            462   2.2e-13   49.3   0.0   1   1   4.9e-16     9e-13   47.4   0.0     2    64    25    87    24    87 0.98 Bacterial regulatory proteins, gntR family
Aminotran_MocR       PF12897.2    425 sp|P96663|YDEF_BACSU -            462   0.00064   18.3   0.0   1   2   9.6e-07    0.0018   16.9   0.0   165   205   231   271   194   321 0.76 Alanine-glyoxylate amino-transferase
Cys_Met_Meta_PP      PF01053.15   386 sp|P96663|YDEF_BACSU -            462    0.0015   16.8   0.0   1   1   1.2e-06    0.0022   16.3   0.0    71   180   168   281   118   292 0.76 Cys/Met metabolism PLP-dependent enzyme
Beta_elim_lyase      PF01212.16   290 sp|P96663|YDEF_BACSU -            462    0.0022   17.1   0.0   1   1   1.8e-06    0.0034   16.5   0.0    43   165   166   279   108   285 0.85 Beta-eliminating lyase
HTH_24               PF13412.1     48 sp|P96663|YDEF_BACSU -            462     0.023   14.0   0.0   1   1     4e-05     0.074   12.4   0.0    19    47    49    77    48    78 0.94 Winged helix-turn-helix DNA-binding
MarR_2               PF12802.2     62 sp|P96663|YDEF_BACSU -            462      0.12   12.1   0.0   1   1   0.00036      0.67    9.6   0.0    23    55    49    81    33    84 0.85 MarR family
Pyridoxal_deC        PF00282.14   373 sp|P96663|YDEF_BACSU -            462      0.17   10.3   0.0   1   1   0.00017      0.31    9.4   0.0   154   233   204   281   196   282 0.85 Pyridoxal-dependent decarboxylase conserved domain
MFS_1                PF07690.11   352 sp|P96664|YDEG_BACSU -            430   3.4e-26   91.7  65.5   1   2   1.1e-22   3.1e-19   68.8  30.3    16   272    53   315    36   315 0.74 Major Facilitator Superfamily
MFS_1                PF07690.11   352 sp|P96664|YDEG_BACSU -            430   3.4e-26   91.7  65.5   2   2   5.9e-13   1.8e-09   36.8  27.2     6   170   261   426   253   430 0.85 Major Facilitator Superfamily
TRI12                PF06609.8    599 sp|P96664|YDEG_BACSU -            430   8.2e-07   27.6   3.8   1   2   2.8e-10   8.2e-07   27.6   3.8    72   162    63   155     4   188 0.74 Fungal trichothecene efflux pump (TRI12)
MFS_2                PF13347.1    428 sp|P96664|YDEG_BACSU -            430   1.7e-06   26.7  24.3   1   2   3.3e-08   9.8e-05   20.9   3.3   224   330    33   140    22   145 0.92 MFS/sugar transport protein
MFS_2                PF13347.1    428 sp|P96664|YDEG_BACSU -            430   1.7e-06   26.7  24.3   2   2   1.1e-05     0.032   12.6  11.7   134   379   154   402   152   413 0.71 MFS/sugar transport protein
Sugar_tr             PF00083.19   451 sp|P96664|YDEG_BACSU -            430   0.00054   18.6  10.0   1   2   1.8e-07   0.00054   18.6  10.0    45   154    68   176    14   233 0.85 Sugar (and other) transporter
Folate_carrier       PF01770.13   412 sp|P96664|YDEG_BACSU -            430     0.022   13.3   0.7   1   1   1.9e-05     0.056   11.9   0.7   283   352    67   137    21   176 0.87 Reduced folate carrier
EamA                 PF00892.15   126 sp|P96668|YDEK_BACSU -            287   1.6e-26   92.7  29.7   1   2   1.3e-16   1.9e-12   47.3   8.8     2   117    17   130    16   140 0.84 EamA-like transporter family
EamA                 PF00892.15   126 sp|P96668|YDEK_BACSU -            287   1.6e-26   92.7  29.7   2   2   6.2e-18   9.1e-14   51.5  12.9     2   121   159   279   158   282 0.95 EamA-like transporter family
GntR                 PF00392.16    64 sp|P96669|YDEL_BACSU -            463   3.5e-15   55.1   0.0   1   2   2.2e-17     4e-14   51.7   0.0     1    63    15    77    15    78 0.99 Bacterial regulatory proteins, gntR family
Aminotran_1_2        PF00155.16   363 sp|P96669|YDEL_BACSU -            463   1.9e-12   46.8   0.0   1   1   1.2e-15   2.3e-12   46.5   0.0    18   362   119   456   104   457 0.80 Aminotransferase class I and II
HTH_11               PF08279.7     55 sp|P96669|YDEL_BACSU -            463   0.00093   18.8   0.2   1   3   1.5e-05     0.028   14.0   0.0    21    54    44    76    38    77 0.94 HTH domain
RPA_C                PF08784.6    102 sp|P96669|YDEL_BACSU -            463    0.0078   16.6   0.0   1   1   3.6e-05     0.067   13.6   0.0    49    95    16    68    12    70 0.78 Replication protein A C terminal
HTH_24               PF13412.1     48 sp|P96669|YDEL_BACSU -            463     0.016   14.6   0.5   1   1   2.7e-05      0.05   12.9   0.0    19    47    40    68    39    69 0.94 Winged helix-turn-helix DNA-binding
Fe_dep_repress       PF01325.14    60 sp|P96669|YDEL_BACSU -            463      0.02   14.7   0.0   1   1   2.7e-05     0.051   13.5   0.0    16    59    32    75    31    76 0.92 Iron dependent repressor, N-terminal DNA binding domain
HTH_Crp_2            PF13545.1     76 sp|P96669|YDEL_BACSU -            463     0.027   14.2   0.0   1   1     6e-05      0.11   12.2   0.0    31    61    41    71    18    76 0.87 Crp-like helix-turn-helix domain
HTH_36               PF13730.1     55 sp|P96669|YDEL_BACSU -            463     0.033   14.2   0.0   1   2   0.00019      0.35   11.0   0.0    25    55    38    68    31    68 0.93 Helix-turn-helix domain
Ser_hydrolase        PF06821.8    171 sp|P96671|YDEN_BACSU -            190   2.4e-44  150.9   0.0   1   1   1.5e-47   2.7e-44  150.7   0.0     1   170     5   182     5   183 0.97 Serine hydrolase
Abhydrolase_6        PF12697.2    228 sp|P96671|YDEN_BACSU -            190   2.2e-10   40.7   0.2   1   2   5.8e-10   1.1e-06   28.7   0.0     2   123     6   116     5   130 0.75 Alpha/beta hydrolase family
Abhydrolase_6        PF12697.2    228 sp|P96671|YDEN_BACSU -            190   2.2e-10   40.7   0.2   2   2   0.00022      0.41   10.4   0.0   181   217   131   166   126   170 0.87 Alpha/beta hydrolase family
Abhydrolase_5        PF12695.2    145 sp|P96671|YDEN_BACSU -            190   1.2e-09   38.0   0.0   1   1   7.9e-13   1.5e-09   37.7   0.0     3   145     6   165     4   165 0.80 Alpha/beta hydrolase family
DUF900               PF05990.7    234 sp|P96671|YDEN_BACSU -            190     0.013   14.7   0.0   1   1   1.1e-05      0.02   14.1   0.0    80   171    47   143    41   180 0.80 Alpha/beta hydrolase of unknown function (DUF900)
Abhydrolase_2        PF02230.11   216 sp|P96671|YDEN_BACSU -            190     0.022   14.1   0.0   1   1   1.7e-05     0.031   13.7   0.0    83   188    36   159     8   173 0.71 Phospholipase/Carboxylesterase
LCAT                 PF02450.10   389 sp|P96671|YDEN_BACSU -            190     0.023   13.6   0.0   1   1   2.5e-05     0.045   12.7   0.0   118   143    62    87    46   109 0.81 Lecithin:cholesterol acyltransferase
DUF1749              PF08538.5    303 sp|P96671|YDEN_BACSU -            190     0.066   12.0   0.0   1   1   4.2e-05     0.078   11.8   0.0   109   192    64   149    47   177 0.88 Protein of unknown function (DUF1749)
FSH1                 PF03959.8    212 sp|P96671|YDEN_BACSU -            190     0.093   12.1   0.1   2   2   0.00047      0.87    8.9   0.1   132   202    87   166    59   168 0.75 Serine hydrolase (FSH1)
DUF161               PF02588.10    82 sp|P96672|YDEO_BACSU -            290   7.3e-23   80.6  32.4   1   2   1.8e-14   6.6e-11   42.3  12.3     2    78    18    95    17    99 0.96 Uncharacterized BCR, YitT family COG1284
DUF161               PF02588.10    82 sp|P96672|YDEO_BACSU -            290   7.3e-23   80.6  32.4   2   2   4.2e-15   1.6e-11   44.3  12.1     2    82   114   194   113   194 0.95 Uncharacterized BCR, YitT family COG1284
DUF2179              PF10035.4     55 sp|P96672|YDEO_BACSU -            290   2.3e-19   68.7   0.5   1   1   1.7e-22   6.4e-19   67.3   0.5     1    55   227   281   227   281 0.98 Uncharacterized protein conserved in bacteria (DUF2179)
EppA_BapA            PF07268.6    139 sp|P96672|YDEO_BACSU -            290     0.021   14.4   0.1   1   1   1.2e-05     0.046   13.4   0.1    65   128   182   245   176   277 0.93 Exported protein precursor (EppA/BapA)
MerC                 PF03203.9    116 sp|P96672|YDEO_BACSU -            290       5.4    7.4  10.4   1   2   7.4e-05      0.27   11.5   3.7    27   108    45   127    35   134 0.77 MerC mercury resistance protein
Flavodoxin_2         PF02525.12   199 sp|P96674|YDEQ_BACSU -            197   2.3e-46  157.8   0.1   1   1   3.6e-50   2.7e-46  157.5   0.1     1   198     4   172     4   173 0.94 Flavodoxin-like fold
FMN_red              PF03358.10   152 sp|P96674|YDEQ_BACSU -            197     8e-06   25.4   0.0   1   1   1.6e-09   1.2e-05   24.8   0.0    56   112    45   107     5   127 0.77 NADPH-dependent FMN reductase
MFS_1                PF07690.11   352 sp|P96675|YDER_BACSU -            395     6e-39  133.7  62.9   1   2   6.9e-36   2.6e-32  111.9  39.8    11   303    30   309    16   313 0.81 Major Facilitator Superfamily
MFS_1                PF07690.11   352 sp|P96675|YDER_BACSU -            395     6e-39  133.7  62.9   2   2   1.5e-10   5.5e-07   28.6  22.3    69   172   288   391   283   395 0.82 Major Facilitator Superfamily
Sugar_tr             PF00083.19   451 sp|P96675|YDER_BACSU -            395   8.1e-07   27.9  14.8   1   3   2.2e-10   8.1e-07   27.9  14.8    46   188    50   185     9   191 0.92 Sugar (and other) transporter
DUF1228              PF06779.9     85 sp|P96675|YDER_BACSU -            395    0.0098   15.9   1.2   1   4   2.6e-06    0.0098   15.9   1.2    14    79    37   102    23   109 0.78 Protein of unknown function (DUF1228)
Folate_carrier       PF01770.13   412 sp|P96675|YDER_BACSU -            395      0.94    7.9  11.9   1   2   1.5e-05     0.055   11.9   6.4    53   187    62   195    55   205 0.82 Reduced folate carrier
ArsB                 PF02040.10   423 sp|P96678|YDFA_BACSU -            435  6.9e-238  789.5  42.0   1   1  1.1e-241    8e-238  789.3  42.0     1   423     6   428     6   428 1.00 Arsenical pump membrane protein
CitMHS               PF03600.11   351 sp|P96678|YDFA_BACSU -            435   2.2e-13   49.5  37.3   1   1   5.6e-17   4.2e-13   48.6  37.3     3   350    10   371     4   372 0.77 Citrate transporter
GNAT_acetyltran      PF12746.2    265 sp|P96679|YDFB_BACSU -            261   3.6e-29  101.4   0.3   1   1   1.1e-32   4.2e-29  101.1   0.3    11   252    13   259     3   261 0.85 GNAT acetyltransferase
FR47                 PF08445.5     86 sp|P96679|YDFB_BACSU -            261   0.00015   21.4   0.0   1   1   7.3e-08   0.00027   20.6   0.0    27    83   199   255   191   258 0.94 FR47-like protein
Acetyltransf_3       PF13302.1    142 sp|P96679|YDFB_BACSU -            261    0.0013   18.9   0.0   1   1   4.3e-07    0.0016   18.6   0.0    80   142   181   250   101   250 0.79 Acetyltransferase (GNAT) domain
Acetyltransf_1       PF00583.19    83 sp|P96679|YDFB_BACSU -            261    0.0041   17.1   0.0   1   1   2.1e-06    0.0079   16.2   0.0    24    83   192   250   164   250 0.87 Acetyltransferase (GNAT) family
EamA                 PF00892.15   126 sp|P96680|YDFC_BACSU -            306   2.1e-42  144.1  38.5   1   2   2.1e-27   1.1e-23   83.6  11.1     2   125    18   139    17   140 0.93 EamA-like transporter family
EamA                 PF00892.15   126 sp|P96680|YDFC_BACSU -            306   2.1e-42  144.1  38.5   2   2   1.1e-22   5.7e-19   68.4  17.3     2   125   161   284   160   285 0.96 EamA-like transporter family
EmrE                 PF13536.1    113 sp|P96680|YDFC_BACSU -            306   2.1e-07   31.1   9.4   1   3   4.3e-11   2.1e-07   31.1   9.4    20   105    50   139    38   143 0.77 Multidrug resistance efflux transporter
TPT                  PF03151.11   153 sp|P96680|YDFC_BACSU -            306    0.0026   17.3   2.3   1   2   5.4e-07    0.0026   17.3   2.3    83   150    74   137    36   138 0.75 Triose-phosphate Transporter family
Aminotran_1_2        PF00155.16   363 sp|P96681|YDFD_BACSU -            482   6.9e-33  114.0   0.0   1   1   6.4e-36   8.6e-33  113.7   0.0     2   358   120   467   119   472 0.87 Aminotransferase class I and II
GntR                 PF00392.16    64 sp|P96681|YDFD_BACSU -            482   4.7e-15   54.7   0.0   1   1   2.2e-17   2.9e-14   52.2   0.0     1    64    14    77    14    77 0.98 Bacterial regulatory proteins, gntR family
Aminotran_MocR       PF12897.2    425 sp|P96681|YDFD_BACSU -            482   4.5e-06   25.4   0.0   1   1   9.5e-09   1.3e-05   23.9   0.0   130   405   211   468   198   481 0.76 Alanine-glyoxylate amino-transferase
HTH_Crp_2            PF13545.1     76 sp|P96681|YDFD_BACSU -            482    0.0012   18.5   0.1   1   1   1.3e-05     0.017   14.9   0.0    30    69    39    80    27    85 0.89 Crp-like helix-turn-helix domain
HTH_36               PF13730.1     55 sp|P96681|YDFD_BACSU -            482    0.0013   18.8   0.0   1   1   2.9e-06    0.0039   17.2   0.0    26    55    38    67    24    67 0.88 Helix-turn-helix domain
HTH_11               PF08279.7     55 sp|P96681|YDFD_BACSU -            482    0.0089   15.6   0.0   1   1   2.4e-05     0.033   13.8   0.0    18    53    40    74    37    75 0.94 HTH domain
MarR_2               PF12802.2     62 sp|P96681|YDFD_BACSU -            482     0.011   15.4   0.0   1   1   1.9e-05     0.026   14.2   0.0    23    55    39    71    13    74 0.82 MarR family
HTH_24               PF13412.1     48 sp|P96681|YDFD_BACSU -            482      0.03   13.6   0.0   1   1   6.2e-05     0.084   12.2   0.0    19    48    39    68    38    68 0.98 Winged helix-turn-helix DNA-binding
MarR                 PF01047.17    59 sp|P96681|YDFD_BACSU -            482     0.087   12.5   0.0   1   1   0.00016      0.22   11.2   0.0    19    48    39    68    35    70 0.94 MarR family
TrmB                 PF01978.14    68 sp|P96681|YDFD_BACSU -            482     0.095   12.4   0.0   1   1   0.00021      0.28   10.9   0.0    26    58    41    73    39    79 0.89 Sugar-specific transcriptional regulator TrmB
Flavin_Reduct        PF01613.13   154 sp|P96682|YDFE_BACSU -            207   1.2e-09   38.2   0.0   1   1     2e-13   1.5e-09   37.8   0.0     5   153    22   195    19   196 0.82 Flavin reductase like domain
Pyridox_oxidase      PF01243.15    89 sp|P96682|YDFE_BACSU -            207   0.00018   21.4   0.0   1   1   3.3e-08   0.00025   21.0   0.0    13    70    24    80     9    97 0.88 Pyridoxamine 5'-phosphate oxidase
MMPL                 PF03176.10   333 sp|P96687|YDFJ_BACSU -            724  8.2e-118  392.9  14.1   1   2     1e-83   5.1e-80  268.6   3.4     2   332    45   361    44   362 0.96 MMPL family
MMPL                 PF03176.10   333 sp|P96687|YDFJ_BACSU -            724  8.2e-118  392.9  14.1   2   2   1.8e-41   8.9e-38  129.8   3.1     5   311   392   690   388   696 0.84 MMPL family
Sterol-sensing       PF12349.3    153 sp|P96687|YDFJ_BACSU -            724   0.00011   21.6   5.8   1   3   2.2e-08   0.00011   21.6   5.8    13   144   203   337   192   346 0.83 Sterol-sensing domain of SREBP cleavage-activation
Patched              PF02460.13   800 sp|P96687|YDFJ_BACSU -            724      0.16    9.8  22.4   1   2   4.6e-06     0.023   12.6  10.9   251   394   197   344   180   372 0.86 Patched family
Cation_efflux        PF01545.16   285 sp|C0SP78|YDFM_BACSU -            297   1.1e-65  221.4   6.2   1   1   1.7e-69   1.3e-65  221.3   6.2     2   282    14   295    13   297 0.98 Cation efflux family
DUF421               PF04239.7     99 sp|P96696|YDFR_BACSU -            225   1.2e-24   85.6   1.3   1   1   2.8e-28   2.1e-24   84.9   1.3     1    93   113   217   113   224 0.84 Protein of unknown function (DUF421)
FlgH                 PF02107.11   180 sp|P96696|YDFR_BACSU -            225      0.13   11.8   0.3   2   2   1.7e-05      0.13   11.8   0.3    89   139   108   160   105   164 0.84 Flagellar L-ring protein
DUF421               PF04239.7     99 sp|P96697|YDFS_BACSU -            235   1.1e-36  124.2   2.5   1   2   1.1e-30   8.5e-27   92.5   0.2     1    76    86   162    86   169 0.93 Protein of unknown function (DUF421)
DUF421               PF04239.7     99 sp|P96697|YDFS_BACSU -            235   1.1e-36  124.2   2.5   2   2     9e-12   6.7e-08   31.9   0.2     8    60   170   221   167   231 0.87 Protein of unknown function (DUF421)
DUF3792              PF12670.2    117 sp|P96697|YDFS_BACSU -            235     0.035   13.9   2.8   2   2   5.8e-06     0.043   13.6   1.9    11    71    32    91    25    97 0.90 Protein of unknown function (DUF3792)
Acetyltransf_1       PF00583.19    83 sp|P96703|YDGE_BACSU -            157   4.2e-15   55.5   0.2   1   1   2.8e-18   5.9e-15   55.0   0.2     3    82    68   145    57   146 0.90 Acetyltransferase (GNAT) family
Acetyltransf_3       PF13302.1    142 sp|P96703|YDGE_BACSU -            157   1.2e-08   35.1   0.3   1   1     7e-12   1.5e-08   34.9   0.3     4   141     5   145     3   146 0.70 Acetyltransferase (GNAT) domain
Acetyltransf_4       PF13420.1    155 sp|P96703|YDGE_BACSU -            157   5.7e-08   32.8   0.2   1   1   3.2e-11   6.7e-08   32.6   0.2    24   137    33   148     5   153 0.88 Acetyltransferase (GNAT) domain
FR47                 PF08445.5     86 sp|P96703|YDGE_BACSU -            157   4.4e-07   29.5   0.0   1   1   3.4e-10   7.1e-07   28.8   0.0    12    80    78   148    59   153 0.89 FR47-like protein
Acetyltransf_7       PF13508.1     79 sp|P96703|YDGE_BACSU -            157     2e-06   27.8   0.1   1   1   1.3e-09   2.8e-06   27.3   0.1     3    77    60   145    58   147 0.77 Acetyltransferase (GNAT) domain
Acetyltransf_10      PF13673.1    117 sp|P96703|YDGE_BACSU -            157   1.7e-05   24.8   0.1   1   1   9.8e-09   2.1e-05   24.6   0.1    25   117    37   145    10   145 0.75 Acetyltransferase (GNAT) domain
Acetyltransf_8       PF13523.1    152 sp|P96703|YDGE_BACSU -            157     0.016   15.1   0.2   1   1   1.2e-05     0.026   14.4   0.2    24   137    33   146    21   151 0.76 Acetyltransferase (GNAT) domain
AA_permease          PF00324.16   478 sp|P96704|YDGF_BACSU -            458  3.3e-110  368.6  47.7   1   1    5e-114  3.7e-110  368.5  47.7     1   469    23   454    23   458 0.97 Amino acid permease
AA_permease_2        PF13520.1    426 sp|P96704|YDGF_BACSU -            458   1.9e-43  148.6  52.7   1   1   3.1e-47   2.3e-43  148.3  52.7     8   422    26   446    22   450 0.85 Amino acid permease
MMPL                 PF03176.10   333 sp|P96706|YDGH_BACSU -            885  2.1e-128  427.7  17.0   1   3   2.1e-81   3.9e-78  262.4   0.2    11   331    45   358    37   360 0.93 MMPL family
MMPL                 PF03176.10   333 sp|P96706|YDGH_BACSU -            885  2.1e-128  427.7  17.0   3   3   2.2e-53   4.1e-50  170.3   5.6     8   320   543   877   533   885 0.83 MMPL family
Reo_sigmaC           PF04582.7    326 sp|P96706|YDGH_BACSU -            885      0.21   10.7   5.3   2   2   0.00021      0.39    9.8   2.8    40   110   530   604   512   625 0.63 Reovirus sigma C capsid protein
FliJ                 PF02050.11   123 sp|P96706|YDGH_BACSU -            885      0.23   11.5   4.1   1   1   0.00026      0.49   10.4   4.1    21    90   521   591   513   598 0.83 Flagellar FliJ protein
Sec20                PF03908.8     92 sp|P96706|YDGH_BACSU -            885       1.2    8.8   8.3   2   2   4.1e-05     0.076   12.7   0.5     5    65   557   617   553   627 0.91 Sec20
Spc7                 PF08317.6    326 sp|P96706|YDGH_BACSU -            885       2.4    6.7   5.7   2   2   0.00031      0.58    8.7   0.8   183   269   522   613   512   617 0.66 Spc7 kinetochore protein
Nitroreductase       PF00881.19   165 sp|P96707|YDGI_BACSU -            209   4.7e-35  120.8   0.0   1   1   4.3e-39   6.4e-35  120.4   0.0     1   165    11   189    11   189 0.92 Nitroreductase family
MFS_1                PF07690.11   352 sp|P96709|YDGK_BACSU -            402   3.4e-42  144.4  41.8   1   1   6.8e-46   3.4e-42  144.4  41.8     3   348    19   359    17   363 0.89 Major Facilitator Superfamily
Sugar_tr             PF00083.19   451 sp|P96709|YDGK_BACSU -            402   7.5e-10   37.9  15.4   1   2   1.5e-13   7.5e-10   37.9  15.4    42   274    43   266    22   272 0.77 Sugar (and other) transporter
MFS_3                PF05977.8    524 sp|P96709|YDGK_BACSU -            402     2e-06   26.2  22.3   1   1   4.2e-10   2.1e-06   26.1  21.4    39   316    41   315    37   336 0.79 Transmembrane secretion effector
TauE                 PF01925.14   240 sp|O05493|YDHB_BACSU -            245   7.8e-37  127.0  45.3   1   1     6e-41   8.9e-37  126.8  45.3     2   238     4   241     2   243 0.91 Sulfite exporter TauE/SafE
UDPGT                PF00201.13   500 sp|O05496|YDHE_BACSU -            395   2.3e-18   66.0   0.0   2   2   1.1e-20   2.7e-17   62.5   0.0   275   419   224   369   206   376 0.87 UDP-glucoronosyl and UDP-glucosyl transferase
Glyco_tran_28_C      PF04101.11   167 sp|O05496|YDHE_BACSU -            395   1.3e-11   44.4   0.1   1   1   8.8e-15   2.2e-11   43.7   0.1    32   153   255   368   222   386 0.87 Glycosyltransferase family 28 C-terminal domain
Glyco_trans_1_3      PF13528.1    318 sp|O05496|YDHE_BACSU -            395   2.2e-05   23.8   0.0   2   2   1.1e-07   0.00028   20.1   0.0   247   317   288   356   279   357 0.93 Glycosyl transferase family 1
Glyco_transf_28      PF03033.15   139 sp|O05496|YDHE_BACSU -            395   0.00063   19.5   0.0   1   1     6e-07    0.0015   18.3   0.0     2    49     5    52     4   103 0.82 Glycosyltransferase family 28 N-terminal domain
Glyco_trans_4_2      PF13477.1    139 sp|O05496|YDHE_BACSU -            395     0.022   14.5   0.1   1   1   1.8e-05     0.044   13.6   0.1     2    78     4   101     3   108 0.67 Glycosyl transferase 4-like
Glyco_hydro_18       PF00704.23   343 sp|O05495|YDHD_BACSU -            420   6.7e-34  117.8   0.0   1   1   1.9e-37   9.2e-34  117.4   0.0    83   340   171   400   144   402 0.91 Glycosyl hydrolases family 18
LysM                 PF01476.15    44 sp|O05495|YDHD_BACSU -            420   2.3e-22   78.6   0.0   1   2   9.6e-13   4.7e-09   35.9   0.0     1    44     4    46     4    46 0.98 LysM domain
LysM                 PF01476.15    44 sp|O05495|YDHD_BACSU -            420   2.3e-22   78.6   0.0   2   2   4.3e-14   2.1e-10   40.3   0.0     1    44    50    93    50    93 0.99 LysM domain
DUF3142              PF11340.3    181 sp|O05495|YDHD_BACSU -            420     0.092   12.3   0.0   1   1   3.3e-05      0.17   11.5   0.0    19    73   182   235   175   255 0.76 Protein of unknown function (DUF3142)
ABC_tran             PF00005.22   137 sp|O05519|YDIF_BACSU -            642   4.9e-54  182.3  12.2   1   2   1.9e-31   5.7e-29  101.1   0.2     1   137    19   191    19   191 0.85 ABC transporter
ABC_tran             PF00005.22   137 sp|O05519|YDIF_BACSU -            642   4.9e-54  182.3  12.2   2   2   1.9e-26     6e-24   84.8   0.0     1   137   343   473   343   473 0.83 ABC transporter
ABC_tran_2           PF12848.2     85 sp|O05519|YDIF_BACSU -            642   2.4e-27   94.5  32.1   1   2   4.5e-28   1.4e-25   88.9   7.8     1    85   230   316   230   316 0.96 ABC transporter
ABC_tran_2           PF12848.2     85 sp|O05519|YDIF_BACSU -            642   2.4e-27   94.5  32.1   2   2   2.2e-05    0.0069   16.2  10.5     1    76   512   586   512   597 0.70 ABC transporter
AAA_21               PF13304.1    303 sp|O05519|YDIF_BACSU -            642   3.2e-21   76.5  18.3   1   4   5.6e-07   0.00017   21.6   0.2     3    23    33    53    32    95 0.77 AAA domain
AAA_21               PF13304.1    303 sp|O05519|YDIF_BACSU -            642   3.2e-21   76.5  18.3   2   4   9.8e-07    0.0003   20.8   0.3   233   303   159   223   115   223 0.84 AAA domain
AAA_21               PF13304.1    303 sp|O05519|YDIF_BACSU -            642   3.2e-21   76.5  18.3   3   4   1.1e-05    0.0035   17.3   0.3     2    25   356   374   355   393 0.77 AAA domain
AAA_21               PF13304.1    303 sp|O05519|YDIF_BACSU -            642   3.2e-21   76.5  18.3   4   4   1.9e-08   5.9e-06   26.4   0.1   198   303   401   505   388   505 0.79 AAA domain
SMC_N                PF02463.14   220 sp|O05519|YDIF_BACSU -            642   1.1e-12   47.6   4.1   1   3   9.5e-09   2.9e-06   26.6   0.2    25   217    30   238     6   241 0.69 RecF/RecN/SMC N terminal domain
SMC_N                PF02463.14   220 sp|O05519|YDIF_BACSU -            642   1.1e-12   47.6   4.1   3   3   0.00072      0.22   10.6   0.0   136   183   444   487   417   514 0.81 RecF/RecN/SMC N terminal domain
DUF258               PF03193.11   161 sp|O05519|YDIF_BACSU -            642   2.1e-10   40.0   0.5   1   2   6.2e-06    0.0019   17.3   0.1    22    68    15    62     3    92 0.82 Protein of unknown function, DUF258
DUF258               PF03193.11   161 sp|O05519|YDIF_BACSU -            642   2.1e-10   40.0   0.5   2   2   7.2e-07   0.00022   20.4   0.1    17    68   333   386   320   406 0.82 Protein of unknown function, DUF258
AAA_22               PF13401.1    131 sp|O05519|YDIF_BACSU -            642   2.7e-09   37.2   0.7   1   2   0.00032     0.098   12.7   0.5     7    68    32    97    26   222 0.70 AAA domain
AAA_22               PF13401.1    131 sp|O05519|YDIF_BACSU -            642   2.7e-09   37.2   0.7   2   2   3.8e-06    0.0012   19.0   0.0     5   108   354   486   350   500 0.74 AAA domain
AAA_29               PF13555.1     62 sp|O05519|YDIF_BACSU -            642   5.8e-09   35.3   0.2   1   2   3.6e-05     0.011   15.2   0.0    19    40    26    46    18    50 0.80 P-loop containing region of AAA domain
AAA_29               PF13555.1     62 sp|O05519|YDIF_BACSU -            642   5.8e-09   35.3   0.2   2   2   7.1e-06    0.0022   17.4   0.2    19    52   350   383   343   389 0.80 P-loop containing region of AAA domain
AAA_16               PF13191.1    185 sp|O05519|YDIF_BACSU -            642   2.4e-08   34.1   3.4   2   2   8.1e-09   2.5e-06   27.6   0.0    22    94   351   428   342   489 0.76 AAA ATPase domain
RNA_helicase         PF00910.17   107 sp|O05519|YDIF_BACSU -            642   3.2e-07   30.4   0.1   1   2   0.00058      0.18   11.9   0.0     1    87    32   121    32   133 0.64 RNA helicase
RNA_helicase         PF00910.17   107 sp|O05519|YDIF_BACSU -            642   3.2e-07   30.4   0.1   2   2   4.3e-05     0.013   15.6   0.0     3    48   358   417   356   421 0.80 RNA helicase
AAA_23               PF13476.1    202 sp|O05519|YDIF_BACSU -            642   3.3e-07   30.8  31.5   1   3    0.0007      0.22   11.8  13.2    22   196    32   298    12   301 0.54 AAA domain
AAA_23               PF13476.1    202 sp|O05519|YDIF_BACSU -            642   3.3e-07   30.8  31.5   2   3    0.0014      0.44   10.8   0.0    22    37   356   371   335   377 0.82 AAA domain
AAA_23               PF13476.1    202 sp|O05519|YDIF_BACSU -            642   3.3e-07   30.8  31.5   3   3   0.00062      0.19   12.0   8.3   101   202   530   635   432   635 0.74 AAA domain
NACHT                PF05729.7    166 sp|O05519|YDIF_BACSU -            642   4.7e-07   29.6   1.2   1   2   0.00042      0.13   11.9   0.1     2    25    31    54    30    62 0.87 NACHT domain
NACHT                PF05729.7    166 sp|O05519|YDIF_BACSU -            642   4.7e-07   29.6   1.2   2   2   2.5e-05    0.0078   15.8   0.1     4    28   357   381   354   526 0.89 NACHT domain
AAA_25               PF13481.1    194 sp|O05519|YDIF_BACSU -            642   9.4e-07   28.4   0.0   2   2   7.4e-06    0.0023   17.3   0.0    26    90   346   408   325   469 0.84 AAA domain
MMR_HSR1             PF01926.18   116 sp|O05519|YDIF_BACSU -            642   1.9e-06   27.8   0.1   1   2   0.00035      0.11   12.4   0.0     1    21    31    51    31   103 0.83 50S ribosome-binding GTPase
MMR_HSR1             PF01926.18   116 sp|O05519|YDIF_BACSU -            642   1.9e-06   27.8   0.1   2   2   0.00082      0.25   11.2   0.0     2    56   356   492   355   601 0.65 50S ribosome-binding GTPase
MobB                 PF03205.9    140 sp|O05519|YDIF_BACSU -            642     2e-06   27.5   0.3   1   2   0.00022     0.067   12.9   0.0     2    33    31    62    30    79 0.83 Molybdopterin guanine dinucleotide synthesis protein B
MobB                 PF03205.9    140 sp|O05519|YDIF_BACSU -            642     2e-06   27.5   0.3   2   2   0.00038      0.12   12.1   0.1     4    27   357   380   355   394 0.87 Molybdopterin guanine dinucleotide synthesis protein B
AAA_10               PF12846.2    304 sp|O05519|YDIF_BACSU -            642   2.2e-06   27.3   1.4   1   3   0.00015     0.047   13.1   0.0     5    34    33    62    31    92 0.88 AAA-like domain
AAA_10               PF12846.2    304 sp|O05519|YDIF_BACSU -            642   2.2e-06   27.3   1.4   3   3    0.0011      0.33   10.3   0.0     3    23   355   375   353   384 0.88 AAA-like domain
T2SE                 PF00437.15   272 sp|O05519|YDIF_BACSU -            642   1.8e-05   23.7   0.5   1   2   0.00024     0.074   11.9   0.1   115   160    16    61     2    97 0.87 Type II/IV secretion system protein
T2SE                 PF00437.15   272 sp|O05519|YDIF_BACSU -            642   1.8e-05   23.7   0.5   2   2    0.0011      0.34    9.7   0.0    70   158   289   383   227   386 0.71 Type II/IV secretion system protein
AAA_14               PF13173.1    128 sp|O05519|YDIF_BACSU -            642   3.7e-05   23.6   0.7   2   2    0.0003     0.093   12.6   0.0     5    28   356   388   352   426 0.71 AAA domain
FtsK_SpoIIIE         PF01580.13   205 sp|O05519|YDIF_BACSU -            642   4.4e-05   23.0   0.4   1   2   4.3e-05     0.013   14.9   0.3    21   127    12   113     4   319 0.82 FtsK/SpoIIIE family
AAA_30               PF13604.1    196 sp|O05519|YDIF_BACSU -            642   0.00011   21.9   0.1   1   2   0.00088      0.27   10.7   0.0    16    50    28    61    22   111 0.82 AAA domain
Miro                 PF08477.8    119 sp|O05519|YDIF_BACSU -            642   0.00016   22.1   5.0   1   2   0.00021     0.064   13.7   0.0     1    40    31    77    31   129 0.64 Miro-like protein
AAA                  PF00004.24   132 sp|O05519|YDIF_BACSU -            642   0.00017   21.8   0.3   2   2    0.0022      0.69   10.1   0.0     3    31   358   386   356   430 0.70 ATPase family associated with various cellular activities (AAA)
NTPase_1             PF03266.10   168 sp|O05519|YDIF_BACSU -            642    0.0002   21.1   0.5   2   2    0.0013       0.4   10.3   0.1     4    27   358   381   355   387 0.86 NTPase
NB-ARC               PF00931.17   287 sp|O05519|YDIF_BACSU -            642   0.00021   20.2   0.0   1   2   0.00086      0.27   10.0   0.0    11    40    21    50    15    58 0.79 NB-ARC domain
AAA_17               PF13207.1    121 sp|O05519|YDIF_BACSU -            642   0.00039   21.2  13.0   1   2   1.6e-05    0.0049   17.6   0.4     1    46    31    77    31   160 0.61 AAA domain
AAA_33               PF13671.1    143 sp|O05519|YDIF_BACSU -            642   0.00068   19.5   3.3   2   2   0.00096       0.3   10.9   0.0     4    56   358   413   356   425 0.72 AAA domain
Zeta_toxin           PF06414.7    201 sp|O05519|YDIF_BACSU -            642   0.00091   18.3   0.2   1   2   0.00038      0.12   11.4   0.0     5    43    19    58    15    81 0.80 Zeta toxin
PduV-EutP            PF10662.4    143 sp|O05519|YDIF_BACSU -            642    0.0061   16.0   0.2   1   2   0.00053      0.16   11.4   0.1     3    38    31    65    29    85 0.88 Ethanolamine utilisation - propanediol utilisation
AAA_24               PF13479.1    213 sp|O05519|YDIF_BACSU -            642    0.0066   16.0   5.8   2   2   0.00034      0.11   12.1   0.0     6    27   356   377   351   485 0.85 AAA domain
MutS_V               PF00488.16   235 sp|O05519|YDIF_BACSU -            642    0.0077   15.6   0.1   1   2    0.0021      0.66    9.3   0.0    30    64    16    50     6    53 0.88 MutS domain V
Arch_ATPase          PF01637.13   234 sp|O05519|YDIF_BACSU -            642     0.018   14.7  13.8   2   2   0.00018     0.057   13.1   0.0    25    82   358   412   343   491 0.63 Archaeal ATPase
ArgK                 PF03308.11   267 sp|O05519|YDIF_BACSU -            642     0.027   13.2   7.8   1   2   0.00042      0.13   11.0   0.0    14    54    14    54     2    62 0.83 ArgK protein
Dynamin_N            PF00350.18   168 sp|O05519|YDIF_BACSU -            642     0.048   13.4   0.0   1   2   0.00016     0.048   13.4   0.0     1    92    32   121    32   219 0.80 Dynamin family
AAA_18               PF13238.1    129 sp|O05519|YDIF_BACSU -            642     0.096   12.9   0.1   1   2   0.00031     0.096   12.9   0.1     1    39    32    70    32   136 0.68 AAA domain
AAA_15               PF13175.1    415 sp|O05519|YDIF_BACSU -            642      0.19   10.7  31.0   1   4   0.00018     0.055   12.5   0.5    25    57    32    78    11   109 0.64 AAA ATPase domain
DUF87                PF01935.12   229 sp|O05519|YDIF_BACSU -            642      0.23   11.2   0.0   1   2   0.00074      0.23   11.2   0.0    24    53    30    58    20    61 0.81 Domain of unknown function DUF87
Abi                  PF02517.11    92 sp|O05525|YDIL_BACSU -            244   2.2e-17   62.9   7.3   1   1   4.4e-21   2.2e-17   62.9   7.3     5    91   129   214   125   215 0.93 CAAX protease self-immunity
YbjM                 PF11045.3    125 sp|O05525|YDIL_BACSU -            244     0.065   13.0   2.8   1   2   0.00012      0.59    9.9   0.2     1    57    41    98    41   103 0.86 Putative inner membrane protein of Enterobacteriaceae
DNA_methylase        PF00145.12   335 sp|O34939|YDIO_BACSU -            427   8.9e-47  159.8   0.0   1   1   8.6e-51   1.3e-46  159.3   0.0     2   326    85   418    84   424 0.80 C-5 cytosine-specific DNA methylase
DNA_methylase        PF00145.12   335 sp|O34680|YDIP_BACSU -            389   1.7e-49  168.8   0.0   1   2   2.7e-46     4e-42  144.5   0.0     1   168     1   170     1   202 0.91 C-5 cytosine-specific DNA methylase
DNA_methylase        PF00145.12   335 sp|O34680|YDIP_BACSU -            389   1.7e-49  168.8   0.0   2   2   3.7e-09   5.5e-05   22.4   0.0   289   334   241   293   234   294 0.91 C-5 cytosine-specific DNA methylase
PfkB                 PF00294.19   301 sp|O34768|YDJE_BACSU -            320     2e-81  273.4   0.4   1   1     3e-85   2.2e-81  273.2   0.4     2   300     4   312     3   313 0.98 pfkB family carbohydrate kinase
TPM                  PF04536.9    119 sp|O35004|YDJH_BACSU -            254   7.8e-12   45.1   0.0   1   1   7.7e-16   1.1e-11   44.5   0.0     1   113    42   149    42   153 0.97 TLP18.3, Psb32 and MOLO-1 founding proteins of phosphatase
Abhydrolase_6        PF12697.2    228 sp|O34592|YDJP_BACSU -            271     7e-39  134.0   0.0   1   1   4.3e-42   8.1e-39  133.8   0.0     1   226    23   257    23   259 0.84 Alpha/beta hydrolase family
Abhydrolase_1        PF00561.15   230 sp|O34592|YDJP_BACSU -            271   1.6e-25   90.0   0.3   1   1   5.7e-28   1.1e-24   87.3   0.3     1   228    47   260    47   262 0.91 alpha/beta hydrolase fold
Abhydrolase_5        PF12695.2    145 sp|O34592|YDJP_BACSU -            271     2e-16   60.0   0.0   1   1   7.5e-19   1.4e-15   57.3   0.0     1   145    22   247    22   247 0.86 Alpha/beta hydrolase family
Ndr                  PF03096.9    283 sp|O34592|YDJP_BACSU -            271   9.5e-07   27.5   0.0   1   1   6.7e-10   1.2e-06   27.1   0.0    47   279    38   267    28   269 0.84 Ndr family
Hydrolase_4          PF12146.3     79 sp|O34592|YDJP_BACSU -            271   2.3e-05   24.1   0.3   1   1   2.3e-08   4.2e-05   23.3   0.3    17    78    21    80     9    81 0.79 Putative lysophospholipase
Thioesterase         PF00975.15   229 sp|O34592|YDJP_BACSU -            271     0.085   13.0   0.0   1   1   5.7e-05      0.11   12.7   0.0    16   114    36   132    22   262 0.64 Thioesterase domain
Phage_int_SAM_1      PF02899.12    84 sp|O34592|YDJP_BACSU -            271       0.1   12.7   0.0   1   1   0.00011      0.21   11.7   0.0    11    35    61    85    57   114 0.87 Phage integrase, N-terminal SAM-like domain
EamA                 PF00892.15   126 sp|O31493|YDZE_BACSU -             78   6.4e-15   55.3  10.0   1   1   1.4e-18   6.9e-15   55.2  10.0    58   125     2    69     1    70 0.98 EamA-like transporter family
EmrE                 PF13536.1    113 sp|O31493|YDZE_BACSU -             78   2.2e-07   31.0   2.9   1   1   4.9e-11   2.4e-07   30.9   2.9    41   104     4    68     1    75 0.84 Multidrug resistance efflux transporter
CD20                 PF04103.10   150 sp|O31493|YDZE_BACSU -             78    0.0098   15.8   1.6   1   1   3.3e-06     0.016   15.0   1.6    32    55    51    74     1    78 0.86 CD20-like family
gerPA                PF10676.4     73 sp|C0H3W2|YDZR_BACSU -             76   9.1e-13   47.8   4.1   1   1     7e-17     1e-12   47.6   4.1     7    61     5    58     1    66 0.90 Spore germination protein gerPA/gerPF
Cation_efflux        PF01545.16   285 sp|P46348|YEAB_BACSU -            290     5e-64  216.1   6.8   1   1   2.2e-67   5.5e-64  215.9   6.8     2   282    15   288    14   290 0.95 Cation efflux family
RseC_MucC            PF04246.7    135 sp|P46348|YEAB_BACSU -            290      0.24   10.9   5.5   2   3   8.7e-05      0.21   11.1   1.0    79   129    85   147    80   153 0.67 Positive regulator of sigma(E), RseC/MucC
SPC12                PF06645.8     77 sp|P46348|YEAB_BACSU -            290      0.85    9.4   0.0   2   2   0.00034      0.85    9.4   0.0    20    61   160   201   144   205 0.88 Microsomal signal peptidase 12 kDa subunit (SPC12)
AAA_3                PF07726.6    131 sp|P94474|YEAC_BACSU -            320     5e-66  220.2   0.0   1   1   4.9e-69     8e-66  219.5   0.0     1   131    41   171    41   171 0.99 ATPase family associated with various cellular activities (AAA)
AAA_5                PF07728.9    139 sp|P94474|YEAC_BACSU -            320   2.6e-14   53.1   0.0   1   1   2.5e-17   4.1e-14   52.4   0.0     1   139    41   169    41   169 0.91 AAA domain (dynein-related subfamily)
MCM                  PF00493.18   331 sp|P94474|YEAC_BACSU -            320     5e-08   32.1   0.0   1   2   4.6e-08   7.5e-05   21.6   0.0    57   175    39   154    23   169 0.80 MCM2/3/5 family
MCM                  PF00493.18   331 sp|P94474|YEAC_BACSU -            320     5e-08   32.1   0.0   2   2    0.0006      0.99    8.1   0.0   250   320   208   275   185   282 0.70 MCM2/3/5 family
AAA                  PF00004.24   132 sp|P94474|YEAC_BACSU -            320   5.7e-07   29.7   0.0   1   1     6e-10   9.9e-07   29.0   0.0     2   112    43   152    42   177 0.77 ATPase family associated with various cellular activities (AAA)
RuvB_N               PF05496.7    234 sp|P94474|YEAC_BACSU -            320   0.00013   21.0   0.0   1   1   4.1e-07   0.00068   18.7   0.0    50   130    39   131    25   177 0.80 Holliday junction DNA helicase ruvB N-terminus
Sigma54_activat      PF00158.21   168 sp|P94474|YEAC_BACSU -            320   0.00034   20.1   0.1   1   1   1.8e-06     0.003   17.0   0.1    23   145    40   153    24   159 0.67 Sigma-54 interaction domain
AAA_2                PF07724.9    171 sp|P94474|YEAC_BACSU -            320   0.00067   19.6   0.0   1   1   8.5e-07    0.0014   18.5   0.0     3   128    39   150    37   159 0.84 AAA domain (Cdc48 subfamily)
AAA_22               PF13401.1    131 sp|P94474|YEAC_BACSU -            320    0.0011   19.1   0.0   1   2   0.00039      0.64   10.1   0.0     4    28    39    63    35   128 0.79 AAA domain
Mg_chelatase         PF01078.16   207 sp|P94474|YEAC_BACSU -            320    0.0042   16.2   0.1   1   2   0.00038      0.62    9.1   0.1    20    44    37    61    18    73 0.77 Magnesium chelatase, subunit ChlI
DUF2179              PF10035.4     55 sp|O34624|YEBE_BACSU -            184   5.1e-11   42.0   0.0   1   1   1.2e-14   9.2e-11   41.1   0.0     1    55   118   170   118   170 0.99 Uncharacterized protein conserved in bacteria (DUF2179)
SSrecog              PF03531.9    222 sp|O34624|YEBE_BACSU -            184      0.13   11.5   0.1   1   1   2.7e-05       0.2   10.9   0.1   141   180   134   172   131   182 0.82 Structure-specific recognition protein (SSRP1)
AA_permease_2        PF13520.1    426 sp|O34560|YECA_BACSU -            424     4e-35  121.1  48.9   1   1   1.7e-38     5e-35  120.8  48.9     1   407     9   400     9   412 0.83 Amino acid permease
AA_permease          PF00324.16   478 sp|O34560|YECA_BACSU -            424   5.9e-28   97.4  42.5   1   1   2.7e-31   8.1e-28   96.9  42.5     5   438    17   414    14   421 0.82 Amino acid permease
Spore_permease       PF03845.8    320 sp|O34560|YECA_BACSU -            424   5.3e-09   35.1  17.0   1   2   1.8e-12   5.3e-09   35.1  17.0     2   234     9   245     8   252 0.84 Spore germination protein
Aa_trans             PF01490.13   409 sp|O34560|YECA_BACSU -            424       2.9    6.2  37.7   1   2   4.6e-06     0.014   13.9  23.6     2   255     8   248     7   286 0.72 Transmembrane amino acid transporter protein
DEAD                 PF00270.24   169 sp|O34469|YEEB_BACSU -            599   7.6e-07   28.7   0.0   1   1   6.4e-10   1.9e-06   27.4   0.0     2   159    25   186    24   191 0.78 DEAD/DEAH box helicase
ResIII               PF04851.10   184 sp|O34469|YEEB_BACSU -            599   0.00014   21.7   0.5   1   1   1.1e-07   0.00032   20.6   0.0    11   180    30   187     4   191 0.77 Type III restriction enzyme, res subunit
Helicase_C           PF00271.26    78 sp|O34469|YEEB_BACSU -            599   0.00048   19.9   0.1   1   1   7.4e-07    0.0022   17.8   0.0    22    77   314   373   295   374 0.86 Helicase conserved C-terminal domain
PAS_6                PF08348.6    118 sp|O34469|YEEB_BACSU -            599     0.041   13.4   0.1   2   2   0.00031      0.91    9.0   0.1    27    83   245   303   236   317 0.91 YheO-like PAS domain
DDE_Tnp_1_assoc      PF13808.1     90 sp|O34469|YEEB_BACSU -            599     0.074   12.7   0.0   1   1   6.1e-05      0.18   11.4   0.0    53    86   113   151   106   153 0.78 DDE_Tnp_1-associated
Transcrip_reg        PF01709.15   234 sp|O31509|YEEI_BACSU -            239   1.4e-85  286.1   4.3   1   1     1e-89   1.5e-85  286.0   4.3     1   234     3   236     3   236 0.98 Transcriptional regulator
Resolvase            PF00239.16   141 sp|O35034|YEFC_BACSU -            111     3e-06   27.1   0.1   1   2   1.7e-09   6.2e-06   26.1   0.0   106   138    23    55     9    57 0.88 Resolvase, N terminal domain
HTH_7                PF02796.10    45 sp|O35034|YEFC_BACSU -            111   9.4e-05   22.1   0.6   1   1   4.8e-08   0.00018   21.2   0.1     1    44    61   103    61   104 0.94 Helix-turn-helix domain of resolvase
Trp_repressor        PF01371.14    88 sp|O35034|YEFC_BACSU -            111    0.0033   17.3   0.3   2   2   3.9e-06     0.014   15.2   0.1    46    71    77   102    67   108 0.86 Trp repressor protein
HTH_23               PF13384.1     50 sp|O35034|YEFC_BACSU -            111     0.016   14.8   0.0   1   1   6.6e-06     0.025   14.2   0.0     9    42    70   104    62   111 0.74 Homeodomain-like domain
Adenine_deam_C       PF13382.1    171 sp|O34909|YERA_BACSU -            580   2.6e-35  121.0   0.0   1   1     1e-38   3.8e-35  120.5   0.0    13   170   418   572   408   573 0.93 Adenine deaminase C-terminal domain
Amidohydro_1         PF01979.15   333 sp|O34909|YERA_BACSU -            580   1.7e-27   96.9   0.0   1   1   3.2e-30   1.2e-26   94.2   0.0     1   333    78   345    78   345 0.95 Amidohydrolase family
Amidohydro_4         PF13147.1    304 sp|O34909|YERA_BACSU -            580   1.2e-10   41.9   0.0   1   2   2.7e-09     1e-05   25.7   0.0     1   174    73   254    73   263 0.76 Amidohydrolase
Amidohydro_4         PF13147.1    304 sp|O34909|YERA_BACSU -            580   1.2e-10   41.9   0.0   2   2   1.2e-05     0.044   13.8   0.0   228   303   263   341   252   341 0.90 Amidohydrolase
Amidohydro_5         PF13594.1     68 sp|O34909|YERA_BACSU -            580   7.8e-10   38.4   0.0   1   1   4.7e-13   1.7e-09   37.3   0.0     1    68    48   111    48   111 0.75 Amidohydrolase
Glu_synthase         PF01645.12   368 sp|O34849|YERD_BACSU -            525  8.5e-130  432.9   0.0   1   1  2.2e-133  1.1e-129  432.5   0.0     2   368   116   494   115   494 0.98 Conserved region in glutamate synthase
FMN_dh               PF01070.13   357 sp|O34849|YERD_BACSU -            525    0.0005   19.0   0.0   2   2   1.4e-06    0.0071   15.2   0.1   278   316   393   436   374   447 0.79 FMN-dependent dehydrogenase
IMPDH                PF00478.20   352 sp|O34849|YERD_BACSU -            525     0.042   12.7   0.0   1   1   1.6e-05     0.078   11.8   0.0   191   239   376   428   372   437 0.86 IMP dehydrogenase / GMP reductase domain
APH                  PF01636.18   239 sp|O34640|YERI_BACSU -            336   3.4e-23   82.6   0.0   1   1   3.1e-27   4.6e-23   82.1   0.0     3   228    33   258    31   277 0.78 Phosphotransferase enzyme family
SnoaL_2              PF12680.2    102 sp|O31511|YESE_BACSU -            147     7e-13   48.8   0.0   1   1     4e-16   8.4e-13   48.6   0.0     2   102    14   122    13   122 0.89 SnoaL-like domain
LEH                  PF07858.7    125 sp|O31511|YESE_BACSU -            147     4e-05   23.6   0.0   1   1   2.3e-08   4.9e-05   23.3   0.0     3   115     9   127     7   135 0.80 Limonene-1,2-epoxide hydrolase catalytic domain
PHZA_PHZB            PF03284.8    162 sp|O31511|YESE_BACSU -            147   0.00015   20.8   0.0   1   1   8.7e-08   0.00018   20.6   0.0    22   143    11   130     3   141 0.85 Phenazine biosynthesis protein A/B
SnoaL_4              PF13577.1    127 sp|O31511|YESE_BACSU -            147   0.00047   20.0   0.0   1   1   2.5e-07   0.00054   19.8   0.0    12    73    12    75     6   126 0.79 SnoaL-like domain
SnoaL                PF07366.7    126 sp|O31511|YESE_BACSU -            147    0.0029   17.1   0.0   1   1   2.6e-06    0.0055   16.2   0.0     5   119    15   128    11   133 0.78 SnoaL-like polyketide cyclase
DUF4440              PF14534.1    107 sp|O31511|YESE_BACSU -            147     0.011   15.9   0.0   1   1   6.7e-06     0.014   15.5   0.0     4   103    12   117    10   120 0.72 Domain of unknown function (DUF4440)
SnoaL_3              PF13474.1    121 sp|O31511|YESE_BACSU -            147      0.06   13.3   0.0   1   1   4.1e-05     0.087   12.8   0.0     4    83    12    97    10   128 0.75 SnoaL-like domain
NAD_binding_10       PF13460.1    183 sp|O31512|YESF_BACSU -            286   8.9e-19   68.1   0.1   1   1   1.2e-20   1.4e-17   64.3   0.0     1   181     7   177     7   179 0.85 NADH(P)-binding
NmrA                 PF05368.8    233 sp|O31512|YESF_BACSU -            286   1.5e-11   44.0   0.1   1   2   1.2e-06    0.0013   17.9   0.2     1    32     7    38     7    59 0.89 NmrA-like family
NmrA                 PF05368.8    233 sp|O31512|YESF_BACSU -            286   1.5e-11   44.0   0.1   2   2   2.2e-08   2.5e-05   23.6   0.0   137   231   125   214   115   216 0.81 NmrA-like family
Epimerase            PF01370.16   236 sp|O31512|YESF_BACSU -            286   1.2e-05   24.8   0.0   1   2   2.4e-07   0.00028   20.4   0.0     1    39     7    43     7    74 0.75 NAD dependent epimerase/dehydratase family
adh_short            PF00106.20   167 sp|O31512|YESF_BACSU -            286   0.00041   20.3   0.7   1   1   1.5e-06    0.0017   18.3   0.0     3    37     7    38     5    52 0.81 short chain dehydrogenase
F420_oxidored        PF03807.12    96 sp|O31512|YESF_BACSU -            286    0.0031   17.9   0.1   1   2   4.6e-05     0.052   13.9   0.0     6    42    12    44     7    73 0.86 NADP oxidoreductase coenzyme F420-dependent
CoA_binding_2        PF13380.1    116 sp|O31512|YESF_BACSU -            286    0.0038   17.3   0.0   1   1   8.4e-06    0.0096   16.0   0.0    14    89    15   103     7   125 0.70 CoA binding domain
RmlD_sub_bind        PF04321.12   287 sp|O31512|YESF_BACSU -            286    0.0087   14.9   0.0   1   2   0.00013      0.15   10.9   0.0     3    43     7    47     4    54 0.93 RmlD substrate binding domain
3HCDH_N              PF02737.13   180 sp|O31512|YESF_BACSU -            286     0.016   14.8   0.0   1   1   5.8e-05     0.066   12.8   0.0     6    39    12    45     8    65 0.91 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain
ELFV_dehydrog        PF00208.16   244 sp|O31512|YESF_BACSU -            286     0.019   14.5   0.0   1   2   6.7e-05     0.076   12.5   0.0    36    73     9    46     2    67 0.89 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase
KR                   PF08659.5    181 sp|O31512|YESF_BACSU -            286     0.033   13.8   0.6   1   2    0.0001      0.12   12.0   0.1     4    39     8    42     6   108 0.80 KR domain
Polysacc_synt_2      PF02719.10   294 sp|O31512|YESF_BACSU -            286     0.074   11.9   0.0   1   1    0.0001      0.12   11.2   0.0     1    38     7    43     7    71 0.77 Polysaccharide biosynthesis protein
3Beta_HSD            PF01073.14   280 sp|O31512|YESF_BACSU -            286     0.086   11.5   0.0   1   1   0.00012      0.14   10.8   0.0     1    35     8    40     8    56 0.84 3-beta hydroxysteroid dehydrogenase/isomerase family
2-Hacid_dh_C         PF02826.14   178 sp|O31512|YESF_BACSU -            286     0.097   11.8   0.0   1   1   0.00016      0.18   10.9   0.0    43   100    12    72     3    74 0.72 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain
Acetyltransf_1       PF00583.19    83 sp|O31513|YESJ_BACSU -            180   2.7e-12   46.5   0.0   1   1   1.2e-15   4.6e-12   45.7   0.0     2    83    72   161    71   161 0.92 Acetyltransferase (GNAT) family
Acetyltransf_7       PF13508.1     79 sp|O31513|YESJ_BACSU -            180   4.5e-10   39.5   0.0   1   1   2.3e-13   8.4e-10   38.6   0.0     2    78    65   161    64   162 0.83 Acetyltransferase (GNAT) domain
Acetyltransf_10      PF13673.1    117 sp|O31513|YESJ_BACSU -            180   6.4e-06   26.2   0.1   1   1   3.2e-09   1.2e-05   25.4   0.1    26   117    45   160    24   160 0.67 Acetyltransferase (GNAT) domain
Acetyltransf_8       PF13523.1    152 sp|O31513|YESJ_BACSU -            180    0.0015   18.4   0.0   1   1   5.2e-07    0.0019   18.0   0.0    50   140    68   164    32   165 0.72 Acetyltransferase (GNAT) domain
SBP_bac_1            PF01547.20   315 sp|O31518|YESO_BACSU -            427   4.2e-25   89.1  10.5   1   1   1.9e-28   9.3e-25   88.0  10.5    11   313    50   333    39   335 0.80 Bacterial extracellular solute-binding protein
SBP_bac_8            PF13416.1    281 sp|O31518|YESO_BACSU -            427   3.7e-24   85.9   5.2   1   1   1.2e-27   5.8e-24   85.2   5.2     1   270    51   355    51   365 0.72 Bacterial extracellular solute-binding protein
SBP_bac_6            PF13343.1    242 sp|O31518|YESO_BACSU -            427   0.00011   21.6   1.3   2   2   1.5e-06    0.0074   15.6   0.1   179   227   310   360   305   369 0.78 Bacterial extracellular solute-binding protein
BPD_transp_1         PF00528.17   185 sp|O31519|YESP_BACSU -            309   1.9e-12   47.0  25.0   3   3   2.6e-16   1.9e-12   47.0  25.0     4   175    97   294    94   304 0.70 Binding-protein-dependent transport system inner membrane component
BCD                  PF15461.1    259 sp|O31519|YESP_BACSU -            309      0.27   10.6  20.0   2   2   2.4e-06     0.018   14.4  10.1    48   176   158   300   145   307 0.66 Beta-carotene 15,15'-dioxygenase
BPD_transp_1         PF00528.17   185 sp|O31520|YESQ_BACSU -            296   4.6e-21   75.1   9.7   2   2   3.1e-25   4.6e-21   75.1   9.7     9   183   113   290   101   292 0.85 Binding-protein-dependent transport system inner membrane component
FG-GAP               PF01839.18    34 sp|O31526|YESW_BACSU -            620   3.3e-11   42.5  17.3   1   4   1.6e-06    0.0048   16.5   1.4     3    22   152   173   150   189 0.75 FG-GAP repeat
FG-GAP               PF01839.18    34 sp|O31526|YESW_BACSU -            620   3.3e-11   42.5  17.3   2   4   5.6e-05      0.17   11.6   0.4     6    22   219   237   215   261 0.73 FG-GAP repeat
FG-GAP               PF01839.18    34 sp|O31526|YESW_BACSU -            620   3.3e-11   42.5  17.3   3   4   2.2e-06    0.0064   16.1   3.5     3    22   363   389   361   404 0.72 FG-GAP repeat
VCBS                 PF13517.1     61 sp|O31526|YESW_BACSU -            620   5.2e-10   39.5   5.4   1   3   0.00032      0.93    9.8   0.1    41    60   149   168   129   169 0.73 Repeat domain in Vibrio, Colwellia, Bradyrhizobium and Shewanella
VCBS                 PF13517.1     61 sp|O31526|YESW_BACSU -            620   5.2e-10   39.5   5.4   2   3   0.00023      0.67   10.3   0.3    36    60   208   232   176   233 0.73 Repeat domain in Vibrio, Colwellia, Bradyrhizobium and Shewanella
VCBS                 PF13517.1     61 sp|O31526|YESW_BACSU -            620   5.2e-10   39.5   5.4   3   3   9.2e-07    0.0027   18.0   0.1    20    60   332   379   313   380 0.76 Repeat domain in Vibrio, Colwellia, Bradyrhizobium and Shewanella
TcdB_toxin_midN      PF12256.3    175 sp|O31526|YESW_BACSU -            620    0.0012   18.3   4.6   3   3   0.00029      0.85    9.0   0.1    22    43   359   382   351   397 0.79 Insecticide toxin TcdB middle/N-terminal region
PQQ                  PF01011.16    38 sp|O31526|YESW_BACSU -            620     0.071   12.6   1.4   1   1   0.00014      0.43   10.2   0.0    15    29   433   447   428   455 0.85 PQQ enzyme repeat
FG-GAP               PF01839.18    34 sp|O31527|YESX_BACSU -            612   9.7e-13   47.4  13.4   1   4   1.3e-05     0.033   13.8   0.5     3    21   119   137   117   156 0.76 FG-GAP repeat
FG-GAP               PF01839.18    34 sp|O31527|YESX_BACSU -            612   9.7e-13   47.4  13.4   2   4   2.2e-05     0.054   13.2   0.1     6    32   186   212   182   214 0.73 FG-GAP repeat
FG-GAP               PF01839.18    34 sp|O31527|YESX_BACSU -            612   9.7e-13   47.4  13.4   3   4   8.8e-08   0.00022   20.8   3.5     2    29   329   356   328   372 0.77 FG-GAP repeat
VCBS                 PF13517.1     61 sp|O31527|YESX_BACSU -            612   1.4e-09   38.2   7.0   2   3   4.9e-05      0.12   12.7   0.2    26    60   163   199   144   200 0.74 Repeat domain in Vibrio, Colwellia, Bradyrhizobium and Shewanella
VCBS                 PF13517.1     61 sp|O31527|YESX_BACSU -            612   1.4e-09   38.2   7.0   3   3   9.1e-07    0.0022   18.2   0.0    24    60   304   346   282   347 0.64 Repeat domain in Vibrio, Colwellia, Bradyrhizobium and Shewanella
DUF421               PF04239.7     99 sp|O31533|YETF_BACSU -            231   7.9e-33  111.9   1.2   1   2   1.6e-28   2.3e-24   84.7   0.1     1    75    87   162    87   169 0.92 Protein of unknown function (DUF421)
DUF421               PF04239.7     99 sp|O31533|YETF_BACSU -            231   7.9e-33  111.9   1.2   2   2   2.6e-10   3.9e-06   26.3   0.1     8    50   170   212   167   217 0.95 Protein of unknown function (DUF421)
Bax1-I               PF01027.15   205 sp|O31539|YETJ_BACSU -            214   8.5e-35  120.2  33.7   1   1   1.4e-38     1e-34  119.9  33.7     3   205    12   207    10   207 0.81 Inhibitor of apoptosis-promoting Bax1
CcoS                 PF03597.10    45 sp|O31539|YETJ_BACSU -            214      0.16   11.4   0.3   1   2   2.1e-05      0.16   11.4   0.3     4    23    40    59    39    63 0.92 Cytochrome oxidase maturation protein cbb3-type
EamA                 PF00892.15   126 sp|O31540|YETK_BACSU -            330   2.6e-43  147.0  41.7   1   2   1.7e-26   6.5e-23   81.1  13.0     2   125    39   162    38   163 0.94 EamA-like transporter family
EamA                 PF00892.15   126 sp|O31540|YETK_BACSU -            330   2.6e-43  147.0  41.7   2   2   4.1e-24   1.5e-20   73.5  18.9     4   125   190   313   187   314 0.95 EamA-like transporter family
EmrE                 PF13536.1    113 sp|O31540|YETK_BACSU -            330   1.3e-12   47.9   7.1   2   3   3.5e-16   1.3e-12   47.9   7.1     3   111    62   168    60   170 0.85 Multidrug resistance efflux transporter
DUF914               PF06027.7    336 sp|O31540|YETK_BACSU -            330    0.0014   17.5  23.0   1   2     4e-06     0.015   14.1  15.4    18   251    27   263    12   277 0.66 Eukaryotic protein of unknown function (DUF914)
TPT                  PF03151.11   153 sp|O31540|YETK_BACSU -            330    0.0037   16.9  33.9   1   2   3.3e-05      0.12   11.9  12.3    41   149    62   159    16   162 0.77 Triose-phosphate Transporter family
TPT                  PF03151.11   153 sp|O31540|YETK_BACSU -            330    0.0037   16.9  33.9   2   2   0.00011      0.42   10.2  13.5    35   149   205   310   178   311 0.67 Triose-phosphate Transporter family
FecCD                PF01032.13   311 sp|O31569|YFHA_BACSU -            343   2.1e-91  306.0  36.3   1   1   5.3e-95   2.6e-91  305.6  36.3     2   311    25   339    24   339 0.99 FecCD transport family
ABC-3                PF00950.12   258 sp|O31569|YFHA_BACSU -            343   2.4e-05   23.7  17.7   2   2   4.9e-09   2.4e-05   23.7  17.7    57   253   136   335   121   340 0.78 ABC 3 transport family
PhzC-PhzF            PF02567.11   281 sp|O31570|YFHB_BACSU -            293   1.2e-89  300.3   0.0   1   1   2.7e-93   1.3e-89  300.1   0.0     1   279     9   287     9   289 0.97 Phenazine biosynthesis-like protein
DAP_epimerase        PF01678.14   121 sp|O31570|YFHB_BACSU -            293   2.5e-06   27.3   0.2   1   2   9.1e-08   0.00045   20.1   0.0    43   111    48   116    16   127 0.87 Diaminopimelate epimerase
Pro_racemase         PF05544.6    325 sp|O31570|YFHB_BACSU -            293    0.0004   19.3   0.0   1   2   1.8e-07   0.00088   18.1   0.0    64   130    54   117    46   130 0.87 Proline racemase
Nitroreductase       PF00881.19   165 sp|O31571|YFHC_BACSU -            194   4.3e-27   94.9   0.0   1   1   3.4e-31     5e-27   94.7   0.0     1   165    17   174    17   174 0.90 Nitroreductase family
Epimerase            PF01370.16   236 sp|O31574|YFHF_BACSU -            303   1.5e-17   63.7   0.0   1   1   1.7e-20   2.3e-17   63.2   0.0     1   234     3   222     3   224 0.84 NAD dependent epimerase/dehydratase family
DUF1731              PF08338.6     48 sp|O31574|YFHF_BACSU -            303     4e-16   58.2   0.2   1   1     6e-19   8.1e-16   57.2   0.2     1    47   250   296   250   297 0.98 Domain of unknown function (DUF1731)
NAD_binding_10       PF13460.1    183 sp|O31574|YFHF_BACSU -            303   2.4e-12   47.2   0.0   1   1   2.2e-15   2.9e-12   46.9   0.0     1   182     3   213     3   214 0.78 NADH(P)-binding
NAD_binding_4        PF07993.7    249 sp|O31574|YFHF_BACSU -            303   5.2e-06   25.5   1.0   1   2     3e-07    0.0004   19.3   0.2     2    38     6    40     5    63 0.83 Male sterility protein
NmrA                 PF05368.8    233 sp|O31574|YFHF_BACSU -            303   3.1e-05   23.3   0.1   1   1   5.4e-08   7.3e-05   22.1   0.1     1    38     3    40     3    52 0.88 NmrA-like family
adh_short            PF00106.20   167 sp|O31574|YFHF_BACSU -            303   0.00029   20.8   0.2   1   2   8.8e-06     0.012   15.5   0.1     5    51     5    51     2    56 0.73 short chain dehydrogenase
RmlD_sub_bind        PF04321.12   287 sp|O31574|YFHF_BACSU -            303   0.00058   18.8   0.0   1   1   5.8e-07   0.00079   18.4   0.0     1   156     1   172     1   246 0.72 RmlD substrate binding domain
KR                   PF08659.5    181 sp|O31574|YFHF_BACSU -            303     0.009   15.6   1.7   1   3   7.4e-05       0.1   12.2   0.1     5    43     5    42     3    63 0.76 KR domain
NAD_binding_2        PF03446.10   163 sp|O31574|YFHF_BACSU -            303     0.046   13.5   0.1   1   1   6.1e-05     0.083   12.7   0.1     4    47     3    47     1   123 0.87 NAD binding domain of 6-phosphogluconate dehydrogenase
3Beta_HSD            PF01073.14   280 sp|O31574|YFHF_BACSU -            303     0.057   12.1   0.1   1   1     7e-05     0.095   11.3   0.1     2    41     5    42     4   130 0.77 3-beta hydroxysteroid dehydrogenase/isomerase family
F420_oxidored        PF03807.12    96 sp|O31574|YFHF_BACSU -            303      0.07   13.5   0.1   1   1   0.00017      0.23   11.8   0.1     2    43     3    41     2   115 0.81 NADP oxidoreductase coenzyme F420-dependent
MFS_1                PF07690.11   352 sp|O31577|YFHI_BACSU -            397   2.6e-34  118.5  62.2   1   2   8.5e-38   6.3e-34  117.2  48.9     1   337    15   331    15   338 0.81 Major Facilitator Superfamily
Sugar_tr             PF00083.19   451 sp|O31577|YFHI_BACSU -            397   2.1e-08   33.2  17.9   1   2   2.8e-12   2.1e-08   33.2  17.9     3   190    13   183    11   187 0.86 Sugar (and other) transporter
Abhydrolase_6        PF12697.2    228 sp|O31581|YFHM_BACSU -            286   1.2e-35  123.4   0.0   1   1   5.7e-39   1.4e-35  123.2   0.0     1   227    29   277    29   278 0.73 Alpha/beta hydrolase family
Abhydrolase_1        PF00561.15   230 sp|O31581|YFHM_BACSU -            286   6.1e-22   78.3   0.0   1   1   5.4e-25   1.3e-21   77.1   0.0     1   228    54   279    54   281 0.78 alpha/beta hydrolase fold
Abhydrolase_5        PF12695.2    145 sp|O31581|YFHM_BACSU -            286   5.4e-17   61.8   0.0   1   1   6.1e-20   1.5e-16   60.4   0.0     1   144    28   265    28   266 0.71 Alpha/beta hydrolase family
Hydrolase_4          PF12146.3     79 sp|O31581|YFHM_BACSU -            286   2.1e-05   24.2   0.0   1   1   1.7e-08   4.3e-05   23.2   0.0    17    76    27    87    13    90 0.83 Putative lysophospholipase
DLH                  PF01738.13   218 sp|O31581|YFHM_BACSU -            286    0.0014   17.9   0.0   1   2   7.7e-06     0.019   14.2   0.0    13   120    25   117    15   125 0.78 Dienelactone hydrolase family
PGAP1                PF07819.8    225 sp|O31581|YFHM_BACSU -            286     0.097   12.2   0.0   1   1   6.3e-05      0.16   11.5   0.0    76   123    88   130    75   139 0.70 PGAP1-like protein
NUDIX_4              PF14815.1    114 sp|O31584|YFHQ_BACSU -            369   8.7e-31  105.6   0.7   2   2   6.6e-34     2e-30  104.5   0.2     2   114   245   357   244   357 0.93 NUDIX domain
HhH-GPD              PF00730.20   108 sp|O31584|YFHQ_BACSU -            369   3.2e-22   78.8   0.0   1   1   3.8e-25   1.1e-21   77.0   0.0     1   103    44   174    44   179 0.96 HhH-GPD superfamily base excision DNA repair protein
HHH                  PF00633.18    30 sp|O31584|YFHQ_BACSU -            369   3.3e-05   23.3   0.3   1   1     6e-08   0.00018   21.0   0.1     2    30   109   137   108   137 0.95 Helix-hairpin-helix motif
HHH_5                PF14520.1     60 sp|O31584|YFHQ_BACSU -            369    0.0011   19.0   0.2   1   2   2.8e-06    0.0082   16.3   0.0    20    58    63   102    61   104 0.76 Helix-hairpin-helix domain
EndIII_4Fe-2S        PF10576.4     17 sp|O31584|YFHQ_BACSU -            369    0.0012   18.9   5.6   1   1   6.8e-07     0.002   18.2   5.6     1    17   201   217   201   217 0.99 Iron-sulfur binding domain of endonuclease III
ABC_tran             PF00005.22   137 sp|P54718|YFIB_BACSU -            573   4.8e-36  124.0   0.0   1   1   8.6e-39   8.5e-36  123.2   0.0     1   137   347   496   347   496 0.88 ABC transporter
ABC_membrane         PF00664.18   275 sp|P54718|YFIB_BACSU -            573   6.1e-36  124.2  21.3   1   1   8.7e-39   8.6e-36  123.7  21.3     4   274    18   285    14   286 0.91 ABC transporter transmembrane region
SMC_N                PF02463.14   220 sp|P54718|YFIB_BACSU -            573   2.2e-05   23.8   0.6   2   2   3.2e-06    0.0032   16.7   0.1   115   209   429   534   379   540 0.82 RecF/RecN/SMC N terminal domain
AAA_16               PF13191.1    185 sp|P54718|YFIB_BACSU -            573   0.00031   20.7   0.1   1   1   5.6e-07   0.00055   19.9   0.1    16   163   347   498   341   520 0.53 AAA ATPase domain
AAA_21               PF13304.1    303 sp|P54718|YFIB_BACSU -            573    0.0011   19.0   0.1   1   1   2.5e-05     0.025   14.5   0.1     3   270   361   498   359   521 0.65 AAA domain
ABC_ATPase           PF09818.4    448 sp|P54718|YFIB_BACSU -            573    0.0011   17.6   0.0   2   2   3.2e-05     0.032   12.8   0.1   301   364   445   509   439   533 0.84 Predicted ATPase of the ABC class
AAA_29               PF13555.1     62 sp|P54718|YFIB_BACSU -            573    0.0015   17.9   0.0   1   1   3.5e-06    0.0035   16.8   0.0    16    41   351   375   345   389 0.77 P-loop containing region of AAA domain
G-alpha              PF00503.15   389 sp|P54718|YFIB_BACSU -            573    0.0041   15.8   0.0   1   1   5.3e-06    0.0053   15.5   0.0    54    88   353   395   315   530 0.83 G-protein alpha subunit
DUF87                PF01935.12   229 sp|P54718|YFIB_BACSU -            573    0.0052   16.6   0.0   1   1   1.1e-05      0.01   15.6   0.0    26    43   360   377   356   391 0.82 Domain of unknown function DUF87
T2SE                 PF00437.15   272 sp|P54718|YFIB_BACSU -            573     0.013   14.4   0.0   1   1   2.8e-05     0.027   13.3   0.0   115   165   344   394   317   406 0.77 Type II/IV secretion system protein
AAA_23               PF13476.1    202 sp|P54718|YFIB_BACSU -            573     0.013   15.8   0.0   1   1   3.8e-05     0.037   14.3   0.0    16    39   351   377   336   379 0.81 AAA domain
AAA_14               PF13173.1    128 sp|P54718|YFIB_BACSU -            573     0.017   15.0   0.0   1   1   4.4e-05     0.043   13.7   0.0     3    85   358   452   356   471 0.65 AAA domain
FtsK_SpoIIIE         PF01580.13   205 sp|P54718|YFIB_BACSU -            573     0.029   13.8   0.0   1   1   5.4e-05     0.053   12.9   0.0    29    56   348   375   336   378 0.84 FtsK/SpoIIIE family
AAA_18               PF13238.1    129 sp|P54718|YFIB_BACSU -            573      0.07   13.4   0.0   1   1   0.00015      0.14   12.4   0.0     1    23   360   408   360   464 0.65 AAA domain
ABC_membrane         PF00664.18   275 sp|P54719|YFIC_BACSU -            604   2.3e-56  191.2  16.1   1   1   7.1e-59   3.6e-56  190.5  16.1     1   275    49   320    49   320 0.99 ABC transporter transmembrane region
ABC_tran             PF00005.22   137 sp|P54719|YFIC_BACSU -            604     1e-33  116.5   0.0   1   1   3.9e-36     2e-33  115.5   0.0     1   137   382   531   382   531 0.90 ABC transporter
AAA_16               PF13191.1    185 sp|P54719|YFIC_BACSU -            604   7.7e-06   26.0   0.2   1   1   6.1e-08   3.1e-05   24.0   0.0    13   178   382   553   374   562 0.61 AAA ATPase domain
AAA_21               PF13304.1    303 sp|P54719|YFIC_BACSU -            604   0.00014   21.9   0.0   1   1   1.1e-05    0.0054   16.7   0.0     2   283   395   550   394   565 0.73 AAA domain
AAA_17               PF13207.1    121 sp|P54719|YFIC_BACSU -            604   0.00022   22.0   0.0   1   1     1e-06   0.00053   20.8   0.0     2    24   395   421   394   553 0.69 AAA domain
ABC_membrane_3       PF13748.1    237 sp|P54719|YFIC_BACSU -            604   0.00028   19.9   8.9   1   2   8.1e-05     0.042   12.8   3.4    11    61    48    98    40   102 0.88 ABC transporter transmembrane region
ABC_membrane_3       PF13748.1    237 sp|P54719|YFIC_BACSU -            604   0.00028   19.9   8.9   2   2    0.0017      0.88    8.5   0.1   113   166   162   215   139   250 0.77 ABC transporter transmembrane region
SRP54                PF00448.17   196 sp|P54719|YFIC_BACSU -            604   0.00034   20.1   0.4   1   1   2.8e-06    0.0014   18.0   0.1     3    39   394   430   392   437 0.92 SRP54-type protein, GTPase domain
AAA_22               PF13401.1    131 sp|P54719|YFIC_BACSU -            604   0.00093   19.3   0.2   1   1   1.7e-05    0.0087   16.1   0.2     5   113   393   550   390   565 0.66 AAA domain
SMC_N                PF02463.14   220 sp|P54719|YFIC_BACSU -            604     0.002   17.3   0.6   2   2   3.9e-05      0.02   14.1   0.1   135   212   477   574   409   581 0.70 RecF/RecN/SMC N terminal domain
T2SE                 PF00437.15   272 sp|P54719|YFIC_BACSU -            604    0.0025   16.7   0.0   1   1   9.4e-06    0.0048   15.8   0.0   101   160   365   424   330   433 0.85 Type II/IV secretion system protein
DUF258               PF03193.11   161 sp|P54719|YFIC_BACSU -            604    0.0025   16.9   0.0   1   1     1e-05    0.0052   15.9   0.0    22    60   378   417   358   464 0.83 Protein of unknown function, DUF258
Zeta_toxin           PF06414.7    201 sp|P54719|YFIC_BACSU -            604     0.004   16.2   0.2   1   1   2.1e-05     0.011   14.8   0.0    19    57   395   434   387   470 0.91 Zeta toxin
AAA_30               PF13604.1    196 sp|P54719|YFIC_BACSU -            604    0.0049   16.4   0.0   1   1   3.8e-05     0.019   14.5   0.0    15   102   389   529   375   546 0.55 AAA domain
ABC_membrane_2       PF06472.10   282 sp|P54719|YFIC_BACSU -            604     0.005   15.9   7.2   1   1   3.4e-05     0.017   14.2   7.2    57   209    77   225    41   230 0.62 ABC transporter transmembrane region 2
AAA_18               PF13238.1    129 sp|P54719|YFIC_BACSU -            604    0.0055   17.0   0.0   1   1   3.2e-05     0.017   15.4   0.0     1    20   395   414   395   488 0.79 AAA domain
AAA_25               PF13481.1    194 sp|P54719|YFIC_BACSU -            604    0.0086   15.4   0.4   1   1   7.4e-05     0.038   13.3   0.3    30   157   389   535   364   555 0.59 AAA domain
AAA                  PF00004.24   132 sp|P54719|YFIC_BACSU -            604     0.009   16.2   0.7   1   1   0.00025      0.13   12.5   0.7     2    98   396   554   395   576 0.77 ATPase family associated with various cellular activities (AAA)
AAA_19               PF13245.1     76 sp|P54719|YFIC_BACSU -            604     0.013   15.2   0.1   1   1   7.2e-05     0.037   13.7   0.1    11    37   394   418   387   440 0.78 Part of AAA domain
IstB_IS21            PF01695.12   178 sp|P54719|YFIC_BACSU -            604     0.015   14.7   0.4   1   2   0.00033      0.17   11.2   0.0    33    65   377   410   353   415 0.77 IstB-like ATP binding protein
APS_kinase           PF01583.15   157 sp|P54719|YFIC_BACSU -            604     0.015   14.9   0.0   1   1   0.00027      0.14   11.8   0.0     3    55   393   448   391   453 0.79 Adenylylsulphate kinase
MobB                 PF03205.9    140 sp|P54719|YFIC_BACSU -            604      0.05   13.2   0.0   1   1    0.0003      0.15   11.7   0.0     3    23   395   415   393   426 0.87 Molybdopterin guanine dinucleotide synthesis protein B
AAA_33               PF13671.1    143 sp|P54719|YFIC_BACSU -            604     0.054   13.3   0.3   1   1   0.00037      0.19   11.6   0.2     2    33   395   456   395   532 0.50 AAA domain
AAA_28               PF13521.1    163 sp|P54719|YFIC_BACSU -            604     0.062   13.2   0.1   1   1   0.00032      0.17   11.8   0.0     2    21   395   414   394   487 0.88 AAA domain
AAA_10               PF12846.2    304 sp|P54719|YFIC_BACSU -            604     0.073   12.4   0.0   1   1   0.00044      0.22   10.9   0.0     3    34   394   425   392   438 0.84 AAA-like domain
AAA_29               PF13555.1     62 sp|P54719|YFIC_BACSU -            604     0.092   12.2   0.1   1   1   0.00044      0.23   11.0   0.1    16    39   386   408   380   413 0.81 P-loop containing region of AAA domain
Mg_chelatase         PF01078.16   207 sp|P54719|YFIC_BACSU -            604       0.1   11.7   0.0   1   1   0.00051      0.26   10.4   0.0     7    67   378   437   373   450 0.80 Magnesium chelatase, subunit ChlI
AAA_23               PF13476.1    202 sp|P54719|YFIC_BACSU -            604      0.51   10.6   3.1   1   1     0.001      0.53   10.5   0.4    20    35   393   408   364   412 0.78 AAA domain
Sugar_tr             PF00083.19   451 sp|P54723|YFIG_BACSU -            482  1.9e-110  369.5  28.8   1   1  7.3e-114  2.2e-110  369.3  28.8     2   449    25   461    24   463 0.95 Sugar (and other) transporter
MFS_1                PF07690.11   352 sp|P54723|YFIG_BACSU -            482   3.4e-36  124.6  58.9   1   2   6.4e-36   1.9e-32  112.3  31.7     3   342    30   404    29   405 0.80 Major Facilitator Superfamily
MFS_1                PF07690.11   352 sp|P54723|YFIG_BACSU -            482   3.4e-36  124.6  58.9   2   2   8.7e-10   2.6e-06   26.4  19.1    41   179   308   455   297   465 0.80 Major Facilitator Superfamily
MFS_2                PF13347.1    428 sp|P54723|YFIG_BACSU -            482   4.9e-09   35.0  19.9   1   1   1.7e-12   4.9e-09   35.0  19.9    33   343    56   389    48   393 0.75 MFS/sugar transport protein
TRI12                PF06609.8    599 sp|P54723|YFIG_BACSU -            482   0.00026   19.3   3.3   1   1   8.9e-08   0.00026   19.3   3.3    81   202    63   190    46   218 0.67 Fungal trichothecene efflux pump (TRI12)
MFS_1_like           PF12832.2     77 sp|P54723|YFIG_BACSU -            482    0.0071   16.1   0.0   1   3   2.4e-06    0.0071   16.1   0.0    15    76    41   101    35   102 0.93 MFS_1 like family
Peripla_BP_2         PF01497.13   238 sp|O31567|YFIY_BACSU -            325   3.3e-34  118.0   0.9   1   1   1.3e-37     4e-34  117.8   0.9     1   236    57   298    57   300 0.91 Periplasmic binding protein
ETRAMP               PF09716.5     84 sp|O31567|YFIY_BACSU -            325   0.00057   19.7   0.7   1   2   9.4e-07    0.0028   17.5   0.1     6    43     5    41     1    84 0.71 Malarial early transcribed membrane protein (ETRAMP)
Oxidored_nitro       PF00148.14   398 sp|O31567|YFIY_BACSU -            325   0.00066   18.4   0.0   1   1   3.4e-07     0.001   17.8   0.0   287   353    65   128    53   144 0.80 Nitrogenase component 1 type Oxidoreductase
DUF2606              PF10794.4    131 sp|O31567|YFIY_BACSU -            325     0.088   12.2   0.2   1   1   8.9e-05      0.26   10.7   0.2    17    53     9    45     2    66 0.86 Protein of unknown function (DUF2606)
Lysis_col            PF02402.11    46 sp|O31567|YFIY_BACSU -            325      0.25   10.9   1.0   1   1   0.00016      0.48   10.0   1.0     1    20     1    22     1    24 0.75 Lysis protein
FecCD                PF01032.13   311 sp|O31568|YFIZ_BACSU -            333   8.4e-93  310.5  32.3   1   1   1.4e-96     1e-92  310.2  32.3     1   311    19   329    18   329 0.99 FecCD transport family
Adeno_E3_14_5        PF04834.7     97 sp|O31568|YFIZ_BACSU -            333     0.031   14.6   0.1   1   1   9.7e-06     0.072   13.5   0.1    20    68     6    54     3    74 0.79 Early E3 14.5 kDa protein
ABC_tran             PF00005.22   137 sp|P94440|YFIL_BACSU -            311   8.5e-34  116.7   0.0   1   1     9e-37   1.5e-33  116.0   0.0     2   136    18   160    17   161 0.98 ABC transporter
AAA_21               PF13304.1    303 sp|P94440|YFIL_BACSU -            311   6.6e-13   49.2   0.3   1   2   1.7e-05     0.027   14.4   0.3     3    22    31    50    29    70 0.83 AAA domain
AAA_21               PF13304.1    303 sp|P94440|YFIL_BACSU -            311   6.6e-13   49.2   0.3   2   2     4e-11   6.6e-08   32.8   0.0   232   298   128   191    93   196 0.88 AAA domain
AAA_15               PF13175.1    415 sp|P94440|YFIL_BACSU -            311   4.4e-05   22.7   0.2   2   2   1.2e-06    0.0019   17.2   0.1   366   410   145   190   129   192 0.87 AAA ATPase domain
AAA_29               PF13555.1     62 sp|P94440|YFIL_BACSU -            311    0.0015   17.9   0.7   1   1     2e-06    0.0033   16.9   0.7    16    50    21    53    14    59 0.78 P-loop containing region of AAA domain
AAA_23               PF13476.1    202 sp|P94440|YFIL_BACSU -            311    0.0098   16.2   0.2   1   1   7.7e-06     0.013   15.8   0.2    15    41    20    49     2   146 0.82 AAA domain
DUF258               PF03193.11   161 sp|P94440|YFIL_BACSU -            311     0.062   12.4   0.3   1   1   6.8e-05      0.11   11.6   0.3    21    67    12    59     2    85 0.75 Protein of unknown function, DUF258
SbcCD_C              PF13558.1     90 sp|P94440|YFIL_BACSU -            311      0.12   12.2   0.0   1   1    0.0005      0.83    9.6   0.0    62    89   149   176   111   177 0.80 Putative exonuclease SbcCD, C subunit
GFO_IDH_MocA         PF01408.17   120 sp|P94437|YFII_BACSU -            393   1.3e-28   99.8   0.0   1   1   6.8e-32     2e-28   99.2   0.0     1   120    13   144    13   144 0.94 Oxidoreductase family, NAD-binding Rossmann fold
GFO_IDH_MocA_C       PF02894.12   115 sp|P94437|YFII_BACSU -            393   4.3e-25   87.7   0.0   1   1   2.3e-28   6.9e-25   87.0   0.0     1   114   156   280   156   281 0.98 Oxidoreductase family, C-terminal alpha/beta domain
Saccharop_dh         PF03435.13   386 sp|P94437|YFII_BACSU -            393     0.014   14.3   0.0   1   1   7.6e-06     0.023   13.7   0.0    71   112    89   137    52   147 0.84 Saccharopine dehydrogenase
Semialdhyde_dh       PF01118.19   121 sp|P94437|YFII_BACSU -            393     0.019   15.2   0.0   1   1   1.4e-05     0.043   14.1   0.0    56    94    78   114    34   120 0.81 Semialdehyde dehydrogenase, NAD binding domain
PTCB-BRCT            PF12738.2     63 sp|P94437|YFII_BACSU -            393     0.031   14.1   0.0   1   1   4.5e-05      0.13   12.0   0.0    34    56   173   195   163   197 0.91 twin BRCT domain
MFS_1                PF07690.11   352 sp|O31561|YFIS_BACSU -            417   2.9e-37  128.1  49.1   1   2   5.1e-32   3.8e-28   98.2  22.5     3   291    17   296    15   301 0.82 Major Facilitator Superfamily
MFS_1                PF07690.11   352 sp|O31561|YFIS_BACSU -            417   2.9e-37  128.1  49.1   2   2   4.5e-13   3.3e-09   35.9  31.2    28   171   250   395   240   414 0.88 Major Facilitator Superfamily
MFS_3                PF05977.8    524 sp|O31561|YFIS_BACSU -            417   1.1e-27   96.4  22.8   1   1   1.8e-31   1.4e-27   96.0  22.8    14   392    14   396     4   413 0.83 Transmembrane secretion effector
ABC2_membrane_3      PF12698.2    344 sp|P94442|YFIN_BACSU -            385   6.5e-43  147.0   4.4   1   1   1.6e-46   8.1e-43  146.7   4.4     4   343    23   380    20   381 0.86 ABC-2 family transporter protein
ABC2_membrane        PF01061.19   210 sp|P94442|YFIN_BACSU -            385   1.7e-29  102.5   7.5   1   2   0.00018      0.89    8.6   0.0     4    41     5    41     2    60 0.82 ABC-2 type transporter
ABC2_membrane        PF01061.19   210 sp|P94442|YFIN_BACSU -            385   1.7e-29  102.5   7.5   2   2   1.9e-30   9.2e-27   93.5   5.8    54   208   197   351   157   353 0.87 ABC-2 type transporter
ABC2_membrane_2      PF12679.2    277 sp|P94442|YFIN_BACSU -            385   1.1e-09   37.5   8.0   1   1   3.2e-13   1.6e-09   37.0   8.0     2   269     6   380     5   384 0.81 ABC-2 family transporter protein
ABC2_membrane_3      PF12698.2    344 sp|P94441|YFIM_BACSU -            396   8.5e-39  133.5   7.3   1   1   3.6e-42   1.1e-38  133.1   7.3     1   343    20   390    20   391 0.79 ABC-2 family transporter protein
ABC2_membrane        PF01061.19   210 sp|P94441|YFIM_BACSU -            396   1.4e-20   73.3  14.4   2   2   1.5e-23   4.4e-20   71.7  11.3    52   209   206   363   189   363 0.88 ABC-2 type transporter
ABC2_membrane_2      PF12679.2    277 sp|P94441|YFIM_BACSU -            396   1.8e-18   66.4   5.0   1   1     1e-21     3e-18   65.6   5.0     2   207     6   334     5   390 0.77 ABC-2 family transporter protein
ABC2_membrane_4      PF12730.2    232 sp|P94441|YFIM_BACSU -            396   5.9e-10   38.7   6.0   1   1   2.9e-13   8.6e-10   38.1   6.0    10   181    19   337    14   390 0.73 ABC-2 family transporter protein
ABC2_membrane_5      PF13346.1    206 sp|P94441|YFIM_BACSU -            396       1.5    8.1  12.5   2   2   3.9e-05      0.12   11.6   7.3    37   138   208   306   196   339 0.73 ABC-2 family transporter protein
DinB_2               PF12867.2    127 sp|O31562|YFIT_BACSU -            178   5.6e-22   78.4   2.5   1   1   1.8e-25   6.7e-22   78.1   2.5     2   127    31   168    30   168 0.95 DinB superfamily
MDMPI_N              PF11716.3    140 sp|O31562|YFIT_BACSU -            178   9.1e-09   35.8   0.6   1   1   2.4e-12   9.1e-09   35.8   0.6     3   107    33   134    31   145 0.71 Mycothiol maleylpyruvate isomerase N-terminal domain
DinB                 PF05163.7    169 sp|O31562|YFIT_BACSU -            178   1.5e-06   28.0   2.4   1   1   4.9e-10   1.8e-06   27.7   2.4    12   148    29   176    20   178 0.89 DinB family
DUF664               PF04978.7    150 sp|O31562|YFIT_BACSU -            178   0.00099   19.3   1.5   1   1   3.5e-07    0.0013   18.9   1.5     4   140    29   167    26   174 0.80 Protein of unknown function (DUF664)
MFS_1                PF07690.11   352 sp|O31563|YFIU_BACSU -            518   2.5e-51  174.4  38.8   1   1   1.5e-54   4.5e-51  173.6  38.8     2   352    19   416    18   416 0.88 Major Facilitator Superfamily
Sugar_tr             PF00083.19   451 sp|O31563|YFIU_BACSU -            518     3e-16   59.0  22.5   1   2   4.8e-17   1.4e-13   50.2   9.9     7   194    20   192    14   202 0.89 Sugar (and other) transporter
Sugar_tr             PF00083.19   451 sp|O31563|YFIU_BACSU -            518     3e-16   59.0  22.5   2   2   3.7e-06     0.011   14.3   4.7    55   162   318   428   282   441 0.76 Sugar (and other) transporter
TRI12                PF06609.8    599 sp|O31563|YFIU_BACSU -            518     5e-07   28.3  17.1   1   1   2.3e-10   6.8e-07   27.8  17.1    83   550    53   507    14   516 0.69 Fungal trichothecene efflux pump (TRI12)
MFS_2                PF13347.1    428 sp|O31563|YFIU_BACSU -            518     5e-06   25.1  22.1   1   3     1e-06    0.0031   15.9   1.6   234   335    22   121     2   130 0.81 MFS/sugar transport protein
MFS_2                PF13347.1    428 sp|O31563|YFIU_BACSU -            518     5e-06   25.1  22.1   3   3   6.3e-08   0.00019   19.9   4.0   221   379   270   420   265   440 0.80 MFS/sugar transport protein
OATP                 PF03137.15   539 sp|O31563|YFIU_BACSU -            518   0.00014   20.1  10.9   3   3   4.5e-07    0.0013   16.8   0.0   297   375   266   342   260   361 0.80 Organic Anion Transporter Polypeptide (OATP) family
Acyl_transf_3        PF01757.17   340 sp|O31559|YFIQ_BACSU -            362   6.3e-21   74.5  40.1   1   1   4.9e-25   7.3e-21   74.3  40.1     6   336     8   326     3   330 0.82 Acyltransferase family
UPF0060              PF02694.10   107 sp|O31553|YFJF_BACSU -            109   6.6e-51  170.8   9.4   1   1   2.5e-54   7.4e-51  170.6   9.4     1   107     2   109     2   109 0.99 Uncharacterised BCR, YnfA/UPF0060 family
EamA                 PF00892.15   126 sp|O31553|YFJF_BACSU -            109   2.2e-05   24.4   8.9   1   1   4.3e-08   0.00013   22.0   8.9    28   125     3   104     1   105 0.77 EamA-like transporter family
EmrE                 PF13536.1    113 sp|O31553|YFJF_BACSU -            109    0.0033   17.6  10.9   1   1   1.4e-06    0.0042   17.2  10.9    11   105     6   104     1   107 0.72 Multidrug resistance efflux transporter
MFS_1                PF07690.11   352 sp|O31553|YFJF_BACSU -            109      0.66    8.6  14.4   1   1   3.5e-05       0.1   11.2   8.2    22    81    47   105    33   108 0.48 Major Facilitator Superfamily
DUF2207              PF09972.4    511 sp|O31553|YFJF_BACSU -            109         1    7.8   3.6   1   1   0.00022      0.64    8.5   2.5   398   444    30    77     2    94 0.67 Predicted membrane protein (DUF2207)
tRNA_U5-meth_tr      PF05958.6    352 sp|O31545|YFJO_BACSU -            466     7e-21   74.3   0.6   1   1   1.2e-22   8.6e-20   70.7   0.6   153   346   277   457    97   463 0.82 tRNA (Uracil-5-)-methyltransferase
TRAM                 PF01938.15    61 sp|O31545|YFJO_BACSU -            466     9e-14   51.0   1.2   1   1   1.3e-16     9e-14   51.0   1.2     3    60    13    67    11    68 0.97 TRAM domain
Methyltransf_31      PF13847.1    152 sp|O31545|YFJO_BACSU -            466   6.3e-11   42.0   0.0   1   1   2.6e-13   1.9e-10   40.5   0.0     3   112   317   424   315   459 0.72 Methyltransferase domain
Methyltransf_26      PF13659.1    117 sp|O31545|YFJO_BACSU -            466   1.1e-06   28.5   0.0   1   1   2.9e-09   2.1e-06   27.7   0.0     3    81   320   398   318   461 0.87 Methyltransferase domain
MTS                  PF05175.9    170 sp|O31545|YFJO_BACSU -            466   3.2e-06   26.6   0.0   1   1   1.4e-08     1e-05   25.0   0.0    32   107   318   396   301   412 0.77 Methyltransferase small domain
Cons_hypoth95        PF03602.10   183 sp|O31545|YFJO_BACSU -            466   3.3e-05   23.3   0.0   1   1     1e-07   7.1e-05   22.2   0.0    41   153   316   421   303   442 0.77 Conserved hypothetical protein 95
Met_10               PF02475.11   200 sp|O31545|YFJO_BACSU -            466   5.7e-05   22.7   0.3   1   1   1.9e-07   0.00013   21.6   0.3     7   148   219   362   215   397 0.79 Met-10+ like-protein
Methyltransf_15      PF09445.5    164 sp|O31545|YFJO_BACSU -            466   0.00028   20.4   0.0   1   1   9.7e-07   0.00069   19.2   0.0     2    83   319   400   318   415 0.92 RNA cap guanine-N2 methyltransferase
UPF0020              PF01170.13   180 sp|O31545|YFJO_BACSU -            466   0.00065   19.3   0.1   1   1   3.3e-06    0.0023   17.5   0.0    24   115   313   396   309   399 0.84 Putative RNA methylase family UPF0020
Methyltransf_25      PF13649.1    101 sp|O31545|YFJO_BACSU -            466    0.0022   18.3   0.0   1   1   1.9e-05     0.013   15.8   0.0     1    72   321   392   321   430 0.81 Methyltransferase domain
Methyltransf_32      PF13679.1    141 sp|O31545|YFJO_BACSU -            466    0.0068   16.1   0.0   2   2   0.00013     0.093   12.4   0.0    13    82   306   365   299   393 0.81 Methyltransferase domain
SecD-TM1             PF13721.1    101 sp|O31545|YFJO_BACSU -            466     0.015   15.5   0.1   1   1   5.8e-05     0.041   14.1   0.1    31    95   218   284   209   287 0.87 SecD export protein N-terminal TM region
Fe-ADH_2             PF13685.1    250 sp|O31545|YFJO_BACSU -            466     0.016   14.4   0.1   1   1   3.9e-05     0.028   13.7   0.1     6    83   245   329   240   340 0.73 Iron-containing alcohol dehydrogenase
Ubie_methyltran      PF01209.13   233 sp|O31545|YFJO_BACSU -            466     0.019   14.0   0.1   1   1   5.1e-05     0.036   13.1   0.1    43   109   312   376   298   391 0.86 ubiE/COQ5 methyltransferase family
Methyltransf_11      PF08241.7     95 sp|O31545|YFJO_BACSU -            466     0.029   14.8   0.0   1   1   0.00024      0.17   12.4   0.0     5    53   326   376   322   381 0.91 Methyltransferase domain
PrmA                 PF06325.8    295 sp|O31545|YFJO_BACSU -            466     0.035   13.2   0.5   1   1   0.00012     0.082   12.0   0.0   159   219   315   374   301   393 0.80 Ribosomal protein L11 methyltransferase (PrmA)
PDGF                 PF00341.12    82 sp|O31545|YFJO_BACSU -            466     0.049   13.7   0.2   1   1    0.0002      0.14   12.2   0.2    13    71    69   123    65   130 0.62 PDGF/VEGF domain
TehB                 PF03848.9    192 sp|O31545|YFJO_BACSU -            466      0.05   12.7   0.1   1   1   0.00017      0.12   11.5   0.0    14    75   301   362   287   373 0.85 Tellurite resistance protein TehB
Methyltransf_12      PF08242.7     99 sp|O31545|YFJO_BACSU -            466     0.061   13.8   0.0   1   1   0.00027      0.19   12.2   0.0     4    56   325   375   322   393 0.86 Methyltransferase domain
NADH-G_4Fe-4S_3      PF10588.4     41 sp|O31545|YFJO_BACSU -            466      0.13   11.5   1.6   1   2    0.0005      0.35   10.1   0.4    16    40    82   106    75   106 0.90 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region
HhH-GPD              PF00730.20   108 sp|O31544|YFJP_BACSU -            287   1.6e-21   76.5   0.0   1   1   1.8e-25   2.7e-21   75.8   0.0     2   108   124   273   123   273 0.97 HhH-GPD superfamily base excision DNA repair protein
CorA                 PF01544.13   292 sp|O31543|YFJQ_BACSU -            319   1.1e-80  270.8   2.5   1   1   8.5e-85   1.3e-80  270.6   2.5     4   290    29   309    26   312 0.96 CorA-like Mg2+ transporter protein
NAD_binding_2        PF03446.10   163 sp|O34969|YFJR_BACSU -            286   2.1e-42  144.7   0.5   1   1   3.4e-45   2.9e-42  144.2   0.5     2   162     1   161     1   162 0.98 NAD binding domain of 6-phosphogluconate dehydrogenase
NAD_binding_11       PF14833.1    122 sp|O34969|YFJR_BACSU -            286   3.1e-18   65.9   0.3   1   1   8.4e-21   7.3e-18   64.7   0.2     3   121   167   284   166   285 0.94 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase
F420_oxidored        PF03807.12    96 sp|O34969|YFJR_BACSU -            286   4.2e-11   43.1   0.5   1   2   1.3e-11   1.1e-08   35.3   0.1     1    68     2    63     2    74 0.90 NADP oxidoreductase coenzyme F420-dependent
2-Hacid_dh_C         PF02826.14   178 sp|O34969|YFJR_BACSU -            286   4.7e-07   29.1   0.1   1   1   8.3e-10   7.2e-07   28.5   0.1    38   101     2    65     1   109 0.85 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain
Shikimate_DH         PF01488.15   135 sp|O34969|YFJR_BACSU -            286   2.2e-06   27.7   0.1   1   1     5e-09   4.3e-06   26.8   0.1    14    84     2    65     1    99 0.84 Shikimate / quinate 5-dehydrogenase
3HCDH_N              PF02737.13   180 sp|O34969|YFJR_BACSU -            286   2.7e-06   27.1   0.2   1   1   6.9e-09     6e-06   26.0   0.2     1    89     2    87     2    91 0.83 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain
IlvN                 PF07991.7    165 sp|O34969|YFJR_BACSU -            286   5.1e-06   25.9   0.1   1   1   1.2e-08   1.1e-05   24.9   0.1     6    71     2    67     1   108 0.91 Acetohydroxy acid isomeroreductase, catalytic domain
ApbA                 PF02558.11   151 sp|O34969|YFJR_BACSU -            286   7.5e-05   22.2   0.0   1   1     3e-07   0.00026   20.4   0.0     1    46     3    49     3   157 0.95 Ketopantoate reductase PanE/ApbA
TrkA_N               PF02254.13   116 sp|O34969|YFJR_BACSU -            286   0.00019   21.4   2.0   1   1   1.8e-06    0.0016   18.4   0.8     1    74     3    68     3    76 0.77 TrkA-N domain
NAD_binding_10       PF13460.1    183 sp|O34969|YFJR_BACSU -            286   0.00059   19.8   0.5   1   1   1.2e-06    0.0011   19.0   0.4     1   103     3   100     3   136 0.73 NADH(P)-binding
NAD_Gly3P_dh_N       PF01210.18   157 sp|O34969|YFJR_BACSU -            286   0.00079   19.1   0.0   1   1   1.8e-06    0.0016   18.1   0.0     1    50     2    51     2    73 0.88 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus
NAD_binding_7        PF13241.1    103 sp|O34969|YFJR_BACSU -            286    0.0023   18.1   0.0   1   1   1.1e-05    0.0095   16.1   0.1     9    72     2    68     1    75 0.77 Putative NAD(P)-binding
OCD_Mu_crystall      PF02423.10   314 sp|O34969|YFJR_BACSU -            286    0.0055   15.5   0.1   1   1   9.6e-06    0.0084   14.9   0.1   131   207     2    70     1    94 0.80 Ornithine cyclodeaminase/mu-crystallin family
Saccharop_dh         PF03435.13   386 sp|O34969|YFJR_BACSU -            286    0.0069   15.4   0.1   1   1   1.3e-05     0.011   14.6   0.1     1    49     3    47     3   112 0.81 Saccharopine dehydrogenase
DUF2520              PF10728.4    132 sp|O34969|YFJR_BACSU -            286    0.0094   15.4   0.1   1   1   2.2e-05     0.019   14.3   0.1     6    78   135   210   131   217 0.80 Domain of unknown function (DUF2520)
UDPG_MGDP_dh_N       PF03721.9    185 sp|O34969|YFJR_BACSU -            286     0.026   13.8   0.0   1   1   7.7e-05     0.067   12.5   0.0     1    39     1    39     1    54 0.90 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain
GFO_IDH_MocA         PF01408.17   120 sp|O34969|YFJR_BACSU -            286     0.071   13.6   0.1   1   1   0.00028      0.24   11.9   0.0     1    50     1    53     1   116 0.67 Oxidoreductase family, NAD-binding Rossmann fold
YfkB                 PF08756.5    153 sp|O34400|YFKA_BACSU -            373   1.6e-85  284.3   0.0   1   1     8e-89   2.4e-85  283.7   0.0     1   152   221   372   221   373 0.99 YfkB-like domain
Radical_SAM          PF04055.16   166 sp|O34400|YFKA_BACSU -            373     4e-15   56.3   0.0   1   1   3.9e-18   1.2e-14   54.8   0.0     2   155    37   190    36   197 0.90 Radical SAM superfamily
Fer4_14              PF13394.1    119 sp|O34400|YFKA_BACSU -            373   9.4e-09   35.3   0.0   1   1   6.7e-12     2e-08   34.2   0.0     2    96    36   126    35   139 0.82 4Fe-4S single cluster domain
Fer4_12              PF13353.1    139 sp|O34400|YFKA_BACSU -            373   1.4e-06   28.5   0.0   1   1   9.7e-10   2.9e-06   27.4   0.0    15    92    42   118    34   139 0.81 4Fe-4S single cluster domain
M20_dimer            PF07687.9    112 sp|O34400|YFKA_BACSU -            373     0.037   13.7   0.0   1   1   2.7e-05     0.079   12.7   0.0     9    68   209   303   205   310 0.91 Peptidase dimerisation domain
MS_channel           PF00924.13   206 sp|O35043|YFKC_BACSU -            280   1.7e-32  112.4   0.4   1   1   8.7e-36   2.6e-32  111.8   0.4     3   204    61   267    59   269 0.85 Mechanosensitive ion channel
TraT                 PF05818.7    215 sp|O35043|YFKC_BACSU -            280     0.021   14.2   0.0   1   1   1.2e-05     0.035   13.5   0.0    71   132    46   107    41   117 0.94 Enterobacterial TraT complement resistance protein
DUF4395              PF14340.1    131 sp|O35043|YFKC_BACSU -            280     0.092   12.8   0.7   1   1   4.9e-05      0.15   12.1   0.7    26   108    15    97     6   106 0.84 Domain of unknown function (DUF4395)
TrbC                 PF04956.8     99 sp|O35043|YFKC_BACSU -            280       2.9    7.9  11.1   2   2    0.0003       0.9    9.5   3.5    45    97    53   105    37   107 0.85 TrbC/VIRB2 family
MFS_1                PF07690.11   352 sp|O34929|YFKF_BACSU -            391   8.1e-40  136.5  51.1   1   2   1.2e-21     3e-18   65.6  18.7     2   186    10   190     9   209 0.84 Major Facilitator Superfamily
MFS_1                PF07690.11   352 sp|O34929|YFKF_BACSU -            391   8.1e-40  136.5  51.1   2   2   1.1e-24   2.7e-21   75.6  25.9     5   175   211   376   203   388 0.85 Major Facilitator Superfamily
MFS_3                PF05977.8    524 sp|O34929|YFKF_BACSU -            391   7.3e-09   34.2  10.5   1   2   1.4e-06    0.0036   15.5   1.1   240   391    23   175     7   203 0.80 Transmembrane secretion effector
MFS_3                PF05977.8    524 sp|O34929|YFKF_BACSU -            391   7.3e-09   34.2  10.5   2   2     5e-09   1.2e-05   23.6   2.6    42   192   234   379   227   387 0.82 Transmembrane secretion effector
MFS_2                PF13347.1    428 sp|O34929|YFKF_BACSU -            391   1.2e-05   23.8  24.4   1   2   0.00013      0.32    9.3   8.8   227   328     6   105     2   120 0.91 MFS/sugar transport protein
MFS_2                PF13347.1    428 sp|O34929|YFKF_BACSU -            391   1.2e-05   23.8  24.4   2   2   1.1e-07   0.00028   19.4   8.8   177   364   159   339   107   353 0.71 MFS/sugar transport protein
PUCC                 PF03209.10   403 sp|O34929|YFKF_BACSU -            391   8.3e-05   21.4  14.1   1   2   6.9e-07    0.0017   17.1   6.7   212   383     5   177     2   181 0.83 PUCC protein
PUCC                 PF03209.10   403 sp|O34929|YFKF_BACSU -            391   8.3e-05   21.4  14.1   2   2   0.00025      0.61    8.7   0.7    86   164   287   365   245   381 0.85 PUCC protein
UNC-93               PF05978.11   157 sp|O34929|YFKF_BACSU -            391   0.00017   21.1   1.2   1   2   6.7e-08   0.00017   21.1   1.2    20   130    24   133     6   152 0.84 Ion channel regulatory protein UNC-93
PMP22_Claudin        PF00822.15   166 sp|O34929|YFKF_BACSU -            391     0.031   13.9   0.2   1   1   1.3e-05     0.031   13.9   0.2    91   164   146   216   112   218 0.79 PMP-22/EMP/MP20/Claudin family
LMWPc                PF01451.16   138 sp|O35016|YFKJ_BACSU -            156   2.9e-43  147.5   0.0   1   1   2.2e-47   3.2e-43  147.3   0.0     1   138     4   147     4   147 0.98 Low molecular weight phosphotyrosine protein phosphatase
DUF1128              PF06569.6     71 sp|O35019|YFKK_BACSU -             71   1.9e-34  117.1   3.0   1   1   7.1e-38   2.1e-34  117.0   3.0     1    71     1    71     1    71 0.99 Protein of unknown function (DUF1128)
Acetyltransf_11      PF13720.1     83 sp|O35019|YFKK_BACSU -             71     0.011   15.9   0.0   1   1   6.3e-06     0.019   15.2   0.0     8    59    13    64    11    71 0.78 Udp N-acetylglucosamine O-acyltransferase; Domain 2
Imm3                 PF14425.1    117 sp|O35019|YFKK_BACSU -             71     0.025   14.5   0.2   1   1   9.9e-06     0.029   14.3   0.2    62   105     7    51     3    64 0.86 Immunity protein Imm3
Matrilin_ccoil       PF10393.4     47 sp|O35019|YFKK_BACSU -             71     0.065   12.6   0.1   1   1   5.6e-05      0.16   11.3   0.0    26    44     7    25     4    28 0.87 Trimeric coiled-coil oligomerisation domain of matrilin
CbiJ                 PF02571.9    250 sp|O35019|YFKK_BACSU -             71       0.1   11.8   0.0   1   1     4e-05      0.12   11.6   0.0   117   175     5    62     2    69 0.84 Precorrin-6x reductase CbiJ/CobK
MFS_1                PF07690.11   352 sp|O34597|YFKL_BACSU -            396   9.8e-40  136.3  64.5   1   2   1.2e-36   1.7e-32  112.4  33.8     2   326    13   326    12   328 0.83 Major Facilitator Superfamily
MFS_1                PF07690.11   352 sp|O34597|YFKL_BACSU -            396   9.8e-40  136.3  64.5   2   2   6.7e-14   9.9e-10   37.6  22.7    37   174   250   387   250   395 0.90 Major Facilitator Superfamily
Nitroreductase       PF00881.19   165 sp|O34475|YFKO_BACSU -            221   1.2e-28  100.0   0.0   1   1   1.8e-32   2.7e-28   98.8   0.0     2   165    13   201    12   201 0.90 Nitroreductase family
GerA                 PF03323.8    470 sp|O34486|YFKQ_BACSU -            513  6.4e-188  624.6   3.4   1   1  5.1e-192  7.6e-188  624.4   3.4     1   468    29   491    29   493 0.98 Bacillus/Clostridium GerA spore germination protein
Spore_GerAC          PF05504.6    171 sp|O35028|YFKR_BACSU -            384   8.7e-35  120.0   3.0   1   1   1.8e-38   1.3e-34  119.4   3.0     1   169   211   377   211   379 0.98 Spore germination B3/ GerAC like, C-terminal
CITED                PF04487.7    214 sp|O35028|YFKR_BACSU -            384     0.087   13.0   0.1   1   1   1.9e-05      0.14   12.3   0.1    73   119   228   274   203   307 0.78 CITED
Spore_permease       PF03845.8    320 sp|O34573|YFKT_BACSU -            358   1.6e-36  125.5  26.0   1   1   2.2e-40   1.6e-36  125.5  26.0     3   311     5   309     3   319 0.92 Spore germination protein
Na_Ala_symp          PF01235.12   416 sp|O34708|YFLA_BACSU -            471  1.3e-119  399.4  27.8   1   1  1.1e-123  1.7e-119  399.1  27.8     9   401    53   445    46   467 0.94 Sodium:alanine symporter family
Lactamase_B          PF00753.22   194 sp|O34409|YFLN_BACSU -            264   3.7e-32  111.5   1.1   1   1   5.8e-36   4.3e-32  111.3   1.1     5   194    30   241    26   241 0.98 Metallo-beta-lactamase superfamily
Lactamase_B_2        PF12706.2    194 sp|O34409|YFLN_BACSU -            264   6.8e-07   29.0   0.1   1   1   1.4e-10     1e-06   28.4   0.1     3   152    46   203    44   231 0.63 Beta-lactamase superfamily domain
TctC                 PF03401.9    274 sp|O34439|YFLP_BACSU -            319   3.9e-19   68.6   0.0   1   1   3.4e-23     5e-19   68.2   0.0    17   268    65   315    46   318 0.88 Tripartite tricarboxylate transporter family receptor
Na_sulph_symp        PF00939.14   471 sp|O34726|YFLS_BACSU -            478  9.9e-188  624.7  44.2   1   1  7.6e-192  1.1e-187  624.5  44.2     3   471    14   478    12   478 0.99 Sodium:sulfate symporter transmembrane region
Peripla_BP_2         PF01497.13   238 sp|O34348|YFMC_BACSU -            315   8.1e-41  139.7   0.8   1   1   1.3e-44   9.6e-41  139.4   0.8     1   235    61   288    61   291 0.94 Periplasmic binding protein
HXXSHH               PF07586.6    302 sp|O34348|YFMC_BACSU -            315       0.1   11.5   0.1   1   1     2e-05      0.15   10.9   0.1   134   206   129   197    91   224 0.81 Protein of unknown function (DUF1552)
FecCD                PF01032.13   311 sp|O34933|YFMD_BACSU -            333   5.8e-96  320.9  32.8   1   1  4.8e-100   7.1e-96  320.6  32.8     2   311    23   328    18   328 0.98 FecCD transport family
FecCD                PF01032.13   311 sp|O34832|YFME_BACSU -            333     4e-98  328.0  28.6   1   1  1.3e-101   4.9e-98  327.7  28.6     1   309    21   326    20   328 0.98 FecCD transport family
Herpes_US9           PF06072.6     60 sp|O34832|YFME_BACSU -            333     0.045   13.5   0.3   1   2   1.2e-05     0.045   13.5   0.3    24    56     4    36     1    39 0.75 Alphaherpesvirus tegument protein US9
DUF4131              PF13567.1    176 sp|O34832|YFME_BACSU -            333       2.4    7.5  18.1   3   3    0.0002      0.75    9.1   0.5     2    57   184   254   183   259 0.89 Domain of unknown function (DUF4131)
ABC_tran             PF00005.22   137 sp|O34510|YFMF_BACSU -            266   7.1e-35  120.2   0.0   1   1   2.4e-37   9.4e-35  119.8   0.0     2   136    20   167    19   168 0.96 ABC transporter
AAA_21               PF13304.1    303 sp|O34510|YFMF_BACSU -            266   8.3e-14   52.2   0.3   1   2   3.6e-08   1.4e-05   25.1   0.0     1    22    31    52    31    79 0.83 AAA domain
AAA_21               PF13304.1    303 sp|O34510|YFMF_BACSU -            266   8.3e-14   52.2   0.3   2   2     3e-08   1.2e-05   25.4   0.1   230   299   133   200   105   201 0.86 AAA domain
AAA_15               PF13175.1    415 sp|O34510|YFMF_BACSU -            266     2e-09   36.9   0.0   1   2   1.8e-07   6.8e-05   22.0   0.0    17    48    23    55    10   109 0.84 AAA ATPase domain
AAA_15               PF13175.1    415 sp|O34510|YFMF_BACSU -            266     2e-09   36.9   0.0   2   2   9.2e-05     0.036   13.1   0.0   372   406   160   194   147   199 0.83 AAA ATPase domain
SMC_N                PF02463.14   220 sp|O34510|YFMF_BACSU -            266   4.3e-08   32.6   0.1   1   1     1e-09   3.9e-07   29.5   0.1    25   195    30   194    19   217 0.73 RecF/RecN/SMC N terminal domain
AAA_29               PF13555.1     62 sp|O34510|YFMF_BACSU -            266     1e-06   28.1   0.1   1   1   5.3e-09   2.1e-06   27.1   0.1    13    51    20    57    18    62 0.87 P-loop containing region of AAA domain
AAA_25               PF13481.1    194 sp|O34510|YFMF_BACSU -            266   5.9e-05   22.5   0.3   1   2   1.2e-05    0.0046   16.3   0.1    30    62    26    60    16    82 0.81 AAA domain
AAA_22               PF13401.1    131 sp|O34510|YFMF_BACSU -            266   6.4e-05   23.1   0.8   1   1   5.4e-07   0.00021   21.4   0.8     3   122    28   196    25   203 0.77 AAA domain
AAA_16               PF13191.1    185 sp|O34510|YFMF_BACSU -            266    0.0001   22.3   0.8   1   1   9.8e-07   0.00038   20.4   0.8    22   131    27   121    19   216 0.44 AAA ATPase domain
ABC_ATPase           PF09818.4    448 sp|O34510|YFMF_BACSU -            266   0.00011   21.0   0.4   1   2   0.00069      0.27    9.7   0.1   240   266    24    51     8    56 0.87 Predicted ATPase of the ABC class
ABC_ATPase           PF09818.4    448 sp|O34510|YFMF_BACSU -            266   0.00011   21.0   0.4   2   2    0.0014      0.53    8.8   0.0   322   351   139   168   130   221 0.88 Predicted ATPase of the ABC class
AAA_23               PF13476.1    202 sp|O34510|YFMF_BACSU -            266   0.00022   21.5   0.1   1   1   9.7e-07   0.00038   20.8   0.1    13    39    22    49    11    67 0.81 AAA domain
AAA_14               PF13173.1    128 sp|O34510|YFMF_BACSU -            266   0.00094   19.0   0.1   1   2   2.9e-05     0.011   15.6   0.0     2    35    29    62    28    88 0.76 AAA domain
ATP-synt_ab          PF00006.20   215 sp|O34510|YFMF_BACSU -            266     0.001   18.5   0.0   1   2   0.00014     0.056   12.9   0.0    12    39    26    53    17    93 0.84 ATP synthase alpha/beta family, nucleotide-binding domain
AAA_28               PF13521.1    163 sp|O34510|YFMF_BACSU -            266    0.0015   18.4   0.1   1   1   1.1e-05    0.0045   16.9   0.1     3    35    33    72    31   168 0.84 AAA domain
SRP54                PF00448.17   196 sp|O34510|YFMF_BACSU -            266    0.0018   17.7   0.0   1   1   9.9e-06    0.0039   16.6   0.0     3    43    31    71    29    95 0.89 SRP54-type protein, GTPase domain
DUF2813              PF11398.3    373 sp|O34510|YFMF_BACSU -            266     0.002   17.2   0.0   1   1   7.7e-06     0.003   16.6   0.0    23    71    30    78    19    83 0.85 Protein of unknown function (DUF2813)
DUF258               PF03193.11   161 sp|O34510|YFMF_BACSU -            266    0.0022   17.2   0.1   1   1   8.9e-06    0.0035   16.5   0.1    13    59     6    53     1    80 0.83 Protein of unknown function, DUF258
AAA_5                PF07728.9    139 sp|O34510|YFMF_BACSU -            266    0.0045   16.7   0.1   1   1   9.2e-05     0.036   13.7   0.1     4    30    34    60    32    70 0.79 AAA domain (dynein-related subfamily)
AAA_18               PF13238.1    129 sp|O34510|YFMF_BACSU -            266    0.0045   17.2   0.1   1   2   0.00017     0.067   13.4   0.0     3    24    34    70    33   126 0.74 AAA domain
NACHT                PF05729.7    166 sp|O34510|YFMF_BACSU -            266     0.012   15.3   0.7   1   1   0.00014     0.056   13.1   0.2     3    25    32    54    30    60 0.88 NACHT domain
DUF815               PF05673.8    250 sp|O34510|YFMF_BACSU -            266     0.013   14.4   0.3   1   2    0.0011      0.42    9.4   0.0    58    81    34    57    25    88 0.75 Protein of unknown function (DUF815)
AAA_17               PF13207.1    121 sp|O34510|YFMF_BACSU -            266     0.015   16.0   0.3   1   1   8.4e-05     0.033   15.0   0.3     3    23    33    53    31   217 0.86 AAA domain
AAA                  PF00004.24   132 sp|O34510|YFMF_BACSU -            266     0.016   15.4   0.0   1   1   8.7e-05     0.034   14.3   0.0     3    52    34    85    32   120 0.85 ATPase family associated with various cellular activities (AAA)
Mg_chelatase         PF01078.16   207 sp|O34510|YFMF_BACSU -            266     0.019   14.1   0.1   1   1   0.00013      0.05   12.7   0.1    27    65    34    72    25    89 0.85 Magnesium chelatase, subunit ChlI
G-alpha              PF00503.15   389 sp|O34510|YFMF_BACSU -            266     0.023   13.4   0.1   1   1   0.00012     0.047   12.3   0.0    63    86    34    57    24    81 0.87 G-protein alpha subunit
AAA_33               PF13671.1    143 sp|O34510|YFMF_BACSU -            266     0.026   14.3   0.0   1   1   0.00011     0.041   13.7   0.0     3    41    33    75    31   197 0.77 AAA domain
Viral_helicase1      PF01443.13   234 sp|O34510|YFMF_BACSU -            266     0.029   13.8   0.0   1   1   0.00019     0.074   12.5   0.0     5    39    36    65    33    88 0.72 Viral (Superfamily 1) RNA helicase
RNA_helicase         PF00910.17   107 sp|O34510|YFMF_BACSU -            266     0.041   14.0   0.0   1   1   0.00019     0.073   13.2   0.0     3    26    34    57    32   115 0.85 RNA helicase
Rad17                PF03215.10   519 sp|O34510|YFMF_BACSU -            266     0.059   12.0   0.1   1   1   0.00021     0.083   11.5   0.1    44    72    28    56    17    78 0.84 Rad17 cell cycle checkpoint protein
Miro                 PF08477.8    119 sp|O34510|YFMF_BACSU -            266     0.076   13.5   0.1   1   1   0.00063      0.25   11.8   0.0     4    25    34    55    32    88 0.80 Miro-like protein
MobB                 PF03205.9    140 sp|O34510|YFMF_BACSU -            266      0.11   12.1   0.1   1   1    0.0014      0.56    9.8   0.1     2    27    31    56    30    98 0.83 Molybdopterin guanine dinucleotide synthesis protein B
AAA_30               PF13604.1    196 sp|O34510|YFMF_BACSU -            266      0.13   11.8   0.4   1   1    0.0007      0.27   10.7   0.4    18    49    29    60    22   204 0.87 AAA domain
Adeno_IVa2           PF02456.10   370 sp|O34510|YFMF_BACSU -            266      0.13   10.8   0.0   1   2     0.002       0.8    8.2   0.0    88   122    30    62    11    80 0.83 Adenovirus IVa2 protein
MMR_HSR1             PF01926.18   116 sp|O34510|YFMF_BACSU -            266      0.14   12.0   0.3   1   1    0.0014      0.55   10.2   0.3     3    22    33    52    31   230 0.71 50S ribosome-binding GTPase
AAA_19               PF13245.1     76 sp|O34510|YFMF_BACSU -            266      0.14   11.8   0.0   1   1   0.00084      0.33   10.7   0.0     9    43    28    57    22    89 0.83 Part of AAA domain
SIS                  PF01380.17   131 sp|O34510|YFMF_BACSU -            266      0.16   11.5   0.0   1   1   0.00067      0.26   10.8   0.0    65   110   174   219   159   232 0.89 SIS domain
Arch_ATPase          PF01637.13   234 sp|O34510|YFMF_BACSU -            266      0.18   11.4   0.1   1   1    0.0012      0.48   10.0   0.1    19    44    28    53    21   220 0.86 Archaeal ATPase
MFS_1                PF07690.11   352 sp|O34440|YFMI_BACSU -            406   1.1e-19   70.4  59.7   1   2   1.1e-17   5.4e-14   51.6  38.4     2   308     9   317     8   322 0.75 Major Facilitator Superfamily
MFS_1                PF07690.11   352 sp|O34440|YFMI_BACSU -            406   1.1e-19   70.4  59.7   2   2   6.9e-12   3.4e-08   32.5  13.3    35   167   255   389   244   404 0.91 Major Facilitator Superfamily
MFS_3                PF05977.8    524 sp|O34440|YFMI_BACSU -            406   3.4e-12   45.2  17.9   1   1   9.8e-16   4.9e-12   44.7  17.9    18   392    11   392     2   404 0.75 Transmembrane secretion effector
Sugar_tr             PF00083.19   451 sp|O34440|YFMI_BACSU -            406    0.0075   14.8   2.5   2   3   1.5e-06    0.0075   14.8   2.5    45   105   251   311   228   323 0.83 Sugar (and other) transporter
ADH_zinc_N           PF00107.21   130 sp|O34812|YFMJ_BACSU -            339   6.8e-23   80.6   0.0   1   1   4.3e-26   1.1e-22   80.0   0.0     1   129   157   294   157   295 0.96 Zinc-binding dehydrogenase
ADH_zinc_N_2         PF13602.1    127 sp|O34812|YFMJ_BACSU -            339     5e-09   37.1   0.0   1   1     6e-12   1.5e-08   35.5   0.0     1   125   190   331   190   333 0.70 Zinc-binding dehydrogenase
ELFV_dehydrog        PF00208.16   244 sp|O34812|YFMJ_BACSU -            339    0.0033   17.0   0.3   1   1     2e-06    0.0051   16.4   0.3    31    92   145   207   124   232 0.81 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase
DFP                  PF04127.10   185 sp|O34812|YFMJ_BACSU -            339     0.017   14.7   0.1   1   1   1.7e-05     0.041   13.4   0.0    27    85   154   218   149   222 0.80 DNA / pantothenate metabolism flavoprotein
NAD_binding_10       PF13460.1    183 sp|O34812|YFMJ_BACSU -            339     0.021   14.8   0.1   1   1   1.2e-05     0.031   14.3   0.1     1    70   149   225   149   271 0.72 NADH(P)-binding
DapB_N               PF01113.15   124 sp|O34812|YFMJ_BACSU -            339      0.15   11.9   0.6   1   2   0.00035      0.86    9.5   0.6     3    67   149   210   148   223 0.74 Dihydrodipicolinate reductase, N-terminus
Acetyltransf_7       PF13508.1     79 sp|O34536|YFMK_BACSU -            148   5.1e-07   29.7   0.0   1   1   3.2e-10   7.9e-07   29.1   0.0     2    55    49   101    47   131 0.69 Acetyltransferase (GNAT) domain
Acetyltransf_1       PF00583.19    83 sp|O34536|YFMK_BACSU -            148   4.5e-06   26.6   0.0   1   1   2.4e-09   5.9e-06   26.2   0.0     9    83    63   130    41   130 0.84 Acetyltransferase (GNAT) family
Acetyltransf_3       PF13302.1    142 sp|O34536|YFMK_BACSU -            148   5.3e-05   23.4   0.0   1   1   2.9e-08   7.2e-05   22.9   0.0    36   142    23   130     5   130 0.67 Acetyltransferase (GNAT) domain
Acetyltransf_10      PF13673.1    117 sp|O34536|YFMK_BACSU -            148   6.1e-05   23.1   0.0   1   1   3.4e-08   8.4e-05   22.6   0.0     9   117    18   129    15   129 0.67 Acetyltransferase (GNAT) domain
Acetyltransf_8       PF13523.1    152 sp|O34536|YFMK_BACSU -            148    0.0011   18.8   0.0   1   1   8.6e-07    0.0021   17.9   0.0    35   139    37   132     7   137 0.76 Acetyltransferase (GNAT) domain
Acetyltransf_9       PF13527.1    127 sp|O34536|YFMK_BACSU -            148     0.094   12.5   0.0   1   1   8.4e-05      0.21   11.4   0.0    16   100    17   100    12   113 0.78 Acetyltransferase (GNAT) domain
DEAD                 PF00270.24   169 sp|O34750|YFML_BACSU -            376   9.5e-44  148.8   1.4   1   1   6.5e-47   1.6e-43  148.1   1.4     1   168    28   193    28   194 0.96 DEAD/DEAH box helicase
Helicase_C           PF00271.26    78 sp|O34750|YFML_BACSU -            376     1e-18   66.9   0.0   1   1   8.9e-22   2.2e-18   65.8   0.0     3    78   261   335   259   335 0.94 Helicase conserved C-terminal domain
ResIII               PF04851.10   184 sp|O34750|YFML_BACSU -            376   4.7e-07   29.8   0.2   1   1   3.4e-10   8.4e-07   28.9   0.2     5   183    28   188     8   189 0.77 Type III restriction enzyme, res subunit
CMS1                 PF14617.1    252 sp|O34750|YFML_BACSU -            376   1.8e-05   23.9   0.7   1   1   1.2e-08   2.9e-05   23.2   0.7   127   235    73   177    62   194 0.73 U3-containing 90S pre-ribosomal complex subunit
SecA_DEAD            PF07517.9    266 sp|O34750|YFML_BACSU -            376     0.029   13.6   0.0   1   2   9.9e-05      0.24   10.6   0.0    62   111    11    62     3    68 0.80 SecA DEAD-like domain
PhoH                 PF02562.11   205 sp|O34750|YFML_BACSU -            376     0.039   13.1   0.0   1   1   3.8e-05     0.093   11.9   0.0     6    37    28    58    24    86 0.78 PhoH-like protein
ABC_tran             PF00005.22   137 sp|O34512|YFMM_BACSU -            518   1.9e-51  173.9   2.2   1   2   1.6e-29   5.3e-27   94.7   0.1     2   137    20   191    19   191 0.79 ABC transporter
ABC_tran             PF00005.22   137 sp|O34512|YFMM_BACSU -            518   1.9e-51  173.9   2.2   2   2     3e-24     1e-21   77.6   0.0     3   137   342   469   340   469 0.86 ABC transporter
ABC_tran_2           PF12848.2     85 sp|O34512|YFMM_BACSU -            518   1.7e-21   75.8   7.3   1   1   1.3e-23   4.4e-21   74.5   7.3     1    85   230   315   230   315 0.94 ABC transporter
AAA_21               PF13304.1    303 sp|O34512|YFMM_BACSU -            518   4.2e-15   56.4  12.3   2   4   1.4e-07   4.5e-05   23.5   1.0   219   301   136   222    57   224 0.74 AAA domain
AAA_21               PF13304.1    303 sp|O34512|YFMM_BACSU -            518   4.2e-15   56.4  12.3   3   4   2.2e-06   0.00072   19.6   0.1     3    57   354   403   353   437 0.70 AAA domain
AAA_21               PF13304.1    303 sp|O34512|YFMM_BACSU -            518   4.2e-15   56.4  12.3   4   4   0.00037      0.12   12.2   0.0   238   302   442   501   428   502 0.79 AAA domain
SMC_N                PF02463.14   220 sp|O34512|YFMM_BACSU -            518   7.3e-11   41.7   6.2   2   4   1.6e-06   0.00053   19.2   0.1   119   210   112   231    75   239 0.76 RecF/RecN/SMC N terminal domain
SMC_N                PF02463.14   220 sp|O34512|YFMM_BACSU -            518   7.3e-11   41.7   6.2   4   4   0.00019     0.064   12.4   0.0   120   203   417   501   378   508 0.80 RecF/RecN/SMC N terminal domain
AAA_15               PF13175.1    415 sp|O34512|YFMM_BACSU -            518   2.2e-07   30.2  12.4   3   4   0.00015      0.05   12.6   0.0    26    57   354   400   320   439 0.77 AAA ATPase domain
AAA_15               PF13175.1    415 sp|O34512|YFMM_BACSU -            518   2.2e-07   30.2  12.4   4   4   0.00036      0.12   11.4   0.1   367   397   458   486   452   499 0.84 AAA ATPase domain
SbcCD_C              PF13558.1     90 sp|O34512|YFMM_BACSU -            518   6.7e-07   29.1   0.3   1   2    0.0026      0.85    9.5   0.0    26    87   156   204   135   207 0.73 Putative exonuclease SbcCD, C subunit
SbcCD_C              PF13558.1     90 sp|O34512|YFMM_BACSU -            518   6.7e-07   29.1   0.3   2   2   0.00028     0.094   12.6   0.1    10    89   416   484   409   485 0.70 Putative exonuclease SbcCD, C subunit
AAA_29               PF13555.1     62 sp|O34512|YFMM_BACSU -            518   1.4e-06   27.6   0.1   1   2   7.4e-05     0.024   14.1   0.0    12    43    19    49    17    64 0.79 P-loop containing region of AAA domain
AAA_29               PF13555.1     62 sp|O34512|YFMM_BACSU -            518   1.4e-06   27.6   0.1   2   2   0.00087      0.29   10.7   0.0    20    41   348   368   341   372 0.83 P-loop containing region of AAA domain
RNA_helicase         PF00910.17   107 sp|O34512|YFMM_BACSU -            518   1.7e-06   28.1   0.8   1   2   0.00057      0.19   11.9   0.0     3    46    34    73    32   108 0.72 RNA helicase
RNA_helicase         PF00910.17   107 sp|O34512|YFMM_BACSU -            518   1.7e-06   28.1   0.8   2   2    0.0003     0.099   12.8   0.0     1    42   353   395   353   424 0.77 RNA helicase
DUF258               PF03193.11   161 sp|O34512|YFMM_BACSU -            518   1.8e-06   27.2   0.8   1   2   0.00023     0.076   12.2   0.0    32    67    26    61     9    79 0.84 Protein of unknown function, DUF258
DUF258               PF03193.11   161 sp|O34512|YFMM_BACSU -            518   1.8e-06   27.2   0.8   2   2   0.00015     0.048   12.8   0.2    35    60   350   386   339   487 0.77 Protein of unknown function, DUF258
AAA_25               PF13481.1    194 sp|O34512|YFMM_BACSU -            518   6.7e-06   25.6   0.0   2   2   2.1e-05    0.0068   15.8   0.0    21    58   338   375   319   403 0.81 AAA domain
AAA_16               PF13191.1    185 sp|O34512|YFMM_BACSU -            518   1.8e-05   24.8   0.0   2   2   4.7e-05     0.015   15.2   0.0    26    54   352   385   343   491 0.75 AAA ATPase domain
AAA_14               PF13173.1    128 sp|O34512|YFMM_BACSU -            518   2.3e-05   24.2   2.7   3   3   0.00041      0.14   12.0   0.0     3    47   351   401   349   421 0.68 AAA domain
AAA                  PF00004.24   132 sp|O34512|YFMM_BACSU -            518   2.7e-05   24.3   0.0   2   2   0.00024     0.079   13.1   0.0     2    23   354   375   353   434 0.67 ATPase family associated with various cellular activities (AAA)
NACHT                PF05729.7    166 sp|O34512|YFMM_BACSU -            518   4.4e-05   23.1   0.0   2   2   6.6e-05     0.022   14.4   0.0     3    25   353   375   351   413 0.83 NACHT domain
AAA_28               PF13521.1    163 sp|O34512|YFMM_BACSU -            518   5.3e-05   23.2   0.0   2   2   0.00011     0.037   13.9   0.0     1    44   352   401   352   428 0.71 AAA domain
AAA_22               PF13401.1    131 sp|O34512|YFMM_BACSU -            518   7.3e-05   22.9   8.0   2   2   5.5e-05     0.018   15.1   1.2     7   123   353   494   347   499 0.71 AAA domain
FtsK_SpoIIIE         PF01580.13   205 sp|O34512|YFMM_BACSU -            518   8.3e-05   22.1   0.8   1   2   0.00022     0.071   12.5   0.2    27   139    18   125     8   264 0.75 FtsK/SpoIIIE family
Miro                 PF08477.8    119 sp|O34512|YFMM_BACSU -            518   8.4e-05   23.0   0.0   2   2   0.00014     0.047   14.1   0.0     1    26   352   380   352   412 0.71 Miro-like protein
AAA_17               PF13207.1    121 sp|O34512|YFMM_BACSU -            518   0.00023   21.9   5.3   1   2    0.0024       0.8   10.5   1.4     2    78    32   155    31   349 0.72 AAA domain
AAA_17               PF13207.1    121 sp|O34512|YFMM_BACSU -            518   0.00023   21.9   5.3   2   2    0.0012      0.41   11.4   0.1     1    22   352   373   352   489 0.55 AAA domain
NB-ARC               PF00931.17   287 sp|O34512|YFMM_BACSU -            518   0.00032   19.6   2.4   3   3   8.9e-05     0.029   13.2   0.0    21   109   352   466   342   494 0.73 NB-ARC domain
AAA_24               PF13479.1    213 sp|O34512|YFMM_BACSU -            518    0.0011   18.6   0.0   1   1   3.3e-06    0.0011   18.6   0.0     2    34   349   384   348   419 0.84 AAA domain
MMR_HSR1             PF01926.18   116 sp|O34512|YFMM_BACSU -            518    0.0015   18.4   4.2   1   2    0.0012       0.4   10.6   0.5     1    22    31    52    31   264 0.87 50S ribosome-binding GTPase
ATP-synt_ab          PF00006.20   215 sp|O34512|YFMM_BACSU -            518    0.0039   16.7   0.0   2   2    0.0006       0.2   11.1   0.0    14    39   349   374   345   439 0.83 ATP synthase alpha/beta family, nucleotide-binding domain
DUF815               PF05673.8    250 sp|O34512|YFMM_BACSU -            518    0.0057   15.6   0.1   2   2     0.003      0.97    8.2   0.0    52    78   349   375   344   378 0.87 Protein of unknown function (DUF815)
TrwB_AAD_bind        PF10412.4    386 sp|O34512|YFMM_BACSU -            518    0.0067   15.0   0.8   2   2     0.002      0.64    8.5   0.0    15    40   350   375   342   381 0.86 Type IV secretion-system coupling protein DNA-binding domain
AAA_23               PF13476.1    202 sp|O34512|YFMM_BACSU -            518     0.008   16.5  15.0   2   2   0.00035      0.11   12.7   1.2    22    40   353   371   339   499 0.64 AAA domain
SRP-alpha_N          PF04086.8    279 sp|O34512|YFMM_BACSU -            518     0.014   14.8   1.1   1   1   7.3e-05     0.024   14.0   1.1    79   138   238   297   224   322 0.80 Signal recognition particle, alpha subunit, N-terminal
UPF0079              PF02367.12   123 sp|O34512|YFMM_BACSU -            518     0.014   15.0   0.1   2   2    0.0022      0.74    9.4   0.0     9    39   344   374   337   382 0.83 Uncharacterised P-loop hydrolase UPF0079
T2SE                 PF00437.15   272 sp|O34512|YFMM_BACSU -            518     0.027   13.3   0.0   2   2    0.0018      0.59    8.9   0.0   114   154   311   376   249   382 0.70 Type II/IV secretion system protein
Arch_ATPase          PF01637.13   234 sp|O34512|YFMM_BACSU -            518     0.031   13.9   0.1   2   2   9.3e-05     0.031   13.9   0.1    21    64   351   399   343   493 0.67 Archaeal ATPase
DUF4446              PF14584.1    152 sp|O34512|YFMM_BACSU -            518     0.055   13.2   3.2   2   2    0.0028      0.92    9.3   1.3    13    79   224   292   211   306 0.77 Protein of unknown function (DUF4446)
ADIP                 PF11559.3    151 sp|O34512|YFMM_BACSU -            518     0.089   12.6   3.9   1   1   0.00064      0.21   11.4   3.9    74   142   233   301   227   307 0.87 Afadin- and alpha -actinin-Binding
Pox_A32              PF04665.7    241 sp|O34512|YFMM_BACSU -            518       1.5    8.0   6.2   1   1    0.0024      0.79    8.9   0.1    15    37   352   374   344   379 0.88 Poxvirus A32 protein
MFS_1                PF07690.11   352 sp|O06473|YFMO_BACSU -            396   5.6e-37  127.2  69.9   1   2   2.8e-30   1.4e-26   93.0  35.6     2   233    24   240    23   245 0.89 Major Facilitator Superfamily
MFS_1                PF07690.11   352 sp|O06473|YFMO_BACSU -            396   5.6e-37  127.2  69.9   2   2   4.9e-15   2.4e-11   42.9  24.3    30   172   243   384   240   394 0.90 Major Facilitator Superfamily
MFS_2                PF13347.1    428 sp|O06473|YFMO_BACSU -            396   6.1e-06   24.9  39.3   1   3   5.1e-05      0.25    9.6   6.7   210   308     3   101     1   137 0.85 MFS/sugar transport protein
MFS_2                PF13347.1    428 sp|O06473|YFMO_BACSU -            396   6.1e-06   24.9  39.3   2   3   3.4e-08   0.00017   20.1  23.0   164   381   156   358   118   365 0.81 MFS/sugar transport protein
MFS_3                PF05977.8    524 sp|O06473|YFMO_BACSU -            396     0.022   12.8  36.5   1   1     6e-06      0.03   12.4  36.5    36   393    44   385    18   391 0.79 Transmembrane secretion effector
ABC_tran             PF00005.22   137 sp|O06476|YFMR_BACSU -            629   2.9e-53  179.8   0.2   1   2   8.8e-31   2.8e-28   98.9   0.1     2   137    20   187    19   187 0.87 ABC transporter
ABC_tran             PF00005.22   137 sp|O06476|YFMR_BACSU -            629   2.9e-53  179.8   0.2   2   2   2.7e-24   8.8e-22   77.8   0.0     8   137   341   469   334   469 0.78 ABC transporter
AAA_21               PF13304.1    303 sp|O06476|YFMR_BACSU -            629   6.3e-25   88.7   4.8   1   4   9.1e-08   2.9e-05   24.1   0.1     3    25    33    53    32    77 0.73 AAA domain
AAA_21               PF13304.1    303 sp|O06476|YFMR_BACSU -            629   6.3e-25   88.7   4.8   2   4   1.1e-08   3.5e-06   27.1   0.0   220   303   142   219    92   219 0.77 AAA domain
AAA_21               PF13304.1    303 sp|O06476|YFMR_BACSU -            629   6.3e-25   88.7   4.8   3   4   4.9e-06    0.0016   18.4   0.5     3    21   348   366   347   412 0.77 AAA domain
AAA_21               PF13304.1    303 sp|O06476|YFMR_BACSU -            629   6.3e-25   88.7   4.8   4   4   1.1e-05    0.0035   17.3   0.0   232   282   436   483   392   501 0.82 AAA domain
ABC_tran_2           PF12848.2     85 sp|O06476|YFMR_BACSU -            629   1.1e-14   53.9   4.4   1   2   3.5e-17   1.1e-14   53.9   4.4     1    77   226   300   226   307 0.91 ABC transporter
ABC_tran_2           PF12848.2     85 sp|O06476|YFMR_BACSU -            629   1.1e-14   53.9   4.4   2   2   0.00083      0.27   11.1   2.3     5    41   513   549   512   584 0.81 ABC transporter
SMC_N                PF02463.14   220 sp|O06476|YFMR_BACSU -            629   4.7e-13   48.8   2.5   1   3   2.3e-08   7.3e-06   25.3   0.1    26   205    31   221     7   232 0.70 RecF/RecN/SMC N terminal domain
SMC_N                PF02463.14   220 sp|O06476|YFMR_BACSU -            629   4.7e-13   48.8   2.5   3   3    0.0018      0.59    9.3   0.0   128   205   432   503   377   517 0.68 RecF/RecN/SMC N terminal domain
AAA_22               PF13401.1    131 sp|O06476|YFMR_BACSU -            629     4e-09   36.7   4.6   1   2   2.9e-06   0.00094   19.3   0.9     9   123    34   212    27   220 0.84 AAA domain
AAA_22               PF13401.1    131 sp|O06476|YFMR_BACSU -            629     4e-09   36.7   4.6   2   2   0.00062       0.2   11.7   0.2     9    49   349   392   345   498 0.49 AAA domain
DUF258               PF03193.11   161 sp|O06476|YFMR_BACSU -            629   7.3e-09   35.0   0.1   1   2     8e-06    0.0026   16.9   0.1    19    69    12    63     2    66 0.85 Protein of unknown function, DUF258
DUF258               PF03193.11   161 sp|O06476|YFMR_BACSU -            629   7.3e-09   35.0   0.1   2   2     2e-05    0.0064   15.7   0.0    27    67   335   376   316   406 0.72 Protein of unknown function, DUF258
AAA_29               PF13555.1     62 sp|O06476|YFMR_BACSU -            629   9.4e-08   31.4   0.1   1   2   1.5e-05    0.0048   16.4   0.0    12    40    19    46    16    52 0.84 P-loop containing region of AAA domain
AAA_29               PF13555.1     62 sp|O06476|YFMR_BACSU -            629   9.4e-08   31.4   0.1   2   2   0.00025     0.082   12.4   0.0    25    44   346   365   335   372 0.83 P-loop containing region of AAA domain
AAA_23               PF13476.1    202 sp|O06476|YFMR_BACSU -            629   1.4e-07   32.0  16.7   1   2    0.0001     0.032   14.5   5.0    15   190    22   260    10   297 0.51 AAA domain
AAA_23               PF13476.1    202 sp|O06476|YFMR_BACSU -            629   1.4e-07   32.0  16.7   2   2   8.6e-07   0.00028   21.2   3.9    24   201   349   586   347   616 0.62 AAA domain
Miro                 PF08477.8    119 sp|O06476|YFMR_BACSU -            629   1.5e-07   31.9   0.2   1   2   0.00041      0.13   12.7   0.0     1    34    31    60    31   100 0.76 Miro-like protein
Miro                 PF08477.8    119 sp|O06476|YFMR_BACSU -            629   1.5e-07   31.9   0.2   2   2   3.7e-05     0.012   16.0   0.0     1    41   346   389   346   426 0.66 Miro-like protein
AAA_25               PF13481.1    194 sp|O06476|YFMR_BACSU -            629   2.8e-07   30.1   0.1   2   2   1.7e-05    0.0054   16.1   0.0    28   140   339   486   329   493 0.57 AAA domain
AAA_17               PF13207.1    121 sp|O06476|YFMR_BACSU -            629   3.9e-07   30.9   7.9   1   2   9.4e-05      0.03   15.1   1.0     1    43    31   109    31   295 0.76 AAA domain
AAA_17               PF13207.1    121 sp|O06476|YFMR_BACSU -            629   3.9e-07   30.9   7.9   2   2   1.1e-05    0.0036   18.1   0.9     1    23   346   368   346   602 0.84 AAA domain
SbcCD_C              PF13558.1     90 sp|O06476|YFMR_BACSU -            629   3.3e-06   26.9   0.3   1   2    0.0025       0.8    9.6   0.0    26    84   152   197   138   203 0.71 Putative exonuclease SbcCD, C subunit
SbcCD_C              PF13558.1     90 sp|O06476|YFMR_BACSU -            629   3.3e-06   26.9   0.3   2   2   0.00091      0.29   11.0   0.1    30    89   438   484   430   485 0.74 Putative exonuclease SbcCD, C subunit
AAA                  PF00004.24   132 sp|O06476|YFMR_BACSU -            629   5.8e-06   26.5   0.4   1   2   0.00069      0.22   11.7   0.0     3    21    34    52    32   104 0.85 ATPase family associated with various cellular activities (AAA)
AAA                  PF00004.24   132 sp|O06476|YFMR_BACSU -            629   5.8e-06   26.5   0.4   2   2   0.00087      0.28   11.3   0.1     3    22   349   368   347   467 0.76 ATPase family associated with various cellular activities (AAA)
MMR_HSR1             PF01926.18   116 sp|O06476|YFMR_BACSU -            629   7.5e-06   25.8   0.0   2   2   0.00013     0.041   13.8   0.0     1    23   346   368   346   442 0.78 50S ribosome-binding GTPase
AAA_14               PF13173.1    128 sp|O06476|YFMR_BACSU -            629   8.2e-06   25.7   0.4   2   2   0.00051      0.16   11.8   0.1     5    42   347   393   344   508 0.71 AAA domain
AAA_16               PF13191.1    185 sp|O06476|YFMR_BACSU -            629   5.1e-05   23.3   5.9   1   2    0.0005      0.16   11.9   0.0    27   131    32   140    16   211 0.55 AAA ATPase domain
AAA_16               PF13191.1    185 sp|O06476|YFMR_BACSU -            629   5.1e-05   23.3   5.9   2   2   0.00019     0.061   13.3   0.1    28    54   348   374   331   485 0.83 AAA ATPase domain
ArgK                 PF03308.11   267 sp|O06476|YFMR_BACSU -            629   5.5e-05   22.0   1.7   1   2   0.00038      0.12   11.0   0.0    16    57    16    58     3    67 0.81 ArgK protein
ArgK                 PF03308.11   267 sp|O06476|YFMR_BACSU -            629   5.5e-05   22.0   1.7   2   2    0.0018      0.58    8.8   0.1    15    57   330   372   314   378 0.77 ArgK protein
NACHT                PF05729.7    166 sp|O06476|YFMR_BACSU -            629   7.7e-05   22.4   0.2   2   2   0.00083      0.27   10.8   0.1     4    21   348   365   345   369 0.88 NACHT domain
AAA_18               PF13238.1    129 sp|O06476|YFMR_BACSU -            629   0.00012   22.4   5.6   1   2    0.0012      0.39   11.0   0.7     1    42    32    84    32   232 0.79 AAA domain
AAA_18               PF13238.1    129 sp|O06476|YFMR_BACSU -            629   0.00012   22.4   5.6   2   2   0.00039      0.12   12.6   0.3     1    27   347   388   347   506 0.79 AAA domain
MobB                 PF03205.9    140 sp|O06476|YFMR_BACSU -            629   0.00016   21.3   1.5   2   2    0.0011      0.35   10.5   0.1     2    22   346   366   345   387 0.86 Molybdopterin guanine dinucleotide synthesis protein B
T2SE                 PF00437.15   272 sp|O06476|YFMR_BACSU -            629   0.00018   20.4   0.3   2   2   0.00018     0.058   12.2   0.0    29   151   244   367   234   412 0.77 Type II/IV secretion system protein
AAA_33               PF13671.1    143 sp|O06476|YFMR_BACSU -            629    0.0002   21.2   0.1   2   2    0.0024      0.78    9.6   0.0     4    39   349   387   347   438 0.66 AAA domain
AAA_15               PF13175.1    415 sp|O06476|YFMR_BACSU -            629   0.00033   19.8   0.4   2   2     0.001      0.32    9.9   0.0    27    43   349   369   326   425 0.82 AAA ATPase domain
AAA_19               PF13245.1     76 sp|O06476|YFMR_BACSU -            629   0.00037   20.1   0.4   1   2   0.00097      0.31   10.8   0.0    13    35    32    53    24    70 0.81 Part of AAA domain
ATP-synt_ab          PF00006.20   215 sp|O06476|YFMR_BACSU -            629   0.00059   19.4   0.0   2   2   6.7e-05     0.021   14.2   0.0    13    83   342   417   330   427 0.75 ATP synthase alpha/beta family, nucleotide-binding domain
AAA_13               PF13166.1    712 sp|O06476|YFMR_BACSU -            629   0.00092   17.8  14.6   1   4   0.00013     0.043   12.2   0.2     9    55    23    68    15   175 0.80 AAA domain
AAA_13               PF13166.1    712 sp|O06476|YFMR_BACSU -            629   0.00092   17.8  14.6   4   4    0.0011      0.35    9.2   1.4   392   480   537   624   492   628 0.74 AAA domain
Dynamin_N            PF00350.18   168 sp|O06476|YFMR_BACSU -            629    0.0016   18.3   9.3   2   2   5.6e-05     0.018   14.8   0.0     1    55   347   399   347   494 0.81 Dynamin family
AAA_10               PF12846.2    304 sp|O06476|YFMR_BACSU -            629    0.0031   16.9   4.0   2   2    0.0014      0.45    9.8   0.2     6    34   349   377   347   489 0.88 AAA-like domain
PhoH                 PF02562.11   205 sp|O06476|YFMR_BACSU -            629    0.0055   15.9   0.0   1   2   0.00038      0.12   11.5   0.0    15    51    25    62    11    63 0.84 PhoH-like protein
AAA_28               PF13521.1    163 sp|O06476|YFMR_BACSU -            629     0.011   15.6   0.1   2   2   3.5e-05     0.011   15.6   0.1     1    24   346   369   346   399 0.86 AAA domain
SRP54                PF00448.17   196 sp|O06476|YFMR_BACSU -            629     0.019   14.4   0.2   2   2    0.0025      0.79    9.1   0.0     6    33   349   376   345   421 0.80 SRP54-type protein, GTPase domain
Arch_ATPase          PF01637.13   234 sp|O06476|YFMR_BACSU -            629      0.03   14.0   8.8   2   2   0.00076      0.24   11.0   0.0    25    81   349   412   343   462 0.71 Archaeal ATPase
DUF812               PF05667.6    594 sp|O06476|YFMR_BACSU -            629       2.2    6.6  12.4   1   1   3.2e-05      0.01   14.3   2.1   297   391   528   626   496   629 0.69 Protein of unknown function (DUF812)
AA_permease_2        PF13520.1    426 sp|Q797A7|YFNA_BACSU -            461   1.6e-60  204.8  55.9   1   1     6e-64   2.2e-60  204.3  55.9     1   401    26   428    26   454 0.87 Amino acid permease
AA_permease          PF00324.16   478 sp|Q797A7|YFNA_BACSU -            461   5.7e-43  146.9  52.0   1   1     2e-46   7.6e-43  146.5  52.0     2   423    31   425    30   452 0.91 Amino acid permease
AA_permease_C        PF13906.1     51 sp|Q797A7|YFNA_BACSU -            461   2.7e-14   52.7   8.5   4   4   7.3e-18   2.7e-14   52.7   8.5     1    51   407   457   407   457 0.99 C-terminus of AA_permease
Spore_permease       PF03845.8    320 sp|Q797A7|YFNA_BACSU -            461   5.3e-06   25.3  31.0   1   3   1.9e-06     0.007   15.0   6.3     1    95    25   122    25   136 0.90 Spore germination protein
Spore_permease       PF03845.8    320 sp|Q797A7|YFNA_BACSU -            461   5.3e-06   25.3  31.0   2   3   5.1e-09   1.9e-05   23.4   8.1   118   233   162   278   155   285 0.85 Spore germination protein
HAD_2                PF13419.1    176 sp|O06480|YFNB_BACSU -            235   4.7e-29  101.8   0.1   1   1   1.5e-32   5.6e-29  101.5   0.1     1   175     7   199     7   200 0.86 Haloacid dehalogenase-like hydrolase
Hydrolase            PF00702.21   215 sp|O06480|YFNB_BACSU -            235   7.9e-07   29.7   0.0   1   1   7.4e-10   2.7e-06   27.9   0.0     1   215     4   194     4   194 0.68 haloacid dehalogenase-like hydrolase
Hydrolase_like       PF13242.1     75 sp|O06480|YFNB_BACSU -            235   1.4e-06   27.9   0.0   1   1   1.1e-09   3.9e-06   26.4   0.0     3    50   154   202   152   223 0.80 HAD-hyrolase-like
Hydrolase_6          PF13344.1    101 sp|O06480|YFNB_BACSU -            235      0.14   12.0   0.0   2   2   0.00012      0.45   10.4   0.0     6    46    83   131    65   160 0.82 Haloacid dehalogenase-like hydrolase
MFS_1                PF07690.11   352 sp|O06481|YFNC_BACSU -            409   5.7e-38  130.5  85.2   1   2   2.3e-32   8.6e-29  100.3  46.8     4   350    26   364    23   365 0.74 Major Facilitator Superfamily
MFS_1                PF07690.11   352 sp|O06481|YFNC_BACSU -            409   5.7e-38  130.5  85.2   2   2     3e-15   1.1e-11   44.0  30.4     2   181   232   407   228   409 0.85 Major Facilitator Superfamily
MFS_2                PF13347.1    428 sp|O06481|YFNC_BACSU -            409   0.00022   19.7  35.5   1   1   1.3e-07   0.00048   18.6  35.5    24   344    43   343    23   399 0.74 MFS/sugar transport protein
OATP                 PF03137.15   539 sp|O06481|YFNC_BACSU -            409   0.00027   19.1   8.1   1   2   5.3e-07     0.002   16.2   1.5     3    91    21   110    19   114 0.92 Organic Anion Transporter Polypeptide (OATP) family
Sugar_tr             PF00083.19   451 sp|O06481|YFNC_BACSU -            409      0.13   10.8  41.1   2   3   7.8e-06     0.029   12.9   9.3     3   133   229   345   226   350 0.77 Sugar (and other) transporter
Sugar_tr             PF00083.19   451 sp|O06481|YFNC_BACSU -            409      0.13   10.8  41.1   3   3   0.00013      0.47    8.9   3.6    47    93   350   396   345   407 0.90 Sugar (and other) transporter
Glycos_transf_2      PF00535.21   169 sp|O06483|YFNE_BACSU -            392   1.3e-30  106.3   0.1   1   1   2.1e-33   3.1e-30  105.0   0.1     1   132     4   141     4   171 0.88 Glycosyl transferase family 2
Glyco_tranf_2_2      PF10111.4    281 sp|O06483|YFNE_BACSU -            392   6.6e-23   81.1   0.8   1   2   2.8e-17   4.2e-14   52.3   0.1     1   126     4   114     4   170 0.86 Glycosyltransferase like family 2
Glyco_tranf_2_2      PF10111.4    281 sp|O06483|YFNE_BACSU -            392   6.6e-23   81.1   0.8   2   2   8.6e-10   1.3e-06   27.7   0.1   168   228   200   259   140   288 0.76 Glycosyltransferase like family 2
Glyco_tranf_2_3      PF13641.1    228 sp|O06483|YFNE_BACSU -            392   5.8e-16   58.9   0.0   1   2   4.9e-15   7.3e-12   45.5   0.0     3   106     3   101     1   116 0.88 Glycosyltransferase like family 2
Glyco_tranf_2_3      PF13641.1    228 sp|O06483|YFNE_BACSU -            392   5.8e-16   58.9   0.0   2   2   0.00014      0.21   11.3   0.0   162   210   203   254   197   270 0.76 Glycosyltransferase like family 2
Glyco_transf_7C      PF02709.9     78 sp|O06483|YFNE_BACSU -            392   2.5e-05   23.6   0.0   1   1   3.4e-08     5e-05   22.6   0.0    10    65   191   245   188   257 0.88 N-terminal domain of galactosyltransferase
Glyco_trans_2_3      PF13632.1    193 sp|O06483|YFNE_BACSU -            392   8.8e-05   22.3   0.0   1   1   1.1e-07   0.00017   21.4   0.0    71   149   199   283   191   327 0.82 Glycosyl transferase family group 2
Glyco_transf_21      PF13506.1    175 sp|O06483|YFNE_BACSU -            392    0.0016   17.7   0.0   1   2   0.00035      0.52    9.5   0.0    23    67    74   116    69   163 0.84 Glycosyl transferase family 21
Glyco_tranf_2_5      PF13712.1    217 sp|O06483|YFNE_BACSU -            392    0.0075   15.5   0.0   1   1   9.7e-06     0.014   14.6   0.0    33    92    60   118    45   169 0.85 Glycosyltransferase like family
Glyco_tranf_2_4      PF13704.1     97 sp|O06483|YFNE_BACSU -            392     0.029   14.6   0.0   1   1   4.7e-05      0.07   13.4   0.0    21    81    33    91    10   104 0.75 Glycosyl transferase family 2
Glyco_transf_49      PF13896.1    317 sp|O06483|YFNE_BACSU -            392     0.054   12.5   0.0   1   2    0.0005      0.75    8.8   0.0   117   176    71   138    68   160 0.73 Glycosyl-transferase for dystroglycan
CHAD                 PF05235.9    231 sp|O06483|YFNE_BACSU -            392      0.13   11.8   0.6   2   2   0.00041      0.61    9.6   0.1   102   163   300   365   296   377 0.80 CHAD domain
Epimerase            PF01370.16   236 sp|O06485|YFNG_BACSU -            322   7.6e-54  182.6   0.0   1   1     1e-56   1.3e-53  181.9   0.0     1   234     9   247     9   249 0.96 NAD dependent epimerase/dehydratase family
3Beta_HSD            PF01073.14   280 sp|O06485|YFNG_BACSU -            322   1.8e-20   72.7   0.0   1   1   1.9e-23   2.4e-20   72.4   0.0     2   273    11   272    10   277 0.80 3-beta hydroxysteroid dehydrogenase/isomerase family
Polysacc_synt_2      PF02719.10   294 sp|O06485|YFNG_BACSU -            322   2.6e-18   65.9   0.0   1   1     8e-21   9.9e-18   64.0   0.0     1   244     9   264     9   289 0.66 Polysaccharide biosynthesis protein
NAD_binding_4        PF07993.7    249 sp|O06485|YFNG_BACSU -            322     1e-15   57.3   0.0   1   1   3.4e-18   4.2e-15   55.3   0.0     1   234    11   214    11   229 0.78 Male sterility protein
RmlD_sub_bind        PF04321.12   287 sp|O06485|YFNG_BACSU -            322   7.2e-15   54.6   0.0   1   1   7.9e-18   9.8e-15   54.1   0.0     2   235     8   271     7   313 0.86 RmlD substrate binding domain
NAD_binding_10       PF13460.1    183 sp|O06485|YFNG_BACSU -            322   1.1e-12   48.3   0.0   1   1   1.2e-15   1.5e-12   47.8   0.0     1   124     9   155     9   209 0.77 NADH(P)-binding
adh_short            PF00106.20   167 sp|O06485|YFNG_BACSU -            322     1e-07   31.9   0.0   1   1   1.5e-10   1.8e-07   31.2   0.0     2   140     8   132     7   141 0.82 short chain dehydrogenase
NmrA                 PF05368.8    233 sp|O06485|YFNG_BACSU -            322   3.8e-05   23.0   0.1   1   1   5.8e-08   7.2e-05   22.1   0.0     1    71     9    83     9   137 0.79 NmrA-like family
KR                   PF08659.5    181 sp|O06485|YFNG_BACSU -            322   0.00092   18.9   0.0   1   1   2.3e-06    0.0028   17.3   0.0     3   148     9   139     8   142 0.78 KR domain
Epimerase_Csub       PF13950.1     62 sp|O06485|YFNG_BACSU -            322     0.054   13.4   0.0   1   1   9.4e-05      0.12   12.3   0.0    20    54   281   315   264   319 0.80 UDP-glucose 4-epimerase C-term subunit
ELFV_dehydrog        PF00208.16   244 sp|O06485|YFNG_BACSU -            322     0.063   12.8   0.0   1   1    0.0001      0.13   11.8   0.0    31    66     5    39     2   107 0.73 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase
PCYCGC               PF13798.1    158 sp|O06485|YFNG_BACSU -            322       0.1   12.2   0.0   1   1   0.00014      0.18   11.5   0.0    44    79   268   303   233   309 0.90 Protein of unknown function with PCYCGC motif
DUF402               PF04167.8     72 sp|Q796Z1|YGAC_BACSU -            176   8.1e-24   83.2   1.4   1   1   1.1e-27   1.7e-23   82.2   1.4     5    72    59   124    57   124 0.98 Protein of unknown function (DUF402)
ABC_membrane         PF00664.18   275 sp|P71082|YGAD_BACSU -            580   1.7e-41  142.4   6.3   1   1   1.9e-44   2.2e-41  142.0   6.3     6   268    19   288    15   295 0.92 ABC transporter transmembrane region
ABC_tran             PF00005.22   137 sp|P71082|YGAD_BACSU -            580   1.7e-35  122.2   0.0   1   1   2.7e-38   3.1e-35  121.4   0.0     1   137   358   507   358   507 0.91 ABC transporter
SMC_N                PF02463.14   220 sp|P71082|YGAD_BACSU -            580   5.1e-08   32.4   0.1   1   1     2e-10   2.2e-07   30.3   0.1   135   211   366   549   221   555 0.79 RecF/RecN/SMC N terminal domain
Chordopox_L2         PF05803.7     87 sp|P71082|YGAD_BACSU -            580   0.00075   19.0   4.2   1   2   3.3e-06    0.0037   16.8   3.4    12    59   112   159   100   182 0.80 Chordopoxvirus L2 protein
DUF258               PF03193.11   161 sp|P71082|YGAD_BACSU -            580    0.0052   15.9   0.0   1   1   8.5e-06    0.0097   15.1   0.0    21    55   353   388   334   421 0.80 Protein of unknown function, DUF258
AAA_29               PF13555.1     62 sp|P71082|YGAD_BACSU -            580    0.0059   16.1   0.1   1   1   1.3e-05     0.015   14.8   0.1    14    40   360   385   355   388 0.82 P-loop containing region of AAA domain
ABC_ATPase           PF09818.4    448 sp|P71082|YGAD_BACSU -            580     0.032   12.8   0.1   2   2    0.0001      0.11   10.9   0.0   299   378   454   533   445   560 0.80 Predicted ATPase of the ABC class
NB-ARC               PF00931.17   287 sp|P71082|YGAD_BACSU -            580     0.089   11.6   0.0   1   1   0.00014      0.16   10.7   0.0     3    39   352   388   350   396 0.81 NB-ARC domain
AAA_16               PF13191.1    185 sp|P71082|YGAD_BACSU -            580     0.093   12.7   0.5   1   1   0.00028      0.32   10.9   0.5    22    51   366   395   354   533 0.53 AAA ATPase domain
ABC_membrane_3       PF13748.1    237 sp|P71082|YGAD_BACSU -            580      0.14   11.1   5.9   1   1   0.00074      0.84    8.6   5.8     4    61    10    73     8   210 0.61 ABC transporter transmembrane region
DUF939               PF06081.6    141 sp|P71083|YGAE_BACSU -            353   2.4e-43  147.3  20.5   1   1   1.4e-46   3.5e-43  146.8  20.5     1   141     1   142     1   142 0.99 Bacterial protein of unknown function (DUF939)
FUSC                 PF04632.7    650 sp|P71083|YGAE_BACSU -            353   3.1e-13   49.0   6.4   1   2   1.3e-07   0.00032   19.2   8.2     6    69     8    90     5    94 0.88 Fusaric acid resistance protein family
FUSC                 PF04632.7    650 sp|P71083|YGAE_BACSU -            353   3.1e-13   49.0   6.4   2   2   8.9e-10   2.2e-06   26.4   0.0   109   200   100   196    98   333 0.88 Fusaric acid resistance protein family
FUSC_2               PF13515.1    128 sp|P71083|YGAE_BACSU -            353     8e-06   25.7  17.0   1   1   5.2e-09   1.3e-05   25.1  17.0     1   128    16   138    14   138 0.86 Fusaric acid resistance protein-like
HPP                  PF04982.8    120 sp|P71083|YGAE_BACSU -            353    0.0022   17.8   4.4   1   1   1.9e-06    0.0046   16.7   4.4    29   113    56   140    52   148 0.82 HPP family
ALMT                 PF11744.3    406 sp|P71083|YGAE_BACSU -            353    0.0032   16.1   2.7   1   1   1.8e-06    0.0045   15.7   2.1   119   199    94   172    55   244 0.74 Aluminium activated malate transporter
DUF2755              PF10954.3    100 sp|P71083|YGAE_BACSU -            353      0.12   12.1   2.6   1   1   0.00011      0.27   10.9   2.6    24    97    12    94     4    97 0.78 Protein of unknown function (DUF2755)
Peptidase_S51        PF03575.12   154 sp|P71089|YGAJ_BACSU -            230   2.4e-44  150.7   0.0   1   1   4.5e-48   3.4e-44  150.3   0.0     1   154    49   196    49   196 0.97 Peptidase family S51
GATase_3             PF07685.9    158 sp|P71089|YGAJ_BACSU -            230     0.027   14.0   0.0   1   1   5.8e-06     0.043   13.4   0.0     7    56    83   131    79   161 0.79 CobB/CobQ-like glutamine amidotransferase domain
FAD_binding_4        PF01565.18   139 sp|Q796Y5|YGAK_BACSU -            451   8.3e-27   93.3   0.0   1   1   1.8e-30   1.3e-26   92.6   0.0     1   133    33   162    33   164 0.97 FAD binding domain
BBE                  PF08031.7     47 sp|Q796Y5|YGAK_BACSU -            451   9.4e-21   73.4   0.5   1   1   2.7e-24     2e-20   72.4   0.5     2    47   400   443   399   443 0.99 Berberine and berberine like
DUF2614              PF11023.3    114 sp|Q7WY74|YGZB_BACSU -            117   1.4e-59  198.7   2.4   1   1   3.3e-63   1.7e-59  198.5   2.4     3   114     3   114     1   114 0.99 Protein of unknown function (DUF2614)
Coat_F               PF07875.7     64 sp|C0H3X8|YGZC_BACSU -             90   1.4e-11   44.3   0.0   1   1     5e-15   2.5e-11   43.5   0.0     7    59    36    88    34    89 0.98 Coat F domain
DUF3231              PF11553.3    166 sp|C0H3X8|YGZC_BACSU -             90     0.035   13.6   0.1   2   2   1.2e-05     0.058   12.8   0.0   105   154    40    89    34    90 0.94 Protein of unknown function (DUF3231)
DUF4617              PF15395.1   1068 sp|C0H3X8|YGZC_BACSU -             90      0.22    9.5   0.1   1   1     5e-05      0.25    9.3   0.1   330   391    25    85     2    86 0.63 Domain of unknown function (DUF4617)
Peptidase_M20        PF01546.23   189 sp|O07598|YHAA_BACSU -            396   5.2e-29  101.1   1.3   1   1   8.9e-33   6.6e-29  100.7   1.3     1   187    79   390    79   392 0.93 Peptidase family M20/M25/M40
M20_dimer            PF07687.9    112 sp|O07598|YHAA_BACSU -            396   2.2e-07   30.5   0.3   2   2   8.4e-11   6.3e-07   29.1   0.1     8   105   192   284   190   288 0.93 Peptidase dimerisation domain
HD                   PF01966.17   122 sp|O07521|YHAM_BACSU -            314   1.3e-13   50.9   0.5   1   1   4.8e-17   3.6e-13   49.6   0.5     2   121   161   278   160   279 0.94 HD domain
tRNA_anti-codon      PF01336.20    75 sp|O07521|YHAM_BACSU -            314   4.4e-06   26.4   0.0   1   1   1.3e-09     1e-05   25.3   0.0    12    74    29    89    19    90 0.87 OB-fold nucleic acid binding domain
Metallophos          PF00149.23   200 sp|O07522|YHAO_BACSU -            408   1.1e-17   64.1   1.2   1   1   4.2e-21   3.1e-17   62.6   1.2     2   199     6   203     5   204 0.90 Calcineurin-like phosphoesterase
Metallophos_2        PF12850.2    156 sp|O07522|YHAO_BACSU -            408   6.9e-17   61.7   0.1   1   1   1.4e-20     1e-16   61.1   0.1     3   155     7   240     5   241 0.69 Calcineurin-like phosphoesterase superfamily domain
ABC_tran             PF00005.22   137 sp|C0SPB4|YHAQ_BACSU -            298     1e-28  100.3   0.0   1   1   8.1e-32   1.7e-28   99.6   0.0     2   136    18   157    17   158 0.96 ABC transporter
DUF4162              PF13732.1     84 sp|C0SPB4|YHAQ_BACSU -            298   7.9e-25   87.1   0.5   1   1   8.3e-28   1.8e-24   86.0   0.5     1    84   211   293   211   293 0.99 Domain of unknown function (DUF4162)
AAA_21               PF13304.1    303 sp|C0SPB4|YHAQ_BACSU -            298     9e-11   42.2   5.6   1   3   7.9e-06     0.017   15.1   0.3     3    25    31    59    29    85 0.67 AAA domain
AAA_21               PF13304.1    303 sp|C0SPB4|YHAQ_BACSU -            298     9e-11   42.2   5.6   2   3   4.7e-10     1e-06   28.9   0.2   222   297   115   187    78   189 0.82 AAA domain
AAA_23               PF13476.1    202 sp|C0SPB4|YHAQ_BACSU -            298   0.00047   20.5   6.6   1   1   2.1e-06    0.0045   17.3   6.6     7   132    11   137     8   285 0.52 AAA domain
SbcCD_C              PF13558.1     90 sp|C0SPB4|YHAQ_BACSU -            298     0.025   14.5   0.0   1   1   2.5e-05     0.052   13.4   0.0    62    83   146   167   122   173 0.86 Putative exonuclease SbcCD, C subunit
AAA_29               PF13555.1     62 sp|C0SPB4|YHAQ_BACSU -            298     0.039   13.4   0.0   1   1   3.5e-05     0.074   12.5   0.0    13    40    18    44    13    56 0.80 P-loop containing region of AAA domain
ECH                  PF00378.15   245 sp|O07533|YHAR_BACSU -            255   9.9e-53  178.7   1.2   1   1   1.5e-56   1.1e-52  178.6   1.2     2   245     6   248     5   248 0.98 Enoyl-CoA hydratase/isomerase family
ECH_C                PF13766.1    118 sp|O07533|YHAR_BACSU -            255    0.0036   17.4   0.2   2   2   1.6e-06     0.012   15.7   0.0    30    99   185   252   166   255 0.84 2-enoyl-CoA Hydratase C-terminal region
Na_H_Exchanger       PF00999.16   380 sp|O07536|YHAU_BACSU -            405   1.6e-63  214.5  54.1   1   1   1.4e-67   2.1e-63  214.1  54.1     4   378    12   377     8   379 0.94 Sodium/hydrogen exchanger family
DUF444               PF04285.7    421 sp|P45742|YHBH_BACSU -            392  1.5e-158  527.9  18.6   1   2   3.6e-69   5.3e-65  219.7   5.0     2   182     7   188     6   191 0.99 Protein of unknown function (DUF444)
DUF444               PF04285.7    421 sp|P45742|YHBH_BACSU -            392  1.5e-158  527.9  18.6   2   2   6.1e-98   9.1e-94  314.4   5.7   226   420   192   384   189   385 0.99 Protein of unknown function (DUF444)
HlyD_3               PF13437.1    105 sp|O31593|YHBJ_BACSU -            221   6.6e-24   84.2   8.9   1   2   1.3e-07   0.00015   22.0   0.1     2    39    60    97    59   100 0.94 HlyD family secretion protein
HlyD_3               PF13437.1    105 sp|O31593|YHBJ_BACSU -            221   6.6e-24   84.2   8.9   2   2   8.6e-21   9.8e-18   64.4   5.8     2   105    96   212    95   212 0.85 HlyD family secretion protein
HlyD_2               PF12700.2    328 sp|O31593|YHBJ_BACSU -            221   1.1e-18   67.4   7.9   1   2   9.9e-07    0.0011   18.1   0.1    20    56    56    93    40    98 0.87 HlyD family secretion protein
HlyD_2               PF12700.2    328 sp|O31593|YHBJ_BACSU -            221   1.1e-18   67.4   7.9   2   2   2.4e-16   2.7e-13   49.7   6.5   160   268    94   220    89   221 0.91 HlyD family secretion protein
HlyD                 PF00529.15   305 sp|O31593|YHBJ_BACSU -            221   1.9e-16   60.3   3.9   1   2   0.00055      0.62    9.3   0.0     1    32    57    88    57    94 0.92 HlyD family secretion protein
HlyD                 PF00529.15   305 sp|O31593|YHBJ_BACSU -            221   1.9e-16   60.3   3.9   2   2   2.6e-16     3e-13   49.7   3.1   171   288    96   204    89   212 0.94 HlyD family secretion protein
Biotin_lipoyl_2      PF13533.1     50 sp|O31593|YHBJ_BACSU -            221   5.6e-11   41.9   1.7   1   2     2e-07   0.00023   20.7   0.0     4    34    59    89    53    93 0.91 Biotin-lipoyl like
Biotin_lipoyl_2      PF13533.1     50 sp|O31593|YHBJ_BACSU -            221   5.6e-11   41.9   1.7   2   2   3.9e-07   0.00045   19.8   0.5     2    32    93   123    91   126 0.94 Biotin-lipoyl like
Biotin_lipoyl        PF00364.17    74 sp|O31593|YHBJ_BACSU -            221   1.6e-08   34.0   2.7   1   1   7.8e-11   8.9e-08   31.6   3.0     3    72    60   122    58   124 0.94 Biotin-requiring enzyme
QRPTase_N            PF02749.11    88 sp|O31593|YHBJ_BACSU -            221    0.0021   17.8   0.4   1   2   0.00012      0.13   12.0   0.1    47    69    69    91    46    96 0.85 Quinolinate phosphoribosyl transferase, N-terminal domain
Peptidase_M23        PF01551.17    96 sp|O31593|YHBJ_BACSU -            221    0.0091   16.0   6.2   2   3    0.0001      0.12   12.4   3.7    14    73    58   125    51   137 0.67 Peptidase family M23
LysM                 PF01476.15    44 sp|O31593|YHBJ_BACSU -            221     0.012   15.4   0.6   1   1   3.7e-05     0.043   13.7   0.6     2    25    78   101    78   151 0.83 LysM domain
AIF-MLS              PF14962.1    180 sp|O31593|YHBJ_BACSU -            221      0.07   12.7   0.3   1   1   8.2e-05     0.094   12.3   0.3    44   165    20   143    19   159 0.76 Mitochondria Localisation Sequence
MFS_1                PF07690.11   352 sp|P54585|YHCA_BACSU -            532   2.5e-56  190.8  46.7   1   2   3.2e-59   1.2e-55  188.6  46.7     2   351    20   410    19   411 0.85 Major Facilitator Superfamily
Sugar_tr             PF00083.19   451 sp|P54585|YHCA_BACSU -            532   7.9e-06   24.7  31.7   1   5   1.6e-06    0.0059   15.2   4.3   255   331    16    94     5    95 0.78 Sugar (and other) transporter
Sugar_tr             PF00083.19   451 sp|P54585|YHCA_BACSU -            532   7.9e-06   24.7  31.7   2   5   4.5e-09   1.7e-05   23.6  19.5    65   191    68   188    28   192 0.82 Sugar (and other) transporter
MFS_2                PF13347.1    428 sp|P54585|YHCA_BACSU -            532    0.0036   15.7  46.7   1   3   3.1e-06     0.012   14.0  14.8   227   339    16   126     9   131 0.93 MFS/sugar transport protein
MFS_2                PF13347.1    428 sp|P54585|YHCA_BACSU -            532    0.0036   15.7  46.7   3   3   1.1e-06    0.0042   15.5   7.6    14   215   279   523   265   531 0.72 MFS/sugar transport protein
MFS_1_like           PF12832.2     77 sp|P54585|YHCA_BACSU -            532     0.009   15.7   5.1   3   3   2.9e-05      0.11   12.3   0.1    24    74   290   341   288   344 0.91 MFS_1 like family
ABC_tran             PF00005.22   137 sp|P54591|YHCG_BACSU -            232   3.8e-25   88.7   0.0   1   1   1.3e-27   7.4e-25   87.8   0.0     2   136    19   153    18   154 0.92 ABC transporter
AAA_21               PF13304.1    303 sp|P54591|YHCG_BACSU -            232   9.5e-13   48.7   0.2   1   2   8.1e-08   4.6e-05   23.5   0.0     3    24    32    53    30    75 0.79 AAA domain
AAA_21               PF13304.1    303 sp|P54591|YHCG_BACSU -            232   9.5e-13   48.7   0.2   2   2   9.1e-08   5.2e-05   23.3   0.0   225   298   114   185    78   190 0.70 AAA domain
AAA_23               PF13476.1    202 sp|P54591|YHCG_BACSU -            232   4.5e-06   27.1   0.1   1   1   1.9e-08   1.1e-05   25.8   0.1    11   115    19   136    10   217 0.52 AAA domain
AAA                  PF00004.24   132 sp|P54591|YHCG_BACSU -            232   2.1e-05   24.7   1.0   1   1   5.7e-07   0.00032   20.8   1.0     3   119    33   193    31   201 0.72 ATPase family associated with various cellular activities (AAA)
AAA_15               PF13175.1    415 sp|P54591|YHCG_BACSU -            232   3.1e-05   23.2   0.1   2   2   4.1e-05     0.023   13.7   0.0   372   410   146   184   138   186 0.86 AAA ATPase domain
AAA_29               PF13555.1     62 sp|P54591|YHCG_BACSU -            232   5.2e-05   22.6   0.2   1   1   1.9e-07   0.00011   21.6   0.2    17    51    23    56    15    63 0.82 P-loop containing region of AAA domain
SMC_N                PF02463.14   220 sp|P54591|YHCG_BACSU -            232   0.00025   20.3   2.9   1   2    0.0003      0.17   11.0   0.2    24    41    28    45    10    54 0.78 RecF/RecN/SMC N terminal domain
SMC_N                PF02463.14   220 sp|P54591|YHCG_BACSU -            232   0.00025   20.3   2.9   2   2    0.0012      0.69    9.1   0.2   118   199   103   184    88   204 0.76 RecF/RecN/SMC N terminal domain
AAA_5                PF07728.9    139 sp|P54591|YHCG_BACSU -            232    0.0029   17.3   0.4   1   2    0.0002      0.11   12.1   0.0     4    43    33    73    32    93 0.81 AAA domain (dynein-related subfamily)
AAA_14               PF13173.1    128 sp|P54591|YHCG_BACSU -            232    0.0037   17.1   0.5   1   1     2e-05     0.012   15.5   0.1     2    83    28   126    27   151 0.59 AAA domain
AAA_22               PF13401.1    131 sp|P54591|YHCG_BACSU -            232    0.0039   17.3   1.2   1   1   7.5e-05     0.043   13.9   1.2     4   127    28   186    24   193 0.49 AAA domain
AAA_33               PF13671.1    143 sp|P54591|YHCG_BACSU -            232    0.0046   16.8   0.0   1   1   1.9e-05     0.011   15.6   0.0     4    39    33    72    31   231 0.69 AAA domain
Arch_ATPase          PF01637.13   234 sp|P54591|YHCG_BACSU -            232    0.0076   15.9   0.2   1   1   3.6e-05     0.021   14.5   0.2     4   160    14   181    12   195 0.60 Archaeal ATPase
AAA_10               PF12846.2    304 sp|P54591|YHCG_BACSU -            232      0.01   15.2   2.7   1   2   0.00024      0.14   11.5   1.5     6    26    33    53    29   119 0.85 AAA-like domain
MutS_V               PF00488.16   235 sp|P54591|YHCG_BACSU -            232     0.011   15.1   0.1   1   1   8.9e-05     0.051   12.9   0.0    30    64    15    49     4    68 0.83 MutS domain V
AAA_17               PF13207.1    121 sp|P54591|YHCG_BACSU -            232     0.012   16.4   0.3   1   1   0.00011     0.062   14.1   0.3     1    25    30    58    30   222 0.77 AAA domain
SbcCD_C              PF13558.1     90 sp|P54591|YHCG_BACSU -            232     0.018   14.9   0.0   1   1   0.00018      0.11   12.4   0.0    63    88   143   168   102   170 0.89 Putative exonuclease SbcCD, C subunit
AAA_2                PF07724.9    171 sp|P54591|YHCG_BACSU -            232     0.018   14.9   0.0   1   1   0.00047      0.27   11.1   0.0     8    76    33   151    30   152 0.81 AAA domain (Cdc48 subfamily)
G-alpha              PF00503.15   389 sp|P54591|YHCG_BACSU -            232     0.019   13.6   0.0   1   1   3.5e-05      0.02   13.5   0.0    63   103    33    77    31   215 0.70 G-protein alpha subunit
AAA_18               PF13238.1    129 sp|P54591|YHCG_BACSU -            232     0.024   14.9   0.7   1   1   0.00053       0.3   11.3   0.7     3    80    33   151    32   226 0.73 AAA domain
Mg_chelatase         PF01078.16   207 sp|P54591|YHCG_BACSU -            232     0.026   13.7   0.0   1   1   7.6e-05     0.043   12.9   0.0     7    84    13    88     7    93 0.75 Magnesium chelatase, subunit ChlI
Miro                 PF08477.8    119 sp|P54591|YHCG_BACSU -            232     0.044   14.2   0.5   1   1   0.00041      0.23   11.9   0.0     4    41    33    78    31   150 0.83 Miro-like protein
Zeta_toxin           PF06414.7    201 sp|P54591|YHCG_BACSU -            232     0.046   12.8   0.0   1   1   0.00013     0.071   12.1   0.0    19    56    31    69    15   131 0.76 Zeta toxin
AAA_30               PF13604.1    196 sp|P54591|YHCG_BACSU -            232     0.071   12.6   0.1   1   1   0.00045      0.26   10.8   0.1    13    40    23    50    15    61 0.80 AAA domain
VirE                 PF05272.6    198 sp|P54591|YHCG_BACSU -            232     0.072   12.5   0.0   1   1   0.00027      0.15   11.4   0.0    56   108    32    84    27   106 0.73 Virulence-associated protein E
DUF258               PF03193.11   161 sp|P54591|YHCG_BACSU -            232     0.077   12.1   0.3   1   1   0.00032      0.18   10.9   0.3    17    59     9    52     1   133 0.70 Protein of unknown function, DUF258
AAA_16               PF13191.1    185 sp|P54591|YHCG_BACSU -            232      0.23   11.4   0.6   1   1   0.00069      0.39   10.6   0.6    22    43    26    47    12   216 0.86 AAA ATPase domain
ABC_tran             PF00005.22   137 sp|P54592|YHCH_BACSU -            305     2e-30  105.9   0.1   1   1   4.8e-33     6e-30  104.3   0.0     2   137    21   161    20   161 0.95 ABC transporter
AAA_21               PF13304.1    303 sp|P54592|YHCH_BACSU -            305   2.8e-15   57.0   0.5   1   2    0.0001      0.13   12.2   0.1     3    25    34    54    32    68 0.83 AAA domain
AAA_21               PF13304.1    303 sp|P54592|YHCH_BACSU -            305   2.8e-15   57.0   0.5   2   2   4.4e-14   5.5e-11   42.9   0.0   160   298    84   192    56   197 0.80 AAA domain
AAA_10               PF12846.2    304 sp|P54592|YHCH_BACSU -            305   7.1e-07   28.9   0.5   1   2   0.00012      0.15   11.4   0.4     6    46    35    77    31    85 0.79 AAA-like domain
AAA_10               PF12846.2    304 sp|P54592|YHCH_BACSU -            305   7.1e-07   28.9   0.5   2   2   5.1e-06    0.0063   15.9   0.0   157   267    89   197    66   210 0.75 AAA-like domain
AAA_15               PF13175.1    415 sp|P54592|YHCH_BACSU -            305   0.00015   20.9   0.6   2   3   1.3e-06    0.0017   17.5   0.0   371   410   152   191   145   192 0.94 AAA ATPase domain
AAA_11               PF13086.1    236 sp|P54592|YHCH_BACSU -            305     0.007   15.9   0.0   1   1     9e-06     0.011   15.3   0.0    17   134    30   188    18   252 0.61 AAA domain
SRP54                PF00448.17   196 sp|P54592|YHCH_BACSU -            305     0.011   15.1   0.1   1   1   1.5e-05     0.019   14.4   0.1     4    41    33    70    30   125 0.69 SRP54-type protein, GTPase domain
AAA_23               PF13476.1    202 sp|P54592|YHCH_BACSU -            305     0.036   14.4   5.9   1   1   8.2e-05       0.1   12.9   5.9    12    40    22    51     5   303 0.81 AAA domain
MRFAP1               PF15155.1    127 sp|P54592|YHCH_BACSU -            305      0.04   14.2   0.0   1   1   6.6e-05     0.081   13.2   0.0    18    67   157   203   145   224 0.84 MORF4 family-associated protein1
AAA_29               PF13555.1     62 sp|P54592|YHCH_BACSU -            305     0.043   13.3   0.1   1   1   6.4e-05     0.078   12.5   0.1    16    40    24    47    18    67 0.83 P-loop containing region of AAA domain
DUF258               PF03193.11   161 sp|P54592|YHCH_BACSU -            305     0.049   12.8   0.0   1   1     7e-05     0.087   12.0   0.0    19    66    13    61     3   102 0.84 Protein of unknown function, DUF258
AAA                  PF00004.24   132 sp|P54592|YHCH_BACSU -            305      0.13   12.4   0.7   1   1   0.00055      0.68   10.1   0.7     3    35    35    69    33   159 0.80 ATPase family associated with various cellular activities (AAA)
AAA_33               PF13671.1    143 sp|P54592|YHCH_BACSU -            305      0.15   11.8   0.1   1   1   0.00025      0.31   10.9   0.1     4    20    35    51    32   199 0.83 AAA domain
Lipoprotein_9        PF03180.9    237 sp|P54594|YHCJ_BACSU -            276   4.8e-72  241.6   0.1   1   1   1.1e-75   5.4e-72  241.5   0.1     1   237    29   261    29   261 0.98 NLPA lipoprotein
Phosphonate-bd       PF12974.2    243 sp|P54594|YHCJ_BACSU -            276     0.065   12.6   0.0   1   1   2.5e-05      0.12   11.6   0.0    24    63    48    87    33   142 0.85 ABC transporter, phosphonate, periplasmic substrate-binding protein
Coat_F               PF07875.7     64 sp|P54601|YHCQ_BACSU -            217   7.2e-22   77.2   0.7   2   2   1.5e-25   7.2e-22   77.2   0.7     1    64   121   184   121   184 0.98 Coat F domain
Ribosomal_L28e       PF01778.12   117 sp|P54601|YHCQ_BACSU -            217     0.033   14.5   0.0   1   1   9.9e-06     0.049   14.0   0.0    20   112    65   157    52   163 0.88 Ribosomal L28e protein family
MIT                  PF04212.13    69 sp|P54601|YHCQ_BACSU -            217      0.06   13.2   0.0   1   1   2.8e-05      0.14   12.0   0.0    28    65   132   170   130   171 0.89 MIT (microtubule interacting and transport) domain
5_nucleotid_C        PF02872.13   156 sp|P54602|YHCR_BACSU -           1217   1.6e-32  112.6   0.7   2   2   1.8e-35   5.2e-32  110.9   0.3     1   149   901  1041   901  1048 0.84 5'-nucleotidase, C-terminal domain
SNase                PF00565.12   108 sp|P54602|YHCR_BACSU -           1217   5.1e-29  100.7   0.1   1   1     5e-32   1.5e-28   99.2   0.1     1   108   402   517   402   517 0.97 Staphylococcal nuclease homologue
Metallophos          PF00149.23   200 sp|P54602|YHCR_BACSU -           1217   2.5e-11   43.3   0.0   1   1   1.3e-14   3.8e-11   42.7   0.0     1   199   590   827   590   828 0.95 Calcineurin-like phosphoesterase
tRNA_anti-codon      PF01336.20    75 sp|P54602|YHCR_BACSU -           1217   9.9e-10   38.1   0.0   2   4   4.4e-09   1.3e-05   24.9   0.0     1    70   186   252   186   258 0.93 OB-fold nucleic acid binding domain
Gram_pos_anchor      PF00746.16    39 sp|P54602|YHCR_BACSU -           1217   2.5e-06   27.1   0.0   1   1     2e-09   5.9e-06   25.9   0.0     2    39  1175  1211  1174  1211 0.95 Gram positive anchor
PseudoU_synth_2      PF00849.17   164 sp|P54604|YHCT_BACSU -            302   3.5e-36  124.5   1.2   1   1   8.1e-40     6e-36  123.7   1.2     1   164    91   244    91   244 0.95 RNA pseudouridylate synthase
S4                   PF01479.20    48 sp|P54604|YHCT_BACSU -            302   8.5e-06   25.1   0.0   1   1   2.4e-09   1.8e-05   24.1   0.0     2    48    20    64    19    64 0.95 S4 domain
HAD_2                PF13419.1    176 sp|P54607|YHCW_BACSU -            220   9.4e-24   84.5   0.0   1   1   4.5e-27   1.3e-23   84.0   0.0     1   176     5   184     5   184 0.82 Haloacid dehalogenase-like hydrolase
Hydrolase            PF00702.21   215 sp|P54607|YHCW_BACSU -            220   1.7e-16   61.2   0.1   1   1   3.8e-18   1.1e-14   55.3   0.1    97   215    56   178     2   178 0.75 haloacid dehalogenase-like hydrolase
Hydrolase_like       PF13242.1     75 sp|P54607|YHCW_BACSU -            220     1e-07   31.5   0.0   1   1   8.1e-11   2.4e-07   30.3   0.0     4    52   141   188   139   205 0.92 HAD-hyrolase-like
CN_hydrolase         PF00795.17   186 sp|P54608|YHCX_BACSU -            513   1.2e-24   86.7   0.0   1   1   7.7e-28   1.9e-24   86.0   0.0    12   184   240   402   230   403 0.86 Carbon-nitrogen hydrolase
Acetyltransf_1       PF00583.19    83 sp|P54608|YHCX_BACSU -            513   6.9e-16   58.0   0.0   1   1   5.7e-19   1.4e-15   57.0   0.0     1    81    60   158    60   160 0.89 Acetyltransferase (GNAT) family
Acetyltransf_9       PF13527.1    127 sp|P54608|YHCX_BACSU -            513   0.00044   20.0   0.0   1   2   0.00032      0.79    9.5   0.0     2    26    16    40    15    75 0.75 Acetyltransferase (GNAT) domain
Acetyltransf_7       PF13508.1     79 sp|P54608|YHCX_BACSU -            513     0.038   14.1   0.4   1   1   5.3e-05      0.13   12.4   0.0     6    62    58   143    55   173 0.70 Acetyltransferase (GNAT) domain
CDC48_N              PF02359.13    87 sp|P54608|YHCX_BACSU -            513       0.1   12.5   0.0   1   1   0.00011      0.26   11.2   0.0    36    81   321   366   314   370 0.85 Cell division protein 48 (CDC48), N-terminal domain
DUF3642              PF12182.3     79 sp|P54608|YHCX_BACSU -            513      0.12   12.8   0.5   1   1   0.00035      0.86   10.0   0.0    14    40    78   104    75   125 0.83 Bacterial lipoprotein
adh_short_C2         PF13561.1    241 sp|O07575|YHDF_BACSU -            289   2.6e-33  115.7   0.0   1   1   1.5e-36   3.3e-33  115.4   0.0     5   239    54   284    51   285 0.93 Enoyl-(Acyl carrier protein) reductase
adh_short            PF00106.20   167 sp|O07575|YHDF_BACSU -            289   7.5e-29  100.7   0.0   1   1   4.4e-32   9.4e-29  100.4   0.0     1   166    46   212    46   213 0.97 short chain dehydrogenase
KR                   PF08659.5    181 sp|O07575|YHDF_BACSU -            289   3.3e-09   36.6   0.0   1   1   2.3e-12   4.9e-09   36.1   0.0     3   175    48   224    47   229 0.81 KR domain
Epimerase            PF01370.16   236 sp|O07575|YHDF_BACSU -            289   0.00032   20.2   0.1   1   1   1.9e-07   0.00041   19.8   0.1     2    95    49   158    48   213 0.76 NAD dependent epimerase/dehydratase family
Eno-Rase_NADH_b      PF12242.3     78 sp|O07575|YHDF_BACSU -            289    0.0039   16.9   0.2   1   1   4.4e-06    0.0093   15.7   0.2    33    67    40    72    32    82 0.77 NAD(P)H binding domain of trans-2-enoyl-CoA reductase
DUF1776              PF08643.5    299 sp|O07575|YHDF_BACSU -            289    0.0049   16.0   0.0   1   1   3.3e-06    0.0069   15.5   0.0   108   195   139   221   113   227 0.79 Fungal family of unknown function (DUF1776)
Arginase             PF00491.16   278 sp|O07575|YHDF_BACSU -            289     0.031   13.5   0.0   1   1   1.9e-05     0.041   13.1   0.0    79   123    44    87    32   169 0.90 Arginase family
AA_permease_2        PF13520.1    426 sp|O07576|YHDG_BACSU -            465   9.3e-66  222.1  51.6   1   1   3.2e-69   1.2e-65  221.7  51.6     1   408    28   439    28   457 0.89 Amino acid permease
AA_permease          PF00324.16   478 sp|O07576|YHDG_BACSU -            465   3.1e-43  147.8  45.5   1   1   1.1e-46   4.2e-43  147.3  45.5     2   436    33   442    32   462 0.88 Amino acid permease
AA_permease_C        PF13906.1     51 sp|O07576|YHDG_BACSU -            465   1.1e-16   60.3   6.5   3   3   3.1e-20   1.1e-16   60.3   6.5     1    51   411   461   411   461 0.99 C-terminus of AA_permease
Spore_permease       PF03845.8    320 sp|O07576|YHDG_BACSU -            465    0.0011   17.7  13.1   2   3   2.9e-07    0.0011   17.7  13.1   113   235   164   283   152   337 0.82 Spore germination protein
SNF                  PF00209.13   523 sp|O07577|YHDH_BACSU -            451   4.6e-49  167.2  38.8   1   2   1.3e-26     1e-22   80.3   9.5     3   117     8   124     7   132 0.94 Sodium:neurotransmitter symporter family
SNF                  PF00209.13   523 sp|O07577|YHDH_BACSU -            451   4.6e-49  167.2  38.8   2   2   2.3e-30   1.7e-26   92.8  21.2   178   478   149   444   134   450 0.75 Sodium:neurotransmitter symporter family
BCCT                 PF02028.12   485 sp|O07577|YHDH_BACSU -            451    0.0098   14.1  26.8   2   4     1e-06    0.0077   14.5   6.6   196   263   126   190   103   203 0.74 BCCT family transporter
BCCT                 PF02028.12   485 sp|O07577|YHDH_BACSU -            451    0.0098   14.1  26.8   3   4     2e-06     0.015   13.6   1.6   376   445   287   356   250   370 0.70 BCCT family transporter
Acetyltransf_1       PF00583.19    83 sp|O07579|YHDJ_BACSU -            142   1.1e-11   44.6   0.0   1   1   3.5e-15   1.7e-11   43.9   0.0    23    83    71   132    44   132 0.88 Acetyltransferase (GNAT) family
Acetyltransf_10      PF13673.1    117 sp|O07579|YHDJ_BACSU -            142     2e-08   34.3   0.0   1   1   4.7e-12   2.3e-08   34.1   0.0    25   117    29   131     6   131 0.80 Acetyltransferase (GNAT) domain
Acetyltransf_7       PF13508.1     79 sp|O07579|YHDJ_BACSU -            142   9.9e-07   28.8   0.0   1   1   2.9e-10   1.4e-06   28.3   0.0     5    77    47   131    43   133 0.83 Acetyltransferase (GNAT) domain
Aminotran_1_2        PF00155.16   363 sp|O07578|YHDI_BACSU -            469   2.8e-17   62.7   0.0   1   1   9.3e-21   3.4e-17   62.4   0.0    19   340   121   431   108   458 0.87 Aminotransferase class I and II
GntR                 PF00392.16    64 sp|O07578|YHDI_BACSU -            469   3.3e-12   45.6   0.0   1   1   1.7e-15   6.5e-12   44.7   0.0     1    63    15    77    15    78 0.98 Bacterial regulatory proteins, gntR family
Fe_dep_repress       PF01325.14    60 sp|O07578|YHDI_BACSU -            469     0.006   16.4   0.0   1   1     3e-06     0.011   15.6   0.0    20    58    36    74    31    76 0.89 Iron dependent repressor, N-terminal DNA binding domain
HTH_11               PF08279.7     55 sp|O07578|YHDI_BACSU -            469     0.071   12.7   0.0   1   1   5.1e-05      0.19   11.4   0.0    20    54    43    76    34    77 0.92 HTH domain
DUF21                PF01595.15   183 sp|O07585|YHDP_BACSU -            444     2e-52  177.1   8.8   1   1   7.9e-56   2.9e-52  176.6   8.8     2   183     5   201     4   201 0.99 Domain of unknown function DUF21
CorC_HlyC            PF03471.12    81 sp|O07585|YHDP_BACSU -            444   9.1e-17   60.6   2.0   1   1   3.9e-20   1.4e-16   59.9   0.6     2    80   355   430   354   431 0.92 Transporter associated domain
CBS                  PF00571.23    57 sp|O07585|YHDP_BACSU -            444   2.6e-15   55.9   2.5   1   2   1.5e-09   5.7e-06   26.0   0.2     1    54   216   272   216   274 0.94 CBS domain
CBS                  PF00571.23    57 sp|O07585|YHDP_BACSU -            444   2.6e-15   55.9   2.5   2   2   1.1e-10   4.1e-07   29.6   0.2     2    56   285   338   284   339 0.93 CBS domain
DUF21                PF01595.15   183 sp|O07589|YHDT_BACSU -            461   6.8e-54  181.9   1.8   1   1   1.9e-57   9.2e-54  181.5   1.8     3   183     7   202     5   202 0.98 Domain of unknown function DUF21
CorC_HlyC            PF03471.12    81 sp|O07589|YHDT_BACSU -            461   6.7e-17   61.0   0.4   1   1   1.4e-20   6.7e-17   61.0   0.4     2    79   358   431   357   433 0.94 Transporter associated domain
CBS                  PF00571.23    57 sp|O07589|YHDT_BACSU -            461   3.7e-13   49.0   1.7   1   2     1e-09   5.2e-06   26.1   0.0     1    53   217   272   217   275 0.92 CBS domain
CBS                  PF00571.23    57 sp|O07589|YHDT_BACSU -            461   3.7e-13   49.0   1.7   2   2   2.3e-08   0.00012   21.8   0.4     4    56   290   341   285   342 0.91 CBS domain
GDPD                 PF03009.12   256 sp|O07592|YHDW_BACSU -            243   1.5e-60  204.8   0.0   1   1   2.3e-64   1.7e-60  204.7   0.0     1   255     6   232     6   233 0.98 Glycerophosphoryl diester phosphodiesterase family
GDPD_2               PF13653.1     30 sp|O07592|YHDW_BACSU -            243   3.3e-09   36.6   1.8   2   2   1.2e-12   9.1e-09   35.2   0.3     3    30   205   232   204   232 0.97 Glycerophosphoryl diester phosphodiesterase family
MS_channel           PF00924.13   206 sp|O07594|YHDY_BACSU -            371   1.6e-64  217.0   5.3   1   1   1.6e-68   2.4e-64  216.4   5.3     2   206   139   341   138   341 0.99 Mechanosensitive ion channel
DUF964               PF06133.6    108 sp|O07542|YHEA_BACSU -            117   4.8e-32  110.2  10.5   1   1   1.4e-35   5.3e-32  110.0  10.5     1   107     4   110     4   111 0.99 Protein of unknown function (DUF964)
Flagellin_N          PF00669.15   139 sp|O07542|YHEA_BACSU -            117     0.063   13.0   4.9   1   1   2.8e-05       0.1   12.3   4.7    62   123    43   104    31   106 0.91 Bacterial flagellin N-terminal helical region
OmpH                 PF03938.9    158 sp|O07542|YHEA_BACSU -            117     0.069   13.0   6.9   1   1   2.1e-05     0.079   12.9   6.9    19   116     3   105     1   113 0.81 Outer membrane protein (OmpH-like)
DUF445               PF04286.7    367 sp|O07543|YHEB_BACSU -            377   8.4e-87  292.0   1.2   1   1   2.6e-90   9.5e-87  291.8   1.2     1   366    12   376    12   377 0.97 Protein of unknown function (DUF445)
ROS_MUCR             PF05443.6    132 sp|O07543|YHEB_BACSU -            377     0.093   12.5   0.0   1   1   9.5e-05      0.35   10.6   0.0    72   130     7    63     2    65 0.91 ROS/MUCR transcriptional regulator protein
ATPgrasp_YheCD       PF14398.1    262 sp|O07544|YHEC_BACSU -            363   2.3e-80  269.1   0.0   1   1   1.5e-83   2.8e-80  268.9   0.0     2   262    91   350    90   350 0.92 YheC/D like ATP-grasp
GSH-S_ATP            PF02955.11   174 sp|O07544|YHEC_BACSU -            363   9.4e-07   28.1   0.0   1   1   8.9e-10   1.6e-06   27.3   0.0    10    75   123   188   116   197 0.90 Prokaryotic glutathione synthetase, ATP-grasp domain
ATP-grasp_3          PF02655.9    161 sp|O07544|YHEC_BACSU -            363   1.8e-05   24.6   0.0   1   2   9.3e-08   0.00017   21.4   0.0     3    56   107   169   105   179 0.85 ATP-grasp domain
ATP-grasp_4          PF13535.1    184 sp|O07544|YHEC_BACSU -            363     2e-05   24.4   0.0   1   2   6.6e-07    0.0012   18.5   0.0    12    88   115   209   105   229 0.73 ATP-grasp domain
ATPgrasp_Ter         PF15632.1    330 sp|O07544|YHEC_BACSU -            363   4.6e-05   22.3   0.0   1   1   4.7e-08   8.7e-05   21.4   0.0   106   207   106   210   100   215 0.78 ATP-grasp in the biosynthetic pathway with Ter operon
ATPgrasp_TupA        PF14305.1    239 sp|O07544|YHEC_BACSU -            363    0.0028   16.9   0.2   1   1   2.4e-06    0.0044   16.3   0.2    18   132   105   224    88   230 0.72 TupA-like ATPgrasp
TTL                  PF03133.10   294 sp|O07544|YHEC_BACSU -            363     0.004   16.1   0.5   2   2   0.00022      0.41    9.5   0.0   240   286   301   348   269   356 0.84 Tubulin-tyrosine ligase family
ATPgrasp_ST          PF14397.1    285 sp|O07544|YHEC_BACSU -            363    0.0057   15.7   0.0   1   2   0.00013      0.25   10.4   0.0    49    98   121   174    89   210 0.71 Sugar-transfer associated ATP-grasp
ATPgrasp_YheCD       PF14398.1    262 sp|O07545|YHED_BACSU -            453  4.6e-100  333.7   0.0   1   1  1.9e-103  5.7e-100  333.4   0.0     2   262   179   440   178   440 0.99 YheC/D like ATP-grasp
ATPgrasp_ST          PF14397.1    285 sp|O07545|YHED_BACSU -            453   0.00053   19.1   0.0   1   2   0.00013      0.39    9.7   0.0    60   176   221   346   173   357 0.68 Sugar-transfer associated ATP-grasp
ATP-grasp_4          PF13535.1    184 sp|O07545|YHED_BACSU -            453    0.0025   17.5   0.0   1   1   3.7e-06     0.011   15.4   0.0     4   181   195   413   192   415 0.64 ATP-grasp domain
TTL                  PF03133.10   294 sp|O07545|YHED_BACSU -            453    0.0044   15.9   0.0   2   2   1.5e-05     0.046   12.6   0.0   215   261   365   411   341   426 0.82 Tubulin-tyrosine ligase family
ATPgrasp_Ter         PF15632.1    330 sp|O07545|YHED_BACSU -            453     0.013   14.2   0.0   1   2   9.3e-05      0.28    9.9   0.0   105   185   193   272   188   297 0.69 ATP-grasp in the biosynthetic pathway with Ter operon
ABC_membrane         PF00664.18   275 sp|O07549|YHEH_BACSU -            673   6.2e-33  114.3  12.3   1   1     1e-35   9.3e-33  113.8  11.5    44   273   153   384   126   386 0.91 ABC transporter transmembrane region
ABC_tran             PF00005.22   137 sp|O07549|YHEH_BACSU -            673   6.3e-32  110.7   0.0   1   1     2e-34   1.9e-31  109.1   0.0     1   137   446   595   446   595 0.90 ABC transporter
SMC_N                PF02463.14   220 sp|O07549|YHEH_BACSU -            673   2.6e-09   36.6   0.2   2   2   5.7e-09   5.3e-06   25.8   0.0   109   210   522   636   495   643 0.92 RecF/RecN/SMC N terminal domain
AAA_16               PF13191.1    185 sp|O07549|YHEH_BACSU -            673   2.3e-06   27.7   0.1   1   1   6.4e-09     6e-06   26.3   0.1    13   179   446   614   440   621 0.65 AAA ATPase domain
AAA_21               PF13304.1    303 sp|O07549|YHEH_BACSU -            673     3e-05   24.1   4.0   1   2    0.0003      0.28   11.1   0.2     3    30   460   497   458   538 0.69 AAA domain
AAA_21               PF13304.1    303 sp|O07549|YHEH_BACSU -            673     3e-05   24.1   4.0   2   2   3.5e-05     0.033   14.1   0.1   200   274   565   601   522   622 0.72 AAA domain
DUF258               PF03193.11   161 sp|O07549|YHEH_BACSU -            673    0.0002   20.5   0.0   1   1   4.5e-07   0.00041   19.5   0.0    20    66   440   487   424   500 0.82 Protein of unknown function, DUF258
AAA_29               PF13555.1     62 sp|O07549|YHEH_BACSU -            673    0.0024   17.3   0.1   1   1   6.2e-06    0.0058   16.1   0.1    20    40   453   473   444   478 0.85 P-loop containing region of AAA domain
AAA_23               PF13476.1    202 sp|O07549|YHEH_BACSU -            673    0.0038   17.5   0.1   1   1   4.7e-05     0.043   14.1   0.0    13    37   447   474   437   477 0.82 AAA domain
MMR_HSR1             PF01926.18   116 sp|O07549|YHEH_BACSU -            673    0.0094   15.9   0.1   1   1     3e-05     0.028   14.3   0.1     2    21   459   478   458   624 0.87 50S ribosome-binding GTPase
AAA_22               PF13401.1    131 sp|O07549|YHEH_BACSU -            673     0.019   15.1   0.1   1   1   0.00026      0.24   11.5   0.1     5    37   457   516   453   629 0.47 AAA domain
AAA_30               PF13604.1    196 sp|O07549|YHEH_BACSU -            673     0.035   13.6   0.1   1   1   0.00016      0.15   11.6   0.0    14    67   452   507   443   620 0.66 AAA domain
AAA_10               PF12846.2    304 sp|O07549|YHEH_BACSU -            673     0.039   13.4   0.1   1   2   0.00039      0.36   10.2   0.0     4    34   459   489   456   495 0.90 AAA-like domain
SbcCD_C              PF13558.1     90 sp|O07549|YHEH_BACSU -            673      0.06   13.2   0.4   1   1   0.00097       0.9    9.4   0.4    28    86   562   607   550   613 0.74 Putative exonuclease SbcCD, C subunit
AAA_17               PF13207.1    121 sp|O07549|YHEH_BACSU -            673     0.087   13.6   0.3   1   1   0.00043       0.4   11.5   0.1     2    23   459   480   458   610 0.77 AAA domain
FtsK_SpoIIIE         PF01580.13   205 sp|O07549|YHEH_BACSU -            673      0.09   12.2   0.1   1   1   0.00023      0.22   10.9   0.0    28    58   446   476   433   575 0.83 FtsK/SpoIIIE family
Dynamin_N            PF00350.18   168 sp|O07549|YHEH_BACSU -            673      0.14   11.9   0.1   1   1   0.00015      0.14   11.9   0.1     1    19   459   477   459   480 0.91 Dynamin family
ABC_membrane         PF00664.18   275 sp|O07550|YHEI_BACSU -            585   4.3e-43  147.6  12.3   1   1   1.1e-45   5.6e-43  147.3  12.3     2   274    20   291    19   292 0.95 ABC transporter transmembrane region
ABC_tran             PF00005.22   137 sp|O07550|YHEI_BACSU -            585     3e-34  118.2   0.0   1   1   9.6e-37   4.9e-34  117.5   0.0     1   135   354   501   354   503 0.91 ABC transporter
SMC_N                PF02463.14   220 sp|O07550|YHEI_BACSU -            585   2.4e-06   26.9   0.8   2   2   2.3e-07   0.00012   21.4   0.1   110   208   431   542   421   550 0.89 RecF/RecN/SMC N terminal domain
ATP-synt_ab          PF00006.20   215 sp|O07550|YHEI_BACSU -            585   0.00042   19.8   0.0   1   1   1.2e-06    0.0006   19.3   0.0     7    38   356   387   350   555 0.90 ATP synthase alpha/beta family, nucleotide-binding domain
AAA_16               PF13191.1    185 sp|O07550|YHEI_BACSU -            585   0.00098   19.1   0.0   1   1     3e-06    0.0015   18.5   0.0    24   158   364   500   352   561 0.66 AAA ATPase domain
DUF258               PF03193.11   161 sp|O07550|YHEI_BACSU -            585    0.0016   17.6   0.0   1   1   5.9e-06     0.003   16.7   0.0    19    59   347   388   337   473 0.84 Protein of unknown function, DUF258
AAA_17               PF13207.1    121 sp|O07550|YHEI_BACSU -            585    0.0027   18.5   0.0   1   1   1.3e-05    0.0065   17.2   0.0     2    39   367   413   366   525 0.67 AAA domain
AAA_18               PF13238.1    129 sp|O07550|YHEI_BACSU -            585    0.0033   17.7   0.0   1   1   1.8e-05     0.009   16.3   0.0     1    42   367   434   367   503 0.67 AAA domain
T2SE                 PF00437.15   272 sp|O07550|YHEI_BACSU -            585    0.0041   16.0   0.0   1   1   1.3e-05    0.0064   15.4   0.0   121   155   357   391   276   397 0.79 Type II/IV secretion system protein
NB-ARC               PF00931.17   287 sp|O07550|YHEI_BACSU -            585    0.0045   15.8   0.1   1   2   0.00019     0.099   11.4   0.1    20    41   365   386   352   391 0.88 NB-ARC domain
AAA_25               PF13481.1    194 sp|O07550|YHEI_BACSU -            585    0.0065   15.8   0.7   2   2   0.00042      0.22   10.9   0.4    31    56   362   387   351   531 0.92 AAA domain
Miro                 PF08477.8    119 sp|O07550|YHEI_BACSU -            585    0.0085   16.5   0.0   1   1     6e-05     0.031   14.7   0.0     2    25   367   390   366   409 0.83 Miro-like protein
AAA_29               PF13555.1     62 sp|O07550|YHEI_BACSU -            585    0.0088   15.5   0.3   1   1   6.2e-05     0.032   13.7   0.1    18    40   360   381   350   390 0.81 P-loop containing region of AAA domain
AAA_23               PF13476.1    202 sp|O07550|YHEI_BACSU -            585     0.011   16.0   0.6   1   1   5.9e-05      0.03   14.6   0.4    13    37   355   382   346   384 0.83 AAA domain
MobB                 PF03205.9    140 sp|O07550|YHEI_BACSU -            585     0.017   14.8   0.1   1   1   8.7e-05     0.044   13.4   0.1     2    23   366   387   365   389 0.91 Molybdopterin guanine dinucleotide synthesis protein B
AAA_22               PF13401.1    131 sp|O07550|YHEI_BACSU -            585     0.023   14.8   0.2   1   1   9.4e-05     0.048   13.7   0.2     9    29   369   389   361   530 0.88 AAA domain
Zeta_toxin           PF06414.7    201 sp|O07550|YHEI_BACSU -            585     0.047   12.7   0.0   1   1   0.00018     0.092   11.8   0.0    18    46   366   395   351   440 0.86 Zeta toxin
G-alpha              PF00503.15   389 sp|O07550|YHEI_BACSU -            585     0.076   11.6   0.0   1   1    0.0002       0.1   11.2   0.0    63    88   369   418   350   532 0.73 G-protein alpha subunit
TrwB_AAD_bind        PF10412.4    386 sp|O07550|YHEI_BACSU -            585     0.076   11.6   0.1   1   1   0.00028      0.14   10.7   0.1    16    38   365   387   354   393 0.88 Type IV secretion-system coupling protein DNA-binding domain
MMR_HSR1             PF01926.18   116 sp|O07550|YHEI_BACSU -            585     0.083   12.8   0.2   1   1    0.0007      0.36   10.8   0.1     2    21   367   386   366   400 0.88 50S ribosome-binding GTPase
DUF87                PF01935.12   229 sp|O07550|YHEI_BACSU -            585     0.085   12.6   0.1   1   1   0.00035      0.18   11.6   0.1    26    46   367   387   355   389 0.91 Domain of unknown function DUF87
cobW                 PF02492.14   178 sp|O07550|YHEI_BACSU -            585       0.1   12.0   0.1   1   1   0.00043      0.22   10.9   0.1     3    22   367   386   365   393 0.86 CobW/HypB/UreG, nucleotide-binding domain
UPF0079              PF02367.12   123 sp|O07550|YHEI_BACSU -            585      0.11   12.0   0.0   1   1   0.00046      0.24   11.0   0.0    11    39   360   388   351   398 0.85 Uncharacterised P-loop hydrolase UPF0079
FtsK_SpoIIIE         PF01580.13   205 sp|O07550|YHEI_BACSU -            585      0.13   11.6   0.1   1   1   0.00066      0.34   10.3   0.1    35    60   361   386   345   391 0.82 FtsK/SpoIIIE family
AAA_14               PF13173.1    128 sp|O07550|YHEI_BACSU -            585      0.14   12.0   0.2   1   1    0.0012       0.6   10.0   0.1     3    27   365   389   363   411 0.82 AAA domain
Viral_helicase1      PF01443.13   234 sp|O07550|YHEI_BACSU -            585      0.14   11.6   0.0   1   1   0.00062      0.32   10.4   0.0     3    21   369   387   367   411 0.91 Viral (Superfamily 1) RNA helicase
Polysacc_deac_1      PF01522.16   124 sp|O07596|YHEN_BACSU -            282   5.9e-29  100.2   0.0   1   1   2.9e-32   1.1e-28   99.3   0.0     2   123    80   205    79   206 0.89 Polysaccharide deacetylase
DUF2681              PF10883.3     87 sp|O07596|YHEN_BACSU -            282     0.031   14.4   0.0   1   1     3e-05      0.11   12.6   0.0     8    67    25    87    19    93 0.70 Protein of unknown function (DUF2681)
DUF2334              PF10096.4    243 sp|O07596|YHEN_BACSU -            282     0.037   13.4   0.2   1   1   2.4e-05     0.089   12.2   0.1    54    85   122   156   107   182 0.80 Uncharacterized protein conserved in bacteria (DUF2334)
TFIID_90kDa          PF04494.10   143 sp|O07596|YHEN_BACSU -            282     0.053   13.5   0.1   1   1   2.9e-05      0.11   12.5   0.1    97   134    50    87    38    91 0.85 WD40 associated region in TFIID subunit
Peptidase_M42        PF05343.9    292 sp|O07603|YHFE_BACSU -            346   2.9e-90  302.0   0.3   1   1   6.7e-94   3.3e-90  301.7   0.3     1   292    48   336    48   336 0.99 M42 glutamyl aminopeptidase
Peptidase_M20        PF01546.23   189 sp|O07603|YHFE_BACSU -            346   2.5e-08   33.6   0.1   1   1   8.7e-12   4.3e-08   32.8   0.0    25   188   175   342   153   343 0.79 Peptidase family M20/M25/M40
N_Asn_amidohyd       PF14736.1    274 sp|O07603|YHFE_BACSU -            346       0.1   11.4   0.0   1   1   6.6e-05      0.33    9.7   0.0    73   137    67   221    41   232 0.64 Protein N-terminal asparagine amidohydrolase
Lactamase_B_2        PF12706.2    194 sp|O07607|YHFI_BACSU -            244   1.1e-23   83.8   0.4   1   1   3.4e-27   1.3e-23   83.6   0.4     2   193    30   211    29   212 0.80 Beta-lactamase superfamily domain
Lactamase_B          PF00753.22   194 sp|O07607|YHFI_BACSU -            244   4.9e-16   58.9   1.6   1   1   1.7e-19   6.3e-16   58.6   1.6     6   159    19   181    16   228 0.90 Metallo-beta-lactamase superfamily
Lactamase_B_3        PF13483.1    163 sp|O07607|YHFI_BACSU -            244   0.00051   19.7   0.2   1   1     4e-07    0.0015   18.2   0.2     9   116    21   158    18   228 0.63 Beta-lactamase superfamily domain
Sortase              PF04203.8    128 sp|O07607|YHFI_BACSU -            244     0.049   13.2   0.5   1   1   2.3e-05     0.087   12.4   0.5     2    65    46   110    46   185 0.80 Sortase family
NAD_binding_10       PF13460.1    183 sp|O07609|YHFK_BACSU -            214   9.7e-31  107.1   0.5   1   1   8.4e-34   1.1e-30  106.9   0.5     2   182     4   189     3   190 0.90 NADH(P)-binding
NmrA                 PF05368.8    233 sp|O07609|YHFK_BACSU -            214   1.5e-18   66.9   0.2   1   1   1.1e-20   1.5e-17   63.6   0.2     2   144     4   154     3   202 0.82 NmrA-like family
Epimerase            PF01370.16   236 sp|O07609|YHFK_BACSU -            214   4.9e-12   45.7   0.2   1   2   1.3e-14   1.8e-11   43.9   0.1     2   164     4   149     3   163 0.88 NAD dependent epimerase/dehydratase family
3Beta_HSD            PF01073.14   280 sp|O07609|YHFK_BACSU -            214   6.7e-09   34.8   0.0   1   1   7.2e-12   9.7e-09   34.3   0.0     2   119     5   116     4   126 0.83 3-beta hydroxysteroid dehydrogenase/isomerase family
Semialdhyde_dh       PF01118.19   121 sp|O07609|YHFK_BACSU -            214   3.7e-07   30.4   0.1   1   1   4.6e-10   6.2e-07   29.7   0.1     1    86     2    86     2   142 0.82 Semialdehyde dehydrogenase, NAD binding domain
NAD_binding_4        PF07993.7    249 sp|O07609|YHFK_BACSU -            214     3e-06   26.3   0.0   2   2     2e-05     0.026   13.4   0.0    77   217    56   174    46   205 0.71 Male sterility protein
DapB_N               PF01113.15   124 sp|O07609|YHFK_BACSU -            214     6e-06   26.1   0.1   1   2   2.3e-08   3.1e-05   23.8   0.0     1    71     1    70     1    77 0.73 Dihydrodipicolinate reductase, N-terminus
Ldh_1_N              PF00056.18   141 sp|O07609|YHFK_BACSU -            214    0.0014   18.5   0.6   1   2   7.1e-06    0.0096   15.7   0.3     1    92     1    89     1   112 0.78 lactate/malate dehydrogenase, NAD binding domain
RmlD_sub_bind        PF04321.12   287 sp|O07609|YHFK_BACSU -            214     0.012   14.5   0.3   1   2   3.4e-05     0.046   12.6   0.1     1    38     1    39     1    65 0.75 RmlD substrate binding domain
Peptidase_M48        PF01435.13   226 sp|P40769|YHFN_BACSU -            426   7.2e-51  172.9   0.0   1   1     2e-54   9.7e-51  172.4   0.0     2   226   182   411   181   411 0.98 Peptidase family M48
Peptidase_M56        PF05569.6    299 sp|P40769|YHFN_BACSU -            426    0.0052   15.7   5.8   1   2   0.00018       0.9    8.4   2.9     3    56   147   198   145   250 0.61 BlaR1 peptidase M56
Acetyltransf_1       PF00583.19    83 sp|O07614|YHFO_BACSU -            149   5.7e-17   61.5   0.0   1   1   5.8e-20   9.5e-17   60.8   0.0     1    83    52   134    52   134 0.96 Acetyltransferase (GNAT) family
Acetyltransf_10      PF13673.1    117 sp|O07614|YHFO_BACSU -            149   1.5e-14   54.1   0.1   1   1   1.1e-17   1.7e-14   53.8   0.1     1   117    10   133    10   133 0.87 Acetyltransferase (GNAT) domain
Acetyltransf_7       PF13508.1     79 sp|O07614|YHFO_BACSU -            149   4.7e-12   45.8   0.0   1   1   4.4e-15   7.3e-12   45.2   0.0     3    79    47   135    45   135 0.79 Acetyltransferase (GNAT) domain
Acetyltransf_8       PF13523.1    152 sp|O07614|YHFO_BACSU -            149   1.2e-09   38.2   0.0   1   1   8.9e-13   1.5e-09   37.9   0.0     1   140     3   137     3   142 0.88 Acetyltransferase (GNAT) domain
Acetyltransf_4       PF13420.1    155 sp|O07614|YHFO_BACSU -            149   3.6e-08   33.5   0.0   1   1   2.5e-11   4.2e-08   33.2   0.0     1   141     3   141     3   146 0.84 Acetyltransferase (GNAT) domain
Acetyltransf_3       PF13302.1    142 sp|O07614|YHFO_BACSU -            149   6.9e-08   32.7   0.0   1   1   4.9e-11   8.1e-08   32.5   0.0     4   141     3   133     1   134 0.82 Acetyltransferase (GNAT) domain
Acetyltransf_9       PF13527.1    127 sp|O07614|YHFO_BACSU -            149   7.3e-06   25.8   0.0   1   1   5.7e-09   9.5e-06   25.4   0.0     2   125     3   134     2   135 0.81 Acetyltransferase (GNAT) domain
FR47                 PF08445.5     86 sp|O07614|YHFO_BACSU -            149   0.00081   19.0   0.0   1   1   1.5e-06    0.0025   17.5   0.0    24    80    79   136    71   142 0.86 FR47-like protein
Acetyltransf_CG      PF14542.1     78 sp|O07614|YHFO_BACSU -            149    0.0025   17.6   0.0   1   1   3.2e-06    0.0052   16.6   0.0    18    58    70   112    49   115 0.77 GCN5-related N-acetyl-transferase
ADH_zinc_N           PF00107.21   130 sp|O07615|YHFP_BACSU -            330   2.8e-16   59.2   0.1   1   1   2.8e-19   5.3e-16   58.3   0.1     1   117   162   275   162   289 0.91 Zinc-binding dehydrogenase
ADH_N                PF08240.7    109 sp|O07615|YHFP_BACSU -            330   1.1e-07   31.5   0.0   1   2   9.6e-09   1.8e-05   24.4   0.0     2    61    32    89    31    93 0.90 Alcohol dehydrogenase GroES-like domain
ADH_zinc_N_2         PF13602.1    127 sp|O07615|YHFP_BACSU -            330   8.5e-06   26.6   0.1   1   1   1.4e-08   2.7e-05   25.0   0.0     1   127   194   328   194   328 0.73 Zinc-binding dehydrogenase
adh_short            PF00106.20   167 sp|O07615|YHFP_BACSU -            330   0.00045   20.1   0.3   1   1   4.6e-07   0.00086   19.2   0.3     1    61   152   205   152   238 0.79 short chain dehydrogenase
NmrA                 PF05368.8    233 sp|O07615|YHFP_BACSU -            330     0.002   17.4   0.2   1   1   1.6e-06    0.0029   16.8   0.2     1    54   154   207   154   222 0.84 NmrA-like family
NAD_binding_10       PF13460.1    183 sp|O07615|YHFP_BACSU -            330    0.0028   17.6   0.1   1   1   2.6e-06    0.0048   16.9   0.1     1    38   154   193   154   238 0.81 NADH(P)-binding
Epimerase            PF01370.16   236 sp|O07615|YHFP_BACSU -            330     0.006   16.0   0.9   2   2   5.7e-06     0.011   15.2   0.1     1    35   154   188   154   211 0.80 NAD dependent epimerase/dehydratase family
KR                   PF08659.5    181 sp|O07615|YHFP_BACSU -            330     0.013   15.1   0.2   1   1   1.2e-05     0.022   14.4   0.2     1    37   152   188   152   236 0.81 KR domain
Peripla_BP_2         PF01497.13   238 sp|C0SP94|YHFQ_BACSU -            323     5e-39  133.8   0.8   1   1   9.6e-43   7.1e-39  133.3   0.8     1   235    52   294    52   296 0.91 Periplasmic binding protein
Thiolase_N           PF00108.18   264 sp|O07618|YHFS_BACSU -            364   6.5e-54  182.6   0.1   1   1     4e-56     2e-52  177.7   0.1     3   264     2   232     1   232 0.91 Thiolase, N-terminal domain
Thiolase_C           PF02803.13   123 sp|O07618|YHFS_BACSU -            364     1e-31  108.9   0.0   1   1   3.7e-35   1.8e-31  108.1   0.0     2   122   240   361   239   362 0.94 Thiolase, C-terminal domain
ketoacyl-synt        PF00109.21   254 sp|O07618|YHFS_BACSU -            364   0.00045   19.7   3.8   1   2   1.8e-07    0.0009   18.7   0.3   166   206    72   112    54   127 0.88 Beta-ketoacyl synthase, N-terminal domain
AMP-binding          PF00501.23   417 sp|O07619|YHFT_BACSU -            479   3.3e-70  236.5   0.0   1   1     8e-74     4e-70  236.3   0.0     4   416    10   382     7   383 0.84 AMP-binding enzyme
AMP-binding_C        PF13193.1     73 sp|O07619|YHFT_BACSU -            479     3e-18   66.5   0.0   1   1   1.3e-21   6.3e-18   65.4   0.0     1    73   391   462   391   462 0.91 AMP-binding enzyme C-terminal domain
AMP-binding_C_2      PF14535.1     96 sp|O07619|YHFT_BACSU -            479     0.025   14.6   0.0   1   1   1.5e-05     0.075   13.0   0.0     1    21   384   404   384   438 0.91 AMP-binding enzyme C-terminal domain
SSF                  PF00474.12   406 sp|O07556|YHJB_BACSU -            489     6e-24   84.4  27.3   1   1   6.8e-28     1e-23   83.6  27.3     3   406    35   428    33   428 0.84 Sodium:solute symporter family
FAD_binding_3        PF01494.14   356 sp|O07561|YHJG_BACSU -            499  8.6e-101  337.5   0.0   1   1  5.1e-104  1.1e-100  337.2   0.0     2   355     5   339     4   340 0.95 FAD binding domain
Pyr_redox            PF00070.22    80 sp|O07561|YHJG_BACSU -            499   1.2e-05   25.6   0.2   1   2   1.1e-06    0.0024   18.2   0.1     2    36     7    41     6    71 0.85 Pyridine nucleotide-disulphide oxidoreductase
DAO                  PF01266.19   358 sp|O07561|YHJG_BACSU -            499   3.7e-05   22.8   1.1   1   2     3e-05     0.064   12.1   0.2     2    30     7    35     6    41 0.94 FAD dependent oxidoreductase
DAO                  PF01266.19   358 sp|O07561|YHJG_BACSU -            499   3.7e-05   22.8   1.1   2   2   0.00021      0.43    9.4   0.0   153   256   108   212    99   275 0.68 FAD dependent oxidoreductase
HI0933_like          PF03486.9    409 sp|O07561|YHJG_BACSU -            499    0.0067   14.9   0.1   1   1   5.1e-06     0.011   14.2   0.1     2    34     6    38     5    43 0.92 HI0933-like protein
Pyr_redox_2          PF07992.9    201 sp|O07561|YHJG_BACSU -            499     0.016   15.1   0.3   1   1   2.4e-05     0.052   13.4   0.3     3    34     8    39     6   288 0.73 Pyridine nucleotide-disulphide oxidoreductase
Trp_halogenase       PF04820.9    454 sp|O07561|YHJG_BACSU -            499     0.018   13.6   0.1   1   2   9.8e-05      0.21   10.1   0.1     3    34     8    39     6    44 0.90 Tryptophan halogenase
DUF3656              PF12392.3    122 sp|O07561|YHJG_BACSU -            499     0.032   14.2   0.0   1   1   0.00012      0.25   11.4   0.0    38    86   207   254   193   259 0.85 Collagenase
AmoA                 PF05145.7    318 sp|O07568|YHJN_BACSU -            384  8.4e-122  406.1  37.0   1   1  1.3e-125  9.8e-122  405.9  37.0     1   318    33   370    33   370 0.99 Putative ammonia monooxygenase
MFS_1                PF07690.11   352 sp|O07569|YHJO_BACSU -            401   1.6e-40  138.8  32.3   1   2   7.1e-29   3.5e-25   88.4  17.8     2   255    20   258    19   262 0.88 Major Facilitator Superfamily
MFS_1                PF07690.11   352 sp|O07569|YHJO_BACSU -            401   1.6e-40  138.8  32.3   2   2   7.1e-19   3.5e-15   55.5   9.7    37   180   248   393   237   400 0.83 Major Facilitator Superfamily
MFS_3                PF05977.8    524 sp|O07569|YHJO_BACSU -            401   5.8e-12   44.5  12.9   1   2   1.6e-10   7.8e-07   27.5   3.4    36   188    41   188    13   208 0.75 Transmembrane secretion effector
MFS_3                PF05977.8    524 sp|O07569|YHJO_BACSU -            401   5.8e-12   44.5  12.9   2   2   6.4e-09   3.2e-05   22.2   2.1    76   183   278   380   245   397 0.79 Transmembrane secretion effector
ATG22                PF11700.3    477 sp|O07569|YHJO_BACSU -            401    0.0014   17.1  28.9   2   2   8.2e-07    0.0041   15.6  12.9   283   467   213   387   202   394 0.76 Vacuole effluxer Atg22 like
SBP_bac_5            PF00496.17   374 sp|O07570|YHJP_BACSU -            575     3e-45  154.6   0.0   1   1     5e-48   1.9e-44  152.0   0.0     1   333   176   455   176   487 0.85 Bacterial extracellular solute-binding proteins, family 5 Middle
SgrR_N               PF12793.2    115 sp|O07570|YHJP_BACSU -            575   4.9e-24   84.5   0.3   1   1   3.8e-27   1.4e-23   83.0   0.3     2   101     3   105     2   116 0.91 Sugar transport-related sRNA regulator N-term
Mac                  PF12464.3     55 sp|O07570|YHJP_BACSU -            575       0.1   12.6   0.0   1   1   7.2e-05      0.27   11.2   0.0    23    53    92   122    88   124 0.92 Maltose acetyltransferase
MarR                 PF01047.17    59 sp|O07570|YHJP_BACSU -            575      0.13   11.9   0.0   1   1   9.6e-05      0.36   10.5   0.0    14    50    20    56    18    63 0.94 MarR family
Aminotran_3          PF00202.16   339 sp|P33189|YHXA_BACSU -            450  7.9e-100  333.9   0.0   1   1  1.3e-103     1e-99  333.6   0.0     2   339    38   382    37   382 0.96 Aminotransferase class-III
Beta_elim_lyase      PF01212.16   290 sp|P33189|YHXA_BACSU -            450     0.013   14.6   0.0   1   1   4.4e-06     0.033   13.3   0.0    33   164    98   254    92   255 0.71 Beta-eliminating lyase
adh_short_C2         PF13561.1    241 sp|P40397|YHXC_BACSU -            285   6.2e-31  107.9   0.0   1   1     5e-34   7.4e-31  107.7   0.0     5   239    50   280    47   282 0.95 Enoyl-(Acyl carrier protein) reductase
adh_short            PF00106.20   167 sp|P40397|YHXC_BACSU -            285   2.1e-29  102.5   0.1   1   1   1.8e-32   2.6e-29  102.2   0.1     1   164    42   206    42   209 0.97 short chain dehydrogenase
KR                   PF08659.5    181 sp|P40397|YHXC_BACSU -            285   7.4e-11   42.0   0.0   1   1     7e-14     1e-10   41.5   0.0     2   176    43   221    43   225 0.85 KR domain
Epimerase            PF01370.16   236 sp|P40397|YHXC_BACSU -            285   2.3e-05   23.9   0.1   1   1     2e-08     3e-05   23.5   0.1     2    84    45   138    44   207 0.83 NAD dependent epimerase/dehydratase family
DUF1776              PF08643.5    299 sp|P40397|YHXC_BACSU -            285   4.8e-05   22.6   0.1   1   1   4.9e-08   7.2e-05   22.0   0.1   108   196   135   218   129   243 0.90 Fungal family of unknown function (DUF1776)
Eno-Rase_NADH_b      PF12242.3     78 sp|P40397|YHXC_BACSU -            285    0.0029   17.3   0.3   1   1   4.9e-06    0.0072   16.0   0.0    31    76    34    77    28    98 0.86 NAD(P)H binding domain of trans-2-enoyl-CoA reductase
Polysacc_synt_2      PF02719.10   294 sp|P40397|YHXC_BACSU -            285    0.0041   16.0   0.3   1   1   3.6e-06    0.0053   15.6   0.3     2   114    45   161    44   176 0.73 Polysaccharide biosynthesis protein
2-Hacid_dh_C         PF02826.14   178 sp|P40397|YHXC_BACSU -            285     0.011   14.9   0.0   1   2   0.00021      0.31   10.1   0.0    27    84    32    90     9   100 0.76 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain
THF_DHG_CYH_C        PF02882.14   161 sp|P40397|YHXC_BACSU -            285     0.015   14.3   0.0   1   1   2.1e-05     0.032   13.3   0.0    31    77    36    82    32   132 0.85 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain
MoCo_carrier         PF12694.2    145 sp|P40397|YHXC_BACSU -            285      0.11   11.8   0.0   1   1   0.00015      0.23   10.9   0.0    67   124    43    99    38   117 0.85 Putative molybdenum carrier
adh_short            PF00106.20   167 sp|P40398|YHXD_BACSU -            299   3.4e-25   88.8   0.0   1   1   1.5e-28   4.3e-25   88.5   0.0     3   166    54   219    52   220 0.95 short chain dehydrogenase
adh_short_C2         PF13561.1    241 sp|P40398|YHXD_BACSU -            299   3.6e-25   89.1   0.0   1   1   1.5e-28   4.5e-25   88.8   0.0     5   239    60   295    57   297 0.88 Enoyl-(Acyl carrier protein) reductase
KR                   PF08659.5    181 sp|P40398|YHXD_BACSU -            299   8.3e-07   28.8   0.0   1   1   3.8e-10   1.1e-06   28.4   0.0     4   174    55   230    53   236 0.80 KR domain
Eno-Rase_NADH_b      PF12242.3     78 sp|P40398|YHXD_BACSU -            299   0.00013   21.6   1.6   1   2     1e-07    0.0003   20.5   0.9    31    66    44    77    21    90 0.75 NAD(P)H binding domain of trans-2-enoyl-CoA reductase
Epimerase            PF01370.16   236 sp|P40398|YHXD_BACSU -            299     0.002   17.6   0.0   1   1   9.8e-07    0.0029   17.0   0.0     1    97    54   163    54   226 0.84 NAD dependent epimerase/dehydratase family
Tiny_TM_bacill       PF09680.5     24 sp|C0H3Y2|YHZE_BACSU -             28   2.8e-14   52.2   8.2   1   1   2.1e-18   3.1e-14   52.0   8.2     1    24     4    27     4    27 0.97 Protein of unknown function (Tiny_TM_bacill)
Haemolytic           PF01809.13    68 sp|O34601|YIDD_BACSU -             75   6.2e-36  121.8   0.1   1   1   4.6e-40   6.9e-36  121.6   0.1     1    68     1    68     1    68 0.99 Haemolytic domain
SpoOE-like           PF09388.5     45 sp|O06722|YISI_BACSU -             56   1.3e-14   53.3   2.7   1   1   1.1e-18   1.7e-14   53.0   2.7     3    40     2    39     1    46 0.93 Spo0E like sporulation regulatory protein
CotH                 PF08757.6    323 sp|O06723|YISJ_BACSU -            307   1.8e-29  103.0   0.1   1   2   2.5e-18   3.7e-14   52.7   0.0    12    87    41   109    35   126 0.94 CotH protein
CotH                 PF08757.6    323 sp|O06723|YISJ_BACSU -            307   1.8e-29  103.0   0.1   2   2   8.1e-16   1.2e-11   44.4   0.2   142   323   137   300   131   300 0.90 CotH protein
FAA_hydrolase        PF01557.13   218 sp|O06724|YISK_BACSU -            301   1.6e-68  230.4   0.0   2   2   1.7e-72   2.5e-68  229.7   0.0     1   217    93   300    92   301 0.94 Fumarylacetoacetate (FAA) hydrolase family
DUF1516              PF07457.6    110 sp|O06725|YISL_BACSU -            118   3.8e-37  126.7  13.6   1   1     2e-40   4.2e-37  126.5  13.6     1   110     1   108     1   108 0.99 Protein of unknown function (DUF1516)
DUF2231              PF09990.4    104 sp|O06725|YISL_BACSU -            118     0.063   13.6   0.7   2   2     3e-05     0.063   13.6   0.7     1    55    53   107    53   116 0.76 Predicted membrane protein (DUF2231)
RDD                  PF06271.7    137 sp|O06725|YISL_BACSU -            118       1.6    8.6   9.1   1   2   0.00045      0.94    9.3   4.4    17    80    10    71     4    75 0.73 RDD family
AA_permease_C        PF13906.1     51 sp|O06725|YISL_BACSU -            118       2.3    8.1   8.8   1   3   0.00025      0.54   10.1   0.7    21    43     1    23     1    28 0.88 C-terminus of AA_permease
SQS_PSY              PF00494.14   267 sp|O06728|YISP_BACSU -            267   1.7e-38  132.4   2.9   1   1   1.5e-42   2.2e-38  132.1   2.9     9   257    23   249    16   259 0.91 Squalene/phytoene synthase
MatE                 PF01554.13   162 sp|O07940|YISQ_BACSU -            455   1.7e-63  213.1  47.5   1   3   1.4e-33   6.8e-30  103.8  18.4     1   162    27   187    27   187 0.98 MatE
MatE                 PF01554.13   162 sp|O07940|YISQ_BACSU -            455   1.7e-63  213.1  47.5   3   3   4.8e-39   2.4e-35  121.5  13.1     1   162   252   413   252   413 1.00 MatE
Polysacc_synt_C      PF14667.1    146 sp|O07940|YISQ_BACSU -            455   1.1e-09   38.2  44.4   2   4   1.1e-12   5.3e-09   36.0  11.9     2    90   141   235   140   240 0.90 Polysaccharide biosynthesis C-terminal domain
Polysacc_synt_C      PF14667.1    146 sp|O07940|YISQ_BACSU -            455   1.1e-09   38.2  44.4   4   4   5.1e-05      0.25   11.1   2.3    12    83   376   450   366   454 0.87 Polysaccharide biosynthesis C-terminal domain
MVIN                 PF03023.9    452 sp|O07940|YISQ_BACSU -            455   5.6e-05   21.7  38.4   1   2   4.3e-06     0.021   13.2  22.4   203   406    24   228     1   232 0.82 MviN-like protein
MVIN                 PF03023.9    452 sp|O07940|YISQ_BACSU -            455   5.6e-05   21.7  38.4   2   2   9.5e-07    0.0047   15.4   8.7   181   404   227   448   225   454 0.87 MviN-like protein
DinB                 PF05163.7    169 sp|O07939|YIST_BACSU -            169   5.5e-32  110.7   2.3   1   1   1.8e-35   6.7e-32  110.5   2.3     8   162     5   163     1   168 0.91 DinB family
DinB_2               PF12867.2    127 sp|O07939|YIST_BACSU -            169   2.2e-07   31.2   0.2   1   1   7.4e-11   2.7e-07   30.9   0.2     6   125    15   139    10   141 0.83 DinB superfamily
Sec3_C               PF09763.4    701 sp|O07939|YIST_BACSU -            169     0.028   12.5   0.0   1   1   9.6e-06     0.035   12.2   0.0   132   191    63   121    57   141 0.81 Exocyst complex component Sec3
DUF3830              PF12903.2    147 sp|O07939|YIST_BACSU -            169     0.032   13.5   0.1   1   2   0.00011      0.39   10.0   0.0    38    76    11    64     6   106 0.75 Protein of unknown function (DUF3830)
LysE                 PF01810.13   191 sp|O06730|YISU_BACSU -            220   1.1e-27   96.6  15.2   1   1   9.4e-32   1.4e-27   96.2  15.2     3   188    31   214    29   218 0.89 LysE type translocator
Aminotran_1_2        PF00155.16   363 sp|Q796Q6|YISV_BACSU -            484   5.6e-33  114.3   0.0   1   1   5.6e-36   6.9e-33  114.0   0.0     2   351   122   462   121   473 0.84 Aminotransferase class I and II
GntR                 PF00392.16    64 sp|Q796Q6|YISV_BACSU -            484   1.9e-17   62.4   0.0   1   1   3.3e-20   4.1e-17   61.3   0.0     3    64    18    79    16    79 0.97 Bacterial regulatory proteins, gntR family
Aminotran_MocR       PF12897.2    425 sp|Q796Q6|YISV_BACSU -            484   2.6e-07   29.5   0.0   1   1   9.4e-10   1.2e-06   27.4   0.0   126   406   209   471   200   481 0.74 Alanine-glyoxylate amino-transferase
HTH_Crp_2            PF13545.1     76 sp|Q796Q6|YISV_BACSU -            484   2.4e-05   24.0   0.1   1   1   9.8e-08   0.00012   21.7   0.0    30    63    41    74    35    82 0.88 Crp-like helix-turn-helix domain
MarR_2               PF12802.2     62 sp|Q796Q6|YISV_BACSU -            484   0.00013   21.5   0.0   1   1     4e-07    0.0005   19.6   0.0    23    56    41    74    33    78 0.91 MarR family
MarR                 PF01047.17    59 sp|Q796Q6|YISV_BACSU -            484   0.00081   19.0   0.0   1   1   2.1e-06    0.0026   17.4   0.0    19    48    41    70    38    73 0.93 MarR family
HTH_11               PF08279.7     55 sp|Q796Q6|YISV_BACSU -            484    0.0059   16.2   0.0   1   1   1.2e-05     0.015   14.8   0.0    18    51    42    74    39    77 0.90 HTH domain
Fe_dep_repress       PF01325.14    60 sp|Q796Q6|YISV_BACSU -            484    0.0095   15.8   0.0   1   1   1.5e-05     0.019   14.9   0.0    19    56    36    73    16    77 0.82 Iron dependent repressor, N-terminal DNA binding domain
HTH_36               PF13730.1     55 sp|Q796Q6|YISV_BACSU -            484     0.025   14.6   0.0   1   1   4.4e-05     0.054   13.6   0.0    26    55    40    69    33    69 0.92 Helix-turn-helix domain
HTH_27               PF13463.1     68 sp|Q796Q6|YISV_BACSU -            484     0.027   14.8   0.0   1   1   0.00011      0.13   12.5   0.0    20    58    41    76    33    83 0.79 Winged helix DNA-binding domain
HTH_24               PF13412.1     48 sp|Q796Q6|YISV_BACSU -            484     0.028   13.8   0.0   1   1   5.4e-05     0.067   12.5   0.0    19    48    41    70    40    70 0.96 Winged helix-turn-helix DNA-binding
Rrf2                 PF02082.15    83 sp|Q796Q6|YISV_BACSU -            484     0.087   12.9   0.1   1   2   0.00053      0.66   10.1   0.0    28    61    42    75    35    85 0.89 Transcriptional regulator
Abhydrolase_6        PF12697.2    228 sp|O06734|YISY_BACSU -            268   4.3e-41  141.2   0.0   1   1   5.6e-44   4.9e-41  141.0   0.0     1   226    24   259    24   261 0.88 Alpha/beta hydrolase family
Abhydrolase_1        PF00561.15   230 sp|O06734|YISY_BACSU -            268   5.9e-27   94.7   0.0   1   1   8.7e-30   7.6e-27   94.3   0.0     1   230    49   264    49   264 0.91 alpha/beta hydrolase fold
Abhydrolase_5        PF12695.2    145 sp|O06734|YISY_BACSU -            268   7.2e-23   80.9   0.0   1   1   9.1e-25   7.9e-22   77.5   0.0     1   144    23   248    23   249 0.78 Alpha/beta hydrolase family
Abhydrolase_2        PF02230.11   216 sp|O06734|YISY_BACSU -            268   2.1e-08   33.8   0.0   2   3     8e-05      0.07   12.5   0.0   102   147    85   131    71   142 0.80 Phospholipase/Carboxylesterase
Abhydrolase_2        PF02230.11   216 sp|O06734|YISY_BACSU -            268   2.1e-08   33.8   0.0   3   3   4.1e-06    0.0035   16.7   0.0   135   213   190   263   183   266 0.85 Phospholipase/Carboxylesterase
FSH1                 PF03959.8    212 sp|O06734|YISY_BACSU -            268   9.2e-06   25.2   0.0   2   2   3.4e-05      0.03   13.7   0.0    90   200    78   248    54   250 0.60 Serine hydrolase (FSH1)
Abhydrolase_4        PF08386.5    103 sp|O06734|YISY_BACSU -            268     1e-05   25.3   0.0   1   1   2.2e-08     2e-05   24.4   0.0    31    90   206   265   194   267 0.88 TAP-like protein
DLH                  PF01738.13   218 sp|O06734|YISY_BACSU -            268   1.5e-05   24.4   0.0   2   2   1.3e-05     0.012   14.9   0.0   129   197   187   257   180   267 0.78 Dienelactone hydrolase family
Thioesterase         PF00975.15   229 sp|O06734|YISY_BACSU -            268   1.9e-05   25.0   0.0   1   1   2.6e-08   2.2e-05   24.7   0.0    27   131    48   151    35   257 0.74 Thioesterase domain
Peptidase_S9         PF00326.16   213 sp|O06734|YISY_BACSU -            268   0.00034   19.9   0.1   2   2   1.5e-05     0.013   14.6   0.0   143   195   208   256   186   266 0.83 Prolyl oligopeptidase family
Hydrolase_4          PF12146.3     79 sp|O06734|YISY_BACSU -            268   0.00073   19.3   0.1   1   1   1.8e-06    0.0016   18.2   0.1    19    78    24    82    10    83 0.82 Putative lysophospholipase
DUF1057              PF06342.7    297 sp|O06734|YISY_BACSU -            268   0.00085   18.2   0.0   1   1   1.3e-06    0.0011   17.8   0.0    38   124    24   108    15   169 0.80 Alpha/beta hydrolase of unknown function (DUF1057)
Peptidase_S15        PF02129.13   272 sp|O06734|YISY_BACSU -            268    0.0024   17.3   0.0   1   1   4.7e-05     0.041   13.3   0.0    48   239    39   220    26   229 0.62 X-Pro dipeptidyl-peptidase (S15 family)
Ndr                  PF03096.9    283 sp|O06734|YISY_BACSU -            268    0.0032   15.9   0.0   1   2     2e-05     0.017   13.5   0.0    76   134    68   124    10   130 0.77 Ndr family
DUF3530              PF12048.3    310 sp|O06734|YISY_BACSU -            268    0.0068   15.4   0.0   1   2   3.5e-05      0.03   13.3   0.0   191   233    86   128    72   140 0.86 Protein of unknown function (DUF3530)
TPR_15               PF13429.1    280 sp|O06734|YISY_BACSU -            268     0.039   13.0   0.0   1   1   6.7e-05     0.058   12.4   0.0    77   134   138   195   134   209 0.91 Tetratricopeptide repeat
DUF161               PF02588.10    82 sp|O06740|YITE_BACSU -            209     7e-20   71.1  24.7   1   2   2.7e-15     4e-11   43.0   5.6     3    80    12    90    10    93 0.90 Uncharacterized BCR, YitT family COG1284
DUF161               PF02588.10    82 sp|O06740|YITE_BACSU -            209     7e-20   71.1  24.7   2   2   1.6e-12   2.3e-08   34.2  11.1     6    82   111   187   106   187 0.94 Uncharacterized BCR, YitT family COG1284
MR_MLE_C             PF13378.1    111 sp|O06741|YITF_BACSU -            371   2.5e-16   59.6   0.0   1   1   1.1e-19   5.5e-16   58.5   0.0     1   111   239   355   239   355 0.79 Enolase C-terminal domain-like
MR_MLE               PF01188.16    67 sp|O06741|YITF_BACSU -            371   3.2e-10   40.4   0.0   1   1   1.4e-13   6.8e-10   39.3   0.0     6    67   175   239   170   239 0.86 Mandelate racemase / muconate lactonizing enzyme, C-terminal domain
MR_MLE_N             PF02746.11   117 sp|O06741|YITF_BACSU -            371   7.9e-08   32.3   0.0   1   1   3.6e-11   1.8e-07   31.1   0.0    25   117    28   114     6   114 0.84 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain
MFS_1                PF07690.11   352 sp|Q796Q1|YITG_BACSU -            422   2.1e-66  224.0  47.0   1   2   3.5e-56   7.5e-53  179.4  29.0     7   347    21   356    16   356 0.85 Major Facilitator Superfamily
MFS_1                PF07690.11   352 sp|Q796Q1|YITG_BACSU -            422   2.1e-66  224.0  47.0   2   2   2.1e-19   4.5e-16   58.5  10.0    35   187   256   409   256   420 0.88 Major Facilitator Superfamily
MFS_2                PF13347.1    428 sp|Q796Q1|YITG_BACSU -            422     1e-15   57.0  22.6   1   2   3.6e-07   0.00077   17.9   3.2   261   343    46   131    36   138 0.91 MFS/sugar transport protein
MFS_2                PF13347.1    428 sp|Q796Q1|YITG_BACSU -            422     1e-15   57.0  22.6   2   2   1.1e-15   2.3e-12   46.0   9.3   174   385   165   371   140   375 0.76 MFS/sugar transport protein
MFS_3                PF05977.8    524 sp|Q796Q1|YITG_BACSU -            422   6.1e-14   51.0   8.4   1   1   4.1e-17   8.7e-14   50.5   8.4    38   404    38   405    33   418 0.80 Transmembrane secretion effector
Sugar_tr             PF00083.19   451 sp|Q796Q1|YITG_BACSU -            422   1.7e-09   36.7  32.1   1   3   1.1e-12   2.3e-09   36.3   2.9    38   117    37   118    10   120 0.88 Sugar (and other) transporter
Sugar_tr             PF00083.19   451 sp|Q796Q1|YITG_BACSU -            422   1.7e-09   36.7  32.1   2   3   6.7e-05      0.14   10.6   1.6   363   440   117   193   116   197 0.95 Sugar (and other) transporter
TRI12                PF06609.8    599 sp|Q796Q1|YITG_BACSU -            422    0.0003   19.1   4.8   1   2   1.4e-07    0.0003   19.1   4.8    67   216    33   188    15   196 0.73 Fungal trichothecene efflux pump (TRI12)
MFS_1_like           PF12832.2     77 sp|Q796Q1|YITG_BACSU -            422    0.0035   17.1   0.8   1   2   3.8e-05     0.081   12.7   0.3    19    64    29    74    25    83 0.82 MFS_1 like family
Acetyltransf_7       PF13508.1     79 sp|O06743|YITH_BACSU -            282   3.3e-10   39.9   0.1   1   2     8e-13     2e-09   37.4   0.1     3    78    42   119    40   120 0.90 Acetyltransferase (GNAT) domain
Acetyltransf_1       PF00583.19    83 sp|O06743|YITH_BACSU -            282   2.9e-07   30.4   0.0   1   2   5.6e-10   1.4e-06   28.2   0.0     5    83    52   119    48   119 0.88 Acetyltransferase (GNAT) family
Acetyltransf_10      PF13673.1    117 sp|O06743|YITH_BACSU -            282   2.9e-05   24.1   0.0   1   2   7.3e-08   0.00018   21.6   0.0    27   117    26   118     3   118 0.76 Acetyltransferase (GNAT) domain
Acetyltransf_9       PF13527.1    127 sp|O06743|YITH_BACSU -            282   2.9e-05   23.9   0.0   1   2   2.4e-07    0.0006   19.6   0.0     7   126    12   120     6   121 0.80 Acetyltransferase (GNAT) domain
FR47                 PF08445.5     86 sp|O06743|YITH_BACSU -            282    0.0009   18.9   0.0   1   1     1e-06    0.0025   17.5   0.0    20    78    65   119    50   127 0.72 FR47-like protein
Acetyltransf_1       PF00583.19    83 sp|O06744|YITI_BACSU -            149   3.8e-09   36.4   0.0   1   1   1.4e-12   5.2e-09   36.0   0.0     3    83    46   124    44   124 0.93 Acetyltransferase (GNAT) family
Acetyltransf_7       PF13508.1     79 sp|O06744|YITI_BACSU -            149   6.5e-09   35.8   0.0   1   1   2.7e-12   9.8e-09   35.2   0.0     3    79    39   125    37   125 0.82 Acetyltransferase (GNAT) domain
Acetyltransf_9       PF13527.1    127 sp|O06744|YITI_BACSU -            149   8.9e-06   25.5   0.0   1   1   3.1e-09   1.1e-05   25.2   0.0    11   126    10   125     3   126 0.87 Acetyltransferase (GNAT) domain
Acetyltransf_10      PF13673.1    117 sp|O06744|YITI_BACSU -            149     8e-05   22.7   0.0   1   1   2.5e-08   9.2e-05   22.5   0.0    37   117    33   123     9   123 0.84 Acetyltransferase (GNAT) domain
S-methyl_trans       PF02574.11   305 sp|O06745|YITJ_BACSU -            612   3.3e-80  269.6   0.0   1   1   6.3e-84   4.7e-80  269.1   0.0     1   303    11   280    11   282 0.98 Homocysteine S-methyltransferase
MTHFR                PF02219.12   287 sp|O06745|YITJ_BACSU -            612     4e-28   98.3   0.0   2   2   1.4e-31   1.1e-27   96.9   0.0     6   259   313   572   310   597 0.86 Methylenetetrahydrofolate reductase
DUF520               PF04461.8    160 sp|O06746|YITK_BACSU -            163   1.3e-62  210.3   9.7   1   1   3.1e-66   1.5e-62  210.1   9.7     2   160     5   163     4   163 0.99 Protein of unknown function (DUF520)
DNA_pol3_beta_2      PF02767.11   116 sp|O06746|YITK_BACSU -            163    0.0029   17.6   1.1   1   2   1.8e-05     0.087   12.8   0.0     4    53    12    63     9   102 0.80 DNA polymerase III beta subunit, central domain
mTERF                PF02536.9    345 sp|O06746|YITK_BACSU -            163     0.024   13.2   0.7   1   1   5.8e-06     0.029   12.9   0.7     3    92    29   116    27   132 0.88 mTERF
DUF161               PF02588.10    82 sp|P39803|YITT_BACSU -            280   1.1e-31  109.0  26.5   1   2   1.7e-17   8.6e-14   51.6  10.6     2    82     9    96     8    96 0.97 Uncharacterized BCR, YitT family COG1284
DUF161               PF02588.10    82 sp|P39803|YITT_BACSU -            280   1.1e-31  109.0  26.5   2   2   3.4e-21   1.7e-17   63.5   7.8     1    82   108   189   108   189 0.97 Uncharacterized BCR, YitT family COG1284
DUF2179              PF10035.4     55 sp|P39803|YITT_BACSU -            280   4.6e-19   67.7   1.4   2   2   3.5e-22   1.7e-18   65.9   0.6     1    55   221   275   221   275 0.98 Uncharacterized protein conserved in bacteria (DUF2179)
Hydrolase_3          PF08282.7    254 sp|P70947|YITU_BACSU -            270   3.5e-67  226.6   0.1   1   1   2.4e-70   3.9e-67  226.4   0.1     1   254     8   264     8   264 0.95 haloacid dehalogenase-like hydrolase
S6PP                 PF05116.8    247 sp|P70947|YITU_BACSU -            270   2.5e-11   43.3   0.0   1   2   1.9e-08   3.2e-05   23.3   0.0     2    62     5    65     4    83 0.83 Sucrose-6F-phosphate phosphohydrolase
S6PP                 PF05116.8    247 sp|P70947|YITU_BACSU -            270   2.5e-11   43.3   0.0   2   2   9.3e-07    0.0015   17.8   0.0   156   212   187   243   155   262 0.82 Sucrose-6F-phosphate phosphohydrolase
HAD                  PF12710.2    192 sp|P70947|YITU_BACSU -            270   1.4e-06   28.5   1.8   2   2   2.2e-07   0.00036   20.7   0.0    86   192    23   229    21   229 0.84 haloacid dehalogenase-like hydrolase
Trehalose_PPase      PF02358.11   235 sp|P70947|YITU_BACSU -            270   4.1e-05   22.6   0.0   1   2   6.1e-08    0.0001   21.3   0.0     2    98    10   102     9   107 0.89 Trehalose-phosphatase
Hydrolase            PF00702.21   215 sp|P70947|YITU_BACSU -            270   0.00014   22.3   0.1   2   2    0.0002      0.32   11.3   0.0   134   215    29   232    21   232 0.57 haloacid dehalogenase-like hydrolase
Hydrolase_6          PF13344.1    101 sp|P70947|YITU_BACSU -            270      0.01   15.7   0.0   1   1   1.7e-05     0.028   14.2   0.0     1    51     8    59     8    65 0.89 Haloacid dehalogenase-like hydrolase
Phage_tail_U         PF06141.6    133 sp|P70947|YITU_BACSU -            270     0.025   14.5   0.0   1   1   2.9e-05     0.048   13.6   0.0    34    72   157   193   134   203 0.83 Phage minor tail protein U
Acid_PPase           PF12689.2    169 sp|P70947|YITU_BACSU -            270     0.035   13.7   0.0   2   2   0.00049       0.8    9.3   0.0    90   146   176   234   122   247 0.84 Acid Phosphatase
DUF59                PF01883.14    72 sp|P70949|YITW_BACSU -            102     2e-19   69.3   0.4   1   1   1.7e-23   2.5e-19   69.0   0.4     1    71     6    79     6    80 0.95 Domain of unknown function DUF59
FAD_binding_4        PF01565.18   139 sp|Q796P5|YITY_BACSU -            476   3.9e-33  113.8   0.1   1   1   1.5e-36   5.7e-33  113.3   0.1     5   138    49   180    45   181 0.96 FAD binding domain
ALO                  PF04030.9    259 sp|Q796P5|YITY_BACSU -            476   1.5e-05   24.7   1.4   1   1   5.7e-09   2.1e-05   24.2   1.4   126   258   342   474   203   475 0.79 D-arabinono-1,4-lactone oxidase
DUF4227              PF14004.1     71 sp|Q796P5|YITY_BACSU -            476     0.075   12.8   0.0   1   1   6.7e-05      0.25   11.2   0.0    31    52   118   139   114   143 0.89 Protein of unknown function (DUF4227)
FAD-oxidase_C        PF02913.14   248 sp|Q796P5|YITY_BACSU -            476      0.11   11.8   0.0   1   1     6e-05      0.22   10.7   0.0   135   241   348   465   340   469 0.73 FAD linked oxidases, C-terminal domain
MFS_1                PF07690.11   352 sp|P70952|YITZ_BACSU -            164   4.8e-16   58.4  17.2   1   1   3.6e-20   5.4e-16   58.2  17.2     9   167     2   159     1   163 0.92 Major Facilitator Superfamily
DinB                 PF05163.7    169 sp|Q7WY73|YIZA_BACSU -            159   7.3e-30  103.8   1.2   1   1   1.7e-33   8.4e-30  103.6   1.2     9   152     3   144     1   151 0.96 DinB family
DinB_2               PF12867.2    127 sp|Q7WY73|YIZA_BACSU -            159   7.9e-13   48.8   1.6   1   1     2e-16     1e-12   48.5   1.6     4   127    10   132     8   132 0.91 DinB superfamily
DUF664               PF04978.7    150 sp|Q7WY73|YIZA_BACSU -            159   8.8e-06   26.0   0.6   1   1   7.5e-09   3.7e-05   24.0   0.6    14   142    16   133     9   139 0.83 Protein of unknown function (DUF664)
DUF3603              PF12227.3    214 sp|O31597|YJBA_BACSU -            250  4.1e-117  388.8   3.2   1   1    4e-121  5.9e-117  388.3   3.2     1   214    35   250    35   250 0.99 Protein of unknown function (DUF3603)
MFS_1                PF07690.11   352 sp|O31600|YJBB_BACSU -            405   9.5e-13   47.5  52.0   1   2   2.1e-13     1e-09   37.5  28.9     3   216    10   241     9   249 0.78 Major Facilitator Superfamily
MFS_1                PF07690.11   352 sp|O31600|YJBB_BACSU -            405   9.5e-13   47.5  52.0   2   2   7.4e-07    0.0037   16.0  14.8    37   168   256   389   248   403 0.87 Major Facilitator Superfamily
Sugar_tr             PF00083.19   451 sp|O31600|YJBB_BACSU -            405    0.0025   16.4   4.8   1   3   5.2e-05      0.26    9.8   9.3    43   104    39    98     8   164 0.77 Sugar (and other) transporter
Sugar_tr             PF00083.19   451 sp|O31600|YJBB_BACSU -            405    0.0025   16.4   4.8   2   3   5.1e-07    0.0025   16.4   4.8    43    97   244   304   177   317 0.79 Sugar (and other) transporter
MFS_2                PF13347.1    428 sp|O31600|YJBB_BACSU -            405    0.0029   16.0  43.4   1   2   0.00012      0.59    8.4  16.3   222   381     4   164     2   165 0.81 MFS/sugar transport protein
MFS_2                PF13347.1    428 sp|O31600|YJBB_BACSU -            405    0.0029   16.0  43.4   2   2   5.7e-06     0.028   12.8  19.1   178   384   169   383   167   394 0.79 MFS/sugar transport protein
TerC                 PF03741.11   184 sp|O31603|YJBE_BACSU -            218   3.3e-43  147.2   7.6   1   1   6.2e-47   4.6e-43  146.7   7.6     2   183    11   180    10   181 0.96 Integral membrane protein TerC family
LysE                 PF01810.13   191 sp|O31603|YJBE_BACSU -            218   0.00048   19.4   3.0   1   2   6.4e-08   0.00048   19.4   3.0     7   112    19   120    13   155 0.82 LysE type translocator
Thioredoxin_5        PF13743.1    176 sp|O31606|YJBH_BACSU -            299   3.1e-71  238.5   0.6   1   1   1.4e-74   4.3e-71  238.0   0.1     1   176    24   216    24   216 0.99 Thioredoxin
DSBA                 PF01323.15   193 sp|O31606|YJBH_BACSU -            299   1.3e-09   37.9   0.1   1   1   9.3e-13   2.8e-09   36.8   0.1     2   190    23   216    22   219 0.79 DSBA-like thioredoxin domain
Thioredoxin_4        PF13462.1    163 sp|O31606|YJBH_BACSU -            299   1.3e-07   31.8   0.4   1   2   1.6e-05     0.046   13.7   0.0     8    42    14    48    11    81 0.90 Thioredoxin
Thioredoxin_4        PF13462.1    163 sp|O31606|YJBH_BACSU -            299   1.3e-07   31.8   0.4   2   2     3e-06     0.009   16.0   0.1    67   142   112   192    95   218 0.78 Thioredoxin
Thioredoxin_2        PF13098.1    112 sp|O31606|YJBH_BACSU -            299   4.2e-05   23.7   0.1   1   1   1.8e-07   0.00053   20.1   0.1     8   112    22   218    15   218 0.67 Thioredoxin-like domain
Thioredoxin          PF00085.15   104 sp|O31606|YJBH_BACSU -            299    0.0013   18.3   1.7   2   2   0.00027      0.81    9.3   0.0    41    88   158   205   154   218 0.71 Thioredoxin
SLT                  PF01464.15   121 sp|O31608|YJBJ_BACSU -            181   2.9e-33  113.9   0.2   1   1   1.8e-36   5.3e-33  113.0   0.2     2   118    63   169    62   172 0.93 Transglycosylase SLT domain
SLT_2                PF13406.1    262 sp|O31608|YJBJ_BACSU -            181   2.5e-07   29.8   0.8   1   2   2.1e-05     0.062   12.1   0.0    74   102    61    89    11    93 0.76 Transglycosylase SLT domain
SLT_2                PF13406.1    262 sp|O31608|YJBJ_BACSU -            181   2.5e-07   29.8   0.8   2   2   8.6e-07    0.0026   16.7   0.1   151   180    94   123    89   129 0.85 Transglycosylase SLT domain
Lysozyme_like        PF13702.1    160 sp|O31608|YJBJ_BACSU -            181   4.4e-06   26.2   2.4   2   2   1.9e-09   5.6e-06   25.9   0.4     9   100    61   156    58   160 0.81 Lysozyme-like
Transglycosylas      PF06737.9     77 sp|O31608|YJBJ_BACSU -            181   0.00022   21.4   0.2   2   2   2.7e-07   0.00081   19.6   0.0     7    44    78   115    72   135 0.88 Transglycosylase-like domain
AreA_N               PF07573.6     88 sp|O31608|YJBJ_BACSU -            181     0.036   14.6   0.3   1   1     2e-05     0.058   13.9   0.3    21    66    31    78    13    91 0.68 Nitrogen regulatory protein AreA N terminus
ASD2                 PF08687.6    264 sp|O31610|YJBL_BACSU -            122      0.05   12.9   0.1   1   1   9.1e-06     0.067   12.5   0.1   101   133    88   120    67   121 0.93 Apx/Shroom domain ASD2
RelA_SpoT            PF04607.12   116 sp|O31611|YJBM_BACSU -            211   7.6e-38  129.0   0.3   1   1   2.7e-41   1.3e-37  128.3   0.3     1   115    45   163    45   164 0.98 Region found in RelA / SpoT proteins
Surfac_D-trimer      PF09006.6     46 sp|O31611|YJBM_BACSU -            211     0.019   14.6   0.4   3   3   4.2e-05      0.21   11.3   0.1     7    27   186   206   179   208 0.88 Lung surfactant protein D coiled-coil trimerisation
RNA_pol_Rbc25        PF08292.7    122 sp|O31611|YJBM_BACSU -            211      0.04   14.1   0.3   1   1   1.7e-05     0.085   13.0   0.3    15    47    72   104    67   209 0.88 RNA polymerase III subunit Rpc25
PseudoU_synth_2      PF00849.17   164 sp|O31613|YJBO_BACSU -            283   9.8e-25   87.2   0.2   1   1   9.2e-29   1.4e-24   86.8   0.2     2   163    75   224    74   225 0.86 RNA pseudouridylate synthase
Na_H_Exchanger       PF00999.16   380 sp|O31615|YJBQ_BACSU -            614   2.1e-80  270.0  51.4   1   1   1.1e-83   2.8e-80  269.6  51.4     2   379    10   388     9   392 0.93 Sodium/hydrogen exchanger family
TrkA_N               PF02254.13   116 sp|O31615|YJBQ_BACSU -            614   3.7e-14   52.7   0.2   1   1   3.3e-17   8.2e-14   51.5   0.2     2   111   405   514   404   518 0.90 TrkA-N domain
TrkA_C               PF02080.16    71 sp|O31615|YJBQ_BACSU -            614   1.3e-11   43.9   0.3   2   2   5.7e-14   1.4e-10   40.5   0.1     8    69   552   611   548   613 0.93 TrkA-C domain
dTMP_synthase        PF02593.9    218 sp|O31615|YJBQ_BACSU -            614   0.00056   19.3   0.2   1   1   3.7e-07   0.00091   18.6   0.2    35    93   448   510   418   518 0.79 Thymidylate synthase
NAD_binding_2        PF03446.10   163 sp|O31615|YJBQ_BACSU -            614     0.015   15.1   0.0   1   1   1.2e-05     0.029   14.2   0.0     2    58   402   458   401   524 0.85 NAD binding domain of 6-phosphogluconate dehydrogenase
K_oxygenase          PF13434.1    341 sp|O31615|YJBQ_BACSU -            614      0.15   10.9   0.0   1   2   0.00013      0.33    9.8   0.0   179   241   390   452   382   462 0.90 L-lysine 6-monooxygenase (NADPH-requiring)
DUF1360              PF07098.6    105 sp|O31623|YJCA_BACSU -            118   8.6e-42  141.1   0.7   1   1     2e-45     1e-41  140.9   0.7     1   105    10   114    10   114 0.99 Protein of unknown function (DUF1360)
DUF3529              PF12046.3    173 sp|O31623|YJCA_BACSU -            118    0.0071   15.3   2.4   1   1   1.4e-06    0.0071   15.3   2.4    69   125    51   108    25   110 0.74 Protein of unknown function (DUF3529)
DUF2367              PF10164.4     98 sp|O31623|YJCA_BACSU -            118     0.058   13.2   0.1   1   1   1.7e-05     0.082   12.7   0.1    42    76    47    82    26    91 0.84 Uncharacterized conserved protein (DUF2367)
UvrD-helicase        PF00580.16   315 sp|O31626|YJCD_BACSU -            759   1.1e-64  218.7   7.0   1   1   2.1e-65   3.1e-62  210.6   7.0     1   315   136   399   136   399 0.89 UvrD/REP helicase N-terminal domain
UvrD_C               PF13361.1    351 sp|O31626|YJCD_BACSU -            759   2.4e-58  198.2   0.1   1   1     3e-61   4.4e-58  197.4   0.1     1   349   404   732   404   734 0.89 UvrD-like helicase C-terminal domain
AAA_19               PF13245.1     76 sp|O31626|YJCD_BACSU -            759   7.2e-14   51.2   0.9   1   1   1.2e-16   1.8e-13   50.0   0.3     2    75   143   222   140   222 0.85 Part of AAA domain
UvrD_C_2             PF13538.1    104 sp|O31626|YJCD_BACSU -            759   1.5e-12   47.5   0.0   1   1   3.2e-15   4.7e-12   45.9   0.0    42   103   653   729   614   730 0.77 UvrD-like helicase C-terminal domain
Viral_helicase1      PF01443.13   234 sp|O31626|YJCD_BACSU -            759   2.9e-07   30.2   0.8   3   3   3.5e-06    0.0053   16.3   0.1   164   232   644   729   611   731 0.73 Viral (Superfamily 1) RNA helicase
AAA_30               PF13604.1    196 sp|O31626|YJCD_BACSU -            759   0.00015   21.3   0.0   1   2     6e-07   0.00089   18.8   0.0     2    67   136   201   135   241 0.72 AAA domain
AAA_12               PF13087.1    200 sp|O31626|YJCD_BACSU -            759   0.00074   18.9   0.1   2   2   8.5e-06     0.013   14.9   0.0   123   195   648   729   611   734 0.70 AAA domain
AAA_14               PF13173.1    128 sp|O31626|YJCD_BACSU -            759    0.0028   17.5   0.4   2   2     7e-05       0.1   12.4   0.8    21    86   299   365   294   382 0.75 AAA domain
Exonuc_V_gamma       PF04257.9    805 sp|O31626|YJCD_BACSU -            759    0.0031   15.5   0.2   1   1     4e-06     0.006   14.6   0.0   626   701   662   730   639   751 0.86 Exodeoxyribonuclease V, gamma subunit
zf-ribbon_3          PF13248.1     26 sp|O31626|YJCD_BACSU -            759      0.12   11.6   0.4   1   1   0.00017      0.26   10.5   0.4    15    25    31    41    28    42 0.85 zinc-ribbon domain
Acetyltransf_7       PF13508.1     79 sp|O31628|YJCF_BACSU -            140   1.4e-11   44.4   0.0   1   1     8e-15     2e-11   43.8   0.0     3    79    42   121    40   121 0.89 Acetyltransferase (GNAT) domain
Acetyltransf_1       PF00583.19    83 sp|O31628|YJCF_BACSU -            140   2.5e-09   37.0   0.3   1   1   1.5e-12   3.7e-09   36.4   0.3     2    83    48   120    47   120 0.91 Acetyltransferase (GNAT) family
Acetyltransf_10      PF13673.1    117 sp|O31628|YJCF_BACSU -            140   2.9e-09   37.0   0.0   1   1   1.5e-12   3.7e-09   36.7   0.0    32   117    32   119     4   119 0.84 Acetyltransferase (GNAT) domain
FR47                 PF08445.5     86 sp|O31628|YJCF_BACSU -            140   6.8e-07   28.9   0.0   1   1   4.4e-10   1.1e-06   28.3   0.0    12    85    56   127    47   128 0.88 FR47-like protein
Acetyltransf_9       PF13527.1    127 sp|O31628|YJCF_BACSU -            140     3e-05   23.8   0.2   1   1   1.8e-07   0.00044   20.0   0.2     7   126     9   121     5   122 0.89 Acetyltransferase (GNAT) domain
Acetyltransf_5       PF13444.1    101 sp|O31628|YJCF_BACSU -            140    0.0003   21.3   0.0   1   2   4.7e-07    0.0012   19.4   0.0     1    60    18    71    18    80 0.85 Acetyltransferase (GNAT) domain
2_5_RNA_ligase2      PF13563.1    153 sp|O31629|YJCG_BACSU -            171     3e-21   75.7   0.1   1   1   7.1e-25   3.5e-21   75.5   0.1     4   147    12   151     8   169 0.85 2'-5' RNA ligase superfamily
LigT_PEase           PF02834.11    87 sp|O31629|YJCG_BACSU -            171   2.6e-12   46.5   0.0   1   2   1.9e-13   9.4e-10   38.3   0.0     4    87    10    83     7    83 0.84 LigT like Phosphoesterase
CPDase               PF07823.6    196 sp|O31629|YJCG_BACSU -            171   6.8e-07   28.9   0.3   1   2   2.7e-06     0.013   14.9   0.0    11   109    11   100     1   109 0.81 Cyclic phosphodiesterase-like protein
CPDase               PF07823.6    196 sp|O31629|YJCG_BACSU -            171   6.8e-07   28.9   0.3   2   2   4.6e-06     0.023   14.2   0.0    32    69   107   144    90   165 0.72 Cyclic phosphodiesterase-like protein
Acetyltransf_3       PF13302.1    142 sp|O31633|YJCK_BACSU -            181   3.1e-25   89.0   0.0   1   1   1.3e-28   3.7e-25   88.7   0.0     2   142     7   151     6   151 0.87 Acetyltransferase (GNAT) domain
Acetyltransf_4       PF13420.1    155 sp|O31633|YJCK_BACSU -            181   4.3e-20   72.2   0.2   1   1   1.6e-23   4.6e-20   72.1   0.2    27   154    38   170     9   171 0.81 Acetyltransferase (GNAT) domain
Acetyltransf_1       PF00583.19    83 sp|O31633|YJCK_BACSU -            181   2.1e-10   40.4   0.1   1   1   1.1e-13   3.3e-10   39.8   0.1     3    83    73   151    71   151 0.96 Acetyltransferase (GNAT) family
Acetyltransf_8       PF13523.1    152 sp|O31633|YJCK_BACSU -            181   4.2e-08   33.2   0.1   1   1   5.3e-11   1.6e-07   31.3   0.1    29   140    46   154    24   161 0.79 Acetyltransferase (GNAT) domain
Autoind_synth        PF00765.12   182 sp|O31633|YJCK_BACSU -            181     0.015   14.5   0.0   1   1   8.3e-06     0.025   13.8   0.0    31   102    52   122    29   136 0.84 Autoinducer synthetase
Tiny_TM_bacill       PF09680.5     24 sp|C0H3Y8|YJCZ_BACSU -             49   1.8e-12   46.4  10.8   2   2   1.2e-16   1.8e-12   46.4  10.8     1    24    26    49    26    49 0.98 Protein of unknown function (Tiny_TM_bacill)
adh_short            PF00106.20   167 sp|O31642|YJDA_BACSU -            251   2.8e-24   85.9   0.0   1   1   1.2e-27   3.6e-24   85.5   0.0     1   166     7   179     7   180 0.95 short chain dehydrogenase
adh_short_C2         PF13561.1    241 sp|O31642|YJDA_BACSU -            251   4.2e-23   82.3   0.0   1   1   1.7e-26   4.9e-23   82.1   0.0     1   240    13   248    13   249 0.86 Enoyl-(Acyl carrier protein) reductase
KR                   PF08659.5    181 sp|O31642|YJDA_BACSU -            251   8.8e-06   25.5   0.0   1   1   6.3e-09   1.9e-05   24.4   0.0     4   167    10   179     8   197 0.74 KR domain
Epimerase            PF01370.16   236 sp|O31642|YJDA_BACSU -            251    0.0025   17.3   0.1   1   1   1.7e-06    0.0052   16.2   0.1     2    88    10   110     9   193 0.82 NAD dependent epimerase/dehydratase family
YjeF_N               PF03853.10   169 sp|O31642|YJDA_BACSU -            251     0.021   14.4   0.0   1   1   1.1e-05     0.032   13.8   0.0    23    76     3    56     1   110 0.76 YjeF-related protein N-terminus
Acetyltransf_3       PF13302.1    142 sp|O31648|YJDG_BACSU -            168   9.1e-20   71.2   0.0   1   1   4.7e-23   9.9e-20   71.1   0.0    31   141    42   151     8   152 0.80 Acetyltransferase (GNAT) domain
Acetyltransf_1       PF00583.19    83 sp|O31648|YJDG_BACSU -            168   1.5e-10   40.9   0.0   1   1     1e-13   2.2e-10   40.4   0.0     3    82    75   151    73   152 0.95 Acetyltransferase (GNAT) family
Acetyltransf_8       PF13523.1    152 sp|O31648|YJDG_BACSU -            168   3.6e-05   23.6   0.0   1   1   3.3e-08   6.9e-05   22.7   0.0    79   137    95   152    63   158 0.87 Acetyltransferase (GNAT) domain
Acetyltransf_7       PF13508.1     79 sp|O31648|YJDG_BACSU -            168    0.0012   18.9   0.0   1   1   9.1e-07    0.0019   18.3   0.0     5    77    70   151    67   153 0.65 Acetyltransferase (GNAT) domain
FR47                 PF08445.5     86 sp|O31648|YJDG_BACSU -            168    0.0015   18.2   0.0   1   1   1.7e-06    0.0035   17.0   0.0    28    82   100   156    90   162 0.84 FR47-like protein
GNAT_acetyltran      PF12746.2    265 sp|O31648|YJDG_BACSU -            168    0.0018   17.1   0.0   1   1   1.1e-06    0.0024   16.7   0.0   188   251    92   160    63   165 0.78 GNAT acetyltransferase
Acetyltransf_4       PF13420.1    155 sp|O31648|YJDG_BACSU -            168    0.0071   16.2   0.0   2   2   7.4e-06     0.016   15.1   0.0     4   134    22   151    19   160 0.74 Acetyltransferase (GNAT) domain
tRNA_edit            PF04073.10   123 sp|O31650|YJDI_BACSU -            159   6.4e-24   84.1   0.0   1   1     6e-28   8.9e-24   83.6   0.0    10   122    38   149    34   150 0.97 Aminoacyl-tRNA editing domain
Molybdopterin        PF00384.17   432 sp|O34720|YJGC_BACSU -            985   1.5e-79  267.7   0.0   1   1   2.5e-82     2e-79  267.3   0.0     1   432   315   739   315   739 0.93 Molybdopterin oxidoreductase
Molydop_binding      PF01568.16   110 sp|O34720|YJGC_BACSU -            985     8e-21   73.9   0.0   1   1   2.2e-23   1.7e-20   72.8   0.0     2   109   823   928   822   929 0.97 Molydopterin dinucleotide binding domain
Molybdop_Fe4S4       PF04879.11    55 sp|O34720|YJGC_BACSU -            985   6.3e-18   64.3   0.5   2   2   8.1e-21   6.3e-18   64.3   0.5     1    55   258   312   258   312 0.97 Molybdopterin oxidoreductase Fe4S4 domain
Fer2_4               PF13510.1     82 sp|O34720|YJGC_BACSU -            985   1.4e-13   50.4   0.1   1   1   4.4e-16   3.4e-13   49.1   0.1     5    79     6    75     3    78 0.96 2Fe-2S iron-sulfur cluster binding domain
NADH-G_4Fe-4S_3      PF10588.4     41 sp|O34720|YJGC_BACSU -            985   9.4e-11   40.7   1.5   1   1   1.2e-13   9.4e-11   40.7   1.5     5    40    88   124    84   125 0.94 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region
Fer4                 PF00037.22    24 sp|O34720|YJGC_BACSU -            985     6e-09   35.1  21.4   1   3   6.6e-08   5.2e-05   22.6   3.0     2    18   142   158   141   160 0.92 4Fe-4S binding domain
Fer4                 PF00037.22    24 sp|O34720|YJGC_BACSU -            985     6e-09   35.1  21.4   2   3   3.1e-07   0.00024   20.5   5.1     1    23   184   206   184   207 0.93 4Fe-4S binding domain
Fer4_6               PF12837.2     24 sp|O34720|YJGC_BACSU -            985   2.9e-08   33.2  16.2   1   2   3.6e-07   0.00028   20.6   2.8     3    19   142   158   140   159 0.95 4Fe-4S binding domain
Fer4_6               PF12837.2     24 sp|O34720|YJGC_BACSU -            985   2.9e-08   33.2  16.2   2   2   4.8e-06    0.0038   17.0   5.7     4    23   186   205   186   206 0.93 4Fe-4S binding domain
Fer4_21              PF14697.1     59 sp|O34720|YJGC_BACSU -            985   5.8e-07   29.2  10.8   1   1   7.5e-10   5.8e-07   29.2  10.8     4    54   144   204   142   208 0.70 4Fe-4S dicluster domain
Fer4_7               PF12838.2     52 sp|O34720|YJGC_BACSU -            985   9.9e-07   29.0  13.8   1   3   4.5e-05     0.035   14.4   5.7    14    49   122   159    98   164 0.64 4Fe-4S dicluster domain
Fer4_7               PF12838.2     52 sp|O34720|YJGC_BACSU -            985   9.9e-07   29.0  13.8   2   3   1.3e-09   9.9e-07   29.0  13.8     1    52   147   205   147   205 0.81 4Fe-4S dicluster domain
Fer4_8               PF13183.1     57 sp|O34720|YJGC_BACSU -            985   6.6e-06   26.0  11.5   2   3   8.5e-09   6.6e-06   26.0  11.5     3    56   146   204   144   205 0.75 4Fe-4S dicluster domain
Fer4_10              PF13237.1     52 sp|O34720|YJGC_BACSU -            985   9.6e-06   25.3  11.4   1   2   1.2e-08   9.6e-06   25.3  11.4     3    52   142   202   140   202 0.69 4Fe-4S dicluster domain
Fer4_10              PF13237.1     52 sp|O34720|YJGC_BACSU -            985   9.6e-06   25.3  11.4   2   2   0.00063       0.5   10.2   9.3     4    22   186   219   183   278 0.59 4Fe-4S dicluster domain
Fer4_9               PF13187.1     55 sp|O34720|YJGC_BACSU -            985   4.8e-05   23.5  13.3   1   3   0.00042      0.33   11.2   6.3     2    51    99   159    98   163 0.57 4Fe-4S dicluster domain
Fer4_9               PF13187.1     55 sp|O34720|YJGC_BACSU -            985   4.8e-05   23.5  13.3   2   3   6.2e-08   4.8e-05   23.5  13.3     2    55   148   206   147   206 0.87 4Fe-4S dicluster domain
Fer4_15              PF13459.1     65 sp|O34720|YJGC_BACSU -            985   0.00034   21.1   9.6   1   2   3.1e-05     0.024   15.1   1.2     4    21   144   161   142   175 0.88 4Fe-4S single cluster domain
Fer4_2               PF12797.2     22 sp|O34720|YJGC_BACSU -            985   0.00096   18.9   1.5   1   2   1.2e-06   0.00096   18.9   1.5     3    20   141   158   139   160 0.92 4Fe-4S binding domain
Fer4_2               PF12797.2     22 sp|O34720|YJGC_BACSU -            985   0.00096   18.9   1.5   2   2   3.5e-05     0.028   14.3   2.9     5    21   186   202   180   202 0.94 4Fe-4S binding domain
Fer4_16              PF13484.1     67 sp|O34720|YJGC_BACSU -            985    0.0022   18.7  12.0   1   2   2.8e-06    0.0022   18.7  12.0     1    67   147   204   147   204 0.88 4Fe-4S double cluster binding domain
Fer2_3               PF13085.1    110 sp|O34720|YJGC_BACSU -            985     0.019   14.7   0.4   1   1   8.8e-05     0.069   12.9   0.4    20    80    11    71     3   106 0.84 2Fe-2S iron-sulfur cluster binding domain
Fer4_17              PF13534.1     61 sp|O34720|YJGC_BACSU -            985      0.18   12.1  21.3   1   3   0.00088      0.69   10.3   4.4     7    57    98   159    96   164 0.53 4Fe-4S dicluster domain
Nudix_N              PF12535.3     58 sp|C0SPC3|YJHB_BACSU -            208   8.7e-25   85.9   1.8   1   1   1.7e-28   1.3e-24   85.4   1.8     1    57     5    61     5    62 0.97 Hydrolase of X-linked nucleoside diphosphate N terminal
NUDIX                PF00293.23   135 sp|C0SPC3|YJHB_BACSU -            208   9.7e-15   54.3   0.0   1   1   1.8e-18   1.3e-14   53.9   0.0     4   124    73   186    70   195 0.92 NUDIX domain
p450                 PF00067.17   463 sp|O34374|YJIB_BACSU -            396   5.4e-41  140.5   0.4   1   1     4e-42   5.9e-38  130.5   0.4    48   436    49   373    39   395 0.84 Cytochrome P450
Glyco_trans_1_3      PF13528.1    318 sp|O34539|YJIC_BACSU -            392   6.2e-18   65.0   0.0   1   2   5.7e-09   1.1e-05   24.8   0.0    13   133    15   138     9   178 0.81 Glycosyl transferase family 1
Glyco_trans_1_3      PF13528.1    318 sp|O34539|YJIC_BACSU -            392   6.2e-18   65.0   0.0   2   2   4.4e-13   8.1e-10   38.3   0.0   246   316   282   350   211   352 0.86 Glycosyl transferase family 1
UDPGT                PF00201.13   500 sp|O34539|YJIC_BACSU -            392   1.2e-14   53.7   0.1   2   2   4.1e-17   7.6e-14   51.1   0.0   276   410   220   355   204   386 0.88 UDP-glucoronosyl and UDP-glucosyl transferase
Glyco_tran_28_C      PF04101.11   167 sp|O34539|YJIC_BACSU -            392     9e-13   48.2   0.0   1   1   9.6e-16   1.8e-12   47.2   0.0    33   160   251   370   229   380 0.80 Glycosyltransferase family 28 C-terminal domain
Glyco_transf_28      PF03033.15   139 sp|O34539|YJIC_BACSU -            392   2.2e-07   30.6   0.0   1   1   4.2e-10   7.7e-07   28.9   0.0     6    93    11   104     6   124 0.79 Glycosyltransferase family 28 N-terminal domain
Glyco_trans_1_4      PF13692.1    135 sp|O34539|YJIC_BACSU -            392    0.0031   17.6   0.0   1   1   4.9e-06     0.009   16.1   0.0    26   109   243   320   221   351 0.73 Glycosyl transferases group 1
Glyco_trans_4_4      PF13579.1    160 sp|O34539|YJIC_BACSU -            392     0.052   13.6   0.0   1   1   0.00011       0.2   11.7   0.0     7   100    20   124    15   137 0.67 Glycosyl transferase 4-like domain
Glyco_trans_4_2      PF13477.1    139 sp|O34539|YJIC_BACSU -            392     0.072   12.9   0.0   1   1   9.8e-05      0.18   11.6   0.0    13   103    20   124    10   150 0.72 Glycosyl transferase 4-like
ER_lumen_recept      PF00810.13   147 sp|O34539|YJIC_BACSU -            392      0.18   12.3   0.0   1   1    0.0003      0.56   10.6   0.0   100   133    79   112    70   115 0.90 ER lumen protein retaining receptor
UPF0014              PF03649.8    250 sp|O34684|YJKA_BACSU -            250   6.7e-55  185.9  21.6   1   1   1.5e-58   7.6e-55  185.7  21.6     9   248     3   240     1   242 0.94 Uncharacterised protein family (UPF0014)
ATPase_gene1         PF09527.5     55 sp|O34684|YJKA_BACSU -            250     0.084   12.6   0.2   2   3   1.7e-05     0.084   12.6   0.2    19    53    44    79    31    81 0.90 Putative F0F1-ATPase subunit (ATPase_gene1)
COX2-transmemb       PF09125.5     38 sp|O34684|YJKA_BACSU -            250      0.14   11.7   1.7   1   1   0.00012      0.58    9.7   1.7    16    30     3    17     2    19 0.91 Cytochrome C oxidase subunit II, transmembrane
ABC_tran             PF00005.22   137 sp|O34756|YJKB_BACSU -            250   8.2e-28   97.4   0.0   1   1   1.8e-30   1.2e-27   96.8   0.0     1   137    32   173    32   173 0.93 ABC transporter
SMC_N                PF02463.14   220 sp|O34756|YJKB_BACSU -            250   1.3e-09   37.6   0.0   2   2   2.3e-09   1.5e-06   27.6   0.0   112   204    74   207    63   221 0.68 RecF/RecN/SMC N terminal domain
AAA_21               PF13304.1    303 sp|O34756|YJKB_BACSU -            250   1.8e-08   34.6   0.1   1   2   5.4e-05     0.035   14.0   0.0     3    30    46    71    44    94 0.73 AAA domain
AAA_21               PF13304.1    303 sp|O34756|YJKB_BACSU -            250   1.8e-08   34.6   0.1   2   2   1.8e-06    0.0012   18.9   0.1   232   275   140   180   107   198 0.85 AAA domain
AAA_29               PF13555.1     62 sp|O34756|YJKB_BACSU -            250   6.7e-05   22.3   0.0   1   1   2.2e-07   0.00014   21.3   0.0    18    47    38    65    27    76 0.73 P-loop containing region of AAA domain
AAA_16               PF13191.1    185 sp|O34756|YJKB_BACSU -            250   0.00021   21.3   5.7   1   1   1.8e-06    0.0012   18.8   5.7    18   179    36   192    24   201 0.52 AAA ATPase domain
AAA_22               PF13401.1    131 sp|O34756|YJKB_BACSU -            250   0.00025   21.1   0.6   1   1     3e-06    0.0019   18.3   0.6     3   121    41   200    39   211 0.57 AAA domain
DUF258               PF03193.11   161 sp|O34756|YJKB_BACSU -            250    0.0021   17.2   0.0   1   1   8.5e-06    0.0054   15.9   0.0    22    58    28    65     5    93 0.76 Protein of unknown function, DUF258
Arch_ATPase          PF01637.13   234 sp|O34756|YJKB_BACSU -            250    0.0029   17.3   0.0   1   1   6.9e-06    0.0045   16.7   0.0    20    82    42   106    32   199 0.78 Archaeal ATPase
AAA_10               PF12846.2    304 sp|O34756|YJKB_BACSU -            250    0.0049   16.3   0.1   1   1   2.3e-05     0.015   14.7   0.0     4    23    45    65    42    85 0.84 AAA-like domain
AAA_23               PF13476.1    202 sp|O34756|YJKB_BACSU -            250    0.0089   16.3   0.0   1   1   2.3e-05     0.015   15.6   0.0    16    50    38    73    19   215 0.84 AAA domain
AAA_25               PF13481.1    194 sp|O34756|YJKB_BACSU -            250      0.01   15.2   0.0   1   1   2.7e-05     0.018   14.4   0.0    27    51    36    60    14   125 0.88 AAA domain
NB-ARC               PF00931.17   287 sp|O34756|YJKB_BACSU -            250     0.011   14.6   0.2   1   2   0.00056      0.36    9.6   0.0    10    37    33    60    24    72 0.81 NB-ARC domain
AAA_17               PF13207.1    121 sp|O34756|YJKB_BACSU -            250     0.015   16.1   0.5   1   1   0.00013     0.084   13.6   0.2     1    16    44    59    44    61 0.91 AAA domain
MobB                 PF03205.9    140 sp|O34756|YJKB_BACSU -            250     0.016   14.9   0.1   1   2   0.00016       0.1   12.2   0.0     2    19    44    61    43    67 0.89 Molybdopterin guanine dinucleotide synthesis protein B
AAA                  PF00004.24   132 sp|O34756|YJKB_BACSU -            250      0.02   15.0   0.0   1   1   0.00037      0.24   11.6   0.0     3    72    47   176    45   231 0.75 ATPase family associated with various cellular activities (AAA)
AAA_33               PF13671.1    143 sp|O34756|YJKB_BACSU -            250      0.02   14.7   0.0   1   1    0.0001     0.065   13.1   0.0     2    18    45    61    44   119 0.88 AAA domain
FtsK_SpoIIIE         PF01580.13   205 sp|O34756|YJKB_BACSU -            250     0.035   13.5   0.0   1   1   0.00012     0.076   12.4   0.0    31    74    35    76    24    97 0.81 FtsK/SpoIIIE family
AAA_24               PF13479.1    213 sp|O34756|YJKB_BACSU -            250     0.052   13.1   0.1   1   1   0.00033      0.21   11.1   0.0     2    22    41    61    40    95 0.90 AAA domain
T2SE                 PF00437.15   272 sp|O34756|YJKB_BACSU -            250     0.062   12.1   0.0   1   1   0.00015     0.097   11.5   0.0   113   148    24    62     7    98 0.72 Type II/IV secretion system protein
NACHT                PF05729.7    166 sp|O34756|YJKB_BACSU -            250     0.098   12.3   2.0   1   1   0.00045      0.29   10.7   2.0     2    19    44    61    43   217 0.75 NACHT domain
Pyr_redox_2          PF07992.9    201 sp|P80861|YJLD_BACSU -            392   9.3e-18   64.8   1.2   1   1   6.1e-21   1.5e-17   64.1   1.2     2   198     5   298     4   300 0.88 Pyridine nucleotide-disulphide oxidoreductase
Pyr_redox            PF00070.22    80 sp|P80861|YJLD_BACSU -            392   1.9e-11   44.1   2.4   2   2   5.6e-12   1.4e-08   35.0   0.2     2    70   157   238   156   249 0.87 Pyridine nucleotide-disulphide oxidoreductase
DAO                  PF01266.19   358 sp|P80861|YJLD_BACSU -            392     4e-06   25.9   0.1   3   3   2.2e-06    0.0054   15.6   0.0   146   214   207   271   203   338 0.78 FAD dependent oxidoreductase
Pyr_redox_3          PF13738.1    203 sp|P80861|YJLD_BACSU -            392   0.00016   21.7   1.0   2   3     3e-06    0.0074   16.3   0.0    80   189    56   176    35   195 0.75 Pyridine nucleotide-disulphide oxidoreductase
Trp_halogenase       PF04820.9    454 sp|P80861|YJLD_BACSU -            392     0.091   11.3   0.1   1   1   6.2e-05      0.15   10.6   0.1     2    33     5    37     4    44 0.88 Tryptophan halogenase
MFS_2                PF13347.1    428 sp|O34961|YJMB_BACSU -            459  5.9e-115  384.0  30.8   1   1  1.3e-118  6.6e-115  383.9  30.8     3   428    23   445    21   445 0.98 MFS/sugar transport protein
MFS_1                PF07690.11   352 sp|O34961|YJMB_BACSU -            459     6e-13   48.2  39.1   1   3   2.8e-09   1.4e-05   23.9  10.5   216   350    31   174    25   176 0.81 Major Facilitator Superfamily
MFS_1                PF07690.11   352 sp|O34961|YJMB_BACSU -            459     6e-13   48.2  39.1   2   3   2.3e-13   1.2e-09   37.4  14.0   123   351   167   391   165   392 0.76 Major Facilitator Superfamily
2TM                  PF13239.1     83 sp|O34961|YJMB_BACSU -            459      0.38   10.8   0.0   1   4   7.7e-05      0.38   10.8   0.0     6    56    84   139    79   159 0.76 2TM domain
Ldh_2                PF02615.9    335 sp|O34736|YJMC_BACSU -            337  2.1e-144  480.3   0.1   1   1  1.6e-148  2.4e-144  480.1   0.1     1   334     4   336     4   337 0.99 Malate/L-lactate dehydrogenase
ADH_N                PF08240.7    109 sp|O35045|YJMD_BACSU -            339   1.9e-37  127.3   1.7   1   1   7.6e-41   1.9e-37  127.3   1.7     1   108    25   131    25   132 0.98 Alcohol dehydrogenase GroES-like domain
ADH_zinc_N           PF00107.21   130 sp|O35045|YJMD_BACSU -            339   1.2e-30  105.7   0.6   1   1   1.1e-33   2.7e-30  104.5   0.3     1   128   172   297   172   299 0.98 Zinc-binding dehydrogenase
2-Hacid_dh_C         PF02826.14   178 sp|O35045|YJMD_BACSU -            339     0.002   17.2   0.0   1   1   1.8e-06    0.0044   16.1   0.0    27    80   153   206   128   219 0.78 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain
XdhC_C               PF13478.1    136 sp|O35045|YJMD_BACSU -            339     0.011   16.1   0.1   1   1   7.8e-06     0.019   15.2   0.1     1    95   165   267   165   278 0.73 XdhC Rossmann domain
AlaDh_PNT_C          PF01262.16   168 sp|O35045|YJMD_BACSU -            339     0.012   15.1   1.1   2   2   1.3e-05     0.032   13.7   0.5    22    75   164   217   150   233 0.88 Alanine dehydrogenase/PNT, C-terminal domain
MTS                  PF05175.9    170 sp|O35045|YJMD_BACSU -            339     0.082   12.2   0.4   1   2   0.00011      0.27   10.5   0.3    41   103   169   234   166   239 0.81 Methyltransferase small domain
TauE                 PF01925.14   240 sp|O34578|YJNA_BACSU -            254   2.7e-46  157.9  28.3   1   1   4.2e-50   3.1e-46  157.7  28.3     2   240     6   253     5   253 0.88 Sulfite exporter TauE/SafE
DinB                 PF05163.7    169 sp|O34334|YJOA_BACSU -            154   1.9e-39  135.0   3.1   1   1   5.6e-43   2.1e-39  134.9   3.1     1   156     1   151     1   154 0.98 DinB family
DinB_2               PF12867.2    127 sp|O34334|YJOA_BACSU -            154   1.1e-12   48.3   0.3   1   1   3.9e-16   1.4e-12   48.0   0.3     4   125    13   133    10   135 0.91 DinB superfamily
DUF664               PF04978.7    150 sp|O34334|YJOA_BACSU -            154    0.0022   18.2   0.7   1   1   1.7e-06    0.0063   16.7   0.7     6   141    11   135     6   142 0.75 Protein of unknown function (DUF664)
DUF1572              PF07609.6    163 sp|O34334|YJOA_BACSU -            154     0.065   12.7   2.1   1   1   0.00013      0.49    9.9   2.1     9   149     6   142     4   149 0.70 Protein of unknown function (DUF1572)
AAA                  PF00004.24   132 sp|O34703|YJOB_BACSU -            423   3.5e-24   85.4   0.0   1   1   1.2e-26   8.6e-24   84.2   0.0     1   131   223   336   223   337 0.95 ATPase family associated with various cellular activities (AAA)
AAA_5                PF07728.9    139 sp|O34703|YJOB_BACSU -            423   1.3e-08   34.6   0.0   1   1     4e-10     3e-07   30.2   0.0     2    90   223   298   222   323 0.79 AAA domain (dynein-related subfamily)
AAA_22               PF13401.1    131 sp|O34703|YJOB_BACSU -            423     2e-06   28.0   0.0   1   2   6.5e-06    0.0048   17.0   0.0     3    51   219   259   214   263 0.83 AAA domain
AAA_22               PF13401.1    131 sp|O34703|YJOB_BACSU -            423     2e-06   28.0   0.0   2   2   0.00058      0.43   10.7   0.0    68   127   250   314   239   318 0.80 AAA domain
AAA_16               PF13191.1    185 sp|O34703|YJOB_BACSU -            423   5.9e-05   23.1   0.1   1   2   2.4e-06    0.0018   18.3   0.0    25    63   221   256   209   273 0.73 AAA ATPase domain
RNA_helicase         PF00910.17   107 sp|O34703|YJOB_BACSU -            423    0.0003   20.9   0.0   1   1   9.4e-07    0.0007   19.7   0.0     1    68   223   291   223   308 0.84 RNA helicase
RuvB_N               PF05496.7    234 sp|O34703|YJOB_BACSU -            423    0.0026   16.8   0.0   1   1   5.1e-06    0.0038   16.3   0.0    53    79   223   249   172   300 0.75 Holliday junction DNA helicase ruvB N-terminus
AAA_17               PF13207.1    121 sp|O34703|YJOB_BACSU -            423     0.004   17.9   0.3   1   1   1.6e-05     0.012   16.4   0.1     2    27   223   248   223   350 0.87 AAA domain
AAA_24               PF13479.1    213 sp|O34703|YJOB_BACSU -            423    0.0041   16.7   0.1   1   1   1.1e-05    0.0084   15.7   0.1     6    23   223   240   220   250 0.88 AAA domain
Sigma54_activ_2      PF14532.1    138 sp|O34703|YJOB_BACSU -            423    0.0047   16.9   0.0   1   1   1.6e-05     0.012   15.7   0.0    23    99   222   303   218   326 0.72 Sigma-54 interaction domain
NACHT                PF05729.7    166 sp|O34703|YJOB_BACSU -            423    0.0075   15.9   0.0   1   1   4.1e-05      0.03   13.9   0.0     3    24   223   244   221   252 0.87 NACHT domain
AAA_25               PF13481.1    194 sp|O34703|YJOB_BACSU -            423      0.01   15.2   0.0   1   1   2.8e-05     0.021   14.2   0.0    36    59   223   246   216   316 0.76 AAA domain
AAA_19               PF13245.1     76 sp|O34703|YJOB_BACSU -            423     0.012   15.3   0.1   1   1   3.5e-05     0.026   14.2   0.1    12    33   223   242   217   254 0.78 Part of AAA domain
ABC_tran             PF00005.22   137 sp|O34703|YJOB_BACSU -            423     0.016   15.5   0.0   1   1     5e-05     0.037   14.3   0.0     8    36   217   245   213   281 0.84 ABC transporter
Mg_chelatase         PF01078.16   207 sp|O34703|YJOB_BACSU -            423      0.02   14.0   0.0   1   1   4.5e-05     0.033   13.3   0.0    25    65   223   264   220   276 0.80 Magnesium chelatase, subunit ChlI
Arch_ATPase          PF01637.13   234 sp|O34703|YJOB_BACSU -            423     0.044   13.4   0.0   1   1   0.00014       0.1   12.2   0.0    23    81   223   275   218   313 0.75 Archaeal ATPase
AAA_29               PF13555.1     62 sp|O34703|YJOB_BACSU -            423     0.048   13.1   0.0   1   1   0.00013       0.1   12.1   0.0    16    43   214   240   209   242 0.78 P-loop containing region of AAA domain
AAA_28               PF13521.1    163 sp|O34703|YJOB_BACSU -            423     0.061   13.2   0.0   1   1   0.00015      0.11   12.4   0.0     2    32   223   259   222   308 0.69 AAA domain
AAA_3                PF07726.6    131 sp|O34703|YJOB_BACSU -            423     0.077   12.6   0.0   1   1   0.00025      0.18   11.3   0.0     2    33   223   254   222   269 0.90 ATPase family associated with various cellular activities (AAA)
NTPase_1             PF03266.10   168 sp|O34703|YJOB_BACSU -            423     0.089   12.5   0.1   1   1   0.00028      0.21   11.3   0.0     2    23   223   244   222   264 0.88 NTPase
TIP49                PF06068.8    398 sp|O34703|YJOB_BACSU -            423     0.091   11.4   0.0   1   1   0.00019      0.14   10.8   0.0    51    92   221   260   218   292 0.80 TIP49 C-terminus
YCII                 PF03795.9     95 sp|O34446|YJPA_BACSU -             85   3.3e-15   56.0   0.0   1   1   2.6e-19   3.8e-15   55.8   0.0     9    95    10    82     2    82 0.90 YCII-related domain
DUF867               PF05908.6    194 sp|O34785|YJQB_BACSU -            200   1.5e-70  236.2   0.0   1   1   1.2e-74   1.7e-70  236.0   0.0     1   194     5   194     5   194 0.98 Protein of unknown function (DUF867)
Mn_catalase          PF05067.7    284 sp|O34423|YJQC_BACSU -            278  2.5e-137  456.2   0.0   1   1  3.7e-141  2.8e-137  456.1   0.0     1   271     1   272     1   278 0.99 Manganese containing catalase
Ferritin             PF00210.19   142 sp|O34423|YJQC_BACSU -            278     0.033   13.9   0.0   1   1   8.1e-06      0.06   13.1   0.0    11   140    35   195    22   197 0.78 Ferritin-like domain
PhoU_div             PF01865.11   214 sp|O34454|YKAA_BACSU -            205   1.2e-22   80.1   8.7   1   1   5.2e-26   1.5e-22   79.8   8.7    15   214    11   203     3   203 0.86 Protein of unknown function DUF47
PhoU                 PF01895.14    88 sp|O34454|YKAA_BACSU -            205   0.00024   21.4   4.4   2   2   2.6e-05     0.078   13.4   3.0    27    86   142   195    53   197 0.81 PhoU domain
PP-binding_2         PF14573.1     96 sp|O34454|YKAA_BACSU -            205    0.0008   19.3   1.4   2   3   3.2e-06    0.0094   15.9   0.1    29    81    68   120    53   136 0.77 Acyl-carrier
NGP1NT               PF08153.7    130 sp|O34454|YKAA_BACSU -            205       0.1   12.5   0.6   1   2   0.00026      0.77    9.7   0.1    31    69    20    61     4    74 0.78 NGP1NT (NUC091) domain
PMT_2                PF13231.1    159 sp|O34575|YKCB_BACSU -            716   6.6e-32  110.5  22.5   2   5     9e-36   6.6e-32  110.5  22.5     1   159    65   223    65   223 0.94 Dolichyl-phosphate-mannose-protein mannosyltransferase
PMT                  PF02366.13   245 sp|O34575|YKCB_BACSU -            716   4.4e-12   45.8  20.7   1   3   5.9e-16   4.4e-12   45.8  20.7    35   225    37   216     8   228 0.76 Dolichyl-phosphate-mannose-protein mannosyltransferase
Glycos_transf_2      PF00535.21   169 sp|O34319|YKCC_BACSU -            323   1.7e-34  118.9   0.1   1   1   1.2e-37   2.4e-34  118.4   0.1     1   167     8   170     8   171 0.97 Glycosyl transferase family 2
Glyco_tranf_2_3      PF13641.1    228 sp|O34319|YKCC_BACSU -            323   1.5e-06   28.2   0.0   1   1     1e-09   2.1e-06   27.6   0.0     3   179     7   176     5   211 0.77 Glycosyltransferase like family 2
Glyco_tranf_2_2      PF10111.4    281 sp|O34319|YKCC_BACSU -            323   1.1e-05   24.6   0.0   1   1   7.5e-09   1.6e-05   24.1   0.0     1   113     8   113     8   138 0.84 Glycosyltransferase like family 2
Glyco_transf_21      PF13506.1    175 sp|O34319|YKCC_BACSU -            323   0.00055   19.2   0.0   1   1   4.2e-07   0.00089   18.5   0.0    19   116    78   171    61   176 0.84 Glycosyl transferase family 21
Glyco_tranf_2_4      PF13704.1     97 sp|O34319|YKCC_BACSU -            323     0.029   14.6   0.0   1   1   3.1e-05     0.066   13.5   0.0    21    81    39    98    14   165 0.85 Glycosyl transferase family 2
THUMP                PF02926.12   144 sp|O34319|YKCC_BACSU -            323     0.055   13.3   0.0   1   1   6.4e-05      0.13   12.0   0.0    59   100    94   134    66   155 0.85 THUMP domain
VIT1                 PF01988.14   213 sp|O34319|YKCC_BACSU -            323      0.06   12.8   0.0   1   1   4.3e-05     0.091   12.2   0.0   114   186   212   292   129   307 0.68 VIT family
NLPC_P60             PF00877.14   105 sp|O35010|YKFC_BACSU -            296     8e-30  102.7   0.0   1   1     2e-33   1.5e-29  101.9   0.0     1   105   185   292   185   292 0.97 NlpC/P60 family
SH3_3                PF08239.6     55 sp|O35010|YKFC_BACSU -            296     0.011   15.9   0.1   1   2   5.1e-06     0.038   14.1   0.2    17    50    56    95    50   100 0.86 Bacterial SH3 domain
ABC_tran             PF00005.22   137 sp|C0SP98|YKFD_BACSU -            329   2.5e-32  112.0   0.0   1   1   3.4e-35   3.6e-32  111.5   0.0     2   136    28   179    27   180 0.89 ABC transporter
oligo_HPY            PF08352.7     64 sp|C0SP98|YKFD_BACSU -            329   1.4e-17   63.8   0.5   1   1   2.2e-20   2.3e-17   63.0   0.5     1    64   231   298   231   298 0.95 Oligopeptide/dipeptide transporter, C-terminal region
AAA_21               PF13304.1    303 sp|C0SP98|YKFD_BACSU -            329   1.2e-08   35.3   0.0   1   2    0.0002      0.22   11.4   0.0     3    25    41    69    40   103 0.73 AAA domain
AAA_21               PF13304.1    303 sp|C0SP98|YKFD_BACSU -            329   1.2e-08   35.3   0.0   2   2   1.6e-07   0.00017   21.6   0.0   229   301   144   214   119   216 0.93 AAA domain
SMC_N                PF02463.14   220 sp|C0SP98|YKFD_BACSU -            329   4.9e-07   29.2   0.0   1   1   6.6e-10     7e-07   28.6   0.0    28   213    41   226    23   232 0.85 RecF/RecN/SMC N terminal domain
AAA_22               PF13401.1    131 sp|C0SP98|YKFD_BACSU -            329   2.8e-05   24.2   0.1   1   1   1.5e-06    0.0016   18.5   0.1     9    96    42   134    35   218 0.61 AAA domain
AAA_25               PF13481.1    194 sp|C0SP98|YKFD_BACSU -            329   0.00025   20.4   0.0   1   2   6.2e-05     0.066   12.6   0.0    25   156    26   139     2   148 0.65 AAA domain
DUF258               PF03193.11   161 sp|C0SP98|YKFD_BACSU -            329    0.0024   17.1   0.0   1   1   3.6e-06    0.0038   16.4   0.0    19    65    20    67     6    92 0.79 Protein of unknown function, DUF258
AAA_29               PF13555.1     62 sp|C0SP98|YKFD_BACSU -            329    0.0026   17.2   0.0   1   1   4.6e-06    0.0049   16.3   0.0    12    39    27    53    25    72 0.84 P-loop containing region of AAA domain
AAA_5                PF07728.9    139 sp|C0SP98|YKFD_BACSU -            329    0.0066   16.1   0.0   1   1   1.2e-05     0.013   15.2   0.0     4    74    42   134    39   138 0.79 AAA domain (dynein-related subfamily)
AAA_16               PF13191.1    185 sp|C0SP98|YKFD_BACSU -            329    0.0081   16.1   0.2   1   1   1.1e-05     0.012   15.5   0.2    19    55    32    68    18   208 0.81 AAA ATPase domain
AAA_18               PF13238.1    129 sp|C0SP98|YKFD_BACSU -            329     0.011   16.0   0.0   1   1   3.4e-05     0.036   14.3   0.0     3    40    42    89    41   139 0.59 AAA domain
AAA                  PF00004.24   132 sp|C0SP98|YKFD_BACSU -            329     0.014   15.5   0.0   1   1   7.6e-05      0.08   13.1   0.0     3    58    42   106    40   223 0.83 ATPase family associated with various cellular activities (AAA)
AAA_13               PF13166.1    712 sp|C0SP98|YKFD_BACSU -            329     0.016   13.6   0.1   2   2   0.00067      0.71    8.2   0.0   527   579   169   220   163   236 0.87 AAA domain
ATP-synt_ab          PF00006.20   215 sp|C0SP98|YKFD_BACSU -            329      0.14   11.6   0.0   1   1   0.00013      0.14   11.6   0.0     4    37    25    59    23   308 0.79 ATP synthase alpha/beta family, nucleotide-binding domain
Amidinotransf        PF02274.12   281 sp|O34497|YKGA_BACSU -            286   4.6e-55  186.6   0.0   1   1   1.4e-58   5.2e-55  186.5   0.0     1   281    26   284    26   284 0.94 Amidinotransferase
ATP-synt_ab          PF00006.20   215 sp|O34497|YKGA_BACSU -            286      0.13   11.6   0.0   1   2   0.00017      0.62    9.5   0.0    98   144    43    89    30   111 0.92 ATP synthase alpha/beta family, nucleotide-binding domain
TraT                 PF05818.7    215 sp|O34497|YKGA_BACSU -            286      0.15   11.4   0.0   1   2   0.00022       0.8    9.0   0.0    45    75   209   239   173   244 0.87 Enterobacterial TraT complement resistance protein
4HBT                 PF03061.17    79 sp|P49851|YKHA_BACSU -            172   1.4e-16   60.3   0.0   1   1   3.1e-20   2.3e-16   59.6   0.0     1    74    28   100    28   105 0.96 Thioesterase superfamily
4HBT_2               PF13279.1    121 sp|P49851|YKHA_BACSU -            172    0.0031   17.9   0.0   1   1   5.1e-07    0.0038   17.6   0.0    42   115    54   133    12   147 0.81 Thioesterase-like superfamily
DUF421               PF04239.7     99 sp|P49853|YKJA_BACSU -            243   2.5e-26   91.0   0.1   1   2   2.8e-25   4.2e-21   74.3   0.1     3    75    87   160    85   167 0.92 Protein of unknown function (DUF421)
DUF421               PF04239.7     99 sp|P49853|YKJA_BACSU -            243   2.5e-26   91.0   0.1   2   2   9.8e-07     0.014   14.8   0.0     8    63   168   225   165   236 0.86 Protein of unknown function (DUF421)
Multi_Drug_Res       PF00893.14    93 sp|P49856|YKKC_BACSU -            112   6.3e-25   87.4   7.1   1   1   1.7e-28   6.3e-25   87.4   6.5     1    92     1    89     1    92 0.96 Small Multidrug Resistance protein
EmrE                 PF13536.1    113 sp|P49856|YKKC_BACSU -            112   0.00089   19.4  11.0   1   1   5.6e-07    0.0021   18.2  11.0    31   105    22    98     1   105 0.80 Multidrug resistance efflux transporter
EamA                 PF00892.15   126 sp|P49856|YKKC_BACSU -            112    0.0084   16.1   9.0   1   1   4.1e-06     0.015   15.3   9.0    61   124    33    97     3    99 0.84 EamA-like transporter family
Multi_Drug_Res       PF00893.14    93 sp|P49857|YKKD_BACSU -            105     4e-30  104.1   5.6   1   1   2.8e-33   4.7e-30  103.9   5.6     2    93     3    94     2    94 0.99 Small Multidrug Resistance protein
EmrE                 PF13536.1    113 sp|P49857|YKKD_BACSU -            105     6e-08   32.8   6.5   1   1   6.9e-11   1.1e-07   31.9   6.5    27   102    23    99     1   103 0.83 Multidrug resistance efflux transporter
EamA                 PF00892.15   126 sp|P49857|YKKD_BACSU -            105   9.1e-05   22.5   5.0   1   1   6.8e-08   0.00011   22.2   5.0    48   124    25   101     2   103 0.79 EamA-like transporter family
7TMR-DISM_7TM        PF07695.6    205 sp|P49857|YKKD_BACSU -            105    0.0085   15.7   4.2   1   1   5.4e-06     0.009   15.7   4.2    69   168     6   101     1   105 0.61 7TM diverse intracellular signalling
DUF4131              PF13567.1    176 sp|P49857|YKKD_BACSU -            105      0.01   15.2   3.7   2   2   0.00026      0.43    9.9   0.2    15    54    61   100    54   104 0.57 Domain of unknown function (DUF4131)
DUF981               PF06168.6    191 sp|P49857|YKKD_BACSU -            105      0.05   13.3   4.1   1   1   3.5e-05     0.058   13.1   4.1    85   167    14    95     2   104 0.68 Protein of unknown function (DUF981)
MtN3_slv             PF03083.11    87 sp|P49857|YKKD_BACSU -            105     0.054   13.3   1.3   1   1   3.7e-05      0.06   13.2   0.9    16    80    15    79     1    86 0.78 Sugar efflux transporter for intercellular exchange
DUF543               PF04418.7     75 sp|P49857|YKKD_BACSU -            105     0.062   13.2   0.3   2   2   0.00011      0.18   11.8   0.1    31    57    62    93    58   101 0.85 Domain of unknown function (DUF543)
ABC_membrane         PF00664.18   275 sp|O31707|YKNU_BACSU -            585     7e-43  146.9  14.0   1   1   7.2e-46   9.7e-43  146.5  14.0     5   274    22   288    15   289 0.92 ABC transporter transmembrane region
ABC_tran             PF00005.22   137 sp|O31707|YKNU_BACSU -            585   9.4e-33  113.4   0.0   1   1   1.4e-35   1.8e-32  112.4   0.0     2   137   353   501   352   501 0.95 ABC transporter
SMC_N                PF02463.14   220 sp|O31707|YKNU_BACSU -            585   1.5e-05   24.3   0.5   2   2     2e-06    0.0026   17.0   0.0   136   209   472   541   390   549 0.77 RecF/RecN/SMC N terminal domain
AAA_16               PF13191.1    185 sp|O31707|YKNU_BACSU -            585    0.0048   16.9   0.0   1   1   7.8e-06     0.011   15.7   0.0     9   100   349   437   342   524 0.54 AAA ATPase domain
ABC_ATPase           PF09818.4    448 sp|O31707|YKNU_BACSU -            585     0.021   13.4   0.1   1   1   2.3e-05     0.031   12.8   0.1   299   368   448   517   437   543 0.76 Predicted ATPase of the ABC class
AAA_PrkA             PF08298.6    358 sp|O31707|YKNU_BACSU -            585     0.025   13.2   0.0   1   1   3.1e-05     0.042   12.5   0.0    88   145   362   420   352   435 0.86 PrkA AAA domain
AAA_17               PF13207.1    121 sp|O31707|YKNU_BACSU -            585     0.036   14.8   0.1   1   1   5.9e-05     0.079   13.7   0.1     1    26   364   393   364   551 0.83 AAA domain
AAA_18               PF13238.1    129 sp|O31707|YKNU_BACSU -            585      0.11   12.7   0.1   1   1   0.00021      0.28   11.4   0.1     1    19   365   383   365   434 0.85 AAA domain
AAA_29               PF13555.1     62 sp|O31707|YKNU_BACSU -            585      0.15   11.5   0.3   1   1   0.00027      0.36   10.3   0.3    22    39   361   378   353   383 0.83 P-loop containing region of AAA domain
Sterol-sensing       PF12349.3    153 sp|O31707|YKNU_BACSU -            585      0.69    9.3  10.3   2   2   5.7e-05     0.077   12.4   3.9     8    49   132   173   127   174 0.92 Sterol-sensing domain of SREBP cleavage-activation
ABC_membrane         PF00664.18   275 sp|O31708|YKNV_BACSU -            604   2.9e-40  138.4  14.9   1   1   6.1e-43   3.8e-40  138.0  14.9     3   272    47   314    45   317 0.95 ABC transporter transmembrane region
ABC_tran             PF00005.22   137 sp|O31708|YKNV_BACSU -            604   1.5e-31  109.5   0.0   1   1   5.3e-34   3.3e-31  108.4   0.0     1   137   379   528   379   528 0.91 ABC transporter
AAA_16               PF13191.1    185 sp|O31708|YKNV_BACSU -            604   3.2e-05   24.0   0.7   1   1   1.4e-07   8.9e-05   22.5   0.7    13   177   379   549   373   559 0.62 AAA ATPase domain
SMC_N                PF02463.14   220 sp|O31708|YKNV_BACSU -            604   0.00012   21.3   1.2   2   2   8.9e-06    0.0055   15.9   0.1   135   211   481   570   408   577 0.73 RecF/RecN/SMC N terminal domain
AAA_21               PF13304.1    303 sp|O31708|YKNV_BACSU -            604   0.00015   21.8   2.6   1   1   3.3e-06     0.002   18.1   0.7     3   275   393   535   391   555 0.72 AAA domain
GPDPase_memb         PF10110.4    149 sp|O31708|YKNV_BACSU -            604   0.00033   20.1   1.8   2   2   5.3e-07   0.00033   20.1   1.8    79   134   166   221   161   228 0.86 Membrane domain of glycerophosphoryl diester phosphodiesterase
AAA_17               PF13207.1    121 sp|O31708|YKNV_BACSU -            604   0.00045   21.0   0.1   1   1   2.7e-06    0.0016   19.2   0.1     3    32   393   424   391   550 0.75 AAA domain
AAA                  PF00004.24   132 sp|O31708|YKNV_BACSU -            604   0.00055   20.1   0.2   1   1   6.2e-06    0.0038   17.4   0.2     2    98   393   551   392   572 0.82 ATPase family associated with various cellular activities (AAA)
T2SE                 PF00437.15   272 sp|O31708|YKNV_BACSU -            604    0.0024   16.8   0.0   1   1   1.1e-05    0.0071   15.2   0.0    85   153   345   414   338   422 0.85 Type II/IV secretion system protein
AAA_19               PF13245.1     76 sp|O31708|YKNV_BACSU -            604    0.0033   17.1   0.2   1   1   1.4e-05    0.0084   15.8   0.2    10    37   389   415   380   423 0.81 Part of AAA domain
AAA_22               PF13401.1    131 sp|O31708|YKNV_BACSU -            604     0.005   16.9   0.2   1   1   8.6e-05     0.053   13.6   0.2     7   108   392   545   388   559 0.70 AAA domain
DUF258               PF03193.11   161 sp|O31708|YKNV_BACSU -            604      0.01   14.9   0.0   1   1   3.8e-05     0.023   13.8   0.0    16    66   368   420   354   425 0.77 Protein of unknown function, DUF258
Zeta_toxin           PF06414.7    201 sp|O31708|YKNV_BACSU -            604     0.013   14.5   0.1   1   1   5.6e-05     0.034   13.2   0.1    21    50   394   424   390   430 0.92 Zeta toxin
AAA_29               PF13555.1     62 sp|O31708|YKNV_BACSU -            604     0.014   14.9   0.2   1   1   6.5e-05      0.04   13.4   0.2    15    39   382   405   377   410 0.80 P-loop containing region of AAA domain
AAA_25               PF13481.1    194 sp|O31708|YKNV_BACSU -            604     0.016   14.6   0.2   1   2   0.00047      0.29   10.5   0.0    29    50   385   406   360   419 0.78 AAA domain
AAA_18               PF13238.1    129 sp|O31708|YKNV_BACSU -            604     0.034   14.4   0.5   1   1   0.00021      0.13   12.5   0.0     2    23   393   424   392   500 0.71 AAA domain
AAA_5                PF07728.9    139 sp|O31708|YKNV_BACSU -            604     0.037   13.7   0.5   1   2   0.00072      0.45   10.2   0.0     3    25   393   415   391   477 0.84 AAA domain (dynein-related subfamily)
AAA_10               PF12846.2    304 sp|O31708|YKNV_BACSU -            604      0.04   13.3   1.1   1   1   0.00079      0.49    9.7   1.1     4    32   392   420   389   578 0.68 AAA-like domain
IstB_IS21            PF01695.12   178 sp|O31708|YKNV_BACSU -            604     0.054   12.9   0.1   1   1   0.00047      0.29   10.5   0.0    16    65   357   407   347   418 0.82 IstB-like ATP binding protein
AAA_30               PF13604.1    196 sp|O31708|YKNV_BACSU -            604     0.059   12.9   0.2   1   1   0.00024      0.15   11.6   0.2    20    50   391   421   375   547 0.77 AAA domain
SbcCD_C              PF13558.1     90 sp|O31708|YKNV_BACSU -            604      0.13   12.1   0.2   1   1    0.0011      0.67    9.9   0.2    48    87   502   541   480   545 0.68 Putative exonuclease SbcCD, C subunit
FAST_2               PF08368.7     93 sp|O31708|YKNV_BACSU -            604      0.15   12.4   0.0   1   1   0.00082       0.5   10.7   0.0    42    88   527   573   514   576 0.87 FAST kinase-like protein, subdomain 2
AAA_23               PF13476.1    202 sp|O31708|YKNV_BACSU -            604      0.37   11.0   4.2   1   1   0.00036      0.22   11.8   0.8    23    39   393   409   364   412 0.84 AAA domain
HlyD_2               PF12700.2    328 sp|O31710|YKNX_BACSU -            377   6.5e-25   87.9  29.0   1   1   6.7e-28   8.2e-25   87.6  29.0     2   328    42   363    41   363 0.78 HlyD family secretion protein
HlyD_3               PF13437.1    105 sp|O31710|YKNX_BACSU -            377   2.3e-07   31.1  10.7   2   3   2.6e-10   3.2e-07   30.6   1.6     2   100   184   290   183   298 0.81 HlyD family secretion protein
Biotin_lipoyl_2      PF13533.1     50 sp|O31710|YKNX_BACSU -            377     1e-05   25.1   2.4   1   2   8.1e-09     1e-05   25.1   2.4    11    46    72   107    71   125 0.92 Biotin-lipoyl like
HlyD                 PF00529.15   305 sp|O31710|YKNX_BACSU -            377   9.2e-05   21.8  20.6   1   2   1.5e-06    0.0018   17.6  16.1    10   139    72   179    71   207 0.53 HlyD family secretion protein
Biotin_lipoyl        PF00364.17    74 sp|O31710|YKNX_BACSU -            377    0.0032   17.0   5.2   1   3   1.1e-05     0.014   15.0   0.0    50    73    70    93    63    94 0.85 Biotin-requiring enzyme
Peptidase_M23        PF01551.17    96 sp|O31710|YKNX_BACSU -            377    0.0048   16.9   0.6   1   2   0.00045      0.56   10.2   0.1    50    76    72    98    27   118 0.77 Peptidase family M23
SH3_2                PF07653.12    55 sp|O31710|YKNX_BACSU -            377     0.023   14.1   0.2   1   1   6.7e-05     0.083   12.3   0.0    15    49   229   263   213   265 0.85 Variant SH3 domain
Mnd1                 PF03962.10   188 sp|O31710|YKNX_BACSU -            377      0.11   12.2  14.6   1   1   0.00018      0.22   11.1  14.6    66   145   112   193    84   211 0.79 Mnd1 family
DUF3139              PF11337.3     85 sp|O31710|YKNX_BACSU -            377      0.23   11.7   0.1   1   1   0.00019      0.23   11.7   0.1     1    69     1    67     1    88 0.75 Protein of unknown function (DUF3139)
ABC_tran             PF00005.22   137 sp|O31711|YKNY_BACSU -            230   2.6e-35  121.6   0.0   1   1     4e-38   3.5e-35  121.2   0.0     1   136    21   169    21   170 0.92 ABC transporter
AAA_21               PF13304.1    303 sp|O31711|YKNY_BACSU -            230   8.3e-12   45.6   0.0   1   2     1e-05    0.0089   16.0   0.1     4    24    36    56    34    86 0.74 AAA domain
AAA_21               PF13304.1    303 sp|O31711|YKNY_BACSU -            230   8.3e-12   45.6   0.0   2   2     3e-09   2.7e-06   27.5   0.0   235   301   140   203    99   205 0.93 AAA domain
SMC_N                PF02463.14   220 sp|O31711|YKNY_BACSU -            230   4.2e-06   26.1   0.6   1   1   6.1e-08   5.3e-05   22.5   0.6    25   212    32   214    13   218 0.72 RecF/RecN/SMC N terminal domain
AAA_29               PF13555.1     62 sp|O31711|YKNY_BACSU -            230   3.5e-05   23.2   0.0   1   1   7.5e-08   6.5e-05   22.3   0.0    11    40    17    48    14    59 0.81 P-loop containing region of AAA domain
DUF258               PF03193.11   161 sp|O31711|YKNY_BACSU -            230    0.0025   17.0   0.0   1   1   4.7e-06    0.0041   16.3   0.0    26    55    21    51     3    84 0.80 Protein of unknown function, DUF258
AAA_10               PF12846.2    304 sp|O31711|YKNY_BACSU -            230    0.0026   17.2   0.2   1   2   6.3e-05     0.055   12.9   0.0     6    22    36    52    32    64 0.82 AAA-like domain
APS_kinase           PF01583.15   157 sp|O31711|YKNY_BACSU -            230      0.01   15.5   0.0   1   1   2.3e-05      0.02   14.5   0.0     3    50    32    78    30    93 0.86 Adenylylsulphate kinase
AAA_23               PF13476.1    202 sp|O31711|YKNY_BACSU -            230     0.011   16.1   0.3   1   1     3e-05     0.026   14.8   0.0    14    39    25    51     2    54 0.73 AAA domain
MMR_HSR1             PF01926.18   116 sp|O31711|YKNY_BACSU -            230     0.012   15.5   0.0   1   1   3.4e-05      0.03   14.2   0.0     2   104    34   156    33   196 0.66 50S ribosome-binding GTPase
AAA_16               PF13191.1    185 sp|O31711|YKNY_BACSU -            230     0.022   14.7   0.0   1   1   4.9e-05     0.043   13.8   0.0    18    42    25    49    15   106 0.85 AAA ATPase domain
AAA_22               PF13401.1    131 sp|O31711|YKNY_BACSU -            230     0.027   14.6   0.1   1   2   0.00085      0.75    9.9   0.0     7    22    34    49    28    56 0.86 AAA domain
AAA_17               PF13207.1    121 sp|O31711|YKNY_BACSU -            230      0.03   15.1   0.4   1   1   6.6e-05     0.057   14.2   0.3     4    19    36    51    34   129 0.93 AAA domain
SbcCD_C              PF13558.1     90 sp|O31711|YKNY_BACSU -            230      0.03   14.2   0.1   1   1   0.00037      0.32   10.9   0.1    28    88   137   184   118   186 0.75 Putative exonuclease SbcCD, C subunit
AAA_18               PF13238.1    129 sp|O31711|YKNY_BACSU -            230     0.042   14.1   0.2   1   1   0.00017      0.15   12.3   0.2     1    18    34    51    34   214 0.88 AAA domain
AAA_15               PF13175.1    415 sp|O31711|YKNY_BACSU -            230      0.15   11.1   0.0   1   2   0.00043      0.37    9.7   0.0    22    43    22    68     5   130 0.62 AAA ATPase domain
MacB_PCD             PF12704.2    232 sp|O31712|YKNZ_BACSU -            397   1.8e-49  168.4   2.4   1   2   3.6e-53   1.8e-49  168.4   2.4     1   231    10   240    10   241 0.92 MacB-like periplasmic core domain
FtsX                 PF02687.16   121 sp|O31712|YKNZ_BACSU -            397   2.3e-24   85.4  14.2   2   2   1.2e-26   5.8e-23   80.9  10.5     3   121   278   390   276   390 0.97 FtsX-like permease family
CbiQ                 PF02361.11   224 sp|O34572|YKOC_BACSU -            254   1.1e-48  165.7   3.3   1   2   1.5e-52   1.1e-48  165.7   3.3     2   224     2   222     1   222 0.99 Cobalt transport protein
DUF3040              PF11239.3     82 sp|O34572|YKOC_BACSU -            254       7.9    6.6   7.0   1   3     7e-05      0.52   10.3   0.4    46    81    37    71    27    72 0.88 Protein of unknown function (DUF3040)
ABC_tran             PF00005.22   137 sp|O34362|YKOD_BACSU -            547   2.6e-67  225.3   0.0   1   2     1e-33   3.4e-31  108.3   0.0     2   137    26   177    25   177 0.97 ABC transporter
ABC_tran             PF00005.22   137 sp|O34362|YKOD_BACSU -            547   2.6e-67  225.3   0.0   2   2   8.6e-36   2.9e-33  115.0   0.0     2   136   311   451   310   452 0.94 ABC transporter
AAA_21               PF13304.1    303 sp|O34362|YKOD_BACSU -            547   7.4e-25   88.4   0.4   1   2   2.8e-08   9.3e-06   25.8   0.4     3   287    39   196    37   205 0.87 AAA domain
AAA_21               PF13304.1    303 sp|O34362|YKOD_BACSU -            547   7.4e-25   88.4   0.4   2   2     5e-15   1.7e-12   47.9   0.0     1   302   322   486   322   487 0.85 AAA domain
DUF258               PF03193.11   161 sp|O34362|YKOD_BACSU -            547   1.2e-10   40.7   0.1   1   2   2.2e-06   0.00072   18.7   0.0    19    58    18    58     3   152 0.81 Protein of unknown function, DUF258
DUF258               PF03193.11   161 sp|O34362|YKOD_BACSU -            547   1.2e-10   40.7   0.1   2   2   1.1e-06   0.00038   19.6   0.0    18    65   302   350   286   369 0.84 Protein of unknown function, DUF258
AAA_29               PF13555.1     62 sp|O34362|YKOD_BACSU -            547   1.4e-10   40.5   0.1   1   2   7.1e-05     0.024   14.1   0.0    12    39    25    51    24    54 0.84 P-loop containing region of AAA domain
AAA_29               PF13555.1     62 sp|O34362|YKOD_BACSU -            547   1.4e-10   40.5   0.1   2   2   8.6e-08   2.8e-05   23.5   0.1    15    51   313   348   308   354 0.83 P-loop containing region of AAA domain
SMC_N                PF02463.14   220 sp|O34362|YKOD_BACSU -            547   1.4e-10   40.7   3.5   1   2   1.3e-07   4.3e-05   22.8   0.2    26   197    37   207    24   214 0.59 RecF/RecN/SMC N terminal domain
SMC_N                PF02463.14   220 sp|O34362|YKOD_BACSU -            547   1.4e-10   40.7   3.5   2   2   2.5e-05    0.0082   15.3   0.3    24   205   320   489   308   500 0.60 RecF/RecN/SMC N terminal domain
AAA_16               PF13191.1    185 sp|O34362|YKOD_BACSU -            547   2.1e-10   40.8   0.7   1   2   2.4e-06    0.0008   19.4   0.1    22    63    33    80    24   205 0.68 AAA ATPase domain
AAA_16               PF13191.1    185 sp|O34362|YKOD_BACSU -            547   2.1e-10   40.8   0.7   2   2   2.8e-06   0.00092   19.2   0.0    19   135   315   433   305   504 0.62 AAA ATPase domain
AAA_25               PF13481.1    194 sp|O34362|YKOD_BACSU -            547   3.4e-09   36.4   2.2   1   2   0.00016     0.052   12.9   0.1    30    55    32    57     6   208 0.63 AAA domain
AAA_25               PF13481.1    194 sp|O34362|YKOD_BACSU -            547   3.4e-09   36.4   2.2   2   2   2.7e-06   0.00088   18.7   0.5    30   107   317   384   306   482 0.56 AAA domain
AAA_23               PF13476.1    202 sp|O34362|YKOD_BACSU -            547     2e-08   34.8   0.1   1   2     0.002      0.65   10.2   0.1    10    39    25    55    16   248 0.85 AAA domain
AAA_23               PF13476.1    202 sp|O34362|YKOD_BACSU -            547     2e-08   34.8   0.1   2   2   4.9e-07   0.00016   22.0   0.0    10    42   310   343   306   409 0.82 AAA domain
AAA_22               PF13401.1    131 sp|O34362|YKOD_BACSU -            547   4.2e-08   33.3   1.3   1   2   2.3e-05    0.0074   16.4   0.1     3   122    34   205    31   212 0.63 AAA domain
AAA_22               PF13401.1    131 sp|O34362|YKOD_BACSU -            547   4.2e-08   33.3   1.3   2   2   0.00013     0.042   13.9   0.2     3    76   319   408   317   487 0.61 AAA domain
SbcCD_C              PF13558.1     90 sp|O34362|YKOD_BACSU -            547   3.7e-07   29.9   0.6   1   2   4.7e-05     0.016   15.1   0.2    27    89   143   192   130   193 0.84 Putative exonuclease SbcCD, C subunit
SbcCD_C              PF13558.1     90 sp|O34362|YKOD_BACSU -            547   3.7e-07   29.9   0.6   2   2    0.0027      0.88    9.5   0.0    63    89   441   467   421   468 0.85 Putative exonuclease SbcCD, C subunit
IstB_IS21            PF01695.12   178 sp|O34362|YKOD_BACSU -            547   1.1e-06   28.1   0.3   1   3   2.4e-05     0.008   15.6   0.0    44    67    32    55     9    77 0.83 IstB-like ATP binding protein
AAA_5                PF07728.9    139 sp|O34362|YKOD_BACSU -            547   1.2e-06   28.2   0.1   1   2   0.00057      0.19   11.4   0.0     2    22    38    58    37    70 0.86 AAA domain (dynein-related subfamily)
AAA_5                PF07728.9    139 sp|O34362|YKOD_BACSU -            547   1.2e-06   28.2   0.1   2   2   8.4e-05     0.028   14.1   0.0     4    45   325   370   323   394 0.80 AAA domain (dynein-related subfamily)
Arch_ATPase          PF01637.13   234 sp|O34362|YKOD_BACSU -            547   4.3e-06   26.5   0.0   2   2   1.8e-05    0.0059   16.3   0.0    20    84   320   388   310   429 0.77 Archaeal ATPase
Mg_chelatase         PF01078.16   207 sp|O34362|YKOD_BACSU -            547     9e-06   24.9   0.0   1   2   0.00013     0.042   12.9   0.0    25    49    38    62    33   100 0.92 Magnesium chelatase, subunit ChlI
Mg_chelatase         PF01078.16   207 sp|O34362|YKOD_BACSU -            547     9e-06   24.9   0.0   2   2    0.0016      0.54    9.3   0.0    26    55   324   353   300   386 0.74 Magnesium chelatase, subunit ChlI
AAA_19               PF13245.1     76 sp|O34362|YKOD_BACSU -            547   7.1e-05   22.4   0.0   2   2   8.9e-05     0.029   14.0   0.0     9    46   319   352   313   381 0.79 Part of AAA domain
AAA_30               PF13604.1    196 sp|O34362|YKOD_BACSU -            547   8.3e-05   22.2   0.0   2   2   4.1e-06    0.0013   18.3   0.0     3   104   303   452   301   487 0.63 AAA domain
AAA_17               PF13207.1    121 sp|O34362|YKOD_BACSU -            547   0.00012   22.8   0.1   2   2   0.00067      0.22   12.3   0.0     3    32   324   356   323   427 0.74 AAA domain
RNA_helicase         PF00910.17   107 sp|O34362|YKOD_BACSU -            547   0.00017   21.7   0.0   2   2    0.0021       0.7   10.0   0.0     3    26   325   348   323   391 0.70 RNA helicase
AAA_28               PF13521.1    163 sp|O34362|YKOD_BACSU -            547   0.00018   21.5   0.0   2   2   0.00046      0.15   11.9   0.0     3    43   324   370   322   410 0.70 AAA domain
PhoH                 PF02562.11   205 sp|O34362|YKOD_BACSU -            547   0.00019   20.7   0.1   2   2    0.0013      0.42    9.7   0.0     9    43   306   345   300   406 0.72 PhoH-like protein
NACHT                PF05729.7    166 sp|O34362|YKOD_BACSU -            547   0.00021   20.9   0.4   2   2   0.00064      0.21   11.2   0.1     2    25   322   345   321   412 0.94 NACHT domain
AAA_33               PF13671.1    143 sp|O34362|YKOD_BACSU -            547   0.00021   21.1   1.1   2   2   0.00031       0.1   12.4   0.1     1    33   322   366   322   485 0.66 AAA domain
AAA                  PF00004.24   132 sp|O34362|YKOD_BACSU -            547   0.00028   21.1   4.0   2   2   0.00066      0.22   11.7   0.3     3    24   325   346   323   488 0.81 ATPase family associated with various cellular activities (AAA)
AAA_15               PF13175.1    415 sp|O34362|YKOD_BACSU -            547   0.00089   18.4   0.2   1   1   5.2e-05     0.017   14.1   0.0    12    43   310   362   274   407 0.77 AAA ATPase domain
AAA_18               PF13238.1    129 sp|O34362|YKOD_BACSU -            547    0.0015   18.8   0.0   2   2     0.001      0.34   11.2   0.0     3    32   325   369   324   423 0.69 AAA domain
ATP-synt_ab          PF00006.20   215 sp|O34362|YKOD_BACSU -            547    0.0018   17.8   0.1   2   2    0.0017      0.57    9.6   0.0     7    63   312   466   305   525 0.65 ATP synthase alpha/beta family, nucleotide-binding domain
SRP54                PF00448.17   196 sp|O34362|YKOD_BACSU -            547     0.008   15.6   0.2   1   1   0.00012     0.039   13.3   0.1     4    34   323   353   320   356 0.91 SRP54-type protein, GTPase domain
MobB                 PF03205.9    140 sp|O34362|YKOD_BACSU -            547     0.015   15.0   0.0   2   2   0.00078      0.26   10.9   0.0     4    28   324   348   321   356 0.83 Molybdopterin guanine dinucleotide synthesis protein B
T2SE                 PF00437.15   272 sp|O34362|YKOD_BACSU -            547     0.061   12.2   0.0   2   2    0.0025      0.84    8.4   0.0   125   161   317   353   284   364 0.75 Type II/IV secretion system protein
PIF1                 PF05970.9    364 sp|O34362|YKOD_BACSU -            547      0.08   11.8   0.0   2   2    0.0021      0.68    8.8   0.0     4    53   304   351   301   354 0.87 PIF1-like helicase
MGDG_synth           PF06925.6    169 sp|C0SPB9|YKON_BACSU -            373   7.6e-48  162.5   0.4   1   1   2.5e-51   1.8e-47  161.3   0.4     1   169    16   179    16   179 0.98 Monogalactosyldiacylglycerol (MGDG) synthase
Epimerase_2          PF02350.14   346 sp|C0SPB9|YKON_BACSU -            373   2.9e-05   23.0   0.1   1   3   2.1e-08   0.00016   20.6   0.0   124   164   149   189   141   200 0.89 UDP-N-acetylglucosamine 2-epimerase
Metallophos_2        PF12850.2    156 sp|O35040|YKOQ_BACSU -            270   2.5e-10   40.4   0.5   1   1   2.3e-14   3.4e-10   39.9   0.5     2   139    47   229    46   246 0.65 Calcineurin-like phosphoesterase superfamily domain
Glycos_transf_2      PF00535.21   169 sp|O34755|YKOT_BACSU -            337   1.5e-26   93.0   0.2   1   1   5.7e-30   2.1e-26   92.5   0.2     1   168     9   179     9   180 0.91 Glycosyl transferase family 2
Glyco_tranf_2_3      PF13641.1    228 sp|O34755|YKOT_BACSU -            337   0.00033   20.5   0.0   1   1   1.2e-07   0.00044   20.1   0.0     3   141     8   151     5   174 0.79 Glycosyltransferase like family 2
DctM                 PF06808.7    416 sp|O34755|YKOT_BACSU -            337     0.016   13.8   0.7   1   1   5.9e-06     0.022   13.3   0.7    44    97   224   277   179   285 0.78 DctM-like transporters
Glyco_tranf_2_4      PF13704.1     97 sp|O34755|YKOT_BACSU -            337       0.1   12.9   0.0   1   1   5.9e-05      0.22   11.8   0.0    21    81    46   107    36   107 0.76 Glycosyl transferase family 2
SNARE_assoc          PF09335.6    123 sp|O34908|YKOX_BACSU -            221   5.8e-23   81.4   5.8   1   2   3.9e-27   5.8e-23   81.4   5.8     1   121    41   166    41   168 0.93 SNARE associated Golgi protein
TerC                 PF03741.11   184 sp|O34997|YKOY_BACSU -            324   5.2e-52  175.9   7.7   1   2     7e-56   5.2e-52  175.9   7.7     2   182    75   263    74   265 0.97 Integral membrane protein TerC family
DUF2215              PF10225.4    249 sp|O34997|YKOY_BACSU -            324       1.6    8.1   7.7   1   2   6.9e-05      0.51    9.7   0.4    52   136    89   177    81   207 0.74 Uncharacterized conserved protein (DUF2215)
ABC_tran             PF00005.22   137 sp|O31716|YKPA_BACSU -            540   5.4e-40  136.8   0.0   1   2   1.4e-25   1.8e-22   80.1   0.0     2   137    18   184    17   184 0.80 ABC transporter
ABC_tran             PF00005.22   137 sp|O31716|YKPA_BACSU -            540   5.4e-40  136.8   0.0   2   2     2e-17   2.5e-14   53.7   0.0     1   137   335   468   335   468 0.85 ABC transporter
ABC_tran_2           PF12848.2     85 sp|O31716|YKPA_BACSU -            540     1e-19   70.1   3.0   1   1   1.6e-22     2e-19   69.1   3.0     2    83   224   307   223   309 0.91 ABC transporter
AAA_21               PF13304.1    303 sp|O31716|YKPA_BACSU -            540   1.4e-13   51.5  13.9   1   2   1.1e-11   1.4e-08   35.1   4.3     3   303    31   216    29   216 0.73 AAA domain
AAA_21               PF13304.1    303 sp|O31716|YKPA_BACSU -            540   1.4e-13   51.5  13.9   2   2   9.8e-06     0.012   15.5   2.0   150   298   243   495   221   500 0.73 AAA domain
SMC_N                PF02463.14   220 sp|O31716|YKPA_BACSU -            540   3.3e-07   29.7   0.1   3   3   3.7e-05     0.046   12.9   0.0   135   213   297   511   224   516 0.73 RecF/RecN/SMC N terminal domain
AAA_15               PF13175.1    415 sp|O31716|YKPA_BACSU -            540   4.1e-06   26.1   7.5   1   4   0.00014      0.17   10.8   0.0    10    76    15    92    11   133 0.75 AAA ATPase domain
AAA_15               PF13175.1    415 sp|O31716|YKPA_BACSU -            540   4.1e-06   26.1   7.5   2   4   2.8e-05     0.034   13.1   0.1   366   415   173   215   165   215 0.89 AAA ATPase domain
AAA_29               PF13555.1     62 sp|O31716|YKPA_BACSU -            540    0.0025   17.2   0.0   1   1   6.3e-06    0.0078   15.7   0.0    11    40    16    44     8    49 0.84 P-loop containing region of AAA domain
DUF258               PF03193.11   161 sp|O31716|YKPA_BACSU -            540    0.0048   16.1   0.0   1   1   8.8e-06     0.011   14.9   0.0    22    68    13    60     2    64 0.80 Protein of unknown function, DUF258
Miro                 PF08477.8    119 sp|O31716|YKPA_BACSU -            540     0.012   16.1   0.1   1   1   3.6e-05     0.045   14.2   0.0     4    91    32   116    30   140 0.59 Miro-like protein
AAA_17               PF13207.1    121 sp|O31716|YKPA_BACSU -            540     0.039   14.7   0.4   1   1   9.9e-05      0.12   13.1   0.3     1    32    29    64    29   293 0.79 AAA domain
KAP_NTPase           PF07693.9    325 sp|O31716|YKPA_BACSU -            540     0.044   12.7   0.1   1   1   0.00013      0.16   10.9   0.1    16    48    23   228    15   375 0.69 KAP family P-loop domain
ApbA                 PF02558.11   151 sp|O31717|YKPB_BACSU -            303     2e-40  137.7   0.1   1   1   1.3e-43   2.7e-40  137.2   0.1     2   150     4   150     3   151 0.97 Ketopantoate reductase PanE/ApbA
ApbA_C               PF08546.6    125 sp|O31717|YKPB_BACSU -            303   8.5e-25   87.1   0.0   1   1   5.7e-28   1.2e-24   86.6   0.0     2   125   177   300   176   300 0.96 Ketopantoate reductase PanE/ApbA C terminal
NAD_Gly3P_dh_N       PF01210.18   157 sp|O31717|YKPB_BACSU -            303   0.00079   19.1   0.0   1   1   6.1e-07    0.0013   18.4   0.0     3   112     4   108     2   128 0.84 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus
F420_oxidored        PF03807.12    96 sp|O31717|YKPB_BACSU -            303     0.004   17.5   0.5   1   1   5.5e-06     0.012   16.0   0.5     4    95     5   101     2   102 0.81 NADP oxidoreductase coenzyme F420-dependent
TrkA_N               PF02254.13   116 sp|O31717|YKPB_BACSU -            303    0.0058   16.6   0.1   1   1   5.6e-06     0.012   15.6   0.1     1    72     3    76     3    83 0.82 TrkA-N domain
Epimerase            PF01370.16   236 sp|O31717|YKPB_BACSU -            303     0.019   14.3   0.0   1   1   1.6e-05     0.033   13.6   0.0     2    74     4    75     3    96 0.85 NAD dependent epimerase/dehydratase family
NAD_binding_10       PF13460.1    183 sp|O31717|YKPB_BACSU -            303       0.1   12.5   0.0   1   1   9.7e-05       0.2   11.6   0.0     2    69     4    75     3   117 0.74 NADH(P)-binding
AIG2                 PF06094.7    102 sp|P39759|YKQA_BACSU -            277     6e-21   74.8   2.6   1   2   1.1e-19   8.1e-16   58.3   0.1     1   102     5   100     5   100 0.95 AIG2-like family
AIG2                 PF06094.7    102 sp|P39759|YKQA_BACSU -            277     6e-21   74.8   2.6   2   2   9.1e-07    0.0067   16.8   0.3     1   100   130   233   130   235 0.81 AIG2-like family
AIG2_2               PF13772.1     83 sp|P39759|YKQA_BACSU -            277   3.6e-08   33.4   0.1   2   2   2.6e-11   1.9e-07   31.0   0.0     3    71   187   256   185   267 0.88 AIG2-like family
Hydrolase_3          PF08282.7    254 sp|Q45494|YKRA_BACSU -            257   3.1e-58  197.3   0.0   1   1   1.5e-61   3.6e-58  197.1   0.0     1   253     6   249     6   250 0.95 haloacid dehalogenase-like hydrolase
Hydrolase            PF00702.21   215 sp|Q45494|YKRA_BACSU -            257   3.5e-12   47.1   0.0   1   1   2.2e-13   5.3e-10   40.0   0.0     2   214     4   217     3   218 0.71 haloacid dehalogenase-like hydrolase
HAD                  PF12710.2    192 sp|Q45494|YKRA_BACSU -            257   1.2e-11   45.0   0.3   2   2   5.5e-12   1.4e-08   35.1   0.0    95   191    26   214    19   215 0.85 haloacid dehalogenase-like hydrolase
S6PP                 PF05116.8    247 sp|Q45494|YKRA_BACSU -            257   1.6e-11   44.0   0.0   1   2     2e-06    0.0051   16.1   0.0     3    58     4    59     2    61 0.94 Sucrose-6F-phosphate phosphohydrolase
S6PP                 PF05116.8    247 sp|Q45494|YKRA_BACSU -            257   1.6e-11   44.0   0.0   2   2   2.3e-09   5.7e-06   25.7   0.0   156   215   173   231   164   253 0.87 Sucrose-6F-phosphate phosphohydrolase
HAD_2                PF13419.1    176 sp|Q45494|YKRA_BACSU -            257   0.00037   20.7   0.5   1   3   0.00032      0.78    9.9   0.2     1    25     6    30     6    31 0.90 Haloacid dehalogenase-like hydrolase
HAD_2                PF13419.1    176 sp|Q45494|YKRA_BACSU -            257   0.00037   20.7   0.5   2   3   0.00026      0.64   10.2   0.0    80   154    23   102    20   122 0.71 Haloacid dehalogenase-like hydrolase
Hydrolase_6          PF13344.1    101 sp|Q45494|YKRA_BACSU -            257   0.00043   20.1   0.0   1   1   4.5e-07    0.0011   18.7   0.0     1    91     6   108     6   117 0.71 Haloacid dehalogenase-like hydrolase
Acyl_transf_3        PF01757.17   340 sp|O31660|YKRP_BACSU -            340   1.6e-25   89.6  40.4   1   1   1.4e-29   2.1e-25   89.3  40.4     2   335     7   303     6   309 0.85 Acyltransferase family
UPF0223              PF05256.7     88 sp|Q45497|YKTA_BACSU -             88   1.9e-39  133.6   2.0   1   1   1.4e-43     2e-39  133.5   2.0     1    88     1    88     1    88 0.99 Uncharacterised protein family (UPF0223)
DUF1054              PF06335.7    194 sp|Q45498|YKTB_BACSU -            212   5.1e-83  277.5   0.7   1   1   7.7e-87   5.7e-83  277.3   0.7     1   194     6   203     6   203 0.99 Protein of unknown function (DUF1054)
Nefa_Nip30_N         PF10187.4    102 sp|Q45498|YKTB_BACSU -            212     0.014   15.5   0.5   1   1   3.2e-06     0.024   14.8   0.5    17    81   134   194   119   200 0.83 N-terminal domain of NEFA-interacting nuclear protein NIP30
LCM                  PF04072.9    183 sp|Q45500|YKTD_BACSU -            304   8.7e-40  136.2   0.0   1   1   8.5e-44   1.3e-39  135.7   0.0     2   182    11   206    10   207 0.92 Leucine carboxyl methyltransferase
MFS_1                PF07690.11   352 sp|O31695|YKUC_BACSU -            430   1.3e-31  109.5  60.1   1   2     1e-30   5.2e-27   94.4  33.7     1   341    12   356    12   366 0.76 Major Facilitator Superfamily
MFS_1                PF07690.11   352 sp|O31695|YKUC_BACSU -            430   1.3e-31  109.5  60.1   2   2   8.5e-11   4.2e-07   29.0  18.3    27   182   252   410   252   429 0.79 Major Facilitator Superfamily
MFS_3                PF05977.8    524 sp|O31695|YKUC_BACSU -            430   5.1e-13   47.9   8.3   1   1   1.4e-16   6.7e-13   47.5   8.3     7   320     4   327     2   368 0.82 Transmembrane secretion effector
MFS_2                PF13347.1    428 sp|O31695|YKUC_BACSU -            430   5.7e-11   41.4  36.5   1   3   2.4e-11   1.2e-07   30.5   9.7   220   376     2   157     1   163 0.84 MFS/sugar transport protein
MFS_2                PF13347.1    428 sp|O31695|YKUC_BACSU -            430   5.7e-11   41.4  36.5   2   3   2.2e-08   0.00011   20.7  11.1   207   377   205   373   164   383 0.80 MFS/sugar transport protein
YkuD                 PF03734.9    144 sp|O34816|YKUD_BACSU -            164   1.3e-20   74.1   0.1   1   1   3.9e-24   1.9e-20   73.5   0.1     1   144    55   162    55   162 0.88 L,D-transpeptidase catalytic domain
LysM                 PF01476.15    44 sp|O34816|YKUD_BACSU -            164   1.6e-10   40.6   0.0   1   2   1.3e-13   6.3e-10   38.7   0.0     1    44     4    46     4    46 0.98 LysM domain
Phage_tail_X         PF05489.7     60 sp|O34816|YKUD_BACSU -            164    0.0013   18.1   0.1   1   2   4.6e-06     0.023   14.1   0.1     6    52     6    46     1    56 0.81 Phage Tail Protein X
Metallophos          PF00149.23   200 sp|O34870|YKUE_BACSU -            286   1.6e-10   40.7   3.0   1   1   1.1e-12   3.2e-09   36.4   3.0     1    95    58   151    58   225 0.79 Calcineurin-like phosphoesterase
Metallophos_2        PF12850.2    156 sp|O34870|YKUE_BACSU -            286   1.4e-08   34.7   0.0   1   1   6.9e-12     2e-08   34.1   0.0     2   124    59   228    58   261 0.66 Calcineurin-like phosphoesterase superfamily domain
TAT_signal           PF10518.4     26 sp|O34870|YKUE_BACSU -            286    0.0012   18.7   4.8   1   1   1.1e-06    0.0032   17.3   4.8     1    24     3    26     3    27 0.86 TAT (twin-arginine translocation) pathway signal sequence
CytB6-F_Fe-S         PF08802.5     39 sp|O34870|YKUE_BACSU -            286    0.0043   17.0   0.3   1   1     3e-06    0.0088   16.0   0.3     6    37     4    36     3    37 0.74 Cytochrome B6-F complex Fe-S subunit
DNA_pol_E_B          PF04042.11   209 sp|O34870|YKUE_BACSU -            286      0.02   14.1   0.0   1   1   9.6e-06     0.028   13.6   0.0     1    53    60   110    60   125 0.88 DNA polymerase alpha/epsilon subunit B
UPF0180              PF03698.8     80 sp|O34783|YKUS_BACSU -             81   1.7e-36  123.9   1.2   1   1   2.6e-40   1.9e-36  123.7   1.2     2    80     3    81     2    81 0.98 Uncharacterised protein family (UPF0180)
DUF965               PF06135.7     79 sp|O34783|YKUS_BACSU -             81      0.11   12.5   0.0   1   1   2.3e-05      0.17   11.9   0.0    16    36     6    26     1    28 0.84 Bacterial protein of unknown function (DUF965)
MS_channel           PF00924.13   206 sp|O34897|YKUT_BACSU -            267   1.3e-51  174.8   1.4   2   2   4.5e-55   1.3e-51  174.8   1.4     2   201    68   260    67   262 0.97 Mechanosensitive ion channel
Neisseria_PilC       PF05567.6    335 sp|O34897|YKUT_BACSU -            267     0.024   13.6   0.0   1   1   1.2e-05     0.035   13.1   0.0    10    54   127   170   120   192 0.81 Neisseria PilC beta-propeller domain
DUF1279              PF06916.8     91 sp|O34897|YKUT_BACSU -            267     0.029   14.6   0.6   1   2   6.3e-05      0.19   12.0   0.3     6    73     3    74     2    84 0.71 Protein of unknown function (DUF1279)
TRP                  PF06011.7    438 sp|O34897|YKUT_BACSU -            267     0.078   11.5   4.0   1   1   3.7e-05      0.11   11.0   4.0   156   228     9    87     6   127 0.81 Transient receptor potential (TRP) ion channel
DUF2975              PF11188.3    136 sp|O34897|YKUT_BACSU -            267      0.62    9.7   5.6   1   1   0.00032      0.94    9.1   5.6    21   106    19   106     6   124 0.76 Protein of unknown function (DUF2975)
AhpC-TSA             PF00578.16   124 sp|O34564|YKUU_BACSU -            180   5.9e-40  135.8   0.0   1   1   1.4e-43   7.1e-40  135.5   0.0     1   123     6   141     6   142 0.97 AhpC/TSA family
Redoxin              PF08534.5    146 sp|O34564|YKUU_BACSU -            180   9.1e-16   57.7   0.0   1   1   2.1e-19   1.1e-15   57.5   0.0     2   143     6   157     5   160 0.88 Redoxin
1-cysPrx_C           PF10417.4     40 sp|O34564|YKUU_BACSU -            180   2.2e-05   23.9   0.1   1   1   1.2e-08   5.9e-05   22.6   0.1     7    23   164   180   162   180 0.91 C-terminal domain of 1-Cys peroxiredoxin
adh_short            PF00106.20   167 sp|O31680|YKVO_BACSU -            248   2.6e-35  121.7   0.0   1   1   2.7e-38     5e-35  120.8   0.0     1   161     7   164     7   169 0.95 short chain dehydrogenase
adh_short_C2         PF13561.1    241 sp|O31680|YKVO_BACSU -            248   5.9e-32  111.3   0.0   1   1   3.7e-35   6.9e-32  111.1   0.0     6   240    16   245    13   246 0.93 Enoyl-(Acyl carrier protein) reductase
KR                   PF08659.5    181 sp|O31680|YKVO_BACSU -            248   2.6e-16   59.7   0.0   1   1   2.2e-19   4.1e-16   59.1   0.0     3   162     9   164     8   175 0.91 KR domain
NAD_binding_10       PF13460.1    183 sp|O31680|YKVO_BACSU -            248   1.8e-06   28.0   0.1   1   1   6.6e-09   1.2e-05   25.3   0.1     2   150    10   188     9   229 0.58 NADH(P)-binding
Epimerase            PF01370.16   236 sp|O31680|YKVO_BACSU -            248   0.00013   21.4   0.1   1   1   1.1e-06     0.002   17.6   0.1     1    96     9   115     9   216 0.69 NAD dependent epimerase/dehydratase family
Eno-Rase_NADH_b      PF12242.3     78 sp|O31680|YKVO_BACSU -            248     0.061   13.1   0.2   1   1   8.2e-05      0.15   11.8   0.2    35    56     3    23     1    35 0.84 NAD(P)H binding domain of trans-2-enoyl-CoA reductase
3HCDH_N              PF02737.13   180 sp|O31680|YKVO_BACSU -            248      0.07   12.7   0.1   1   1   5.9e-05      0.11   12.1   0.1     2    50     8    58     7    83 0.75 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain
3Beta_HSD            PF01073.14   280 sp|O31680|YKVO_BACSU -            248     0.079   11.6   0.2   1   1   6.2e-05      0.11   11.1   0.2     1   104    10   123    10   152 0.70 3-beta hydroxysteroid dehydrogenase/isomerase family
Glyco_hydro_18       PF00704.23   343 sp|O31682|YKVQ_BACSU -            232   2.6e-21   76.4   0.1   1   1   5.7e-25   4.3e-21   75.7   0.0    88   254    75   218    46   224 0.82 Glycosyl hydrolases family 18
Peptidase_M24        PF00557.19   207 sp|O31689|YKVY_BACSU -            363   2.3e-60  203.7   0.1   1   1     4e-64     3e-60  203.3   0.1     2   207   145   347   144   347 0.96 Metallopeptidase family M24
Creatinase_N         PF01321.13   132 sp|O31689|YKVY_BACSU -            363   3.9e-25   88.8   0.0   1   1   8.9e-29   6.6e-25   88.1   0.0     1   132     3   137     3   137 0.97 Creatinase/Prolidase N-terminal domain
Acetyltransf_9       PF13527.1    127 sp|Q796K9|YKWB_BACSU -            226     2e-09   37.3   0.0   1   2   1.2e-07   0.00045   20.0   0.0     1    64    19    86    19   111 0.77 Acetyltransferase (GNAT) domain
Acetyltransf_9       PF13527.1    127 sp|Q796K9|YKWB_BACSU -            226     2e-09   37.3   0.0   2   2   2.8e-06      0.01   15.6   0.0    72   101   112   141   102   165 0.82 Acetyltransferase (GNAT) domain
Acetyltransf_1       PF00583.19    83 sp|Q796K9|YKWB_BACSU -            226   3.2e-09   36.6   0.0   1   1   1.5e-12   5.5e-09   35.9   0.0     3    60    70   147    68   161 0.83 Acetyltransferase (GNAT) family
Acetyltransf_7       PF13508.1     79 sp|Q796K9|YKWB_BACSU -            226   5.6e-05   23.2   0.0   1   1   2.4e-08   8.8e-05   22.5   0.0     9    53    69   139    53   191 0.85 Acetyltransferase (GNAT) domain
Acetyltransf_10      PF13673.1    117 sp|Q796K9|YKWB_BACSU -            226      0.16   12.1   0.0   1   1   0.00011      0.41   10.7   0.0    29    91    48   139    27   149 0.67 Acetyltransferase (GNAT) domain
NAD_binding_2        PF03446.10   163 sp|O34948|YKWC_BACSU -            288   7.4e-56  188.4   0.6   1   1   1.2e-58   1.1e-55  187.8   0.6     2   163     3   164     2   164 0.98 NAD binding domain of 6-phosphogluconate dehydrogenase
NAD_binding_11       PF14833.1    122 sp|O34948|YKWC_BACSU -            288   1.7e-34  118.5   0.1   1   1   2.8e-37   2.6e-34  117.9   0.1     1   122   166   286   166   286 0.98 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase
F420_oxidored        PF03807.12    96 sp|O34948|YKWC_BACSU -            288     3e-11   43.5   1.0   1   1   8.2e-14   7.6e-11   42.2   0.0     1    94     4    96     4    98 0.87 NADP oxidoreductase coenzyme F420-dependent
3HCDH_N              PF02737.13   180 sp|O34948|YKWC_BACSU -            288     3e-08   33.5   0.1   1   1   3.2e-11     3e-08   33.5   0.1     1   111     4   117     4   121 0.85 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain
2-Hacid_dh_C         PF02826.14   178 sp|O34948|YKWC_BACSU -            288   8.6e-08   31.5   0.1   1   1   1.3e-10   1.2e-07   31.0   0.1    36   147     2   116     1   122 0.83 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain
Shikimate_DH         PF01488.15   135 sp|O34948|YKWC_BACSU -            288   3.3e-07   30.4   0.0   1   1     6e-10   5.6e-07   29.7   0.0    13   108     3    95     1   121 0.82 Shikimate / quinate 5-dehydrogenase
IlvN                 PF07991.7    165 sp|O34948|YKWC_BACSU -            288   0.00018   20.9   0.3   1   1   3.6e-07   0.00034   20.0   0.1     4    90     2    91     1    96 0.82 Acetohydroxy acid isomeroreductase, catalytic domain
NAD_binding_7        PF13241.1    103 sp|O34948|YKWC_BACSU -            288    0.0017   18.5   0.0   1   1   4.3e-06     0.004   17.3   0.0     8    86     3   115     1   123 0.69 Putative NAD(P)-binding
NAD_binding_10       PF13460.1    183 sp|O34948|YKWC_BACSU -            288    0.0019   18.2   0.0   1   1   3.4e-06    0.0031   17.5   0.0     5    74     9    74     5   115 0.75 NADH(P)-binding
ApbA                 PF02558.11   151 sp|O34948|YKWC_BACSU -            288    0.0027   17.1   0.0   1   1   5.4e-06     0.005   16.2   0.0     1    47     5    52     5    74 0.86 Ketopantoate reductase PanE/ApbA
NAD_Gly3P_dh_N       PF01210.18   157 sp|O34948|YKWC_BACSU -            288    0.0039   16.9   0.0   1   1   1.3e-05     0.012   15.2   0.0     2    43     5    46     4    83 0.88 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus
TrkA_N               PF02254.13   116 sp|O34948|YKWC_BACSU -            288     0.025   14.5   0.0   1   1   5.1e-05     0.047   13.6   0.0     4    42     8    46     5    70 0.87 TrkA-N domain
CbiK                 PF06180.6    262 sp|O34948|YKWC_BACSU -            288     0.027   13.5   0.0   1   1   4.2e-05     0.039   13.0   0.0   108   196    25   113    15   121 0.93 Cobalt chelatase (CbiK)
PDH                  PF02153.12   258 sp|O34948|YKWC_BACSU -            288     0.032   13.1   0.1   1   1   4.7e-05     0.043   12.6   0.1     7   112    23   128    17   139 0.70 Prephenate dehydrogenase
NmrA                 PF05368.8    233 sp|O34948|YKWC_BACSU -            288     0.033   13.4   0.1   1   1   7.3e-05     0.068   12.4   0.1     8    91    11   111     7   115 0.55 NmrA-like family
TraX                 PF05857.6    219 sp|O34948|YKWC_BACSU -            288     0.098   12.2   0.0   1   1   0.00015      0.14   11.7   0.0    37   106   148   221   146   235 0.91 TraX protein
DUF1447              PF07288.6     69 sp|O31718|YKZG_BACSU -             69     7e-31  105.8   3.3   1   1   5.1e-35   7.6e-31  105.7   3.3     1    68     2    68     2    69 0.98 Protein of unknown function (DUF1447)
Glyco_hydro_18       PF00704.23   343 sp|C0H404|YKZR_BACSU -             83   2.1e-05   24.1   0.0   1   1   1.4e-09   2.1e-05   24.1   0.0   305   342    35    70     8    71 0.81 Glycosyl hydrolases family 18
Tiny_TM_bacill       PF09680.5     24 sp|C0H409|YKZV_BACSU -             52   4.2e-14   51.6   6.4   3   3   2.9e-18   4.2e-14   51.6   6.4     1    23    24    46    24    47 0.96 Protein of unknown function (Tiny_TM_bacill)
Sigma70_r2           PF04542.9     71 sp|O07627|YLAC_BACSU -            173   1.1e-15   56.9   1.2   1   1   1.7e-18   3.1e-15   55.5   1.5     1    68    10    75    10    78 0.97 Sigma-70 region 2
Sigma70_r4_2         PF08281.7     54 sp|O07627|YLAC_BACSU -            173     3e-14   52.2   0.6   1   1   3.9e-17   7.2e-14   50.9   0.6     3    54   109   160   107   160 0.95 Sigma-70, region 4
Sigma70_r4           PF04545.11    50 sp|O07627|YLAC_BACSU -            173   9.5e-10   37.6   0.6   1   1   1.1e-12   2.1e-09   36.5   0.6     3    50   115   162   114   162 0.96 Sigma-70, region 4
HTH_24               PF13412.1     48 sp|O07627|YLAC_BACSU -            173   0.00012   21.4   0.7   2   2   5.4e-07     0.001   18.4   0.0    11    40   126   155   124   157 0.86 Winged helix-turn-helix DNA-binding
Sigma70_ECF          PF07638.6    185 sp|O07627|YLAC_BACSU -            173   0.00012   21.8   3.5   1   1   2.3e-07   0.00042   20.0   3.5    20   183     8   164     3   166 0.65 ECF sigma factor
HTH_23               PF13384.1     50 sp|O07627|YLAC_BACSU -            173    0.0014   18.2   2.2   1   1   3.4e-06    0.0063   16.1   0.3     5    41   109   156   106   161 0.72 Homeodomain-like domain
AAA_assoc            PF14363.1     98 sp|O07627|YLAC_BACSU -            173    0.0077   16.2   1.3   2   2   8.7e-06     0.016   15.2   0.2     6    80    56   132    51   163 0.81 Domain associated at C-terminal with AAA
HTH_AsnC-type        PF13404.1     42 sp|O07627|YLAC_BACSU -            173     0.043   13.3   0.0   2   2   0.00036      0.67    9.5   0.0    17    40   132   155   125   157 0.81 AsnC-type helix-turn-helix domain
zf-HC2               PF13490.1     36 sp|O07628|YLAD_BACSU -             97   6.3e-10   38.8   3.6   1   1   8.6e-14   1.3e-09   37.8   3.6     1    35     3    37     3    38 0.95 Putative zinc-finger
PhoH                 PF02562.11   205 sp|O07635|YLAK_BACSU -            442   5.6e-53  179.2   0.0   1   1   8.1e-56   8.6e-53  178.6   0.0     2   186   233   426   232   441 0.89 PhoH-like protein
PIN_4                PF13638.1    133 sp|O07635|YLAK_BACSU -            442   4.7e-34  117.3   0.7   1   1     7e-37   7.4e-34  116.7   0.7     1   132     5   147     5   148 0.83 PIN domain
AAA_30               PF13604.1    196 sp|O07635|YLAK_BACSU -            442   3.5e-09   36.5   0.9   1   2   5.6e-05     0.059   12.9   0.0     4    37   238   271   236   290 0.84 AAA domain
AAA_30               PF13604.1    196 sp|O07635|YLAK_BACSU -            442   3.5e-09   36.5   0.9   2   2   1.5e-07   0.00016   21.3   0.0    93   133   357   396   333   398 0.89 AAA domain
AAA_22               PF13401.1    131 sp|O07635|YLAK_BACSU -            442     5e-06   26.6   0.9   1   1   6.2e-08   6.6e-05   23.0   0.9     6   127   254   396   249   399 0.73 AAA domain
Viral_helicase1      PF01443.13   234 sp|O07635|YLAK_BACSU -            442    0.0011   18.5   0.0   1   1   2.1e-06    0.0022   17.5   0.0    60   103   357   399   343   419 0.81 Viral (Superfamily 1) RNA helicase
AAA_25               PF13481.1    194 sp|O07635|YLAK_BACSU -            442    0.0084   15.5   0.0   1   1   1.6e-05     0.017   14.5   0.0    24   158   246   373   236   376 0.68 AAA domain
AAA_11               PF13086.1    236 sp|O07635|YLAK_BACSU -            442     0.013   15.1   0.2   2   2   9.8e-05       0.1   12.1   0.0   195   229   360   396   337   400 0.81 AAA domain
AAA_19               PF13245.1     76 sp|O07635|YLAK_BACSU -            442     0.016   14.9   0.2   1   1   5.5e-05     0.058   13.1   0.2    11    47   253   288   243   292 0.74 Part of AAA domain
PIN                  PF01850.16   121 sp|O07635|YLAK_BACSU -            442     0.024   14.9   0.1   1   1   5.1e-05     0.054   13.8   0.1     1   104     5   112     5   130 0.70 PIN domain
DUF4350              PF14258.1     70 sp|O07635|YLAK_BACSU -            442     0.068   13.3   0.0   1   1   0.00064      0.68   10.1   0.0    35    69   357   390   334   391 0.87 Domain of unknown function (DUF4350)
ABC_tran             PF00005.22   137 sp|O07635|YLAK_BACSU -            442     0.069   13.4   0.0   1   1   0.00033      0.35   11.1   0.0    13    96   254   344   250   391 0.78 ABC transporter
IstB_IS21            PF01695.12   178 sp|O07635|YLAK_BACSU -            442      0.13   11.6   0.0   1   1   0.00026      0.27   10.6   0.0    31    69   234   274   218   280 0.73 IstB-like ATP binding protein
DUF1507              PF07408.6     91 sp|O07638|YLAN_BACSU -             93     3e-44  148.6   0.4   1   1   2.3e-48   3.4e-44  148.5   0.4     2    90     4    92     3    93 0.97 Protein of unknown function (DUF1507)
DUF2129              PF09902.4     71 sp|O34658|YLBG_BACSU -             90   2.4e-32  110.5   2.9   1   1   1.9e-36   2.9e-32  110.2   2.9     1    71     5    75     5    75 0.99 Uncharacterized protein conserved in bacteria (DUF2129)
Cons_hypoth95        PF03602.10   183 sp|O34331|YLBH_BACSU -            184   1.7e-58  197.0   0.0   1   1   1.5e-61   1.8e-58  196.9   0.0     1   183     1   181     1   181 0.98 Conserved hypothetical protein 95
MTS                  PF05175.9    170 sp|O34331|YLBH_BACSU -            184     1e-07   31.4   0.0   1   1     1e-10   1.3e-07   31.1   0.0    31   140    41   149    24   174 0.79 Methyltransferase small domain
Methyltransf_26      PF13659.1    117 sp|O34331|YLBH_BACSU -            184   5.1e-07   29.7   0.0   1   1   5.2e-10   6.4e-07   29.4   0.0     2    83    43   126    42   158 0.84 Methyltransferase domain
Methyltransf_15      PF09445.5    164 sp|O34331|YLBH_BACSU -            184   5.1e-05   22.8   0.0   1   1   5.7e-08     7e-05   22.4   0.0     5    80    46   123    43   140 0.92 RNA cap guanine-N2 methyltransferase
UPF0020              PF01170.13   180 sp|O34331|YLBH_BACSU -            184   0.00039   20.0   0.0   1   1   4.5e-07   0.00056   19.5   0.0    33   118    46   125    33   140 0.85 Putative RNA methylase family UPF0020
MethyltransfD12      PF02086.10   260 sp|O34331|YLBH_BACSU -            184   0.00047   19.6   0.0   1   2   4.6e-05     0.057   12.8   0.0     5    79    29   106    28   115 0.81 D12 class N6 adenine-specific DNA methyltransferase
Methyltransf_31      PF13847.1    152 sp|O34331|YLBH_BACSU -            184    0.0021   17.6   0.0   1   1   2.2e-06    0.0027   17.3   0.0     7   110    45   151    41   175 0.74 Methyltransferase domain
DNA_methylase        PF00145.12   335 sp|O34331|YLBH_BACSU -            184    0.0027   16.8   0.0   1   1   2.9e-06    0.0036   16.4   0.0     3    55    45    97    43   106 0.89 C-5 cytosine-specific DNA methylase
Methyltransf_18      PF12847.2    112 sp|O34331|YLBH_BACSU -            184    0.0042   17.6   0.0   1   1   4.4e-06    0.0054   17.3   0.0     2   110    42   150    41   152 0.77 Methyltransferase domain
PrmA                 PF06325.8    295 sp|O34331|YLBH_BACSU -            184    0.0046   16.1   0.0   1   1   5.2e-06    0.0064   15.6   0.0   141   218    18    98    16   111 0.78 Ribosomal protein L11 methyltransferase (PrmA)
RsmJ                 PF04378.8    245 sp|O34331|YLBH_BACSU -            184     0.049   12.6   0.0   1   1   4.5e-05     0.055   12.4   0.0    58   143    42   130     6   148 0.74 Ribosomal RNA small subunit methyltransferase D, RsmJ
Methyltransf_24      PF13578.1    106 sp|O34331|YLBH_BACSU -            184     0.065   14.0   0.0   1   1   7.9e-05     0.098   13.4   0.0    17   102    59   148    49   152 0.76 Methyltransferase domain
Patatin              PF01734.17   204 sp|O34731|YLBK_BACSU -            260   4.8e-24   85.4   2.8   1   1   3.8e-26   5.6e-22   78.6   2.8     1   202     8   164     8   166 0.96 Patatin-like phospholipase
HIGH_NTase1          PF05636.6    388 sp|O34513|YLBM_BACSU -            415  2.2e-160  533.9   0.1   1   1  6.7e-164  2.5e-160  533.7   0.1     1   388     1   403     1   403 0.99 HIGH Nucleotidyl Transferase
HHH_3                PF12836.2     65 sp|O34513|YLBM_BACSU -            415   0.00051   19.9   0.0   2   2   7.7e-06     0.029   14.3   0.0     8    64   258   314   253   315 0.93 Helix-hairpin-helix motif
CTP_transf_2         PF01467.21   157 sp|O34513|YLBM_BACSU -            415     0.015   15.3   0.0   1   1   1.1e-05     0.039   14.0   0.0     6    55    10    59     9    62 0.93 Cytidylyltransferase
DUF2317              PF10079.4    542 sp|P55342|YLLA_BACSU -            539  1.2e-188  628.1   9.1   1   1  1.9e-192  1.4e-188  627.9   9.1     1   542     1   539     1   539 0.99 Uncharacterized protein conserved in bacteria (DUF2317)
Vip3A_N              PF12495.3    177 sp|P55342|YLLA_BACSU -            539     0.083   12.5   0.2   1   1   2.1e-05      0.15   11.7   0.2    48   135   385   473   378   499 0.86 Vegetative insecticide protein 3A N terminal
ABC_tran             PF00005.22   137 sp|O31723|YLMA_BACSU -            264   2.6e-26   92.5   0.0   1   1   3.3e-29   3.5e-26   92.1   0.0     1   136    18   169    18   170 0.93 ABC transporter
AAA_21               PF13304.1    303 sp|O31723|YLMA_BACSU -            264   2.5e-09   37.5   0.3   1   2   2.8e-05      0.03   14.2   0.1     3    24    32    53    32    83 0.80 AAA domain
AAA_21               PF13304.1    303 sp|O31723|YLMA_BACSU -            264   2.5e-09   37.5   0.3   2   2   1.7e-07   0.00018   21.5   0.0   168   298   110   202    83   208 0.68 AAA domain
AAA_22               PF13401.1    131 sp|O31723|YLMA_BACSU -            264   1.3e-05   25.3   0.5   1   1   2.3e-07   0.00025   21.2   0.5     6   131    30   207    25   207 0.63 AAA domain
Thymidylate_kin      PF02223.12   186 sp|O31723|YLMA_BACSU -            264   0.00019   20.8   0.0   1   1   3.3e-07   0.00035   19.9   0.0     3    46    35    79    33    98 0.87 Thymidylate kinase
AAA_15               PF13175.1    415 sp|O31723|YLMA_BACSU -            264   0.00056   19.0   0.0   2   2   0.00021      0.22   10.5   0.0   372   411   162   202   138   204 0.86 AAA ATPase domain
AAA_23               PF13476.1    202 sp|O31723|YLMA_BACSU -            264     0.011   16.0   0.2   1   1   2.9e-05      0.03   14.6   0.1    23    44    32    53    19    89 0.84 AAA domain
cobW                 PF02492.14   178 sp|O31723|YLMA_BACSU -            264     0.031   13.7   0.0   1   1   4.5e-05     0.048   13.1   0.0     4    45    32    74    30    88 0.81 CobW/HypB/UreG, nucleotide-binding domain
DUF258               PF03193.11   161 sp|O31723|YLMA_BACSU -            264      0.05   12.8   0.0   1   1   6.7e-05     0.071   12.2   0.0    25    59    17    52     3    89 0.76 Protein of unknown function, DUF258
Arch_ATPase          PF01637.13   234 sp|O31723|YLMA_BACSU -            264     0.099   12.3   0.1   1   1   0.00018      0.19   11.3   0.0    19    41    27    49    17   138 0.81 Archaeal ATPase
AAA_10               PF12846.2    304 sp|O31723|YLMA_BACSU -            264       0.1   12.0   0.3   1   1   0.00029       0.3   10.4   0.3     3    26    30    53    28   157 0.93 AAA-like domain
AAA_29               PF13555.1     62 sp|O31723|YLMA_BACSU -            264      0.11   12.1   0.0   1   1   0.00022      0.23   10.9   0.0    16    41    22    46    15    58 0.83 P-loop containing region of AAA domain
AAA_13               PF13166.1    712 sp|O31723|YLMA_BACSU -            264      0.15   10.5   0.0   1   2   0.00092      0.98    7.7   0.0    20    36    32    48    22    61 0.85 AAA domain
PRC                  PF05239.11    79 sp|O31725|YLMC_BACSU -             81   4.7e-15   55.2   3.4   1   1   3.6e-19   5.4e-15   55.0   3.4     4    74     2    76     1    80 0.93 PRC-barrel domain
Cu-oxidase_4         PF02578.10   234 sp|O31726|YLMD_BACSU -            278   4.1e-75  251.8   0.0   1   1   6.3e-79   4.7e-75  251.6   0.0     1   234    34   275    34   275 0.99 Multi-copper polyphenol oxidoreductase laccase
EnY2                 PF10163.4     86 sp|O31726|YLMD_BACSU -            278     0.035   14.0   0.0   1   1     1e-05     0.075   12.9   0.0    30    64   150   185   146   203 0.88 Transcription factor e(y)2
Ala_racemase_N       PF01168.15   218 sp|O31727|YLME_BACSU -            230     1e-37  129.8   0.0   1   1   2.3e-41   1.1e-37  129.6   0.0     2   216     6   223     5   225 0.87 Alanine racemase, N-terminal domain
FlgN                 PF05130.7    143 sp|O31727|YLME_BACSU -            230      0.09   13.0   0.1   2   2   7.8e-05      0.39   10.9   0.0    71   120   153   202   102   210 0.86 FlgN protein
Bac_luciferase       PF00296.15   307 sp|O31727|YLME_BACSU -            230      0.15   11.1   0.0   1   1   3.7e-05      0.18   10.8   0.0   197   246     4    53     1   115 0.74 Luciferase-like monooxygenase
YGGT                 PF02325.12    75 sp|O31729|YLMG_BACSU -             90     3e-25   87.9   5.6   1   1   2.5e-29   3.7e-25   87.6   5.6     1    74    10    83    10    84 0.95 YGGT family
FbpA                 PF05833.6    455 sp|O34693|YLOA_BACSU -            572  9.1e-166  551.8  10.2   1   1  2.2e-169  1.1e-165  551.6  10.2     1   454     6   446     6   447 0.98 Fibronectin-binding protein A N-terminus (FbpA)
DUF814               PF05670.8     90 sp|O34693|YLOA_BACSU -            572   4.3e-30  103.4   0.3   1   1   2.5e-33   1.2e-29  101.9   0.1     4    90   457   540   454   540 0.95 Domain of unknown function (DUF814)
YicC_N               PF03755.8    159 sp|O34441|YLOC_BACSU -            291   2.5e-41  141.2   0.6   1   1   1.9e-44   4.6e-41  140.3   0.1     1   158     2   157     2   158 0.94 YicC-like family, N-terminal region
DUF1732              PF08340.6     87 sp|O34441|YLOC_BACSU -            291   5.1e-38  128.7   4.0   3   3   3.2e-41   7.8e-38  128.2   1.1     2    87   207   291   206   291 0.97 Domain of unknown function (DUF1732)
Syntaxin             PF00804.20   103 sp|O34441|YLOC_BACSU -            291      0.48   10.5   7.1   2   2   0.00035      0.86    9.8   3.5    20    69   247   291   210   291 0.89 Syntaxin
Asp23                PF03780.8    108 sp|O34318|YLOU_BACSU -            120   4.3e-36  123.4   7.7   1   1   3.2e-40   4.8e-36  123.3   7.7     2   108     9   116     8   116 0.97 Asp23 family
KH_4                 PF13083.1     73 sp|O31738|YLQC_BACSU -             81   2.6e-19   68.6   0.2   1   1   5.8e-23   2.9e-19   68.4   0.2     1    73     7    79     7    79 0.97 KH domain
KH_2                 PF07650.12    78 sp|O31738|YLQC_BACSU -             81   0.00015   21.2   0.1   1   1   3.4e-08   0.00017   21.0   0.1    19    54    25    64    11    81 0.77 KH domain
KH_1                 PF00013.24    60 sp|O31738|YLQC_BACSU -             81   0.00032   20.2   0.5   2   2   1.5e-07   0.00076   19.0   0.1     3    26    38    61    36    67 0.93 KH domain
FlgD                 PF03963.9     82 sp|P23455|YLXG_BACSU -            140   1.6e-24   85.7  10.2   1   2     3e-28   2.2e-24   85.3   8.1    21    82    13    74     1    74 0.88 Flagellar hook capping protein - N-terminal region
VPS9                 PF02204.13   104 sp|P23455|YLXG_BACSU -            140     0.029   14.3   0.2   1   1   5.1e-06     0.038   14.0   0.2    34    80    16    60    10   119 0.86 Vacuolar sorting protein 9 (VPS9) domain
CbiA                 PF01656.18   195 sp|P40742|YLXH_BACSU -            298   3.1e-21   75.6   0.2   1   1   3.7e-24   4.3e-21   75.2   0.2     1   166    34   211    34   243 0.70 CobQ/CobB/MinD/ParA nucleotide binding domain
AAA_31               PF13614.1    157 sp|P40742|YLXH_BACSU -            298     8e-18   64.8   0.0   1   1   1.2e-20   1.3e-17   64.1   0.0     1   154    32   177    32   180 0.91 AAA domain
Fer4_NifH            PF00142.13   273 sp|P40742|YLXH_BACSU -            298     2e-10   40.3   1.8   1   1   4.1e-12   4.6e-09   35.8   1.8     4   251    36   277    33   296 0.73 4Fe-4S iron sulfur cluster binding proteins, NifH/frxC family
ArsA_ATPase          PF02374.10   305 sp|P40742|YLXH_BACSU -            298   4.4e-06   25.9   0.5   1   1   8.8e-09     1e-05   24.7   0.5     5    38    36    69    32    75 0.94 Anion-transporting ATPase
YhjQ                 PF06564.7    244 sp|P40742|YLXH_BACSU -            298   5.2e-06   26.0   0.4   1   2   2.1e-06    0.0024   17.2   0.2     5    38    35    68    31    75 0.89 YhjQ protein
MipZ                 PF09140.6    261 sp|P40742|YLXH_BACSU -            298   2.9e-05   23.2   0.2   1   1   6.2e-08   7.1e-05   22.0   0.1     7    49    38    80    32   103 0.85 ATPase MipZ
AAA_25               PF13481.1    194 sp|P40742|YLXH_BACSU -            298   0.00021   20.7   0.0   1   1   3.7e-07   0.00043   19.7   0.0    15    78    12    67     3    75 0.74 AAA domain
VirC1                PF07015.6    231 sp|P40742|YLXH_BACSU -            298    0.0022   17.0   0.6   2   2   0.00043      0.49    9.4   0.0    80   150   138   206   130   228 0.80 VirC1 protein
ParA                 PF10609.4     81 sp|P40742|YLXH_BACSU -            298    0.0032   17.3   3.0   2   3   3.9e-05     0.044   13.6   0.2     2    47   143   186   142   200 0.87 ParA/MinD ATPase like
FtsK_SpoIIIE         PF01580.13   205 sp|P40742|YLXH_BACSU -            298    0.0055   16.2   0.5   1   2   1.4e-05     0.016   14.6   0.1    16    85    10    77     2    93 0.80 FtsK/SpoIIIE family
ArgK                 PF03308.11   267 sp|P40742|YLXH_BACSU -            298     0.029   13.1   0.1   1   1   5.6e-05     0.064   12.0   0.1    14    66    18    69     8    74 0.81 ArgK protein
MobB                 PF03205.9    140 sp|P40742|YLXH_BACSU -            298      0.03   14.0   0.1   1   1   7.2e-05     0.082   12.6   0.1     4    46    36    77    33    96 0.92 Molybdopterin guanine dinucleotide synthesis protein B
AAA_10               PF12846.2    304 sp|P40742|YLXH_BACSU -            298      0.07   12.5   0.1   1   1   0.00011      0.12   11.7   0.1     4    37    35    68    32   142 0.86 AAA-like domain
UPF0122              PF04297.9    101 sp|P37104|YLXM_BACSU -            110   1.4e-42  143.8  10.5   1   1   1.2e-45   1.6e-42  143.6  10.5     1   100     3   102     3   103 0.97 Putative helix-turn-helix protein, YlxM / p13 like
Sigma70_r4           PF04545.11    50 sp|P37104|YLXM_BACSU -            110   3.2e-05   23.1   0.0   1   1   5.2e-08     7e-05   22.0   0.0     5    37    20    52    18    59 0.94 Sigma-70, region 4
HTH_11               PF08279.7     55 sp|P37104|YLXM_BACSU -            110   7.5e-05   22.3   0.0   1   1   1.1e-07   0.00015   21.3   0.0    15    43    35    63    23    74 0.88 HTH domain
Sigma70_r4_2         PF08281.7     54 sp|P37104|YLXM_BACSU -            110   0.00014   21.2   2.4   1   2   1.6e-07   0.00022   20.6   0.1    11    50    20    59    18    63 0.91 Sigma-70, region 4
HTH_28               PF13518.1     52 sp|P37104|YLXM_BACSU -            110    0.0012   18.7   0.0   1   1   1.7e-06    0.0024   17.8   0.0     7    35    30    58    28    61 0.92 Helix-turn-helix domain
HTH_23               PF13384.1     50 sp|P37104|YLXM_BACSU -            110    0.0025   17.4   0.0   1   1   3.8e-06    0.0051   16.4   0.0    14    40    32    58    22    70 0.85 Homeodomain-like domain
Mga                  PF05043.8     87 sp|P37104|YLXM_BACSU -            110    0.0025   18.0   2.2   1   1   2.4e-06    0.0032   17.7   1.6     8    69    15    75     5    81 0.79 Mga helix-turn-helix domain
IIGP                 PF05049.8    376 sp|P37104|YLXM_BACSU -            110    0.0028   16.5   0.5   1   1   2.2e-06     0.003   16.4   0.5   270   339    15    85     3   102 0.74 Interferon-inducible GTPase (IIGP)
Sigma70_ECF          PF07638.6    185 sp|P37104|YLXM_BACSU -            110     0.017   14.7   0.6   1   2   6.2e-05     0.084   12.5   0.0   136   179    20    63     3    69 0.81 ECF sigma factor
MarR_2               PF12802.2     62 sp|P37104|YLXM_BACSU -            110      0.13   11.9   0.0   1   1   0.00017      0.23   11.1   0.0    14    46    30    60    22    62 0.84 MarR family
Ribosomal_L7Ae       PF01248.21    95 sp|P32729|YLXQ_BACSU -            100   5.1e-20   70.7   0.2   1   1   3.7e-24   5.5e-20   70.6   0.2     5    94     8    95     4    96 0.95 Ribosomal protein L7Ae/L30e/S12e/Gadd45 family
DUF881               PF05949.7    149 sp|C0SPA3|YLXW_BACSU -            231   1.6e-42  144.4   0.1   1   1   1.3e-45   2.4e-42  143.9   0.1     2   137    90   226    89   231 0.97 Bacterial protein of unknown function (DUF881)
ABC2_membrane_3      PF12698.2    344 sp|C0SPA3|YLXW_BACSU -            231   0.00099   18.2   0.1   1   1   6.1e-07    0.0011   18.0   0.1     9   122     9   141     5   203 0.70 ABC-2 family transporter protein
IncA                 PF04156.9    191 sp|C0SPA3|YLXW_BACSU -            231    0.0054   16.3   1.4   1   1   4.5e-06    0.0084   15.7   1.4    39   128     7    95     5   102 0.76 IncA protein
Peptidase_S49_N      PF08496.5    155 sp|C0SPA3|YLXW_BACSU -            231     0.011   15.5   4.8   1   1   9.9e-06     0.018   14.8   4.8    19   102    10    99     4   106 0.74 Peptidase family S49 N-terminal
TRAP-gamma           PF07074.7    170 sp|C0SPA3|YLXW_BACSU -            231     0.085   12.3   3.6   1   1   7.5e-05      0.14   11.6   3.6    46   126     4    89     2    97 0.85 Translocon-associated protein, gamma subunit (TRAP-gamma)
DUF106               PF01956.11   168 sp|C0SPA3|YLXW_BACSU -            231       0.3   10.5   3.0   1   1   0.00026      0.49    9.9   3.0    16    88    10    81     4   102 0.82 Integral membrane protein DUF106
DUF881               PF05949.7    149 sp|Q45544|YLXX_BACSU -            235   6.3e-31  106.8   0.0   1   1   1.2e-34     9e-31  106.3   0.0     2   147    84   231    83   233 0.96 Bacterial protein of unknown function (DUF881)
DivIC                PF04977.10    80 sp|Q45544|YLXX_BACSU -            235     0.039   13.4   3.5   1   2   1.8e-05      0.13   11.7   3.3    16    61    36    81    32    85 0.93 Septum formation initiator
Polysacc_deac_1      PF01522.16   124 sp|P50850|YLXY_BACSU -            319   6.9e-29  100.0   0.0   1   1   3.2e-32   1.6e-28   98.8   0.0     2   120   125   244   124   248 0.93 Polysaccharide deacetylase
Glyco_hydro_57       PF03065.10   360 sp|P50850|YLXY_BACSU -            319   5.9e-06   25.4   0.0   1   1   1.8e-09     9e-06   24.8   0.0   112   192   171   249   115   270 0.88 Glycosyl hydrolase family 57
PG_binding_4         PF12229.3    114 sp|P50850|YLXY_BACSU -            319     0.005   17.0   1.3   1   2   1.9e-06    0.0093   16.1   0.1    45   103    38    93    26    99 0.88 Putative peptidoglycan binding domain
PseudoU_synth_2      PF00849.17   164 sp|Q45480|YLYB_BACSU -            303   1.6e-37  128.8   0.2   1   1     9e-41   2.2e-37  128.4   0.2     1   163    88   241    88   242 0.90 RNA pseudouridylate synthase
S4                   PF01479.20    48 sp|Q45480|YLYB_BACSU -            303   2.7e-12   45.9   0.0   1   1   2.1e-15   5.2e-12   45.0   0.0     1    48    15    61    15    61 0.98 S4 domain
Poly_export          PF02563.11    83 sp|Q45480|YLYB_BACSU -            303    0.0078   15.9   0.1   1   1   9.8e-06     0.024   14.3   0.1     6    30    47    71    42   112 0.77 Polysaccharide biosynthesis/export protein
ThiS-like            PF14453.1     57 sp|Q45480|YLYB_BACSU -            303     0.025   14.4   0.2   1   2   4.7e-05      0.12   12.2   0.0    32    52    42    62    24    64 0.88 ThiS-like ubiquitin
Ub-Mut7C             PF14451.1     81 sp|Q45480|YLYB_BACSU -            303     0.051   13.1   0.1   1   1   5.6e-05      0.14   11.7   0.1    50    78    40    69    39    72 0.84 Mut7-C ubiquitin
S4_2                 PF13275.1     65 sp|Q45480|YLYB_BACSU -            303       0.1   12.1   0.4   1   1   0.00011      0.26   10.8   0.1    26    57    33    63    31    73 0.83 S4 domain
DUF370               PF04025.7     73 sp|Q7WY72|YLZA_BACSU -             89   1.6e-39  133.8   0.6   1   1   1.2e-43   1.8e-39  133.5   0.6     1    73     5    77     5    77 0.99 Domain of unknown function (DUF370)
DUF867               PF05908.6    194 sp|O31789|YMAC_BACSU -            235   2.2e-74  248.7   1.9   1   1   1.7e-78   2.5e-74  248.5   1.9     1   194    36   226    36   226 0.99 Protein of unknown function (DUF867)
OsmC                 PF02566.14   100 sp|O31790|YMAD_BACSU -            150   1.4e-16   60.5   0.1   1   1   1.2e-20   1.7e-16   60.1   0.1     1    99    39   141    39   142 0.90 OsmC-like protein
Peptidase_M16_C      PF05193.16   184 sp|O31764|YMFF_BACSU -            426   4.5e-25   88.4   0.7   2   2   3.9e-28   1.4e-24   86.7   0.6     1   182   184   357   184   359 0.94 Peptidase M16 inactive domain
Peptidase_M16        PF00675.15   149 sp|O31764|YMFF_BACSU -            426   1.2e-05   25.1   0.2   1   2   7.9e-07    0.0029   17.3   0.0    36   138    47   168    46   178 0.79 Insulinase (Peptidase family M16)
G-alpha              PF00503.15   389 sp|O31764|YMFF_BACSU -            426    0.0051   15.5   0.3   1   1   2.7e-06      0.01   14.5   0.3    72   121   333   382   329   416 0.82 G-protein alpha subunit
CDT1                 PF08839.6    163 sp|O31764|YMFF_BACSU -            426     0.073   13.0   1.0   2   2   0.00012      0.46   10.4   0.0     9    58   310   359   302   403 0.93 DNA replication factor CDT1 like
Peptidase_M16        PF00675.15   149 sp|O31766|YMFH_BACSU -            428   3.8e-17   62.4   0.3   1   2   1.7e-20   1.2e-16   60.7   0.0    32   148    65   176    61   177 0.93 Insulinase (Peptidase family M16)
Peptidase_M16_C      PF05193.16   184 sp|O31766|YMFH_BACSU -            428   1.2e-16   60.9   0.1   2   2   3.6e-20   2.6e-16   59.8   0.0     2   181   183   360   182   363 0.88 Peptidase M16 inactive domain
adh_short            PF00106.20   167 sp|O31767|YMFI_BACSU -            242   2.1e-26   92.8   1.3   1   1   1.6e-29   2.7e-26   92.4   1.3     1   166     3   168     3   169 0.95 short chain dehydrogenase
adh_short_C2         PF13561.1    241 sp|O31767|YMFI_BACSU -            242   6.3e-26   91.6   0.5   1   1   4.7e-29   7.7e-26   91.3   0.5     5   241    11   241     9   241 0.87 Enoyl-(Acyl carrier protein) reductase
KR                   PF08659.5    181 sp|O31767|YMFI_BACSU -            242   4.7e-15   55.7   1.0   1   1   3.9e-18   6.4e-15   55.2   1.0     2   169     4   170     4   186 0.85 KR domain
Epimerase            PF01370.16   236 sp|O31767|YMFI_BACSU -            242   1.7e-06   27.6   0.2   1   1   1.4e-09   2.4e-06   27.1   0.2     1    93     5   106     5   167 0.81 NAD dependent epimerase/dehydratase family
NAD_binding_10       PF13460.1    183 sp|O31767|YMFI_BACSU -            242    0.0004   20.4   0.1   1   1   5.7e-07   0.00094   19.2   0.1     2    98     6   137     6   183 0.74 NADH(P)-binding
DUF1776              PF08643.5    299 sp|O31767|YMFI_BACSU -            242    0.0013   17.9   0.0   1   1   9.4e-07    0.0016   17.6   0.0   101   210    86   191    15   204 0.88 Fungal family of unknown function (DUF1776)
Eno-Rase_NADH_b      PF12242.3     78 sp|O31767|YMFI_BACSU -            242     0.017   14.9   0.1   1   1   2.8e-05     0.046   13.5   0.1    40    75     3    36     2    39 0.84 NAD(P)H binding domain of trans-2-enoyl-CoA reductase
FR47                 PF08445.5     86 sp|O31767|YMFI_BACSU -            242     0.021   14.5   0.2   1   2   0.00014      0.23   11.2   0.0    42    75    14    47     6    51 0.91 FR47-like protein
NmrA                 PF05368.8    233 sp|O31767|YMFI_BACSU -            242     0.029   13.6   0.1   1   1   2.7e-05     0.044   13.0   0.1     2    53     6    63     5   111 0.71 NmrA-like family
Peptidase_M16        PF00675.15   149 sp|Q04805|YMXG_BACSU -            409   7.6e-51  171.7   0.0   1   1   5.9e-54   1.7e-50  170.6   0.0     1   148    12   159    12   160 0.99 Insulinase (Peptidase family M16)
Peptidase_M16_C      PF05193.16   184 sp|Q04805|YMXG_BACSU -            409   5.7e-38  130.4   0.1   2   2   5.4e-41   1.6e-37  128.9   0.1     2   184   166   338   165   338 0.95 Peptidase M16 inactive domain
Peptidase_M44        PF03410.8    590 sp|Q04805|YMXG_BACSU -            409    0.0071   14.6   0.1   1   1   4.5e-06     0.013   13.7   0.1     5    98     8   119     5   133 0.69 Protein G1
7TMR-HDED            PF07697.6    222 sp|Q04805|YMXG_BACSU -            409     0.037   13.7   0.1   1   1     2e-05     0.058   13.1   0.1    87   151   286   352   196   378 0.81 7TM-HD extracellular
MethyTransf_Reg      PF10119.4     86 sp|Q04805|YMXG_BACSU -            409     0.094   13.2   1.7   1   1   8.7e-05      0.26   11.8   1.0    12    72    78   140    76   147 0.82 Predicted methyltransferase regulatory domain
PRC                  PF05239.11    79 sp|Q04811|YMXH_BACSU -             85   6.7e-16   57.9   0.0   1   1   4.9e-20   7.2e-16   57.8   0.0     4    78     1    80     1    81 0.97 PRC-barrel domain
Acetyltransf_3       PF13302.1    142 sp|P94482|YNAD_BACSU -            170   3.1e-33  114.9   0.0   1   1   1.6e-36     4e-33  114.5   0.0     1   142     7   141     7   141 0.88 Acetyltransferase (GNAT) domain
Acetyltransf_4       PF13420.1    155 sp|P94482|YNAD_BACSU -            170   6.9e-18   65.0   1.0   1   1   3.3e-21     8e-18   64.8   1.0     1   153    10   159    10   161 0.88 Acetyltransferase (GNAT) domain
Acetyltransf_1       PF00583.19    83 sp|P94482|YNAD_BACSU -            170   2.8e-12   46.4   0.0   1   1   1.6e-15     4e-12   46.0   0.0     2    83    64   141    63   141 0.96 Acetyltransferase (GNAT) family
Acetyltransf_8       PF13523.1    152 sp|P94482|YNAD_BACSU -            170   1.4e-07   31.5   0.0   1   1   7.2e-11   1.8e-07   31.1   0.0     8   143    16   147    10   154 0.77 Acetyltransferase (GNAT) domain
Acetyltransf_7       PF13508.1     79 sp|P94482|YNAD_BACSU -            170   8.6e-05   22.6   0.2   1   1   5.3e-08   0.00013   22.0   0.2     7    73    62   147    55   149 0.71 Acetyltransferase (GNAT) domain
FR47                 PF08445.5     86 sp|P94482|YNAD_BACSU -            170    0.0068   16.1   0.0   1   1   4.6e-06     0.011   15.4   0.0    30    79    91   142    81   149 0.87 FR47-like protein
MFS_2                PF13347.1    428 sp|P94488|YNAJ_BACSU -            463  1.2e-123  412.7  26.8   1   1  2.8e-127  1.4e-123  412.5  26.8     1   428    13   437    13   437 0.98 MFS/sugar transport protein
MFS_1                PF07690.11   352 sp|P94488|YNAJ_BACSU -            463   5.6e-20   71.3  39.8   1   3   4.5e-10   2.2e-06   26.6  11.8   216   351    23   165    19   166 0.74 Major Facilitator Superfamily
MFS_1                PF07690.11   352 sp|P94488|YNAJ_BACSU -            463   5.6e-20   71.3  39.8   2   3   4.2e-17   2.1e-13   49.7  10.5   117   327   145   353   132   366 0.71 Major Facilitator Superfamily
MFS_1                PF07690.11   352 sp|P94488|YNAJ_BACSU -            463   5.6e-20   71.3  39.8   3   3   0.00013      0.63    8.6   5.2   120   171   367   424   359   451 0.78 Major Facilitator Superfamily
MFS_1_like           PF12832.2     77 sp|P94488|YNAJ_BACSU -            463       3.9    7.3  14.0   1   4   5.5e-05      0.27   11.0   0.3    19    65    34    78    25    89 0.82 MFS_1 like family
SNase                PF00565.12   108 sp|P94492|YNCB_BACSU -            211   3.9e-34  117.1   0.7   2   2   2.1e-37   1.1e-33  115.7   0.1     1   108    89   197    89   197 0.96 Staphylococcal nuclease homologue
Lysis_col            PF02402.11    46 sp|P94492|YNCB_BACSU -            211    0.0068   15.9   0.7   1   1   2.2e-06     0.011   15.3   0.7     1    23     1    24     1    26 0.94 Lysis protein
DUF4179              PF13786.1     94 sp|P94492|YNCB_BACSU -            211     0.064   13.4   1.2   1   1   2.1e-05       0.1   12.8   1.2     9    93     5    88     1    89 0.77 Domain of unknown function (DUF4179)
Sugar_tr             PF00083.19   451 sp|P94493|YNCC_BACSU -            471  1.7e-112  376.3  25.0   1   1  6.5e-116  1.9e-112  376.1  25.0     3   451    16   455    14   455 0.95 Sugar (and other) transporter
MFS_1                PF07690.11   352 sp|P94493|YNCC_BACSU -            471   1.4e-43  148.9  61.8   1   2   1.9e-42   5.7e-39  133.8  29.6     3   342    20   396    18   399 0.84 Major Facilitator Superfamily
MFS_1                PF07690.11   352 sp|P94493|YNCC_BACSU -            471   1.4e-43  148.9  61.8   2   2   1.3e-10   3.8e-07   29.1  24.2    43   178   302   446   300   463 0.79 Major Facilitator Superfamily
MFS_3                PF05977.8    524 sp|P94493|YNCC_BACSU -            471     3e-05   22.3   4.3   1   2     1e-08     3e-05   22.3   4.3   226   355    21   151     7   220 0.84 Transmembrane secretion effector
TRI12                PF06609.8    599 sp|P94493|YNCC_BACSU -            471   6.7e-05   21.2   1.8   1   2   2.3e-08   6.7e-05   21.2   1.8    80   204    52   182    42   214 0.72 Fungal trichothecene efflux pump (TRI12)
MFS_1_like           PF12832.2     77 sp|P94493|YNCC_BACSU -            471    0.0069   16.1   0.0   1   2   2.3e-06    0.0069   16.1   0.0    15    73    31    88    27    92 0.89 MFS_1 like family
dUTPase              PF00692.14   129 sp|O31801|YNCF_BACSU -            144   3.6e-15   55.5   0.0   1   1   5.8e-19   4.3e-15   55.3   0.0    17   126    27   141    18   144 0.88 dUTPase
PapG_N               PF03627.8    226 sp|O31801|YNCF_BACSU -            144     0.078   12.4   0.0   1   1   1.4e-05      0.11   11.9   0.0    85   140    60   113    49   128 0.86 PapG carbohydrate binding domain
AHSA1                PF08327.6    124 sp|O31806|YNDB_BACSU -            144   6.5e-24   84.3   0.8   1   1     1e-27   7.8e-24   84.1   0.8     2   124    20   143    19   143 0.94 Activator of Hsp90 ATPase homolog 1-like protein
Polyketide_cyc2      PF10604.4    139 sp|O31806|YNDB_BACSU -            144   6.7e-08   32.8   0.1   1   1   1.1e-11   8.3e-08   32.4   0.1     3   130    11   129    10   141 0.77 Polyketide cyclase / dehydrase and lipid transport
GerA                 PF03323.8    470 sp|O31808|YNDD_BACSU -            520  4.4e-187  621.8   0.9   1   1  3.4e-191  5.1e-187  621.6   0.9     2   470    38   512    37   512 0.98 Bacillus/Clostridium GerA spore germination protein
Spore_permease       PF03845.8    320 sp|O31809|YNDE_BACSU -            363  2.1e-116  388.0  30.8   1   1  3.5e-120  2.6e-116  387.7  30.8     1   320     7   329     7   329 1.00 Spore germination protein
Spore_GerAC          PF05504.6    171 sp|O31810|YNDF_BACSU -            404   2.2e-46  157.7   7.0   1   1   2.5e-50   3.7e-46  157.0   7.0     2   170   232   401   231   402 0.98 Spore germination B3/ GerAC like, C-terminal
DUF867               PF05908.6    194 sp|O31815|YNDL_BACSU -            252   1.8e-69  232.7   0.2   1   1   4.2e-73   2.1e-69  232.5   0.2     1   193    55   243    55   244 0.99 Protein of unknown function (DUF867)
FMN_dh               PF01070.13   357 sp|O31815|YNDL_BACSU -            252     0.028   13.2   0.0   1   1   7.6e-06     0.038   12.8   0.0   120   166   162   208   145   240 0.84 FMN-dependent dehydrogenase
DUF1077              PF06417.7    126 sp|O31815|YNDL_BACSU -            252     0.042   13.1   0.0   1   1   1.6e-05     0.077   12.3   0.0    41    76    30    66    28    83 0.84 Protein of unknown function (DUF1077)
LysM                 PF01476.15    44 sp|Q45056|YNEA_BACSU -            105   9.9e-11   41.3   0.4   1   1   4.6e-14   1.7e-10   40.6   0.4     2    44    41    90    40    90 0.97 LysM domain
FtsH_ext             PF06480.10   110 sp|Q45056|YNEA_BACSU -            105    0.0017   18.4   0.2   1   1   6.8e-07    0.0025   17.9   0.2     2    56    13    91     8   104 0.66 FtsH Extracellular
YceG                 PF02618.11   297 sp|Q45056|YNEA_BACSU -            105     0.027   13.4   0.0   1   1   8.6e-06     0.032   13.2   0.0     1    47    38    85    38   100 0.87 YceG-like family
HN                   PF00423.14   549 sp|Q45056|YNEA_BACSU -            105     0.095   10.9   0.7   1   1   2.8e-05       0.1   10.8   0.7     5    59     7    64     3    77 0.83 Haemagglutinin-neuraminidase
Resolvase            PF00239.16   141 sp|Q45057|YNEB_BACSU -            217   1.6e-24   86.3   3.1   1   1   5.7e-28   2.1e-24   85.9   3.1     2   139     4   147     3   149 0.91 Resolvase, N terminal domain
PepSY_2              PF13670.1     83 sp|Q45057|YNEB_BACSU -            217    0.0025   17.6   0.1   1   2   0.00024      0.91    9.4   0.1    21    59    14    52     3    57 0.78 Peptidase propeptide and YPEB domain
HTH_32               PF13565.1     77 sp|Q45057|YNEB_BACSU -            217     0.015   16.0   0.0   1   1   9.5e-06     0.035   14.8   0.0     2    75   136   204   135   206 0.70 Homeodomain-like domain
APC_basic            PF05956.6    359 sp|Q45057|YNEB_BACSU -            217     0.066   12.3   0.0   1   1   2.5e-05     0.093   11.8   0.0   163   220     9    65     2    71 0.79 APC basic domain
UPF0154              PF03672.8     64 sp|P45708|YNEF_BACSU -             72   2.7e-34  116.6  10.8   1   1   1.6e-37   3.3e-34  116.3  10.8     1    63     8    70     8    71 0.98 Uncharacterised protein family (UPF0154)
SNARE_assoc          PF09335.6    123 sp|P45708|YNEF_BACSU -             72    0.0078   16.4   0.1   1   1   3.9e-06    0.0084   16.3   0.1    16    44     3    41     1    70 0.70 SNARE associated Golgi protein
DUF897               PF05982.7    327 sp|P45708|YNEF_BACSU -             72    0.0083   14.9   0.8   1   1   4.6e-06    0.0098   14.7   0.8   179   233    10    65     7    70 0.83 Domain of unknown function (DUF897)
FtsX                 PF02687.16   121 sp|P45708|YNEF_BACSU -             72     0.039   13.7   3.0   1   1   3.2e-05     0.069   12.9   3.0    46    80     1    39     1    67 0.75 FtsX-like permease family
LRR19-TM             PF15176.1    102 sp|P45708|YNEF_BACSU -             72     0.044   13.4   0.0   1   1   2.1e-05     0.044   13.4   0.0    19    58     3    40     1    67 0.78 Leucine-rich repeat family 19 TM domain
DUF3042              PF11240.3     54 sp|P45708|YNEF_BACSU -             72     0.085   12.6   0.1   1   2   0.00016      0.33   10.7   0.0     6    30     5    29     2    42 0.89 Protein of unknown function (DUF3042)
HAMP                 PF00672.20    70 sp|P45708|YNEF_BACSU -             72       1.3    9.2   5.6   1   1   0.00015      0.31   11.2   2.1     2    22     7    27     6    31 0.91 HAMP domain
AhpC-TSA             PF00578.16   124 sp|O31820|YNEN_BACSU -            170   1.6e-30  105.3   0.1   1   1   1.6e-33   1.9e-30  105.0   0.1     2   123    36   152    35   153 0.95 AhpC/TSA family
Redoxin              PF08534.5    146 sp|O31820|YNEN_BACSU -            170   2.3e-28   98.5   0.1   1   1   2.4e-31   2.9e-28   98.2   0.1     1   144    34   165    34   168 0.92 Redoxin
Thioredoxin_8        PF13905.1     95 sp|O31820|YNEN_BACSU -            170   2.6e-17   62.7   0.1   1   1   3.4e-20   4.1e-17   62.0   0.1     1    95    59   150    59   150 0.85 Thioredoxin-like
Thioredoxin_2        PF13098.1    112 sp|O31820|YNEN_BACSU -            170   1.2e-15   57.6   0.5   1   1   1.3e-18   1.7e-15   57.2   0.5     3   112    57   167    55   167 0.90 Thioredoxin-like domain
Thioredoxin          PF00085.15   104 sp|O31820|YNEN_BACSU -            170   3.7e-15   55.4   0.7   1   2   1.6e-14     2e-11   43.4   0.2    17    67    58   108    44   116 0.84 Thioredoxin
Thioredoxin          PF00085.15   104 sp|O31820|YNEN_BACSU -            170   3.7e-15   55.4   0.7   2   2   0.00028      0.35   10.5   0.0    62   101   127   167   122   169 0.82 Thioredoxin
SCO1-SenC            PF02630.9    174 sp|O31820|YNEN_BACSU -            170   1.8e-06   27.6   0.2   1   2   1.4e-08   1.8e-05   24.4   0.0     3   117    11   120     9   123 0.76 SCO1/SenC
GSHPx                PF00255.14   108 sp|O31820|YNEN_BACSU -            170   1.4e-05   24.4   0.0   1   1   1.8e-08   2.3e-05   23.7   0.0     3    98    41   132    40   140 0.85 Glutathione peroxidase
Thioredoxin_7        PF13899.1     82 sp|O31820|YNEN_BACSU -            170   0.00037   20.4   0.2   1   1   5.3e-07   0.00066   19.6   0.2    15    67    57   106    52   145 0.75 Thioredoxin-like
TraF                 PF13728.1    215 sp|O31820|YNEN_BACSU -            170   0.00044   19.8   0.1   1   1   3.2e-06     0.004   16.6   0.1   111   213    50   166    35   167 0.77 F plasmid transfer operon protein
T4_deiodinase        PF00837.12   237 sp|O31820|YNEN_BACSU -            170    0.0031   16.5   0.0   1   1   3.2e-06     0.004   16.2   0.0    73   145    33   102    16   117 0.82 Iodothyronine deiodinase
YtfJ_HI0045          PF09695.5    160 sp|O31820|YNEN_BACSU -            170     0.049   12.9   0.2   1   1   7.9e-05     0.098   11.9   0.2   109   156   124   169    81   169 0.75 Bacterial protein of unknown function (YtfJ_HI0045)
SpoVAE               PF14097.1    180 sp|O31820|YNEN_BACSU -            170     0.058   12.8   0.0   1   1   6.4e-05     0.079   12.3   0.0    78   160    84   165    71   169 0.87 Stage V sporulation protein AE1
4HBT                 PF03061.17    79 sp|Q45061|YNEP_BACSU -            138     2e-15   56.6   0.0   1   1   5.2e-19   2.6e-15   56.3   0.0     1    77    18   101    18   103 0.97 Thioesterase superfamily
4HBT_2               PF13279.1    121 sp|Q45061|YNEP_BACSU -            138   1.4e-08   35.1   0.0   1   1   3.5e-12   1.7e-08   34.9   0.0     1   119    10   124    10   131 0.88 Thioesterase-like superfamily
Acyl-ACP_TE          PF01643.12   261 sp|Q45061|YNEP_BACSU -            138   1.7e-06   27.1   0.1   1   1   1.6e-09   7.9e-06   24.9   0.0    53   127    47   120     3   128 0.86 Acyl-ACP thioesterase
Fe-S_biosyn          PF01521.15   112 sp|Q45063|YNER_BACSU -             95   2.8e-07   30.4   0.0   1   1   2.1e-11   3.1e-07   30.3   0.0     1    83     1    77     1    93 0.89 Iron-sulphur cluster biosynthesis
GtrA                 PF04138.9    117 sp|O31821|YNGA_BACSU -            148   2.7e-29  101.5   5.9   1   1   9.7e-32   1.4e-27   95.9   7.2     1   117    24   137    24   137 0.96 GtrA-like protein
NTP_transferase      PF00483.18   248 sp|O31822|YNGB_BACSU -            297   5.2e-32  111.0   0.0   1   1   2.3e-35   6.8e-32  110.7   0.0     1   234     7   258     7   269 0.90 Nucleotidyl transferase
NTP_transf_3         PF12804.2    160 sp|O31822|YNGB_BACSU -            297   2.9e-10   40.4   0.0   1   1   1.2e-13   3.6e-10   40.1   0.0     1   119     8   158     8   291 0.84 MobA-like NTP transferase domain
Glycos_transf_2      PF00535.21   169 sp|O31822|YNGB_BACSU -            297   0.00055   19.6   0.0   1   1     3e-07   0.00089   18.9   0.0    40   122    86   169    82   206 0.85 Glycosyl transferase family 2
IspD                 PF01128.14   221 sp|O31822|YNGB_BACSU -            297     0.027   14.0   0.0   1   1   1.8e-05     0.052   13.0   0.0     3    55     8    62     7    77 0.80 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase
CTP_transf_3         PF02348.14   217 sp|O31822|YNGB_BACSU -            297     0.081   12.5   0.0   1   1   4.4e-05      0.13   11.8   0.0    16    46    28    58    24   106 0.84 Cytidylyltransferase
SNARE_assoc          PF09335.6    123 sp|O31823|YNGC_BACSU -            198   4.2e-28   98.0   7.9   1   1   8.5e-32   4.2e-28   98.0   7.9     1   122    29   155    29   156 0.98 SNARE associated Golgi protein
Chal_sti_synt_C      PF02797.10   151 sp|O31823|YNGC_BACSU -            198       0.1   12.4   0.0   1   1   3.3e-05      0.16   11.8   0.0    61   100    67   106    59   120 0.89 Chalcone and stilbene synthases, C-terminal domain
DUF1467              PF07330.7     85 sp|O31823|YNGC_BACSU -            198      0.19   11.5   0.3   1   2   3.7e-05      0.19   11.5   0.3     6    40   137   171   133   174 0.89 Protein of unknown function (DUF1467)
Carboxyl_trans       PF01039.17   493 sp|O31825|YNGE_BACSU -            511  1.9e-171  570.7   0.0   1   1    6e-175  2.2e-171  570.5   0.0     2   492    28   508    27   509 0.98 Carboxyl transferase domain
MdcE                 PF06833.6    234 sp|O31825|YNGE_BACSU -            511   2.9e-05   23.3   1.1   2   2   1.5e-06    0.0055   15.9   0.2    20   147   304   431   296   450 0.75 Malonate decarboxylase gamma subunit (MdcE)
Cadherin_2           PF08266.7     84 sp|O31825|YNGE_BACSU -            511     0.067   12.7   0.1   1   2   0.00026      0.98    9.0   0.1    32    62    10    40     6    42 0.92 Cadherin-like
ECH                  PF00378.15   245 sp|O34893|YNGF_BACSU -            260   4.8e-67  225.6   2.5   1   1   7.7e-71   5.7e-67  225.3   2.5     5   245    11   252     8   252 0.98 Enoyl-CoA hydratase/isomerase family
AMP-binding          PF00501.23   417 sp|O31826|YNGI_BACSU -            549  2.1e-102  342.6   0.3   1   1  3.4e-106  2.5e-102  342.3   0.3     2   416    14   445    13   446 0.84 AMP-binding enzyme
AMP-binding_C        PF13193.1     73 sp|O31826|YNGI_BACSU -            549     3e-14   53.7   0.0   1   1   9.7e-18   7.2e-14   52.4   0.0     1    73   454   529   454   529 0.91 AMP-binding enzyme C-terminal domain
DUF187               PF02638.10   311 sp|O35015|YNGK_BACSU -            510  1.5e-134  447.8   8.7   1   1  5.6e-138  2.1e-134  447.3   8.7     1   311    35   356    35   356 0.99 Glycosyl hydrolase like GH101
GHL6                 PF14871.1    132 sp|O35015|YNGK_BACSU -            510   0.00068   19.6   0.4   1   1     1e-06    0.0038   17.2   0.0     5   131    67   200    63   201 0.71 Hypothetical glycosyl hydrolase 6
Melibiase            PF02065.13   394 sp|O35015|YNGK_BACSU -            510    0.0016   17.2   0.4   1   1     9e-07    0.0033   16.1   0.4   106   204   115   214   101   238 0.74 Melibiase
DUF4434              PF14488.1    166 sp|O35015|YNGK_BACSU -            510     0.035   13.8   0.0   1   1   3.3e-05      0.12   12.0   0.0    19    83    61   131    50   171 0.69 Domain of unknown function (DUF4434)
DUF1360              PF07098.6    105 sp|O34506|YNGL_BACSU -            130   2.5e-38  130.0   0.2   1   1   4.1e-42     3e-38  129.7   0.2     1   104    11   109    11   110 0.98 Protein of unknown function (DUF1360)
DUF2367              PF10164.4     98 sp|O34506|YNGL_BACSU -            130     0.054   13.3   0.1   1   1   1.2e-05     0.087   12.6   0.1    51    79    53    80    36    90 0.83 Uncharacterized conserved protein (DUF2367)
DUF896               PF05979.7     65 sp|O31818|YNZC_BACSU -             77   3.2e-31  106.7   1.3   1   1   2.6e-35   3.8e-31  106.4   1.3     2    65     5    68     4    68 0.98 Bacterial protein of unknown function (DUF896)
SpoOE-like           PF09388.5     45 sp|O31819|YNZD_BACSU -             57   4.5e-20   70.8   4.6   1   1   3.5e-24   5.1e-20   70.7   4.6     1    44     5    48     5    49 0.97 Spo0E like sporulation regulatory protein
bPH_5                PF10882.3    100 sp|O31800|YNZG_BACSU -             83     3e-05   23.7   0.4   1   1   9.3e-09   6.9e-05   22.5   0.4     6    72     9    76     4    81 0.82 Bacterial PH domain
Rib                  PF08428.5     65 sp|O31800|YNZG_BACSU -             83     0.067   12.9   0.0   1   1   1.2e-05     0.087   12.5   0.0    34    60    35    61    16    63 0.90 Rib/alpha-like repeat
Acetyltransf_3       PF13302.1    142 sp|O34569|YOAA_BACSU -            177     1e-33  116.4   0.1   1   1   4.1e-37   1.2e-33  116.2   0.1     1   142     9   149     9   149 0.91 Acetyltransferase (GNAT) domain
Acetyltransf_4       PF13420.1    155 sp|O34569|YOAA_BACSU -            177   4.7e-17   62.3   0.1   1   1   1.8e-20   5.4e-17   62.1   0.1     1   154    12   168    12   169 0.92 Acetyltransferase (GNAT) domain
Acetyltransf_1       PF00583.19    83 sp|O34569|YOAA_BACSU -            177   4.4e-11   42.6   0.1   1   1   2.3e-14   6.8e-11   42.0   0.1     3    83    72   149    70   149 0.96 Acetyltransferase (GNAT) family
FR47                 PF08445.5     86 sp|O34569|YOAA_BACSU -            177   0.00013   21.6   0.0   1   1   1.2e-07   0.00035   20.2   0.0    28    80    97   151    65   158 0.80 FR47-like protein
Acetyltransf_8       PF13523.1    152 sp|O34569|YOAA_BACSU -            177     0.016   15.1   0.0   1   1   2.1e-05     0.063   13.1   0.0    88   141   100   153     9   160 0.74 Acetyltransferase (GNAT) domain
MFS_1                PF07690.11   352 sp|O34864|YOAB_BACSU -            414   2.4e-28   98.8  60.4   1   2   2.3e-20   1.1e-16   60.4  28.5     2   241    15   253    11   263 0.85 Major Facilitator Superfamily
MFS_1                PF07690.11   352 sp|O34864|YOAB_BACSU -            414   2.4e-28   98.8  60.4   2   2   6.3e-15   3.1e-11   42.5  26.1    41   173   262   398   255   412 0.82 Major Facilitator Superfamily
Sugar_tr             PF00083.19   451 sp|O34864|YOAB_BACSU -            414   0.00012   20.8  42.5   1   1   1.8e-06    0.0089   14.6  42.5    46   440    44   402    12   410 0.80 Sugar (and other) transporter
MFS_2                PF13347.1    428 sp|O34864|YOAB_BACSU -            414     0.045   12.1  41.3   1   3   9.1e-06     0.045   12.1  11.4   257   338    42   126     9   131 0.76 MFS/sugar transport protein
MFS_2                PF13347.1    428 sp|O34864|YOAB_BACSU -            414     0.045   12.1  41.3   2   3   8.4e-05      0.42    8.9  13.4   151   330   139   327   132   345 0.66 MFS/sugar transport protein
FGGY_N               PF00370.16   245 sp|O34861|YOAC_BACSU -            487   5.8e-42  143.6   0.0   1   1   6.8e-45   1.7e-41  142.1   0.0     2   243     7   244     6   245 0.92 FGGY family of carbohydrate kinases, N-terminal domain
FGGY_C               PF02782.11   198 sp|O34861|YOAC_BACSU -            487   8.5e-14   51.6   0.0   1   1   6.1e-17   1.5e-13   50.8   0.0   109   193   351   438   254   442 0.76 FGGY family of carbohydrate kinases, C-terminal domain
MreB_Mbl             PF06723.8    327 sp|O34861|YOAC_BACSU -            487    0.0029   16.2   2.9   1   3   3.2e-05      0.08   11.5   0.1   142   169     2    29     1    36 0.88 MreB/Mbl protein
CDI                  PF02234.14    51 sp|O34861|YOAC_BACSU -            487     0.014   15.1   0.0   1   1   1.6e-05     0.039   13.7   0.0    15    48   367   399   359   400 0.81 Cyclin-dependent kinase inhibitor
RUN                  PF02759.14   133 sp|O34861|YOAC_BACSU -            487      0.08   12.6   0.0   1   1   0.00011      0.28   10.9   0.0    66   108   392   435   299   451 0.82 RUN domain
DUF3939              PF13075.1    140 sp|O34861|YOAC_BACSU -            487      0.11   12.2   1.3   1   2   0.00011      0.27   10.9   0.0    56    95   306   344   300   349 0.87 Protein of unknown function (DUF3939)
2-Hacid_dh_C         PF02826.14   178 sp|O34815|YOAD_BACSU -            344   6.3e-55  185.0   0.0   1   1   5.4e-58   1.1e-54  184.2   0.0     2   178   124   302   123   302 0.95 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain
2-Hacid_dh           PF00389.25   133 sp|O34815|YOAD_BACSU -            344     1e-12   47.6   0.0   1   1   6.1e-16   1.3e-12   47.3   0.0     1   122    14   323    14   333 0.78 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain
NAD_binding_2        PF03446.10   163 sp|O34815|YOAD_BACSU -            344   0.00085   19.2   0.0   1   1   7.9e-07    0.0017   18.2   0.0     2   112   164   268   163   274 0.87 NAD binding domain of 6-phosphogluconate dehydrogenase
NAD_binding_7        PF13241.1    103 sp|O34815|YOAD_BACSU -            344    0.0059   16.8   0.0   1   1   6.4e-06     0.014   15.6   0.0     5    65   161   219   159   259 0.70 Putative NAD(P)-binding
AdoHcyase_NAD        PF00670.16   162 sp|O34815|YOAD_BACSU -            344     0.042   13.6   0.0   1   1   4.9e-05       0.1   12.4   0.0    21   109   161   249   155   268 0.85 S-adenosyl-L-homocysteine hydrolase, NAD binding domain
UDPG_MGDP_dh_C       PF03720.10   106 sp|O34815|YOAD_BACSU -            344     0.055   13.6   0.0   1   1   6.5e-05      0.14   12.3   0.0    21   100   177   249   173   256 0.72 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain
ELFV_dehydrog        PF00208.16   244 sp|O34815|YOAD_BACSU -            344      0.07   12.7   0.0   1   1   5.5e-05      0.12   11.9   0.0    21    57   152   188   148   208 0.88 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase
Molybdopterin        PF00384.17   432 sp|C0SP82|YOAE_BACSU -            680   3.4e-60  203.9   0.0   1   1   1.4e-63   6.9e-60  202.9   0.0     1   431    67   473    67   474 0.87 Molybdopterin oxidoreductase
Molydop_binding      PF01568.16   110 sp|C0SP82|YOAE_BACSU -            680   5.2e-18   64.8   0.0   1   1   2.2e-21   1.1e-17   63.8   0.0     2   106   566   670   565   672 0.93 Molydopterin dinucleotide binding domain
Molybdop_Fe4S4       PF04879.11    55 sp|C0SP82|YOAE_BACSU -            680   5.2e-17   61.3   0.4   1   1     3e-20   1.5e-16   59.9   0.4     5    54    13    63    11    64 0.97 Molybdopterin oxidoreductase Fe4S4 domain
DUF1049              PF06305.6     68 sp|O31830|YOAG_BACSU -            134     0.019   14.4   0.4   2   3     5e-06     0.019   14.4   0.4    25    53    42    70    28    72 0.90 Protein of unknown function (DUF1049)
DUF1129              PF06570.6    206 sp|O31830|YOAG_BACSU -            134     0.076   12.3  17.2   1   1   3.1e-05      0.12   11.7  17.2    87   197     9   121     2   124 0.83 Protein of unknown function (DUF1129)
PalH                 PF08733.5    348 sp|O31830|YOAG_BACSU -            134      0.57    8.9  14.1   1   1   0.00019      0.69    8.6  14.1   231   314    34   121    18   128 0.80 PalH/RIM21
Viral_Beta_CD        PF04530.7    122 sp|O31830|YOAG_BACSU -            134       2.5    8.3   5.7   2   2   0.00017      0.62   10.2   2.3    43    86    66   108    55   116 0.80 Viral Beta C/D like family
HpaB_N               PF11794.3    264 sp|C0SPC0|YOAI_BACSU -            483   9.8e-80  267.7   0.0   1   1   2.8e-83   1.4e-79  267.2   0.0     1   264     5   272     5   272 0.97 4-hydroxyphenylacetate 3-hydroxylase N terminal
HpaB                 PF03241.8    205 sp|C0SPC0|YOAI_BACSU -            483   1.7e-69  232.8   0.0   1   1   4.4e-73   2.2e-69  232.4   0.0     1   204   277   478   277   479 0.99 4-hydroxyphenylacetate 3-hydroxylase C terminal
Selenoprotein_S      PF06936.6    190 sp|C0SPC0|YOAI_BACSU -            483      0.16   11.4   0.0   1   1   5.7e-05      0.28   10.6   0.0   103   157    75   128    67   134 0.85 Selenoprotein S (SelS)
DUF1275              PF06912.6    209 sp|O34343|YOAK_BACSU -            225   3.8e-44  150.3  23.3   1   1   5.9e-48   4.4e-44  150.1  23.3     2   207     9   216     8   218 0.96 Protein of unknown function (DUF1275)
3Beta_HSD            PF01073.14   280 sp|O34343|YOAK_BACSU -            225     0.076   11.7   0.1   1   1   1.4e-05      0.11   11.2   0.1    69   121    13    65     5    94 0.89 3-beta hydroxysteroid dehydrogenase/isomerase family
DUF159               PF02586.9    208 sp|O34906|YOAM_BACSU -            227   1.9e-61  207.2   0.0   1   1   1.4e-65   2.1e-61  207.0   0.0     1   207     1   217     1   218 0.94 Uncharacterised ACR, COG2135
YoaP                 PF14268.1     44 sp|O34983|YOAP_BACSU -            251   2.6e-20   71.3   0.2   1   1   2.6e-23   4.9e-20   70.4   0.2     1    44   202   245   202   245 0.98 YoaP-like
Acetyltransf_1       PF00583.19    83 sp|O34983|YOAP_BACSU -            251   7.1e-10   38.7   0.0   1   1   6.1e-13   1.1e-09   38.1   0.0    11    83    57   135    35   135 0.89 Acetyltransferase (GNAT) family
Acetyltransf_7       PF13508.1     79 sp|O34983|YOAP_BACSU -            251    0.0031   17.6   0.0   1   1   3.5e-06    0.0066   16.5   0.0    24    78    72   135    12   136 0.80 Acetyltransferase (GNAT) domain
Acetyltransf_CG      PF14542.1     78 sp|O34983|YOAP_BACSU -            251    0.0089   15.8   0.0   1   2   2.8e-05     0.052   13.4   0.0    12    56    55   108    46   113 0.76 GCN5-related N-acetyl-transferase
DUF393               PF04134.7    114 sp|O34983|YOAP_BACSU -            251     0.059   14.4   0.0   1   1   7.6e-05      0.14   13.2   0.0     1    45   176   220   176   225 0.92 Protein of unknown function, DUF393
NT5C                 PF06941.7    191 sp|O34983|YOAP_BACSU -            251     0.059   12.8   0.1   1   1   5.4e-05       0.1   12.1   0.1    90   118    12    40     3    57 0.78 5' nucleotidase, deoxy (Pyrimidine), cytosolic type C protein (NT5C)
Glutaredoxin         PF00462.19    60 sp|O34983|YOAP_BACSU -            251       0.1   12.5   0.1   1   1    0.0002      0.37   10.8   0.0     1    39   174   216   174   233 0.84 Glutaredoxin
Acetyltransf_10      PF13673.1    117 sp|O34983|YOAP_BACSU -            251      0.11   12.6   0.0   1   1   9.3e-05      0.17   11.9   0.0    67   117    77   134    14   134 0.68 Acetyltransferase (GNAT) domain
EamA                 PF00892.15   126 sp|O34416|YOAV_BACSU -            292     2e-52  176.5  35.5   1   2   1.2e-28     3e-25   88.6   9.9     1   125    13   136    13   137 0.97 EamA-like transporter family
EamA                 PF00892.15   126 sp|O34416|YOAV_BACSU -            292     2e-52  176.5  35.5   2   2   2.4e-30     6e-27   94.1  17.6     1   125   159   284   159   285 0.98 EamA-like transporter family
EmrE                 PF13536.1    113 sp|O34416|YOAV_BACSU -            292   1.7e-05   24.9  36.5   1   3   1.2e-08     3e-05   24.1   3.6     5   104    40   135    35   143 0.83 Multidrug resistance efflux transporter
TPT                  PF03151.11   153 sp|O34416|YOAV_BACSU -            292   0.00045   19.8  30.9   2   2   9.2e-07    0.0023   17.6  17.9     2   150   151   282   150   283 0.91 Triose-phosphate Transporter family
Glyco_transf_5       PF08323.6    245 sp|O34416|YOAV_BACSU -            292     0.012   15.1   0.2   1   1   7.4e-06     0.018   14.5   0.2   116   151   156   192   135   205 0.89 Starch synthase catalytic domain
IncA                 PF04156.9    191 sp|O34416|YOAV_BACSU -            292       2.6    7.5   4.5   1   1   0.00031      0.76    9.3   0.6     9    30   266   287   265   289 0.86 IncA protein
DJ-1_PfpI            PF01965.19   147 sp|O34947|YOAZ_BACSU -            210   5.3e-21   74.6   0.0   1   1   1.3e-24   6.5e-21   74.3   0.0     4   146    41   178    38   179 0.86 DJ-1/PfpI family
DUF4066              PF13278.1    166 sp|O34947|YOAZ_BACSU -            210   2.1e-12   46.6   0.0   1   1   5.1e-16   2.5e-12   46.3   0.0    28   154    37   165    10   175 0.85 Putative amidotransferase
GATase_3             PF07685.9    158 sp|O34947|YOAZ_BACSU -            210     0.047   13.2   0.1   1   1   1.4e-05     0.069   12.7   0.1     4    57    69   118    66   138 0.83 CobB/CobQ-like glutamine amidotransferase domain
DUF159               PF02586.9    208 sp|O34915|YOBE_BACSU -            219   2.1e-57  193.9   0.0   1   1   1.7e-61   2.5e-57  193.7   0.0     1   202     1   212     1   217 0.90 Uncharacterised ACR, COG2135
IMS_C                PF11799.3    127 sp|C0SPA8|YOBH_BACSU -            217   3.3e-13   49.6   0.0   1   1   2.1e-16   6.3e-13   48.7   0.0    13    97   127   211   123   216 0.90 impB/mucB/samB family C-terminal domain
IMS_HHH              PF11798.3     32 sp|C0SPA8|YOBH_BACSU -            217   1.1e-08   34.6   0.0   1   1   9.4e-12   2.8e-08   33.3   0.0     1    32    48    80    48    80 0.97 IMS family HHH motif
IMS                  PF00817.15   149 sp|C0SPA8|YOBH_BACSU -            217   1.5e-05   24.8   0.1   1   2   1.8e-07   0.00053   19.7   0.0   118   148     2    32     1    33 0.94 impB/mucB/samB family
HHH_5                PF14520.1     60 sp|C0SPA8|YOBH_BACSU -            217   4.6e-05   23.5   0.0   1   1   3.3e-08   9.8e-05   22.4   0.0     6    46    60   100    56   131 0.93 Helix-hairpin-helix domain
Cdd1                 PF11731.3     93 sp|C0SPA8|YOBH_BACSU -            217     0.066   13.1   0.0   1   1     4e-05      0.12   12.3   0.0    10    50    57    96    19   105 0.80 Pathogenicity locus
Amino_oxidase        PF01593.19   450 sp|O34363|YOBN_BACSU -            478   1.2e-70  238.8   0.0   1   1   1.4e-73   1.4e-70  238.6   0.0     1   449    33   474    33   475 0.94 Flavin containing amine oxidoreductase
NAD_binding_8        PF13450.1     68 sp|O34363|YOBN_BACSU -            478   1.3e-10   41.1   0.0   1   1   2.9e-13   2.9e-10   40.0   0.0     1    52    28    82    28    96 0.84 NAD(P)-binding Rossmann-like domain
Pyr_redox            PF00070.22    80 sp|O34363|YOBN_BACSU -            478   4.5e-06   26.9   0.4   1   1     3e-08     3e-05   24.3   0.6     1    34    25    58    25    64 0.92 Pyridine nucleotide-disulphide oxidoreductase
DAO                  PF01266.19   358 sp|O34363|YOBN_BACSU -            478   2.8e-05   23.2   1.0   1   1   5.1e-08     5e-05   22.3   1.0     1    36    25    60    25    67 0.93 FAD dependent oxidoreductase
FAD_binding_2        PF00890.19   417 sp|O34363|YOBN_BACSU -            478   9.9e-05   21.3   0.4   1   1   1.5e-07   0.00015   20.7   0.4     2    36    26    60    25    69 0.92 FAD binding domain
Pyr_redox_3          PF13738.1    203 sp|O34363|YOBN_BACSU -            478   0.00019   21.5   0.0   1   2   1.9e-05     0.019   15.0   0.0     1    40    27    65    27   105 0.87 Pyridine nucleotide-disulphide oxidoreductase
HI0933_like          PF03486.9    409 sp|O34363|YOBN_BACSU -            478   0.00068   18.2   0.4   1   1   1.2e-06    0.0011   17.4   0.4     2    38    25    61    24    64 0.91 HI0933-like protein
FAD_binding_3        PF01494.14   356 sp|O34363|YOBN_BACSU -            478   0.00094   18.3   1.1   1   1   9.5e-07   0.00094   18.3   1.1     4    33    26    55    24    61 0.92 FAD binding domain
Pyr_redox_2          PF07992.9    201 sp|O34363|YOBN_BACSU -            478    0.0027   17.6   0.0   1   1   4.3e-06    0.0043   16.9   0.0     2    46    26    70    25   123 0.81 Pyridine nucleotide-disulphide oxidoreductase
AlaDh_PNT_C          PF01262.16   168 sp|O34363|YOBN_BACSU -            478    0.0085   15.6   0.0   1   1   1.4e-05     0.013   15.0   0.0    10    50    13    53     4    58 0.86 Alanine dehydrogenase/PNT, C-terminal domain
Thi4                 PF01946.12   230 sp|O34363|YOBN_BACSU -            478    0.0085   15.2   0.2   1   1   1.5e-05     0.015   14.4   0.2    19    54    25    60     9    67 0.91 Thi4 family
GIDA                 PF01134.17   392 sp|O34363|YOBN_BACSU -            478     0.029   13.2   0.8   1   1   6.1e-05      0.06   12.1   0.8     2    40    26    63    25    66 0.85 Glucose inhibited division protein A
3HCDH_N              PF02737.13   180 sp|O34363|YOBN_BACSU -            478      0.07   12.7   0.3   1   1   0.00012      0.12   12.0   0.3     1    31    25    55    25    63 0.91 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain
FAD_oxidored         PF12831.2    428 sp|O34363|YOBN_BACSU -            478     0.074   12.1   0.0   1   1   0.00012      0.12   11.4   0.0     2    38    26    62    25   127 0.93 FAD dependent oxidoreductase
UDPG_MGDP_dh_N       PF03721.9    185 sp|O34363|YOBN_BACSU -            478      0.19   11.0   0.1   1   1    0.0003       0.3   10.4   0.1     2    31    25    54    24    69 0.91 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain
Acetyltransf_1       PF00583.19    83 sp|O34376|YOBR_BACSU -            247   2.2e-15   56.4   0.1   2   2   1.8e-17   3.3e-14   52.6   0.0    10    82   169   235   136   236 0.87 Acetyltransferase (GNAT) family
Acetyltransf_7       PF13508.1     79 sp|O34376|YOBR_BACSU -            247   1.4e-09   38.0   0.0   2   2   5.6e-11     1e-07   31.9   0.0     4    78   156   236   154   237 0.85 Acetyltransferase (GNAT) domain
FR47                 PF08445.5     86 sp|O34376|YOBR_BACSU -            247   1.7e-09   37.2   0.1   1   1   1.8e-12   3.3e-09   36.3   0.1    17    85   174   244   160   245 0.82 FR47-like protein
Acetyltransf_4       PF13420.1    155 sp|O34376|YOBR_BACSU -            247   8.7e-07   29.0   0.0   1   1   9.6e-10   1.8e-06   28.0   0.0    37   138   144   239   101   246 0.83 Acetyltransferase (GNAT) domain
Acetyltransf_3       PF13302.1    142 sp|O34376|YOBR_BACSU -            247   9.4e-07   29.0   0.0   1   1   6.9e-10   1.3e-06   28.6   0.0    59   141   158   235   102   236 0.78 Acetyltransferase (GNAT) domain
Acetyltransf_8       PF13523.1    152 sp|O34376|YOBR_BACSU -            247     3e-06   27.1   0.0   1   1   2.2e-09   4.1e-06   26.7   0.0    72   142   167   241   109   247 0.79 Acetyltransferase (GNAT) domain
Acetyltransf_10      PF13673.1    117 sp|O34376|YOBR_BACSU -            247    0.0001   22.3   0.1   2   2   6.3e-07    0.0012   18.9   0.0     5   117   101   235    98   235 0.75 Acetyltransferase (GNAT) domain
Acetyltransf_9       PF13527.1    127 sp|O34376|YOBR_BACSU -            247    0.0045   16.8   0.0   1   1     7e-06     0.013   15.3   0.0    72   126   178   237   174   238 0.92 Acetyltransferase (GNAT) domain
Lactamase_B          PF00753.22   194 sp|O34910|YOBT_BACSU -            233     5e-25   88.3   0.0   1   1   1.1e-28   5.4e-25   88.1   0.0     3   153    18   170    16   212 0.90 Metallo-beta-lactamase superfamily
Lactamase_B_2        PF12706.2    194 sp|O34910|YOBT_BACSU -            233     3e-05   23.6   0.0   1   1   7.2e-09   3.5e-05   23.4   0.0    22   118    48   149    29   226 0.56 Beta-lactamase superfamily domain
Lactamase_B_3        PF13483.1    163 sp|O34910|YOBT_BACSU -            233     0.011   15.3   0.0   1   1   3.2e-06     0.016   14.9   0.0     7    67    21    88    17   139 0.73 Beta-lactamase superfamily domain
Peptidase_S66        PF02016.10   284 sp|O35046|YOCD_BACSU -            325   9.2e-78  261.0   0.0   1   1   1.4e-81     1e-77  260.8   0.0     1   284    12   312    12   312 0.98 LD-carboxypeptidase
Herpes_U5            PF05999.6    456 sp|O35046|YOCD_BACSU -            325     0.099   11.2   0.0   1   1   2.1e-05      0.15   10.5   0.0   145   206   232   292   228   299 0.84 Herpesvirus U5-like family
HSP20                PF00011.16   102 sp|O34321|YOCM_BACSU -            158     1e-08   34.9   0.0   1   1   1.7e-12   1.3e-08   34.6   0.0     2    93    62   152    61   157 0.87 Hsp20/alpha crystallin family
DUF3189              PF11385.3    148 sp|O34321|YOCM_BACSU -            158     0.072   12.6   0.0   1   1   1.5e-05      0.11   12.0   0.0    96   137    62   103    57   111 0.92 Protein of unknown function (DUF3189)
SNF                  PF00209.13   523 sp|O34383|YOCR_BACSU -            445   2.7e-54  184.5  43.8   1   2   1.5e-31   2.2e-27   95.7  10.6     2   118     5   123     4   138 0.94 Sodium:neurotransmitter symporter family
SNF                  PF00209.13   523 sp|O34383|YOCR_BACSU -            445   2.7e-54  184.5  43.8   2   2   2.9e-31   4.3e-27   94.7  25.3   182   479   148   441   132   445 0.80 Sodium:neurotransmitter symporter family
SBF                  PF01758.11   187 sp|O34524|YOCS_BACSU -            321   3.7e-55  186.2  18.0   1   2   1.2e-58   3.7e-55  186.2  18.0     1   186    41   220    41   221 0.98 Sodium Bile acid symporter family
DUF4137              PF13593.1    313 sp|O34524|YOCS_BACSU -            321   3.7e-21   75.5  27.0   1   1   1.5e-24   4.4e-21   75.3  27.0     1   312    13   304    13   305 0.87 SBF-like CPA transporter family (DUF4137)
Mem_trans            PF03547.13   385 sp|O34524|YOCS_BACSU -            321   0.00051   18.4  11.9   1   3   1.7e-07   0.00051   18.4  11.9   254   384    20   146    16   147 0.85 Membrane transport protein
DUF303               PF03629.13   255 sp|O34524|YOCS_BACSU -            321     0.045   12.9   0.0   1   1   2.3e-05     0.068   12.3   0.0    54    98    66   114    46   127 0.78 Domain of unknown function (DUF303)
Birna_VP4            PF01768.11   264 sp|O34524|YOCS_BACSU -            321     0.062   12.3   0.2   1   1   2.1e-05     0.062   12.3   0.2   197   261    52   122    41   123 0.85 Birnavirus VP4 protein
Nitroreductase       PF00881.19   165 sp|P81102|YODC_BACSU -            202   1.6e-30  106.1   0.1   1   1     6e-34   2.2e-30  105.6   0.1     1   165     8   182     8   182 0.90 Nitroreductase family
Xlink                PF00193.12    92 sp|P81102|YODC_BACSU -            202     0.011   15.7   0.2   2   2   1.7e-05     0.065   13.3   0.1    24    54   129   159   114   169 0.84 Extracellular link domain
DUF1246              PF06849.7    124 sp|P81102|YODC_BACSU -            202     0.028   14.1   0.0   1   1   1.7e-05     0.064   13.0   0.0     5    45   133   173   130   190 0.90 Protein of unknown function (DUF1246)
SSF                  PF00474.12   406 sp|O34745|YODF_BACSU -            496   9.8e-22   77.1  30.4   1   1   1.1e-25   1.7e-21   76.3  30.4     3   406    40   432    38   432 0.84 Sodium:solute symporter family
Methyltransf_11      PF08241.7     95 sp|O34954|YODH_BACSU -            233   3.9e-19   68.9   0.0   1   1   6.5e-22   6.5e-19   68.2   0.0     1    94    40   133    40   134 0.97 Methyltransferase domain
Methyltransf_31      PF13847.1    152 sp|O34954|YODH_BACSU -            233   3.4e-16   59.1   0.0   1   1   4.5e-19   4.4e-16   58.8   0.0     3   132    35   160    33   187 0.86 Methyltransferase domain
Methyltransf_25      PF13649.1    101 sp|O34954|YODH_BACSU -            233   6.7e-14   52.0   0.0   1   1   1.1e-16   1.1e-13   51.4   0.0     1   101    39   130    39   130 0.92 Methyltransferase domain
Methyltransf_23      PF13489.1    161 sp|O34954|YODH_BACSU -            233   5.8e-12   45.6   0.0   1   1   7.9e-15   7.9e-12   45.1   0.0    17   160    32   179    21   180 0.79 Methyltransferase domain
Ubie_methyltran      PF01209.13   233 sp|O34954|YODH_BACSU -            233   4.7e-11   42.2   0.0   1   1   6.4e-14   6.3e-11   41.8   0.0    39   155    27   138    20   176 0.87 ubiE/COQ5 methyltransferase family
Methyltransf_12      PF08242.7     99 sp|O34954|YODH_BACSU -            233   2.9e-09   37.2   0.0   1   1   4.6e-12   4.6e-09   36.6   0.0     1    99    40   132    40   132 0.90 Methyltransferase domain
Methyltransf_18      PF12847.2    112 sp|O34954|YODH_BACSU -            233   3.2e-09   37.3   0.0   1   1   5.1e-12     5e-09   36.7   0.0     3   108    37   133    35   136 0.90 Methyltransferase domain
TehB                 PF03848.9    192 sp|O34954|YODH_BACSU -            233   3.3e-07   29.6   0.0   1   1   4.4e-10   4.4e-07   29.2   0.0    34   108    39   114    25   165 0.87 Tellurite resistance protein TehB
Methyltransf_26      PF13659.1    117 sp|O34954|YODH_BACSU -            233   7.8e-07   29.1   0.0   1   1     2e-09   1.9e-06   27.8   0.0     4   111    39   132    36   137 0.89 Methyltransferase domain
RrnaAD               PF00398.15   262 sp|O34954|YODH_BACSU -            233   2.4e-06   26.7   0.0   1   1   3.1e-09   3.1e-06   26.4   0.0    21    76    26    80    22   204 0.89 Ribosomal RNA adenine dimethylase
Methyltransf_29      PF03141.11   506 sp|O34954|YODH_BACSU -            233   0.00095   17.6   0.0   1   1   1.1e-06     0.001   17.4   0.0   119   245    37   159    21   207 0.79 Putative S-adenosyl-L-methionine-dependent methyltransferase
MTS                  PF05175.9    170 sp|O34954|YODH_BACSU -            233    0.0017   17.7   0.0   1   1   2.6e-06    0.0025   17.1   0.0    23    91    28    92    14   140 0.82 Methyltransferase small domain
UPF0020              PF01170.13   180 sp|O34954|YODH_BACSU -            233     0.031   13.8   0.0   1   2   0.00017      0.17   11.4   0.0    17   111    24   105    16   108 0.79 Putative RNA methylase family UPF0020
DUF938               PF06080.7    204 sp|O34954|YODH_BACSU -            233     0.033   13.7   0.0   1   1     5e-05     0.049   13.1   0.0    16    56    26    66    23   133 0.89 Protein of unknown function (DUF938)
NodS                 PF05401.6    201 sp|O34954|YODH_BACSU -            233      0.18   11.1   0.0   1   1   0.00026      0.26   10.6   0.0    47   143    39   133    28   139 0.85 Nodulation protein S (NodS)
VanY                 PF02557.12   132 sp|O34866|YODJ_BACSU -            273     5e-43  146.1   1.1   2   2     1e-46     5e-43  146.1   1.1     2   132   121   250   120   250 0.97 D-alanyl-D-alanine carboxypeptidase
DUF3530              PF12048.3    310 sp|O34866|YODJ_BACSU -            273      0.03   13.2   0.6   1   1   9.2e-06     0.045   12.7   0.6    18    80    24    92     8    95 0.71 Protein of unknown function (DUF3530)
Peptidase_M15_4      PF13539.1     67 sp|O34866|YODJ_BACSU -            273     0.051   14.0   0.0   1   1   3.1e-05      0.15   12.4   0.0     6    28   182   203   177   265 0.78 D-alanyl-D-alanine carboxypeptidase
PAP2                 PF01569.16   129 sp|O34349|YODM_BACSU -            203   6.6e-27   93.7   0.9   2   2   2.7e-30   6.6e-27   93.7   0.9     3   127    79   197    77   199 0.93 PAP2 superfamily
DUF3185              PF11381.3     59 sp|O34349|YODM_BACSU -            203      0.02   14.6   0.2   1   1   8.2e-06      0.02   14.6   0.2    39    58   146   165   144   166 0.88 Protein of unknown function (DUF3185)
PAP2_3               PF14378.1    191 sp|O34349|YODM_BACSU -            203     0.024   14.1   6.0   1   1   4.7e-05      0.12   11.9   5.9   108   190    99   188    21   189 0.78 PAP2 superfamily
YhdB                 PF14148.1     77 sp|O34349|YODM_BACSU -            203     0.027   14.2   0.1   1   1   2.2e-05     0.056   13.2   0.1    12    40    70    98    67   104 0.86 YhdB-like protein
PAP2_C               PF14360.1     74 sp|O34349|YODM_BACSU -            203      0.11   12.7   5.0   1   1   2.8e-05     0.069   13.4   2.2     8    71   119   189   117   192 0.82 PAP2 superfamily C-terminal
Acetyltransf_1       PF00583.19    83 sp|O34895|YODP_BACSU -            275   7.3e-07   29.1   0.0   2   2   1.4e-09   3.6e-06   26.9   0.0     3    55   174   222   172   236 0.91 Acetyltransferase (GNAT) family
Acetyltransf_9       PF13527.1    127 sp|O34895|YODP_BACSU -            275   1.9e-05   24.4   0.0   1   1   4.5e-08   0.00011   22.0   0.0     2   113   127   233   126   252 0.82 Acetyltransferase (GNAT) domain
Acetyltransf_7       PF13508.1     79 sp|O34895|YODP_BACSU -            275     2e-05   24.6   0.0   1   1   5.8e-08   0.00014   21.9   0.0     5    61   169   227   165   242 0.79 Acetyltransferase (GNAT) domain
Acetyltransf_10      PF13673.1    117 sp|O34895|YODP_BACSU -            275   0.00064   19.8   0.0   1   1   6.1e-07    0.0015   18.6   0.0     1    97   134   226   131   249 0.69 Acetyltransferase (GNAT) domain
RhoGAP               PF00620.22   152 sp|O34895|YODP_BACSU -            275     0.042   13.4   0.0   1   1   2.9e-05     0.071   12.7   0.0    46    83   118   165    91   186 0.78 RhoGAP domain
Peptidase_M20        PF01546.23   189 sp|O34984|YODQ_BACSU -            436     2e-37  128.5   0.0   1   1   5.4e-41   2.7e-37  128.1   0.0     1   188    99   417    99   418 0.95 Peptidase family M20/M25/M40
M20_dimer            PF07687.9    112 sp|O34984|YODQ_BACSU -            436   3.4e-18   65.4   0.0   1   1   1.3e-21   6.3e-18   64.5   0.0     2   110   203   315   202   317 0.95 Peptidase dimerisation domain
DUF3762              PF12591.3     80 sp|O34984|YODQ_BACSU -            436     0.027   14.5   0.0   1   1   1.2e-05     0.059   13.3   0.0     5    32   260   290   258   302 0.78 Protein of unknown function (DUF3762)
CoA_trans            PF01144.18   217 sp|O34466|YODR_BACSU -            217   2.9e-37  127.9   0.3   1   1   4.4e-41   3.2e-37  127.8   0.3     2   215     9   203     8   205 0.97 Coenzyme A transferase
DeoRC                PF00455.17   162 sp|O34466|YODR_BACSU -            217    0.0031   17.1   0.2   1   2   4.3e-05      0.32   10.6   0.1     5    29     6    30     3    34 0.92 DeoR C terminal sensor domain
CoA_trans            PF01144.18   217 sp|O34317|YODS_BACSU -            229   1.3e-68  230.4   2.0   1   1     1e-72   1.5e-68  230.2   2.0     3   216     9   218     7   219 0.99 Coenzyme A transferase
Aminotran_3          PF00202.16   339 sp|O34662|YODT_BACSU -            444   1.4e-90  303.5   0.0   1   1   3.3e-94   1.6e-90  303.3   0.0     2   338    17   365    16   366 0.97 Aminotransferase class-III
ZapA                 PF05164.8     89 sp|O34662|YODT_BACSU -            444     0.033   14.1   0.0   1   1   3.7e-05      0.18   11.7   0.0    10    40   168   197   166   201 0.93 Cell division protein ZapA
NIPSNAP              PF07978.8    102 sp|O34662|YODT_BACSU -            444      0.11   12.4   0.0   1   1   8.2e-05      0.41   10.6   0.0     5    42   168   205   167   215 0.92 NIPSNAP
MatE                 PF01554.13   162 sp|O34474|YOEA_BACSU -            463   1.7e-76  255.3  40.3   1   2   4.5e-43   2.2e-39  134.6  14.1     1   161    28   188    28   189 0.99 MatE
MatE                 PF01554.13   162 sp|O34474|YOEA_BACSU -            463   1.7e-76  255.3  40.3   2   2   1.5e-40   7.6e-37  126.4  18.1     1   162   257   418   257   418 0.99 MatE
Polysacc_synt_C      PF14667.1    146 sp|O34474|YOEA_BACSU -            463   1.9e-12   47.1  12.8   2   3   3.9e-16   1.9e-12   47.1  12.8     3    94   144   240   142   299 0.82 Polysaccharide biosynthesis C-terminal domain
Polysacc_synt_3      PF13440.1    251 sp|O34474|YOEA_BACSU -            463   0.00016   21.2  27.1   1   3   7.7e-06     0.038   13.4   1.6   188   233    25    70    13    78 0.85 Polysaccharide biosynthesis protein
Polysacc_synt_3      PF13440.1    251 sp|O34474|YOEA_BACSU -            463   0.00016   21.2  27.1   2   3   3.2e-08   0.00016   21.2  27.1     9   248    45   311    37   314 0.75 Polysaccharide biosynthesis protein
Phage_integrase      PF00589.17   173 sp|O35009|YOEC_BACSU -            181   2.9e-28   98.6   0.5   1   1   4.6e-32   3.4e-28   98.4   0.5     8   169    13   166     9   170 0.93 Phage integrase family
ADH_zinc_N           PF00107.21   130 sp|O35017|YOGA_BACSU -            329   1.1e-27   96.1   0.0   1   1   4.1e-31   1.5e-27   95.6   0.0     1   128   169   290   169   292 0.96 Zinc-binding dehydrogenase
ADH_zinc_N_2         PF13602.1    127 sp|O35017|YOGA_BACSU -            329   4.3e-21   76.1   0.0   1   1   3.7e-24   1.4e-20   74.4   0.0     1   125   201   324   201   325 0.76 Zinc-binding dehydrogenase
ADH_N                PF08240.7    109 sp|O35017|YOGA_BACSU -            329   1.4e-13   50.5   0.0   1   1   1.3e-16   4.9e-13   48.7   0.0     2   108    28   125    27   126 0.93 Alcohol dehydrogenase GroES-like domain
ACP_syn_III_C        PF08541.5     90 sp|O35017|YOGA_BACSU -            329      0.14   12.1   0.0   1   1   0.00016      0.58   10.2   0.1    54    85   143   174   137   178 0.84 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal
GntP_permease        PF02447.11   441 sp|O31862|YOJA_BACSU -            444    3e-184  612.6  41.6   1   1  4.5e-188  3.3e-184  612.4  41.6     1   441     1   443     1   443 0.99 GntP family permease
CitMHS               PF03600.11   351 sp|O31862|YOJA_BACSU -            444   6.6e-13   47.9  31.4   1   1   1.4e-16     1e-12   47.3  31.4     6   350    10   392     5   393 0.82 Citrate transporter
EamA                 PF00892.15   126 sp|O31859|YOJE_BACSU -            298   7.8e-20   71.1  38.7   1   2   3.4e-15     1e-11   44.9  15.5     2   124    19   146    17   148 0.87 EamA-like transporter family
EamA                 PF00892.15   126 sp|O31859|YOJE_BACSU -            298   7.8e-20   71.1  38.7   2   2   2.9e-11   8.5e-08   32.2  15.1     2   125   163   285   152   286 0.82 EamA-like transporter family
EmrE                 PF13536.1    113 sp|O31859|YOJE_BACSU -            298   3.4e-12   46.5  28.9   1   2   3.7e-13   1.1e-09   38.4  10.8     4   106    42   148    39   154 0.84 Multidrug resistance efflux transporter
EmrE                 PF13536.1    113 sp|O31859|YOJE_BACSU -            298   3.4e-12   46.5  28.9   2   2   9.9e-06     0.029   14.5   9.1     3   108   184   288   182   292 0.77 Multidrug resistance efflux transporter
TPT                  PF03151.11   153 sp|O31859|YOJE_BACSU -            298    0.0019   17.8   9.0   1   2   6.3e-07    0.0019   17.8   9.0    34   149    34   144     9   145 0.91 Triose-phosphate Transporter family
RseC_MucC            PF04246.7    135 sp|O31859|YOJE_BACSU -            298       1.5    8.4  19.4   2   5   0.00011      0.34   10.4   1.8    63   111    98   147    92   152 0.84 Positive regulator of sigma(E), RseC/MucC
RseC_MucC            PF04246.7    135 sp|O31859|YOJE_BACSU -            298       1.5    8.4  19.4   5   5   0.00016      0.47   10.0   0.6    69   113   242   286   234   298 0.68 Positive regulator of sigma(E), RseC/MucC
VIT1                 PF01988.14   213 sp|O31859|YOJE_BACSU -            298       5.8    6.3  19.8   1   3   0.00024      0.71    9.3   0.2   134   177     9    57     2    60 0.83 VIT family
PIG-L                PF02585.12   128 sp|O31857|YOJG_BACSU -            221   5.8e-25   88.2   0.1   1   2   8.8e-29   1.3e-24   87.1   0.0     1   128     6   136     6   136 0.94 GlcNAc-PI de-N-acetylase
UDPGT                PF00201.13   500 sp|O31853|YOJK_BACSU -            405   5.4e-18   64.8   0.0   2   2   2.9e-19   1.1e-15   57.2   0.0   320   416   278   372   226   379 0.79 UDP-glucoronosyl and UDP-glucosyl transferase
Glyco_tran_28_C      PF04101.11   167 sp|O31853|YOJK_BACSU -            405   3.6e-14   52.7   0.0   1   1   1.7e-17   6.2e-14   52.0   0.0    14   154   249   374   233   392 0.81 Glycosyltransferase family 28 C-terminal domain
Glyco_trans_1_3      PF13528.1    318 sp|O31853|YOJK_BACSU -            405   3.1e-12   46.3   0.0   1   2   6.1e-05      0.22   10.6   0.0    11   127    11   134     5   184 0.70 Glycosyl transferase family 1
Glyco_trans_1_3      PF13528.1    318 sp|O31853|YOJK_BACSU -            405   3.1e-12   46.3   0.0   2   2   6.3e-12   2.3e-08   33.5   0.0   245   317   292   362   245   363 0.87 Glycosyl transferase family 1
Glyco_transf_28      PF03033.15   139 sp|O31853|YOJK_BACSU -            405   0.00033   20.4   0.0   1   2   2.8e-06      0.01   15.5   0.0     1    53     4    56     4   125 0.82 Glycosyltransferase family 28 N-terminal domain
Sod_Cu               PF00080.15   142 sp|O31851|YOJM_BACSU -            196   1.9e-36  125.3   0.2   1   1   3.2e-40   2.3e-36  125.0   0.2     4   141    46   188    42   189 0.95 Copper/zinc superoxide dismutase (SODC)
LPAM_2               PF13627.1     24 sp|O31851|YOJM_BACSU -            196     9e-05   22.0   0.7   1   1   2.1e-08   0.00016   21.2   0.7     2    18     5    21     4    27 0.84 Prokaryotic lipoprotein-attachment site
AAA_5                PF07728.9    139 sp|O31850|YOJN_BACSU -            304   1.9e-28   98.9   0.0   1   1     7e-31   3.3e-28   98.1   0.0     1   139    67   204    67   204 0.97 AAA domain (dynein-related subfamily)
AAA_3                PF07726.6    131 sp|O31850|YOJN_BACSU -            304   4.6e-11   42.4   0.0   1   1   1.5e-13   7.4e-11   41.7   0.0     2   131    68   206    67   206 0.87 ATPase family associated with various cellular activities (AAA)
AAA_6                PF12774.2    231 sp|O31850|YOJN_BACSU -            304   7.2e-06   25.6   0.1   1   1   2.3e-07   0.00011   21.8   0.1    38   196    71   240    54   247 0.69 Hydrolytic ATP binding site of dynein motor region D1
AAA_14               PF13173.1    128 sp|O31850|YOJN_BACSU -            304   1.8e-05   24.6   0.0   1   1     7e-08   3.4e-05   23.7   0.0     3    96    66   171    64   190 0.66 AAA domain
Sigma54_activat      PF00158.21   168 sp|O31850|YOJN_BACSU -            304   5.4e-05   22.7   0.0   1   1     3e-07   0.00014   21.3   0.0    20   143    63   188    48   213 0.71 Sigma-54 interaction domain
Mg_chelatase         PF01078.16   207 sp|O31850|YOJN_BACSU -            304   8.5e-05   21.8   0.2   1   1     3e-06    0.0014   17.8   0.2    16    46    59    89    46   203 0.91 Magnesium chelatase, subunit ChlI
T2SE                 PF00437.15   272 sp|O31850|YOJN_BACSU -            304   0.00021   20.3   0.0   1   1   9.3e-07   0.00045   19.2   0.0    98   155    32    92     3   105 0.64 Type II/IV secretion system protein
AAA                  PF00004.24   132 sp|O31850|YOJN_BACSU -            304   0.00023   21.3   0.0   1   1   9.8e-07   0.00047   20.3   0.0     1    72    68   149    68   210 0.69 ATPase family associated with various cellular activities (AAA)
CbbQ_C               PF08406.5     86 sp|O31850|YOJN_BACSU -            304    0.0024   17.8   0.2   1   1   8.2e-06    0.0039   17.1   0.2    13    84   230   301   218   303 0.73 CbbQ/NirQ/NorQ C-terminal
DEAD                 PF00270.24   169 sp|O31850|YOJN_BACSU -            304    0.0027   17.2   0.0   1   1   8.3e-06    0.0039   16.6   0.0     8    32    60    83    53   277 0.78 DEAD/DEAH box helicase
AAA_2                PF07724.9    171 sp|O31850|YOJN_BACSU -            304    0.0028   17.5   0.0   1   1   1.5e-05    0.0071   16.2   0.0     5    82    67   149    64   160 0.69 AAA domain (Cdc48 subfamily)
AAA_17               PF13207.1    121 sp|O31850|YOJN_BACSU -            304    0.0046   17.7   0.0   1   1   1.4e-05    0.0067   17.2   0.0     2    42    68   113    67   292 0.84 AAA domain
TIP49                PF06068.8    398 sp|O31850|YOJN_BACSU -            304    0.0058   15.3   0.0   1   2     6e-05     0.029   13.0   0.0    41    76    57    91    23   101 0.76 TIP49 C-terminus
IstB_IS21            PF01695.12   178 sp|O31850|YOJN_BACSU -            304    0.0084   15.5   0.0   1   1   3.2e-05     0.015   14.6   0.0    47    69    65    87    58   123 0.88 IstB-like ATP binding protein
AAA_19               PF13245.1     76 sp|O31850|YOJN_BACSU -            304    0.0086   15.8   0.0   1   1   4.9e-05     0.024   14.4   0.0     1    27    57    82    57   105 0.80 Part of AAA domain
AAA_22               PF13401.1    131 sp|O31850|YOJN_BACSU -            304    0.0087   16.1   0.0   1   1     5e-05     0.024   14.7   0.0     7    99    68   147    64   190 0.69 AAA domain
AAA_16               PF13191.1    185 sp|O31850|YOJN_BACSU -            304     0.009   16.0   0.0   1   1     4e-05     0.019   14.9   0.0    24    59    65    99    52   130 0.76 AAA ATPase domain
AAA_33               PF13671.1    143 sp|O31850|YOJN_BACSU -            304      0.02   14.7   0.0   1   1   8.6e-05     0.041   13.7   0.0     2    80    68   146    68   161 0.78 AAA domain
ABC_tran             PF00005.22   137 sp|O31850|YOJN_BACSU -            304     0.025   14.8   0.0   1   1   0.00011     0.051   13.8   0.0     8    42    62    96    56   137 0.81 ABC transporter
AAA_18               PF13238.1    129 sp|O31850|YOJN_BACSU -            304     0.027   14.7   0.0   1   1   0.00016     0.079   13.2   0.0     1    26    68    98    68   171 0.74 AAA domain
Sigma54_activ_2      PF14532.1    138 sp|O31850|YOJN_BACSU -            304     0.031   14.3   0.2   1   1   0.00035      0.17   11.9   0.0    22    48    66    92    55   165 0.71 Sigma-54 interaction domain
AAA_29               PF13555.1     62 sp|O31850|YOJN_BACSU -            304     0.034   13.6   0.0   1   1   0.00018     0.087   12.3   0.0    22    39    64    81    55    96 0.82 P-loop containing region of AAA domain
UPF0079              PF02367.12   123 sp|O31850|YOJN_BACSU -            304      0.04   13.5   0.0   1   1   0.00017      0.08   12.5   0.0    12    39    62    89    57    98 0.85 Uncharacterised P-loop hydrolase UPF0079
ResIII               PF04851.10   184 sp|O31850|YOJN_BACSU -            304     0.059   13.2   0.0   1   1   0.00018     0.088   12.6   0.0    25    51    65    91    23   130 0.83 Type III restriction enzyme, res subunit
Zeta_toxin           PF06414.7    201 sp|O31850|YOJN_BACSU -            304     0.062   12.3   0.0   1   1   0.00023      0.11   11.5   0.0    18    43    67    91    57   125 0.85 Zeta toxin
CobU                 PF02283.11   167 sp|O31850|YOJN_BACSU -            304     0.065   12.6   0.1   1   2    0.0017      0.83    9.0   0.0     1    38    68   105    68   108 0.89 Cobinamide kinase / cobinamide phosphate guanyltransferase
RuvB_N               PF05496.7    234 sp|O31850|YOJN_BACSU -            304     0.079   11.9   0.0   1   2    0.0016      0.78    8.7   0.0    52    80    67    95    30   118 0.85 Holliday junction DNA helicase ruvB N-terminus
RNA_helicase         PF00910.17   107 sp|O31850|YOJN_BACSU -            304     0.085   13.0   0.0   1   1    0.0008      0.38   10.9   0.0     1    26    68    93    68   125 0.82 RNA helicase
ATP-synt_ab          PF00006.20   215 sp|O31850|YOJN_BACSU -            304     0.098   12.1   0.0   1   1   0.00022       0.1   12.0   0.0     6    42    56    92    52   266 0.90 ATP synthase alpha/beta family, nucleotide-binding domain
CPT                  PF07931.7    174 sp|O31850|YOJN_BACSU -            304      0.14   11.8   0.0   1   1   0.00049      0.23   11.0   0.0     2    43    66   109    65   142 0.75 Chloramphenicol phosphotransferase-like protein
Recombinase          PF07508.8    102 sp|O32006|YOKA_BACSU -            545   9.5e-23   80.3   9.7   1   2   3.4e-25   1.3e-21   76.7   1.7     1   101   189   298   189   299 0.91 Recombinase
Resolvase            PF00239.16   141 sp|O32006|YOKA_BACSU -            545   3.6e-14   52.8   0.3   1   2   9.8e-18   3.6e-14   52.8   0.3     2   141    16   167    15   167 0.91 Resolvase, N terminal domain
Zn_ribbon_recom      PF13408.1     58 sp|O32006|YOKA_BACSU -            545   4.2e-05   23.7   4.8   1   1   3.2e-08   0.00012   22.2   4.8     2    57   314   374   313   375 0.70 Recombinase zinc beta ribbon domain
DUF2252              PF10009.4    385 sp|O32006|YOKA_BACSU -            545      0.11   11.4   3.2   1   1   4.7e-05      0.17   10.7   3.2    98   220   378   511   371   514 0.86 Uncharacterized protein conserved in bacteria (DUF2252)
Antibiotic_NAT       PF02522.9    229 sp|O32003|YOKD_BACSU -            272     9e-88  293.3   0.0   1   1     7e-92     1e-87  293.1   0.0     1   227    33   263    33   265 0.99 Aminoglycoside 3-N-acetyltransferase
MutS_III             PF05192.13   204 sp|O32000|YOKG_BACSU -            357    0.0007   19.4   0.0   1   1   1.8e-06    0.0038   17.0   0.0    53   191   128   345    49   350 0.68 MutS domain III
Ded_cyto             PF06920.8    178 sp|O32000|YOKG_BACSU -            357    0.0067   15.7   1.9   1   1   4.8e-06      0.01   15.1   1.2    66   151   132   221   130   231 0.89 Dedicator of cytokinesis
DUF1767              PF08585.7     90 sp|O32000|YOKG_BACSU -            357      0.02   15.1   0.1   1   1   3.4e-05     0.073   13.3   0.1     8    54    77   125    72   138 0.84 Domain of unknown function (DUF1767)
NYD-SP12_N           PF15015.1    569 sp|O32000|YOKG_BACSU -            357     0.052   11.7   0.0   1   1   3.8e-05      0.08   11.1   0.0   343   397   275   330   266   338 0.84 Spermatogenesis-associated, N-terminal
Acetyltransf_3       PF13302.1    142 sp|O31995|YOKL_BACSU -            177   2.4e-17   63.4   0.0   1   1   1.5e-20   2.9e-17   63.1   0.0     2   141    11   143    10   144 0.84 Acetyltransferase (GNAT) domain
Acetyltransf_4       PF13420.1    155 sp|O31995|YOKL_BACSU -            177   2.2e-16   60.1   0.2   1   1   1.3e-19   2.5e-16   60.0   0.2     2   153    14   162    13   164 0.84 Acetyltransferase (GNAT) domain
Acetyltransf_8       PF13523.1    152 sp|O31995|YOKL_BACSU -            177   4.4e-11   42.8   0.1   1   1   3.5e-14   6.5e-11   42.3   0.1    33   142    46   149    38   156 0.89 Acetyltransferase (GNAT) domain
Acetyltransf_1       PF00583.19    83 sp|O31995|YOKL_BACSU -            177   4.9e-11   42.5   0.0   1   1   3.9e-14   7.3e-11   41.9   0.0     2    82    66   143    65   144 0.97 Acetyltransferase (GNAT) family
Acetyltransf_7       PF13508.1     79 sp|O31995|YOKL_BACSU -            177   2.8e-08   33.7   0.3   1   1   2.4e-11   4.4e-08   33.1   0.3     4    77    61   143    58   145 0.80 Acetyltransferase (GNAT) domain
FR47                 PF08445.5     86 sp|O31995|YOKL_BACSU -            177   0.00092   18.9   0.0   1   1   9.9e-07    0.0018   17.9   0.0    18    80    82   146    77   152 0.83 FR47-like protein
Acetyltransf_9       PF13527.1    127 sp|O31995|YOKL_BACSU -            177     0.021   14.6   0.0   1   1   2.3e-05     0.043   13.6   0.0     2    98    13   111    12   144 0.85 Acetyltransferase (GNAT) domain
Acetyltransf_10      PF13673.1    117 sp|O31995|YOKL_BACSU -            177      0.04   14.0   0.0   1   1   2.8e-05     0.052   13.6   0.0    25   117    47   143    29   143 0.70 Acetyltransferase (GNAT) domain
Tautomerase_2        PF14552.1     82 sp|O34882|YOLI_BACSU -            129   2.4e-30  104.3   0.0   1   1   8.7e-34   4.3e-30  103.5   0.0     1    82    38   118    38   118 0.99 Tautomerase enzyme
Tautomerase          PF01361.16    60 sp|O34882|YOLI_BACSU -            129   1.7e-15   56.3   0.0   1   2   2.4e-14   1.2e-10   40.8   0.0     1    58     2    59     2    61 0.96 Tautomerase enzyme
Tautomerase          PF01361.16    60 sp|O34882|YOLI_BACSU -            129   1.7e-15   56.3   0.0   2   2   6.2e-06     0.031   13.8   0.0     2    53    66   118    66   120 0.92 Tautomerase enzyme
CAT_RBD              PF03123.10    59 sp|O34882|YOLI_BACSU -            129      0.02   14.5   0.0   1   1     9e-06     0.044   13.4   0.0    13    40    42    69    41    95 0.81 CAT RNA binding domain
SLT                  PF01464.15   121 sp|O31976|YOMI_BACSU -           2285   1.2e-31  108.6   1.1   2   2   5.8e-35   1.2e-31  108.6   1.1     2   118  1425  1531  1424  1534 0.93 Transglycosylase SLT domain
PhageMin_Tail        PF10145.4    202 sp|O31976|YOMI_BACSU -           2285   5.6e-29  101.2  11.3   3   8   2.6e-32   5.6e-29  101.2  11.3     3   196   389   581   387   587 0.96 Phage-related minor tail protein
Peptidase_M23        PF01551.17    96 sp|O31976|YOMI_BACSU -           2285   1.8e-28   98.4   2.7   1   1   4.5e-31   9.4e-28   96.1   2.7     2    96  1579  1674  1578  1674 0.96 Peptidase family M23
Uds1                 PF15456.1    124 sp|O31976|YOMI_BACSU -           2285    0.0051   16.8   4.7   1   8   2.4e-06    0.0051   16.8   4.7    20    98    16    94    15    98 0.95 Up-regulated During Septation
Uds1                 PF15456.1    124 sp|O31976|YOMI_BACSU -           2285    0.0051   16.8   4.7   2   8    0.0002      0.43   10.5   7.5    26   103    99   200    94   208 0.92 Up-regulated During Septation
Transglycosylas      PF06737.9     77 sp|O31976|YOMI_BACSU -           2285     0.014   15.6   0.1   2   2   6.6e-06     0.014   15.6   0.1     8    55  1441  1487  1435  1504 0.79 Transglycosylase-like domain
Phage_integrase      PF00589.17   173 sp|O31971|YOMM_BACSU -            333   4.4e-09   36.2   0.1   2   2   4.1e-12   1.2e-08   34.7   0.0     4   168   148   321   145   326 0.84 Phage integrase family
Phage_int_SAM_4      PF13495.1     85 sp|O31971|YOMM_BACSU -            333     2e-05   24.8   0.4   1   2   6.7e-09     2e-05   24.8   0.4     5    78    36   112    33   119 0.87 Phage integrase, N-terminal SAM-like domain
DUF3826              PF12875.2    188 sp|O31971|YOMM_BACSU -            333    0.0097   15.6   0.1   1   1   9.7e-06     0.029   14.0   0.1   103   140   137   174   132   177 0.91 Protein of unknown function (DUF3826)
Phage_int_SAM_1      PF02899.12    84 sp|O31971|YOMM_BACSU -            333     0.022   14.8   0.7   1   1   1.9e-05     0.057   13.5   0.2    13    69    44   101    36   114 0.86 Phage integrase, N-terminal SAM-like domain
Borrelia_lipo_1      PF05714.6    211 sp|O31971|YOMM_BACSU -            333      0.03   13.4   0.1   1   1   1.9e-05     0.057   12.5   0.1   120   207   105   193    36   196 0.84 Borrelia burgdorferi virulent strain associated lipoprotein
Phage_integrase      PF00589.17   173 sp|O34336|YOPP_BACSU -            358   6.8e-12   45.3   0.3   1   1   3.4e-15   1.3e-11   44.5   0.3     4   167   143   305   141   308 0.84 Phage integrase family
Phage_int_SAM_4      PF13495.1     85 sp|O34336|YOPP_BACSU -            358   7.9e-08   32.5   0.8   1   2   9.2e-11   3.4e-07   30.4   0.1    17    81    46   116    41   119 0.93 Phage integrase, N-terminal SAM-like domain
Phage_int_SAM_1      PF02899.12    84 sp|O34336|YOPP_BACSU -            358   4.6e-07   29.8   0.0   1   1   4.6e-10   1.7e-06   28.0   0.0    15    81    44   114    37   116 0.86 Phage integrase, N-terminal SAM-like domain
CAAP1                PF15335.1     64 sp|O34336|YOPP_BACSU -            358      0.04   14.1   0.0   1   1   3.4e-05      0.13   12.5   0.0    16    36    55    75    50    91 0.88 Caspase activity and apoptosis inhibitor 1
DUF159               PF02586.9    208 sp|O31916|YOQW_BACSU -            224   9.4e-64  214.7   0.0   1   1   2.1e-67   1.1e-63  214.6   0.0     1   208     1   218     1   218 0.94 Uncharacterised ACR, COG2135
Cyclase_polyket      PF04673.7     97 sp|O31916|YOQW_BACSU -            224     0.055   13.5   0.1   1   1   3.8e-05      0.19   11.8   0.1    17    86   111   183   101   191 0.87 Polyketide synthesis cyclase
Pro-kuma_activ       PF09286.6    143 sp|O31916|YOQW_BACSU -            224      0.12   12.4   0.0   1   1   3.3e-05      0.16   11.9   0.0     7    40   108   141   104   200 0.91 Pro-kumamolisin, activation domain
DUF867               PF05908.6    194 sp|O31913|YOQZ_BACSU -            274   1.5e-71  239.5   0.2   1   1   1.2e-75   1.8e-71  239.2   0.2     1   193    69   257    69   258 0.99 Protein of unknown function (DUF867)
DHH                  PF01368.15   145 sp|O31903|YORK_BACSU -            576   2.8e-15   56.2   4.1   1   2     6e-19   4.5e-15   55.5   2.1     3   143    60   205    58   207 0.84 DHH family
Toprim               PF01751.17   100 sp|O31903|YORK_BACSU -            576     0.018   15.0   0.1   1   1     1e-05     0.077   12.9   0.1    48    95    50    99    18   100 0.83 Toprim domain
DNA_pol3_alpha       PF07733.7    426 sp|O31902|YORL_BACSU -           1305  2.2e-112  375.6   1.4   1   1  8.5e-116  3.1e-112  375.1   1.4     2   425   352   823   351   824 0.94 Bacterial DNA polymerase III alpha subunit
PHP                  PF02811.14   175 sp|O31902|YORL_BACSU -           1305   1.6e-28   99.6   0.4   1   3   4.2e-32   1.6e-28   99.6   0.4     3   174     4   219     2   224 0.92 PHP domain
HHH_6                PF14579.1     90 sp|O31902|YORL_BACSU -           1305   1.3e-16   60.4   0.0   1   1   7.9e-20   2.9e-16   59.2   0.0     1    88   915  1000   915  1003 0.95 Helix-hairpin-helix motif
Laminin_I            PF06008.9    264 sp|O31902|YORL_BACSU -           1305     0.058   12.6   0.7   1   2   5.2e-05      0.19   10.9   0.2   124   182   341   399   329   403 0.85 Laminin Domain I
Tiny_TM_bacill       PF09680.5     24 sp|O31888|YOSA_BACSU -             39   2.5e-12   45.9  10.9   2   2   1.7e-16   2.5e-12   45.9  10.9     1    23    15    37    15    38 0.96 Protein of unknown function (Tiny_TM_bacill)
Ribonuc_red_sm       PF00268.16   281 sp|O30601|YOSP_BACSU -            329   3.3e-48  164.1   3.8   1   1   2.9e-52   4.3e-48  163.7   3.8    10   275     9   281     2   286 0.88 Ribonucleotide reductase, small chain
Thioredoxin          PF00085.15   104 sp|O34342|YOSR_BACSU -             80   6.5e-08   32.1   0.0   1   1     6e-11   8.9e-08   31.7   0.0    22   102     3    77     1    79 0.81 Thioredoxin
Glutaredoxin         PF00462.19    60 sp|O34342|YOSR_BACSU -             80   2.9e-07   30.3   0.0   1   1     3e-10   4.4e-07   29.7   0.0     7    52     9    50     2    55 0.88 Glutaredoxin
Thioredoxin_2        PF13098.1    112 sp|O34342|YOSR_BACSU -             80   6.3e-06   26.3   0.4   2   2     1e-06    0.0016   18.6   0.0    69   106    34    71    26    79 0.84 Thioredoxin-like domain
Thioredoxin_3        PF13192.1     76 sp|O34342|YOSR_BACSU -             80   1.2e-05   24.9   0.0   1   1     1e-08   1.5e-05   24.6   0.0     3    55     4    53     2    77 0.75 Thioredoxin domain
DUF836               PF05768.9     81 sp|O34342|YOSR_BACSU -             80   0.00096   19.3   0.0   1   1   6.5e-07   0.00096   19.3   0.0     5    53     6    51     2    80 0.77 Glutaredoxin-like domain (DUF836)
ArsC                 PF03960.10   110 sp|O34342|YOSR_BACSU -             80    0.0032   17.5   0.0   1   1   3.3e-06    0.0049   16.9   0.0     3    32     8    37     6    77 0.87 ArsC family
KaiB                 PF07689.7     82 sp|O34342|YOSR_BACSU -             80     0.045   13.2   0.0   1   1   3.8e-05     0.057   12.8   0.0    25    54    21    50     6    57 0.84 KaiB domain
Thioredoxin_8        PF13905.1     95 sp|O34342|YOSR_BACSU -             80     0.059   13.4   0.0   2   2   0.00043      0.64   10.1   0.0    67    94    32    59    15    60 0.69 Thioredoxin-like
DUF3898              PF13037.1     91 sp|O34342|YOSR_BACSU -             80     0.087   12.7   0.1   1   2   0.00043      0.64    9.9   0.0    19    47    33    61    16    65 0.84 Domain of unknown function (DUF3898)
TrbC_Ftype           PF09673.5    113 sp|O34342|YOSR_BACSU -             80      0.11   12.1   0.0   1   1   7.8e-05      0.12   12.0   0.0    46    88    23    64     7    79 0.70 Type-F conjugative transfer system pilin assembly protein
dUTPase              PF00692.14   129 sp|O34919|YOSS_BACSU -            142   3.8e-14   52.2   0.0   1   1   8.7e-18   4.3e-14   52.0   0.0    16   124    24   137    11   142 0.82 dUTPase
PapG_N               PF03627.8    226 sp|O34919|YOSS_BACSU -            142     0.046   13.1   0.0   1   1   1.3e-05     0.064   12.6   0.0    85   140    58   111    47   124 0.87 PapG carbohydrate binding domain
DUF1322              PF07032.6     78 sp|O34919|YOSS_BACSU -            142     0.058   13.5   0.1   1   1     4e-05       0.2   11.8   0.1    41    64   107   130    65   132 0.85 Protein of unknown function (DUF1322)
adh_short            PF00106.20   167 sp|P14802|YOXD_BACSU -            238   9.4e-42  142.7   4.3   1   1   7.8e-45   1.3e-41  142.3   4.3     1   166     7   173     7   174 0.98 short chain dehydrogenase
KR                   PF08659.5    181 sp|P14802|YOXD_BACSU -            238   6.1e-19   68.3   2.7   1   1   5.3e-22   8.7e-19   67.8   2.7     2   154     8   160     8   191 0.89 KR domain
adh_short_C2         PF13561.1    241 sp|P14802|YOXD_BACSU -            238   9.4e-17   61.5   0.8   1   1     7e-20   1.1e-16   61.2   0.8     6   184    16   191    13   218 0.92 Enoyl-(Acyl carrier protein) reductase
Epimerase            PF01370.16   236 sp|P14802|YOXD_BACSU -            238   2.8e-07   30.1   0.6   1   1   6.6e-10   1.1e-06   28.2   0.6     1   171     9   189     9   207 0.79 NAD dependent epimerase/dehydratase family
Shikimate_DH         PF01488.15   135 sp|P14802|YOXD_BACSU -            238   4.9e-05   23.4   3.0   1   2   5.1e-08   8.4e-05   22.6   1.8     8    73     2    71     1   137 0.83 Shikimate / quinate 5-dehydrogenase
3Beta_HSD            PF01073.14   280 sp|P14802|YOXD_BACSU -            238    0.0015   17.3   0.6   1   1   1.5e-06    0.0025   16.5   0.6     1   104    10   126    10   144 0.79 3-beta hydroxysteroid dehydrogenase/isomerase family
DUF1776              PF08643.5    299 sp|P14802|YOXD_BACSU -            238     0.034   13.2   0.0   1   1   3.1e-05     0.052   12.6   0.0   107   195    97   182    86   184 0.79 Fungal family of unknown function (DUF1776)
NAD_binding_10       PF13460.1    183 sp|P14802|YOXD_BACSU -            238      0.19   11.7   4.2   1   1   0.00028      0.47   10.4   4.2     2    73    10    79    10   221 0.71 NADH(P)-binding
Eno-Rase_NADH_b      PF12242.3     78 sp|P14802|YOXD_BACSU -            238      0.21   11.3   3.1   1   1   0.00015      0.26   11.1   1.6    40    62     7    30     2    41 0.83 NAD(P)H binding domain of trans-2-enoyl-CoA reductase
Tiny_TM_bacill       PF09680.5     24 sp|C0H435|YOYG_BACSU -             37   8.1e-12   44.3   9.2   2   2   5.4e-16   8.1e-12   44.3   9.2     2    24    14    36    13    36 0.94 Protein of unknown function (Tiny_TM_bacill)
DUF1250              PF06855.7     46 sp|O31864|YOZE_BACSU -             74   3.7e-23   80.7   4.5   1   1   3.9e-27   5.8e-23   80.1   4.5     1    46    23    68    23    68 0.99 Protein of unknown function (DUF1250)
IMS                  PF00817.15   149 sp|O31841|YOZK_BACSU -            115   2.6e-15   56.4   0.0   1   1     2e-19     3e-15   56.3   0.0     1    98    15   115    15   115 0.87 impB/mucB/samB family
YPEB                 PF14620.1    361 sp|P38490|YPEB_BACSU -            450  9.3e-131  436.1   5.7   1   2  1.9e-134  9.3e-131  436.1   5.7     1   361    13   374    13   374 0.98 YpeB sporulation
PepSY                PF03413.14    64 sp|P38490|YPEB_BACSU -            450     2e-05   25.1   0.8   1   2   7.6e-06     0.038   14.6   0.3     2    50   220   268   219   285 0.81 Peptidase propeptide and YPEB domain
DUF2371              PF10177.4    141 sp|P38490|YPEB_BACSU -            450     0.056   13.3   0.0   1   1   2.6e-05      0.13   12.1   0.0    44    81     2    38     1    72 0.72 Uncharacterised conserved protein (DUF2371)
Disulph_isomer       PF06491.6    136 sp|P54170|YPHP_BACSU -            144   1.1e-67  226.1   0.5   1   1   3.2e-71   1.2e-67  225.9   0.5     1   136     8   144     8   144 0.99 Disulphide isomerase
PilX                 PF13681.1    101 sp|P54170|YPHP_BACSU -            144     0.044   14.2   0.0   1   1   1.5e-05     0.056   13.9   0.0    14    91    44   121    30   126 0.78 Type IV pilus assembly protein PilX C-term
ASRT                 PF07100.6    121 sp|P54170|YPHP_BACSU -            144     0.064   12.9   0.0   1   1   2.6e-05     0.097   12.4   0.0    28    78    76   126    62   139 0.83 Anabaena sensory rhodopsin transducer
LytR_C               PF13399.1     90 sp|P54170|YPHP_BACSU -            144     0.067   13.5   0.2   1   1   2.7e-05     0.099   13.0   0.2    21    87    16    86    10    89 0.71 LytR cell envelope-related transcriptional attenuator
UPF0302              PF08864.5    106 sp|P54390|YPIB_BACSU -            179   1.8e-48  162.7   1.0   1   2   2.4e-52   1.8e-48  162.7   1.0     1   105     9   113     9   114 0.99 UPF0302 domain
IDEAL                PF08858.5     37 sp|P54390|YPIB_BACSU -            179   4.9e-14   51.5   4.9   1   1     2e-17   1.4e-13   50.0   4.9     1    37   139   175   139   175 0.98 IDEAL domain
DUF161               PF02588.10    82 sp|P42978|YPJC_BACSU -            290   6.5e-27   93.6  32.3   1   2   5.9e-15   2.9e-11   43.4  14.0     2    82    10    91     9    91 0.94 Uncharacterized BCR, YitT family COG1284
DUF161               PF02588.10    82 sp|P42978|YPJC_BACSU -            290   6.5e-27   93.6  32.3   2   2   6.3e-19   3.1e-15   56.2  10.3     3    80   109   187   107   189 0.94 Uncharacterized BCR, YitT family COG1284
DUF2179              PF10035.4     55 sp|P42978|YPJC_BACSU -            290   9.7e-24   82.7   0.0   1   1   6.9e-27   3.4e-23   80.9   0.0     1    55   222   276   222   276 0.99 Uncharacterized protein conserved in bacteria (DUF2179)
Ctr                  PF04145.10   144 sp|P42978|YPJC_BACSU -            290      0.21   11.6   0.1   1   2   4.3e-05      0.21   11.6   0.1    11    48    61    98    57   106 0.90 Ctr copper transporter family
PIG-L                PF02585.12   128 sp|P42981|YPJG_BACSU -            236   1.6e-23   83.5   0.0   1   1   1.6e-27   2.4e-23   83.0   0.0     1   128     7   124     7   124 0.95 GlcNAc-PI de-N-acetylase
Glycos_transf_1      PF00534.15   172 sp|P42982|YPJH_BACSU -            377   1.6e-43  148.0   0.1   1   1   1.4e-46   2.4e-43  147.5   0.1     4   171   188   351   185   352 0.97 Glycosyl transferases group 1
Glyco_transf_4       PF13439.1    177 sp|P42982|YPJH_BACSU -            377   4.7e-23   81.8   0.0   1   1   4.9e-26     8e-23   81.0   0.0     3   175     6   180     4   181 0.87 Glycosyltransferase Family 4
Glyco_trans_4_2      PF13477.1    139 sp|P42982|YPJH_BACSU -            377   7.2e-18   64.7   0.1   1   1     9e-21   1.5e-17   63.7   0.1    11   138    19   151    14   152 0.87 Glycosyl transferase 4-like
Glyco_trans_4_4      PF13579.1    160 sp|P42982|YPJH_BACSU -            377   6.1e-15   55.7   0.0   1   1   5.3e-18   8.8e-15   55.1   0.0     1   159    15   174    15   175 0.83 Glycosyl transferase 4-like domain
Glyco_trans_1_4      PF13692.1    135 sp|P42982|YPJH_BACSU -            377   1.6e-14   54.2   0.0   2   2   1.7e-16   2.9e-13   50.1   0.0     4   125   201   328   198   338 0.81 Glycosyl transferases group 1
Glyco_trans_1_2      PF13524.1     92 sp|P42982|YPJH_BACSU -            377   1.8e-08   34.5   0.0   1   1   3.2e-11   5.4e-08   33.0   0.0     3    90   277   366   275   368 0.92 Glycosyl transferases group 1
Glyco_transf_5       PF08323.6    245 sp|P42982|YPJH_BACSU -            377     6e-07   29.2   0.8   1   2   3.1e-05     0.051   13.0   0.0     8    58     9    54     4    77 0.72 Starch synthase catalytic domain
Glyco_transf_5       PF08323.6    245 sp|P42982|YPJH_BACSU -            377     6e-07   29.2   0.8   2   2   4.5e-05     0.075   12.5   0.7   122   230    78   159    72   170 0.79 Starch synthase catalytic domain
Cas_Cas1             PF01867.11   282 sp|P42982|YPJH_BACSU -            377    0.0066   15.5   0.0   1   1   7.6e-06     0.013   14.6   0.0    42   122    16    96    13   124 0.84 CRISPR associated protein Cas1
Pyr_redox            PF00070.22    80 sp|P42982|YPJH_BACSU -            377     0.049   14.0   0.0   1   2   0.00059      0.97    9.8   0.0     6    35    16    45    13    54 0.85 Pyridine nucleotide-disulphide oxidoreductase
MatE                 PF01554.13   162 sp|P54181|YPNP_BACSU -            445   1.1e-66  223.4  34.3   1   2   1.4e-34   6.8e-31  107.0  11.2     1   162    21   182    21   182 0.99 MatE
MatE                 PF01554.13   162 sp|P54181|YPNP_BACSU -            445   1.1e-66  223.4  34.3   2   2   3.4e-39   1.7e-35  122.0  15.1     1   161   241   401   241   402 0.99 MatE
Polysacc_synt_C      PF14667.1    146 sp|P54181|YPNP_BACSU -            445     6e-11   42.3  17.9   2   3   1.2e-14     6e-11   42.3  17.9     1   130   135   283   135   295 0.79 Polysaccharide biosynthesis C-terminal domain
Polysacc_synt        PF01943.12   273 sp|P54181|YPNP_BACSU -            445    0.0064   15.7   3.2   1   3   1.3e-06    0.0064   15.7   3.2   204   270    12    78     3    81 0.91 Polysaccharide biosynthesis protein
DEAD                 PF00270.24   169 sp|P50830|YPRA_BACSU -            749   2.8e-26   92.0   0.0   1   1   2.7e-29   6.7e-26   90.7   0.0     3   168    58   230    56   231 0.87 DEAD/DEAH box helicase
DUF1998              PF09369.5     84 sp|P50830|YPRA_BACSU -            749   1.4e-16   60.8   0.0   1   1   1.7e-19   4.2e-16   59.2   0.0     2    84   649   728   648   728 0.92 Domain of unknown function (DUF1998)
Helicase_C           PF00271.26    78 sp|P50830|YPRA_BACSU -            749   5.3e-12   45.4   0.0   2   2   1.6e-14   4.1e-11   42.5   0.0    14    77   325   388   310   389 0.91 Helicase conserved C-terminal domain
ResIII               PF04851.10   184 sp|P50830|YPRA_BACSU -            749   1.2e-05   25.1   0.1   1   2   3.7e-08   9.3e-05   22.3   0.0    22   158    55   190    29   227 0.74 Type III restriction enzyme, res subunit
DUF4479              PF14794.1     74 sp|P50830|YPRA_BACSU -            749     0.088   12.3   0.0   1   1    0.0003      0.74    9.4   0.0     8    68    64   130    57   134 0.81 Domain of unknown function (DUF4479)
tRNA_int_end_N2      PF12928.2     72 sp|P50830|YPRA_BACSU -            749      0.13   11.7   0.0   1   1   0.00011      0.28   10.6   0.0    24    62   495   533   462   540 0.84 tRNA-splicing endonuclease subunit sen54 N-term
DUF1273              PF06908.6    177 sp|P50838|YPSA_BACSU -            180   2.7e-75  251.9   0.8   1   1   4.1e-79   3.1e-75  251.7   0.8     1   177     1   177     1   177 0.99 Protein of unknown function (DUF1273)
Miro                 PF08477.8    119 sp|P50838|YPSA_BACSU -            180     0.087   13.3   0.0   1   1   1.5e-05      0.11   12.9   0.0    30   114    87   166    64   170 0.69 Miro-like protein
UPF0020              PF01170.13   180 sp|P50840|YPSC_BACSU -            385   2.6e-63  212.8   0.0   1   1   2.9e-66   3.9e-63  212.2   0.0     1   179   164   369   164   370 0.96 Putative RNA methylase family UPF0020
THUMP                PF02926.12   144 sp|P50840|YPSC_BACSU -            385   7.7e-20   71.2   0.6   1   1   1.2e-22   1.6e-19   70.1   0.6    13   143    18   155    12   156 0.96 THUMP domain
Methyltransf_26      PF13659.1    117 sp|P50840|YPSC_BACSU -            385   1.7e-13   50.6   0.0   1   1   3.4e-16   4.5e-13   49.2   0.0     5   101   196   328   192   342 0.90 Methyltransferase domain
MTS                  PF05175.9    170 sp|P50840|YPSC_BACSU -            385   3.2e-06   26.6   0.0   2   2   1.2e-07   0.00016   21.0   0.0    55   124   253   322   246   335 0.84 Methyltransferase small domain
Methyltransf_31      PF13847.1    152 sp|P50840|YPSC_BACSU -            385   9.5e-06   25.2   0.0   2   2     3e-06    0.0041   16.7   0.0    30   112   255   343   237   381 0.73 Methyltransferase domain
Cons_hypoth95        PF03602.10   183 sp|P50840|YPSC_BACSU -            385   1.5e-05   24.4   0.0   1   2   0.00068      0.92    8.8   0.0    41    61   190   210   173   215 0.78 Conserved hypothetical protein 95
Cons_hypoth95        PF03602.10   183 sp|P50840|YPSC_BACSU -            385   1.5e-05   24.4   0.0   2   2   3.2e-05     0.044   13.1   0.0    70   138   258   321   254   357 0.82 Conserved hypothetical protein 95
Methyltransf_18      PF12847.2    112 sp|P50840|YPSC_BACSU -            385    0.0016   18.9   0.8   1   1   1.9e-05     0.026   15.1   0.2    26    69   254   294   195   330 0.80 Methyltransferase domain
PrmA                 PF06325.8    295 sp|P50840|YPSC_BACSU -            385    0.0028   16.8   0.0   2   2   0.00028      0.38    9.8   0.0   186   232   255   304   252   305 0.78 Ribosomal protein L11 methyltransferase (PrmA)
Eco57I               PF07669.6    106 sp|P50840|YPSC_BACSU -            385    0.0041   17.4   0.0   1   1   7.5e-06      0.01   16.1   0.0     2    37   297   326   296   374 0.65 Eco57I restriction-modification methylase
N6_N4_Mtase          PF01555.13   231 sp|P50840|YPSC_BACSU -            385     0.012   15.1   0.0   1   1   2.3e-05     0.031   13.7   0.0   196   218   196   233   173   271 0.81 DNA methylase
Methyltransf_15      PF09445.5    164 sp|P50840|YPSC_BACSU -            385     0.015   14.8   0.0   2   2   0.00056      0.75    9.3   0.0    24    81   255   308   247   328 0.88 RNA cap guanine-N2 methyltransferase
Helicase_C_2         PF13307.1    167 sp|P50831|YPVA_BACSU -            641   5.5e-28   97.9   0.0   1   1     6e-31   1.8e-27   96.3   0.0     4   146   484   617   481   620 0.92 Helicase C-terminal domain
DEAD                 PF00270.24   169 sp|P50831|YPVA_BACSU -            641    0.0005   19.6   0.1   1   2   4.6e-06     0.014   14.9   0.0    13    70    56   112    47   145 0.74 DEAD/DEAH box helicase
KaiC                 PF06745.8    227 sp|P50831|YPVA_BACSU -            641     0.014   14.5   0.2   1   2   1.4e-05     0.041   13.0   0.0    14    93    52   128    43   168 0.66 KaiC
ResIII               PF04851.10   184 sp|P50831|YPVA_BACSU -            641     0.021   14.6   0.3   1   1   3.6e-05      0.11   12.3   0.3     3    69    38   105    36   283 0.78 Type III restriction enzyme, res subunit
PhoH                 PF02562.11   205 sp|P50831|YPVA_BACSU -            641      0.13   11.4   0.0   1   2   0.00013      0.38    9.9   0.0    14    45    52    83    41   129 0.83 PhoH-like protein
gerPA                PF10676.4     73 sp|O32013|YPZD_BACSU -             70   3.3e-21   74.9   4.2   1   1   2.4e-25   3.5e-21   74.8   4.2     6    72     4    69     1    70 0.94 Spore germination protein gerPA/gerPF
Phage_portal         PF04860.7    347 sp|P45917|YQBA_BACSU -            510   1.7e-23   82.9   0.5   1   1   3.6e-27   5.3e-23   81.2   0.5    67   346   112   449    87   450 0.87 Phage portal protein
Baseplate_J          PF04865.9    243 sp|P45935|YQBT_BACSU -            348   1.1e-53  182.1   0.5   1   1   8.8e-58   1.3e-53  181.8   0.5     2   242    62   305    61   306 0.94 Baseplate J-like protein
YqcI_YcgG            PF08892.6    219 sp|P45944|YQCI_BACSU -            254   9.4e-89  296.7   0.4   1   1   7.3e-93   1.1e-88  296.4   0.4     3   218    24   243    22   244 0.98 YqcI/YcgG family
NAD_binding_2        PF03446.10   163 sp|P54448|YQEC_BACSU -            297   2.4e-41  141.2   0.0   1   1   2.5e-44   3.4e-41  140.7   0.0     2   155     1   153     1   162 0.96 NAD binding domain of 6-phosphogluconate dehydrogenase
6PGD                 PF00393.14   291 sp|P54448|YQEC_BACSU -            297   1.2e-20   73.9   0.6   1   2   2.4e-23   3.2e-20   72.5   0.4     1   115   166   274   166   284 0.87 6-phosphogluconate dehydrogenase, C-terminal domain
UDPG_MGDP_dh_N       PF03721.9    185 sp|P54448|YQEC_BACSU -            297   2.6e-05   23.6   0.6   1   1   4.2e-08   5.6e-05   22.5   0.4     1    41     1    41     1    47 0.96 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain
F420_oxidored        PF03807.12    96 sp|P54448|YQEC_BACSU -            297   6.2e-05   23.3   0.0   1   1   8.1e-08   0.00011   22.5   0.0     1    95     2    94     2    95 0.89 NADP oxidoreductase coenzyme F420-dependent
3HCDH_N              PF02737.13   180 sp|P54448|YQEC_BACSU -            297   0.00015   21.4   0.1   1   1   1.9e-07   0.00025   20.7   0.1     1    45     2    46     2    58 0.87 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain
TrkA_N               PF02254.13   116 sp|P54448|YQEC_BACSU -            297   0.00085   19.3   0.1   1   2   3.8e-06    0.0051   16.8   0.1     3    42     5    44     3    51 0.89 TrkA-N domain
NAD_binding_11       PF14833.1    122 sp|P54448|YQEC_BACSU -            297    0.0024   17.9   0.0   1   1     3e-06     0.004   17.1   0.0     1    52   164   218   164   263 0.85 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase
NAD_Gly3P_dh_N       PF01210.18   157 sp|P54448|YQEC_BACSU -            297    0.0048   16.6   0.0   1   1   0.00013      0.17   11.5   0.0     1   115     2   105     2   114 0.73 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus
2-Hacid_dh_C         PF02826.14   178 sp|P54448|YQEC_BACSU -            297     0.014   14.5   0.0   1   1   1.6e-05     0.022   13.9   0.0    38    89     2    54     1    63 0.89 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain
PDH                  PF02153.12   258 sp|P54448|YQEC_BACSU -            297     0.055   12.3   0.0   1   1   5.9e-05      0.08   11.8   0.0    10    80    22    94    17   117 0.85 Prephenate dehydrogenase
GFO_IDH_MocA         PF01408.17   120 sp|P54448|YQEC_BACSU -            297     0.081   13.4   0.0   1   1   0.00012      0.16   12.4   0.0     1    73     1    70     1    87 0.87 Oxidoreductase family, NAD-binding Rossmann fold
MMR_HSR1             PF01926.18   116 sp|P54453|YQEH_BACSU -            366   2.6e-13   49.9   0.1   1   1     6e-16   5.2e-13   48.9   0.1     1    65   161   227   161   254 0.80 50S ribosome-binding GTPase
DUF258               PF03193.11   161 sp|P54453|YQEH_BACSU -            366     7e-08   31.8   0.0   1   1   1.3e-10   1.1e-07   31.1   0.0    15   110   135   234   119   241 0.77 Protein of unknown function, DUF258
Miro                 PF08477.8    119 sp|P54453|YQEH_BACSU -            366   1.6e-05   25.3   0.0   2   2   2.3e-06     0.002   18.6   0.0     2    75   162   233   161   238 0.73 Miro-like protein
FeoB_N               PF02421.13   156 sp|P54453|YQEH_BACSU -            366   6.6e-05   22.2   0.1   2   2   2.3e-06     0.002   17.4   0.1     3    58   162   220   160   234 0.78 Ferrous iron transport protein B
Dynamin_N            PF00350.18   168 sp|P54453|YQEH_BACSU -            366   0.00011   22.0   0.5   1   2   2.4e-05     0.021   14.6   0.1     1    34   162   194   162   201 0.87 Dynamin family
Ras                  PF00071.17   162 sp|P54453|YQEH_BACSU -            366   0.00058   19.2   0.0   1   2   0.00019      0.17   11.2   0.0    91   156    83   153    44   156 0.75 Ras family
ArgK                 PF03308.11   267 sp|P54453|YQEH_BACSU -            366     0.001   17.9   0.1   1   2   0.00016      0.14   10.8   0.0   171   230    99   158    64   162 0.79 ArgK protein
MobB                 PF03205.9    140 sp|P54453|YQEH_BACSU -            366    0.0011   18.6   0.4   1   1     4e-06    0.0035   17.0   0.2     3    25   162   184   160   192 0.89 Molybdopterin guanine dinucleotide synthesis protein B
ABC_tran             PF00005.22   137 sp|P54453|YQEH_BACSU -            366    0.0097   16.2   0.0   1   1   1.7e-05     0.015   15.5   0.0    10    72   158   245   154   338 0.66 ABC transporter
DUF2384              PF09722.5     54 sp|P54453|YQEH_BACSU -            366     0.014   15.2   0.0   1   1     3e-05     0.026   14.3   0.0    11    52    97   155    86   158 0.77 Protein of unknown function (DUF2384)
Arch_ATPase          PF01637.13   234 sp|P54453|YQEH_BACSU -            366     0.025   14.2   0.4   2   2    0.0002      0.18   11.5   0.0    10    45   152   184   141   198 0.72 Archaeal ATPase
AAA_14               PF13173.1    128 sp|P54453|YQEH_BACSU -            366      0.05   13.5   0.1   1   1   0.00014      0.12   12.2   0.0     3    35   160   192   158   236 0.84 AAA domain
RNA_helicase         PF00910.17   107 sp|P54453|YQEH_BACSU -            366     0.074   13.2   0.0   1   1   0.00018      0.16   12.1   0.0     1    29   162   190   162   201 0.84 RNA helicase
AIG1                 PF04548.11   212 sp|P54453|YQEH_BACSU -            366      0.12   11.4   0.0   1   1   0.00024      0.21   10.6   0.0     3    72   162   232   160   242 0.71 AIG1 family
T2SE                 PF00437.15   272 sp|P54453|YQEH_BACSU -            366      0.15   10.8   0.0   1   1   0.00028      0.25   10.2   0.0   124   161   156   191   104   207 0.82 Type II/IV secretion system protein
Methyltransf_18      PF12847.2    112 sp|P54458|YQEM_BACSU -            247     4e-21   75.6   0.0   1   1   1.7e-23     1e-20   74.3   0.0     2   110    33   136    32   138 0.92 Methyltransferase domain
Methyltransf_23      PF13489.1    161 sp|P54458|YQEM_BACSU -            247     1e-20   74.0   0.1   1   1   4.7e-23   2.8e-20   72.6   0.1    13   159    23   217    10   219 0.73 Methyltransferase domain
Methyltransf_31      PF13847.1    152 sp|P54458|YQEM_BACSU -            247   5.2e-20   71.5   0.0   1   1   1.3e-22   7.9e-20   70.9   0.0     4   112    33   139    31   188 0.82 Methyltransferase domain
Methyltransf_11      PF08241.7     95 sp|P54458|YQEM_BACSU -            247   1.2e-18   67.3   0.0   1   1   4.7e-21   2.8e-18   66.1   0.0     1    95    37   135    37   135 0.95 Methyltransferase domain
Methyltransf_25      PF13649.1    101 sp|P54458|YQEM_BACSU -            247   2.1e-17   63.3   0.1   1   1   1.3e-19   7.4e-17   61.5   0.0     1   101    36   131    36   131 0.93 Methyltransferase domain
Ubie_methyltran      PF01209.13   233 sp|P54458|YQEM_BACSU -            247   4.4e-16   58.6   0.0   1   2   3.5e-18   2.1e-15   56.4   0.0    18   151     8   135     1   153 0.82 ubiE/COQ5 methyltransferase family
Methyltransf_12      PF08242.7     99 sp|P54458|YQEM_BACSU -            247   4.3e-15   55.9   0.0   1   1   1.6e-17   9.2e-15   54.9   0.0     1    99    37   133    37   133 0.87 Methyltransferase domain
Methyltransf_26      PF13659.1    117 sp|P54458|YQEM_BACSU -            247     2e-10   40.7   0.0   1   1   4.9e-13   2.9e-10   40.1   0.0     2   113    34   135    33   139 0.91 Methyltransferase domain
NodS                 PF05401.6    201 sp|P54458|YQEM_BACSU -            247   6.1e-09   35.5   0.0   1   1   1.5e-11   8.6e-09   35.0   0.0    45   145    34   136    16   142 0.91 Nodulation protein S (NodS)
CMAS                 PF02353.15   273 sp|P54458|YQEM_BACSU -            247   2.2e-08   33.5   0.0   1   1   5.4e-11   3.2e-08   32.9   0.0    63   165    33   136    12   165 0.87 Mycolic acid cyclopropane synthetase
MTS                  PF05175.9    170 sp|P54458|YQEM_BACSU -            247   2.8e-08   33.3   0.0   1   1   6.8e-11     4e-08   32.8   0.0    16   138    19   135    11   155 0.81 Methyltransferase small domain
TehB                 PF03848.9    192 sp|P54458|YQEM_BACSU -            247     9e-06   24.9   0.0   1   1   2.4e-08   1.4e-05   24.3   0.0    30    96    32    98    19   129 0.78 Tellurite resistance protein TehB
RrnaAD               PF00398.15   262 sp|P54458|YQEM_BACSU -            247   3.3e-05   23.0   0.0   1   1   9.3e-08   5.5e-05   22.3   0.0    26    88    28    90     8   105 0.90 Ribosomal RNA adenine dimethylase
Methyltransf_8       PF05148.10   219 sp|P54458|YQEM_BACSU -            247   0.00015   21.4   0.0   1   1   8.1e-07   0.00048   19.8   0.0    57   169    16   147     2   155 0.72 Hypothetical methyltransferase
TPMT                 PF05724.6    218 sp|P54458|YQEM_BACSU -            247   0.00029   20.3   0.0   1   1   9.9e-07   0.00059   19.3   0.0    30   106    26   106    16   126 0.66 Thiopurine S-methyltransferase (TPMT)
MetW                 PF07021.7    193 sp|P54458|YQEM_BACSU -            247   0.00048   19.5   0.0   1   1   1.3e-06   0.00076   18.9   0.0     7    96    26   118    21   135 0.74 Methionine biosynthesis protein MetW
N2227                PF07942.7    272 sp|P54458|YQEM_BACSU -            247   0.00083   18.3   0.6   1   2   0.00064      0.38    9.6   0.0    58    92    33    67    19    79 0.87 N2227-like protein
DREV                 PF05219.7    265 sp|P54458|YQEM_BACSU -            247    0.0024   16.7   0.0   1   2   2.3e-05     0.014   14.3   0.0    91   182    29   131    15   145 0.68 DREV methyltransferase
Methyltransf_24      PF13578.1    106 sp|P54458|YQEM_BACSU -            247    0.0076   17.0   0.0   1   1   3.4e-05      0.02   15.7   0.0    21   104    53   136    22   137 0.71 Methyltransferase domain
UPF0020              PF01170.13   180 sp|P54458|YQEM_BACSU -            247    0.0082   15.7   0.0   1   1   2.2e-05     0.013   15.0   0.0    29   139    33   129    27   158 0.78 Putative RNA methylase family UPF0020
WXG100               PF06013.7     86 sp|P54458|YQEM_BACSU -            247     0.012   15.5   0.0   1   1   5.2e-05     0.031   14.2   0.0    41    85   183   227   173   228 0.95 Proteins of 100 residues with WXG
tRNA_U5-meth_tr      PF05958.6    352 sp|P54458|YQEM_BACSU -            247     0.019   13.6   0.0   1   1   5.6e-05     0.033   12.8   0.0   190   239    26    75    19    80 0.87 tRNA (Uracil-5-)-methyltransferase
Methyltransf_15      PF09445.5    164 sp|P54458|YQEM_BACSU -            247     0.031   13.8   0.0   1   1     8e-05     0.048   13.2   0.0     3    42    35    74    33   130 0.84 RNA cap guanine-N2 methyltransferase
FmrO                 PF07091.6    251 sp|P54458|YQEM_BACSU -            247     0.049   12.6   0.0   1   2   0.00046      0.27   10.1   0.0   101   150    28    75    17    86 0.83 Ribosomal RNA methyltransferase (FmrO)
Radical_SAM          PF04055.16   166 sp|P54304|YQER_BACSU -            379   1.2e-23   84.1   0.0   1   1     8e-27     2e-23   83.3   0.0     2   164     6   176     5   178 0.94 Radical SAM superfamily
HemN_C               PF06969.11    66 sp|P54304|YQER_BACSU -            379   2.1e-15   56.5   0.0   1   1   2.9e-18   7.3e-15   54.7   0.0     2    66   302   366   301   366 0.97 HemN C-terminal domain
Fer4_14              PF13394.1    119 sp|P54304|YQER_BACSU -            379   0.00013   21.9   0.0   1   1   1.2e-07   0.00031   20.7   0.0     5    78     8    82     4   110 0.66 4Fe-4S single cluster domain
Fer4_12              PF13353.1    139 sp|P54304|YQER_BACSU -            379    0.0021   18.1   0.0   1   1   1.6e-06    0.0039   17.2   0.0    15   111    11   111     4   120 0.69 4Fe-4S single cluster domain
HTH_45               PF14947.1     77 sp|P54304|YQER_BACSU -            379     0.012   15.4   0.0   1   1   5.1e-05      0.13   12.1   0.0    38    65   340   367   336   372 0.88 Winged helix-turn-helix
YdfA_immunity        PF12127.3    318 sp|P54466|YQFA_BACSU -            331  1.5e-167  556.3  18.3   1   1  2.4e-171  1.8e-167  556.0  18.3     2   316     7   321     6   323 0.99 SigmaW regulon antibacterial
Seryl_tRNA_N         PF02403.17   108 sp|P54466|YQFA_BACSU -            331    0.0011   18.9   2.4   1   1     3e-07    0.0022   17.9   2.4     4    97   190   283   189   289 0.88 Seryl-tRNA synthetase N-terminal domain
DUF2179              PF10035.4     55 sp|P54478|YQFU_BACSU -            293   1.9e-22   78.6   1.2   1   1   1.2e-25   4.6e-22   77.3   1.2     1    55   231   285   231   285 0.99 Uncharacterized protein conserved in bacteria (DUF2179)
DUF161               PF02588.10    82 sp|P54478|YQFU_BACSU -            293   2.1e-22   79.2  32.2   1   2   2.3e-10   8.5e-07   29.1  14.9     2    79    19   101    18   103 0.94 Uncharacterized BCR, YitT family COG1284
DUF161               PF02588.10    82 sp|P54478|YQFU_BACSU -            293   2.1e-22   79.2  32.2   2   2   9.4e-19   3.5e-15   56.0   9.3     2    77   118   193   117   198 0.94 Uncharacterized BCR, YitT family COG1284
Ribosomal_L14        PF00238.14   122 sp|P54478|YQFU_BACSU -            293     0.048   13.4   1.0   2   2   2.2e-05     0.081   12.6   0.2    33   101   219   291   198   293 0.71 Ribosomal protein L14p/L23e
Acid_phosphat_B      PF03767.9    230 sp|P54480|YQFW_BACSU -            193     0.001   18.5   0.1   1   1   8.8e-07    0.0016   17.8   0.1    99   168    44   117     4   132 0.74 HAD superfamily, subfamily IIIB (Acid phosphatase)
5-nucleotidase       PF06189.7    264 sp|P54480|YQFW_BACSU -            193     0.049   12.4   0.1   1   1   3.6e-05     0.068   11.9   0.1   187   246    83   142    63   155 0.81 5'-nucleotidase
HAD                  PF12710.2    192 sp|P54480|YQFW_BACSU -            193      0.05   13.7   1.1   1   1   8.4e-05      0.16   12.1   1.1     4   171     7   135     5   145 0.54 haloacid dehalogenase-like hydrolase
Glyco_trans_1_3      PF13528.1    318 sp|P54480|YQFW_BACSU -            193      0.05   12.7   0.1   1   1   5.5e-05       0.1   11.7   0.0    85   139   121   174   104   189 0.81 Glycosyl transferase family 1
CbiJ                 PF02571.9    250 sp|P54480|YQFW_BACSU -            193     0.095   12.0   0.0   1   1   7.8e-05      0.14   11.4   0.0    83   129   139   185   133   191 0.85 Precorrin-6x reductase CbiJ/CobK
Peripla_BP_4         PF13407.1    257 sp|P54480|YQFW_BACSU -            193      0.11   11.8   0.0   1   1   9.8e-05      0.18   11.1   0.0    72    96   141   164   135   173 0.78 Periplasmic binding protein domain
Transpeptidase       PF00905.17   304 sp|P54488|YQGF_BACSU -            716   1.1e-85  287.3   6.0   2   2   1.5e-89   1.1e-85  287.3   6.0     2   304   353   682   352   682 0.97 Penicillin binding protein transpeptidase domain
PBP_dimer            PF03717.10   179 sp|P54488|YQGF_BACSU -            716   7.6e-36  123.8  13.5   1   1     1e-39   7.6e-36  123.8  13.5     4   178    67   306    64   307 0.92 Penicillin-binding Protein dimerisation domain
BPD_transp_1         PF00528.17   185 sp|P46339|YQGH_BACSU -            309   1.6e-33  115.7  14.6   3   3   2.1e-37   1.6e-33  115.7  14.6     1   184   107   308   107   309 0.96 Binding-protein-dependent transport system inner membrane component
FixQ                 PF05545.6     49 sp|P46339|YQGH_BACSU -            309       1.4    8.5   3.9   1   1   7.9e-05      0.59    9.8   0.2     8    36   280   308   278   309 0.89 Cbb3-type cytochrome oxidase component FixQ
BPD_transp_1         PF00528.17   185 sp|P46340|YQGI_BACSU -            294   2.3e-57  193.5   9.4   2   2   1.5e-61   2.3e-57  193.5   9.4     1   184    80   292    80   293 0.99 Binding-protein-dependent transport system inner membrane component
Glycos_transf_1      PF00534.15   172 sp|P54490|YQGM_BACSU -            359   5.3e-41  139.9   0.0   1   1   3.5e-44   7.5e-41  139.4   0.0     3   171   163   330   161   331 0.97 Glycosyl transferases group 1
Glyco_trans_4_4      PF13579.1    160 sp|P54490|YQGM_BACSU -            359   7.6e-15   55.4   0.0   1   1     1e-17   2.2e-14   53.9   0.0    64   159    62   158     4   159 0.72 Glycosyl transferase 4-like domain
Glyco_trans_1_4      PF13692.1    135 sp|P54490|YQGM_BACSU -            359   3.1e-12   46.8   0.0   1   1   2.8e-15     6e-12   45.8   0.0     3   130   176   312   174   317 0.82 Glycosyl transferases group 1
Glyco_transf_4       PF13439.1    177 sp|P54490|YQGM_BACSU -            359   2.8e-07   30.4   0.2   1   2   4.4e-10   9.3e-07   28.7   0.1    77   171    68   160    16   166 0.84 Glycosyltransferase Family 4
Glyco_trans_1_2      PF13524.1     92 sp|P54490|YQGM_BACSU -            359   3.5e-07   30.4   0.0   1   1   3.7e-10   7.9e-07   29.2   0.0     2    85   255   340   254   347 0.90 Glycosyl transferases group 1
Glyco_transf_5       PF08323.6    245 sp|P54490|YQGM_BACSU -            359   2.2e-05   24.0   0.0   2   2   2.8e-07   0.00058   19.4   0.1   125   176    60   107    46   125 0.80 Starch synthase catalytic domain
Glycogen_syn         PF05693.8    633 sp|P54490|YQGM_BACSU -            359     0.013   13.7   0.0   1   1     9e-06     0.019   13.2   0.0   466   514   248   293   237   335 0.77 Glycogen synthase
5-FTHF_cyc-lig       PF01812.15   186 sp|P54491|YQGN_BACSU -            187   5.9e-53  179.4   0.0   1   1   8.9e-57   6.6e-53  179.2   0.0     1   186     2   179     2   179 0.99 5-formyltetrahydrofolate cyclo-ligase family
FAE1_CUT1_RppA       PF08392.7    290 sp|P54491|YQGN_BACSU -            187     0.069   12.2   0.0   1   1   1.4e-05      0.11   11.6   0.0    58   114    67   125    55   129 0.82 FAE1/Type III polyketide synthase-like protein
Sulfatase            PF00884.18   308 sp|P54496|YQGS_BACSU -            638   2.8e-36  125.2   0.4   1   1     1e-39   3.7e-36  124.8   0.4     1   308   245   536   245   536 0.86 Sulfatase
Phosphodiest         PF01663.17   365 sp|P54496|YQGS_BACSU -            638   0.00021   20.7   0.0   2   2   1.6e-07   0.00058   19.2   0.0   210   253   434   478   408   538 0.81 Type I phosphodiesterase / nucleotide pyrophosphatase
DUF4284              PF14112.1    122 sp|P54496|YQGS_BACSU -            638    0.0068   16.8   2.0   1   1   3.7e-06     0.014   15.8   0.3    37   117   410   486   406   489 0.79 Domain of unknown function (DUF4284)
DUF229               PF02995.12   497 sp|P54496|YQGS_BACSU -            638     0.013   13.9   0.0   1   1   5.1e-06     0.019   13.4   0.0   301   342   429   470   418   544 0.88 Protein of unknown function (DUF229)
Peptidase_M14        PF00246.19   279 sp|P54497|YQGT_BACSU -            376   2.9e-38  132.1   0.0   1   1   6.4e-42   4.8e-38  131.3   0.0     7   274    95   362    89   366 0.84 Zinc carboxypeptidase
BCL9                 PF11502.3     40 sp|P54497|YQGT_BACSU -            376      0.15   11.6   0.8   1   1     4e-05      0.29   10.6   0.8     8    26    50    68    49    73 0.88 B-cell lymphoma 9 protein
DUF77                PF01910.12    92 sp|P54499|YQGV_BACSU -            104   1.7e-34  117.3   0.1   1   1   5.1e-38   1.9e-34  117.1   0.1     1    91     4    98     4    99 0.97 Domain of unknown function DUF77
DUF2732              PF10809.3     77 sp|P54499|YQGV_BACSU -            104    0.0074   15.8   0.0   1   1   2.9e-06     0.011   15.3   0.0     5    49    59   103    57   104 0.92 Protein of unknown function (DUF2732)
Ykof                 PF07615.6     81 sp|P54499|YQGV_BACSU -            104     0.038   14.1   0.0   1   1   1.4e-05     0.052   13.7   0.0    14    69    19    75     3    80 0.86 YKOF-related Family
DUF1409              PF07197.7     51 sp|P54499|YQGV_BACSU -            104     0.039   14.0   0.2   2   3   0.00016       0.6   10.2   0.0    15    47    36    68    34    74 0.92 Protein of unknown function (DUF1409)
Lactamase_B          PF00753.22   194 sp|P54501|YQGX_BACSU -            211   1.2e-33  116.4   3.3   1   1   2.6e-37   1.3e-33  116.3   3.3     2   194     9   190     8   190 0.98 Metallo-beta-lactamase superfamily
Lactamase_B_2        PF12706.2    194 sp|P54501|YQGX_BACSU -            211   4.6e-08   32.8   0.1   1   1   1.1e-11   5.4e-08   32.6   0.1     3   139    25   151    23   187 0.68 Beta-lactamase superfamily domain
Lactamase_B_3        PF13483.1    163 sp|P54501|YQGX_BACSU -            211     0.017   14.8   0.0   1   1   4.8e-06     0.024   14.3   0.0     7    86    13   113    10   168 0.65 Beta-lactamase superfamily domain
DUF21                PF01595.15   183 sp|P54505|YQHB_BACSU -            442   2.8e-54  183.1   5.9   1   1   8.2e-58     4e-54  182.6   5.9     2   183    14   210    13   210 0.99 Domain of unknown function DUF21
CBS                  PF00571.23    57 sp|P54505|YQHB_BACSU -            442   4.5e-14   51.9   1.8   1   2   3.9e-09     2e-05   24.3   0.1     1    55   225   283   225   285 0.92 CBS domain
CBS                  PF00571.23    57 sp|P54505|YQHB_BACSU -            442   4.5e-14   51.9   1.8   2   2   5.6e-10   2.8e-06   27.0   0.2     5    56   299   349   295   350 0.92 CBS domain
CorC_HlyC            PF03471.12    81 sp|P54505|YQHB_BACSU -            442   3.5e-13   49.1   0.2   2   2   3.4e-16   1.7e-12   46.9   0.0     2    80   366   441   365   442 0.87 Transporter associated domain
SNF2_N               PF00176.18   299 sp|P54509|YQHH_BACSU -            557   4.8e-42  143.7   3.2   1   1   4.4e-45   9.4e-42  142.8   3.2    24   273    75   314    61   360 0.83 SNF2 family N-terminal domain
Helicase_C           PF00271.26    78 sp|P54509|YQHH_BACSU -            557   5.2e-18   64.6   0.0   1   1   6.3e-21   1.3e-17   63.3   0.0     2    78   391   466   390   466 0.90 Helicase conserved C-terminal domain
ResIII               PF04851.10   184 sp|P54509|YQHH_BACSU -            557   1.5e-10   41.2   0.8   1   1   2.8e-13     6e-10   39.2   0.1     2   183    58   207    57   208 0.76 Type III restriction enzyme, res subunit
DEAD                 PF00270.24   169 sp|P54509|YQHH_BACSU -            557   4.1e-09   36.1   2.0   1   1   2.9e-12   6.2e-09   35.5   0.1     3   166    63   211    61   214 0.76 DEAD/DEAH box helicase
AAA_22               PF13401.1    131 sp|P54509|YQHH_BACSU -            557   0.00067   19.8   0.9   1   2   4.5e-06    0.0095   16.0   0.0    12   115    84   198    76   215 0.74 AAA domain
Helicase_C_4         PF13871.1    278 sp|P54509|YQHH_BACSU -            557    0.0007   19.1   0.0   2   2   1.7e-06    0.0036   16.7   0.0    59   131   419   483   411   495 0.85 Helicase_C-like
DUF2075              PF09848.4    352 sp|P54509|YQHH_BACSU -            557    0.0018   17.3   0.3   1   2   2.1e-06    0.0045   16.0   0.0    11   105    86   190    84   206 0.80 Uncharacterized conserved protein (DUF2075)
Peptidase_M24        PF00557.19   207 sp|P54518|YQHT_BACSU -            353   4.8e-63  212.4   0.1   1   1   8.8e-67   6.6e-63  212.0   0.1     3   207   136   337   134   337 0.96 Metallopeptidase family M24
Creatinase_N         PF01321.13   132 sp|P54518|YQHT_BACSU -            353   4.6e-31  108.0   0.0   1   1   9.3e-35   6.9e-31  107.4   0.0     1   132     2   127     2   127 0.93 Creatinase/Prolidase N-terminal domain
Asp23                PF03780.8    108 sp|P54519|YQHY_BACSU -            135   1.7e-36  124.7   5.3   1   1   1.4e-40   2.1e-36  124.4   5.3     2   108    16   121    15   121 0.97 Asp23 family
Oxidored_FMN         PF00724.15   341 sp|P54524|YQIG_BACSU -            372    2e-113  378.8   0.0   1   1    6e-117  2.2e-113  378.7   0.0     2   341     8   338     7   338 0.99 NADH:flavin oxidoreductase / NADH oxidase family
DHO_dh               PF01180.16   295 sp|P54524|YQIG_BACSU -            372     4e-05   22.7   0.0   1   1   1.8e-08   6.6e-05   21.9   0.0   237   290   282   334   276   339 0.91 Dihydroorotate dehydrogenase
Dus                  PF01207.12   310 sp|P54524|YQIG_BACSU -            372     0.063   12.1   0.1   2   2   4.3e-05      0.16   10.7   0.0   183   239   287   341   278   358 0.82 Dihydrouridine synthase (Dus)
Amidase_3            PF01520.13   175 sp|P54525|YQII_BACSU -            206   4.1e-57  192.7   0.4   1   1   6.3e-61   4.6e-57  192.5   0.4     1   174    32   201    32   202 0.99 N-acetylmuramoyl-L-alanine amidase
CsgG                 PF03783.9    209 sp|P54525|YQII_BACSU -            206      0.03   13.3   0.1   1   1   5.8e-06     0.043   12.8   0.1    21    95   117   199    96   206 0.85 Curli production assembly/transport component CsgG
Disulph_isomer       PF06491.6    136 sp|P54534|YQIW_BACSU -            145     4e-65  217.7   0.1   1   1     3e-69   4.5e-65  217.6   0.1     1   136     8   142     8   142 1.00 Disulphide isomerase
YkuD                 PF03734.9    144 sp|P54539|YQJB_BACSU -            176   6.5e-20   71.8   0.1   1   1   5.3e-24   7.8e-20   71.6   0.1     2   144    27   150    26   150 0.83 L,D-transpeptidase catalytic domain
Glyoxalase_4         PF13669.1    109 sp|P54540|YQJC_BACSU -            140   8.5e-22   77.2   0.0   1   1   3.7e-25   1.4e-21   76.5   0.0     1   109     5   115     5   115 0.97 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily
Glyoxalase           PF00903.20   128 sp|P54540|YQJC_BACSU -            140   3.5e-13   49.6   0.0   1   1   1.1e-16     4e-13   49.4   0.0     1   128     3   128     3   128 0.93 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily
Glyoxalase_2         PF12681.2    108 sp|P54540|YQJC_BACSU -            140   3.5e-06   27.5   0.0   1   1   1.1e-09   4.1e-06   27.3   0.0     1   107     9   128     9   129 0.69 Glyoxalase-like domain
Glyoxalase_3         PF13468.1    175 sp|P54540|YQJC_BACSU -            140   3.2e-05   23.9   0.0   1   1   1.1e-08   4.1e-05   23.5   0.0     1   135     4   129     4   140 0.71 Glyoxalase-like domain
Peptidase_M20        PF01546.23   189 sp|P54542|YQJE_BACSU -            371   2.4e-27   95.6   2.3   1   1   8.9e-31   3.3e-27   95.2   2.3     2   188    73   367    72   368 0.84 Peptidase family M20/M25/M40
Peptidase_M42        PF05343.9    292 sp|P54542|YQJE_BACSU -            371   7.5e-18   64.2   0.9   1   3   1.2e-05     0.043   12.5   0.0     1    39    56    96    56   100 0.92 M42 glutamyl aminopeptidase
Peptidase_M42        PF05343.9    292 sp|P54542|YQJE_BACSU -            371   7.5e-18   64.2   0.9   2   3   2.1e-11   7.9e-08   31.4   0.1   134   189   106   163   102   170 0.88 M42 glutamyl aminopeptidase
Peptidase_M42        PF05343.9    292 sp|P54542|YQJE_BACSU -            371   7.5e-18   64.2   0.9   3   3   3.4e-07    0.0013   17.6   0.0   228   291   296   360   260   361 0.80 M42 glutamyl aminopeptidase
M20_dimer            PF07687.9    112 sp|P54542|YQJE_BACSU -            371   5.7e-15   55.0   0.9   1   2     5e-18   1.9e-14   53.3   0.4    11   109   181   272   177   275 0.91 Peptidase dimerisation domain
Peptidase_M28        PF04389.12   179 sp|P54542|YQJE_BACSU -            371   1.3e-11   44.5   0.1   1   2     6e-12   2.2e-08   34.0   0.1     2    71    70   150    69   207 0.83 Peptidase family M28
Lactamase_B          PF00753.22   194 sp|P54553|YQJP_BACSU -            319   3.2e-24   85.6   0.0   1   1   1.5e-27   4.4e-24   85.2   0.0     4   194    18   231    15   231 0.97 Metallo-beta-lactamase superfamily
Lactamase_B_2        PF12706.2    194 sp|P54553|YQJP_BACSU -            319   2.5e-06   27.1   0.0   1   1   1.2e-09   3.5e-06   26.7   0.0     4    73    32    98    30   231 0.68 Beta-lactamase superfamily domain
HTH_20               PF12840.2     61 sp|P54553|YQJP_BACSU -            319    0.0038   16.9   0.0   1   1   2.6e-06    0.0078   15.9   0.0    17    60   258   309   255   310 0.89 Helix-turn-helix domain
adh_short            PF00106.20   167 sp|P54554|YQJQ_BACSU -            259     1e-27   97.0   0.0   1   1   6.1e-31   1.3e-27   96.7   0.0     3   166     9   170     7   171 0.95 short chain dehydrogenase
adh_short_C2         PF13561.1    241 sp|P54554|YQJQ_BACSU -            259   2.9e-15   56.6   0.0   1   1   1.8e-18   3.8e-15   56.3   0.0     6   191    16   195    13   222 0.86 Enoyl-(Acyl carrier protein) reductase
KR                   PF08659.5    181 sp|P54554|YQJQ_BACSU -            259   2.2e-07   30.7   0.0   1   1   1.4e-10     3e-07   30.2   0.0     4   158    10   161     8   187 0.77 KR domain
NAD_binding_10       PF13460.1    183 sp|P54554|YQJQ_BACSU -            259   1.3e-06   28.5   0.0   1   1   8.3e-10   1.8e-06   28.1   0.0     1   180     9   220     9   223 0.71 NADH(P)-binding
Epimerase            PF01370.16   236 sp|P54554|YQJQ_BACSU -            259    0.0017   17.8   0.1   1   1   2.7e-06    0.0057   16.1   0.1     1    92     9   111     9   183 0.72 NAD dependent epimerase/dehydratase family
3HCDH_N              PF02737.13   180 sp|P54554|YQJQ_BACSU -            259    0.0079   15.8   0.0   1   1   5.7e-06     0.012   15.2   0.0     3    50    10    58     8    87 0.86 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain
Polysacc_synt_2      PF02719.10   294 sp|P54554|YQJQ_BACSU -            259     0.012   14.5   0.0   1   1   7.2e-06     0.015   14.1   0.0     1    88     9    91     9   179 0.72 Polysaccharide biosynthesis protein
MFS_1                PF07690.11   352 sp|P54559|YQJV_BACSU -            410   3.2e-43  147.8  64.4   1   2   5.3e-39   1.1e-35  122.9  37.0     1   343    14   347    14   348 0.82 Major Facilitator Superfamily
MFS_1                PF07690.11   352 sp|P54559|YQJV_BACSU -            410   3.2e-43  147.8  64.4   2   2   2.2e-13   4.8e-10   38.6  19.4     2   175   218   395   217   409 0.80 Major Facilitator Superfamily
Sugar_tr             PF00083.19   451 sp|P54559|YQJV_BACSU -            410   2.6e-07   29.5  10.5   1   1   1.2e-10   2.6e-07   29.5  10.5    42   179    41   175    16   189 0.83 Sugar (and other) transporter
MFS_2                PF13347.1    428 sp|P54559|YQJV_BACSU -            410   4.6e-07   28.5  33.3   1   1   6.6e-10   1.4e-06   26.9  33.4    10   345    18   329    10   392 0.69 MFS/sugar transport protein
LacY_symp            PF01306.14   413 sp|P54559|YQJV_BACSU -            410   4.6e-05   22.1  23.5   1   1   3.4e-08   7.1e-05   21.5  23.5    23   397    25   385    11   403 0.69 LacY proton/sugar symporter
MFS_3                PF05977.8    524 sp|P54559|YQJV_BACSU -            410    0.0003   19.0  15.5   1   2   1.4e-07    0.0003   19.0  15.5    20   332    19   328     7   339 0.81 Transmembrane secretion effector
MFS_1_like           PF12832.2     77 sp|P54559|YQJV_BACSU -            410   0.00086   19.0   6.3   1   2   9.2e-07     0.002   17.9   1.2    16    69    25    79     7    87 0.90 MFS_1 like family
Nuc_H_symport        PF03825.11   400 sp|P54559|YQJV_BACSU -            410    0.0071   15.1   3.7   1   2   3.4e-06    0.0071   15.1   3.7   229   306    31   107    12   132 0.82 Nucleoside H+ symporter
GrpB                 PF04229.9    167 sp|P54564|YQKA_BACSU -            343   5.8e-61  205.0   0.4   1   1   6.9e-64   8.6e-61  204.5   0.4     2   167   152   314   151   314 0.97 GrpB protein
Acetyltransf_1       PF00583.19    83 sp|P54564|YQKA_BACSU -            343   3.6e-14   52.5   0.0   1   1   5.6e-17   6.9e-14   51.6   0.0     2    83    57   130    56   130 0.97 Acetyltransferase (GNAT) family
Acetyltransf_7       PF13508.1     79 sp|P54564|YQKA_BACSU -            343   5.1e-08   32.9   0.1   1   1   9.4e-11   1.2e-07   31.8   0.1     2    79    50   131    49   131 0.80 Acetyltransferase (GNAT) domain
Acetyltransf_10      PF13673.1    117 sp|P54564|YQKA_BACSU -            343   9.3e-08   32.1   0.0   1   1   2.2e-10   2.7e-07   30.6   0.0    32   117    40   129    17   129 0.87 Acetyltransferase (GNAT) domain
FR47                 PF08445.5     86 sp|P54564|YQKA_BACSU -            343   1.9e-05   24.3   0.0   1   1   2.9e-08   3.6e-05   23.4   0.0    24    81    77   133    60   137 0.88 FR47-like protein
Acetyltransf_8       PF13523.1    152 sp|P54564|YQKA_BACSU -            343   3.4e-05   23.7   0.0   1   1   5.1e-08   6.3e-05   22.8   0.0    80   143    76   136    46   140 0.88 Acetyltransferase (GNAT) domain
Acetyltransf_3       PF13302.1    142 sp|P54564|YQKA_BACSU -            343   0.00011   22.4   0.0   1   2   9.7e-07    0.0012   19.0   0.0    51   142    46   130    34   130 0.80 Acetyltransferase (GNAT) domain
Acetyltransf_4       PF13420.1    155 sp|P54564|YQKA_BACSU -            343    0.0003   20.7   0.1   1   1   5.3e-07   0.00065   19.6   0.1    39   141    41   136    19   139 0.81 Acetyltransferase (GNAT) domain
Acetyltransf_CG      PF14542.1     78 sp|P54564|YQKA_BACSU -            343    0.0015   18.4   0.0   1   1   2.6e-06    0.0032   17.3   0.0     7    54    58   106    52   113 0.87 GCN5-related N-acetyl-transferase
DUF3749              PF12568.3    128 sp|P54564|YQKA_BACSU -            343     0.044   13.3   0.0   1   1   0.00013      0.16   11.5   0.0    31   104    44   117    36   138 0.78 Acetyltransferase (GNAT) domain
Acetyltransf_9       PF13527.1    127 sp|P54564|YQKA_BACSU -            343     0.078   12.8   0.0   1   1   0.00029      0.35   10.7   0.0    38   125    48   130    33   132 0.75 Acetyltransferase (GNAT) domain
GNAT_acetyltr_2      PF13718.1    196 sp|P54564|YQKA_BACSU -            343     0.095   12.0   0.0   1   1   0.00012      0.14   11.4   0.0    88   131    72   114    47   169 0.74 GNAT acetyltransferase 2
Aldo_ket_red         PF00248.16   283 sp|P54569|YQKF_BACSU -            306   1.8e-66  223.8   0.6   1   1   2.7e-70     2e-66  223.7   0.6     1   282    15   296    15   297 0.92 Aldo/keto reductase family
FtsJ                 PF01728.14   181 sp|P19672|YQXC_BACSU -            281   1.5e-15   57.6   0.0   1   1   2.5e-19   1.8e-15   57.3   0.0     1   152    62   212    62   245 0.77 FtsJ-like methyltransferase
S4                   PF01479.20    48 sp|P19672|YQXC_BACSU -            281   3.4e-09   36.0   0.0   1   1   9.9e-13   7.3e-09   34.9   0.0     1    43     6    48     6    51 0.95 S4 domain
DUF188               PF02639.9    130 sp|P17868|YQXD_BACSU -            164   6.4e-40  135.5   0.0   1   1   5.1e-44   7.6e-40  135.3   0.0     1   129    28   157    28   158 0.96 Uncharacterized BCR, YaiI/YqxD family COG1671
Phage_holin_4        PF05105.7    118 sp|P24811|YQXH_BACSU -            140   8.1e-34  115.8   1.5   1   1   6.6e-38   9.8e-34  115.5   1.5     5   117    17   127    13   128 0.96 Holin family
DJ-1_PfpI            PF01965.19   147 sp|O06006|YRAA_BACSU -            169   3.7e-41  140.0   0.0   1   1   2.1e-44   4.5e-41  139.7   0.0     1   146    31   168    31   169 0.97 DJ-1/PfpI family
DUF4066              PF13278.1    166 sp|O06006|YRAA_BACSU -            169   3.2e-13   49.2   0.0   1   1   1.9e-16     4e-13   48.9   0.0     1   151     8   151     8   153 0.85 Putative amidotransferase
GATase               PF00117.23   192 sp|O06006|YRAA_BACSU -            169   2.1e-05   24.0   0.0   1   1   1.4e-08     3e-05   23.5   0.0    23    86    50   110    18   146 0.78 Glutamine amidotransferase class-I
SNO                  PF01174.14   188 sp|O06006|YRAA_BACSU -            169    0.0033   17.0   0.0   1   1   2.1e-06    0.0044   16.6   0.0    30    78    61   106    26   122 0.79 SNO glutamine amidotransferase family
GATase_3             PF07685.9    158 sp|O06006|YRAA_BACSU -            169    0.0037   16.8   0.0   1   1     3e-06    0.0064   16.0   0.0     5    58    62   112    58   159 0.81 CobB/CobQ-like glutamine amidotransferase domain
GATase_5             PF13507.1    259 sp|O06006|YRAA_BACSU -            169    0.0062   15.4   0.0   1   1   4.7e-05     0.099   11.5   0.0    81   116    88   122    22   153 0.73 CobB/CobQ-like glutamine amidotransferase domain
Peptidase_C26        PF07722.8    217 sp|O06006|YRAA_BACSU -            169     0.048   13.1   0.0   1   1   3.8e-05      0.08   12.3   0.0   100   119    90   109    14   158 0.91 Peptidase C26
Coat_F               PF07875.7     64 sp|O06010|YRAD_BACSU -             99   3.2e-25   88.0   0.1   1   1   8.3e-29   4.1e-25   87.6   0.1     1    64    15    78    15    78 0.98 Coat F domain
DUF3231              PF11553.3    166 sp|O06010|YRAD_BACSU -             99   2.1e-05   24.0   0.0   1   1   5.8e-09   2.9e-05   23.6   0.0    93   154    13    74     8    76 0.96 Protein of unknown function (DUF3231)
DUF2383              PF09537.5    111 sp|O06010|YRAD_BACSU -             99     0.034   14.3   0.0   1   1   8.9e-06     0.044   14.0   0.0     8    58    22    72    19    83 0.92 Domain of unknown function (DUF2383)
Coat_F               PF07875.7     64 sp|O07949|YRAF_BACSU -            122   3.5e-19   68.6   0.0   1   1   6.4e-23   4.7e-19   68.2   0.0     2    64    19    81    18    81 0.98 Coat F domain
DUF3231              PF11553.3    166 sp|O07949|YRAF_BACSU -            122   1.1e-05   25.0   0.0   1   1   2.1e-09   1.6e-05   24.4   0.0    95   155    18    78     8    80 0.90 Protein of unknown function (DUF3231)
DUF3231              PF11553.3    166 sp|O07919|YRAG_BACSU -             81     0.013   15.0   0.1   1   1   9.3e-07     0.014   14.9   0.1    12    81     4    73     1    80 0.93 Protein of unknown function (DUF3231)
Glyoxalase_2         PF12681.2    108 sp|O07918|YRAH_BACSU -            128   1.5e-19   70.5   0.0   1   1   3.4e-23   1.7e-19   70.4   0.0     2   108     9   125     8   125 0.87 Glyoxalase-like domain
Glyoxalase           PF00903.20   128 sp|O07918|YRAH_BACSU -            128   1.1e-18   67.4   0.0   1   1   2.7e-22   1.3e-18   67.1   0.0     2   128     3   124     2   124 0.88 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily
Glyoxalase_4         PF13669.1    109 sp|O07918|YRAH_BACSU -            128   0.00014   21.8   0.0   1   1   4.8e-08   0.00024   21.1   0.0     2    98     5   102     4   114 0.71 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily
Abhydrolase_6        PF12697.2    228 sp|O07937|YRAK_BACSU -            271   1.3e-23   84.1   0.0   1   1   6.4e-27   1.6e-23   83.7   0.0     1   221    26   251    26   258 0.76 Alpha/beta hydrolase family
Abhydrolase_5        PF12695.2    145 sp|O07937|YRAK_BACSU -            271   9.2e-12   44.9   0.1   1   1   4.4e-15   1.1e-11   44.6   0.1     2    94    26   128    25   245 0.79 Alpha/beta hydrolase family
Abhydrolase_1        PF00561.15   230 sp|O07937|YRAK_BACSU -            271     4e-08   33.0   0.0   1   1   2.5e-11   6.3e-08   32.4   0.0     1    80    50   140    50   204 0.78 alpha/beta hydrolase fold
Hydrolase_4          PF12146.3     79 sp|O07937|YRAK_BACSU -            271     1e-06   28.5   1.3   1   1   4.1e-10     1e-06   28.5   1.3    18    73    25    80    13    86 0.77 Putative lysophospholipase
Thioesterase         PF00975.15   229 sp|O07937|YRAK_BACSU -            271     0.012   15.8   0.0   1   1     7e-06     0.017   15.3   0.0     3    85    26   110    24   261 0.88 Thioesterase domain
Patatin              PF01734.17   204 sp|O07937|YRAK_BACSU -            271     0.098   12.5   0.0   1   1   6.1e-05      0.15   11.9   0.0    23   126    87   214    76   249 0.74 Patatin-like phospholipase
PrpF                 PF04303.8    371 sp|O07931|YRAM_BACSU -            367  9.4e-172  570.8   1.7   1   1  2.1e-175  1.1e-171  570.6   1.7     1   371     1   361     1   361 0.99 PrpF protein
Pro_racemase         PF05544.6    325 sp|O07931|YRAM_BACSU -            367   4.7e-05   22.3   1.5   1   2   1.5e-06    0.0072   15.1   0.1    75   137    85   152    57   173 0.81 Proline racemase
PP2C_C               PF07830.8     81 sp|O07931|YRAM_BACSU -            367     0.066   13.3   0.0   1   1   2.5e-05      0.13   12.4   0.0    39    80    27    68    20    69 0.88 Protein serine/threonine phosphatase 2C, C-terminal domain
CitMHS               PF03600.11   351 sp|O05407|YRAO_BACSU -            438  3.7e-103  344.8  33.1   1   2  9.9e-107  3.7e-103  344.8  33.1     1   351     5   384     5   384 0.99 Citrate transporter
Na_H_antiporter      PF03553.9    303 sp|O05407|YRAO_BACSU -            438   3.3e-09   36.2  49.7   1   2     6e-09   2.2e-05   23.6  22.8   108   299     7   192     1   198 0.81 Na+/H+ antiporter family
Na_H_antiporter      PF03553.9    303 sp|O05407|YRAO_BACSU -            438   3.3e-09   36.2  49.7   2   2   8.6e-07    0.0032   16.5  22.3    59   302   200   433   175   434 0.76 Na+/H+ antiporter family
DctM                 PF06808.7    416 sp|O05407|YRAO_BACSU -            438     9e-06   24.4  22.5   2   3   8.3e-05      0.31    9.5  12.8   267   401    48   183    43   197 0.71 DctM-like transporters
DctM                 PF06808.7    416 sp|O05407|YRAO_BACSU -            438     9e-06   24.4  22.5   3   3   2.4e-09     9e-06   24.4  22.5   201   413   214   431   174   434 0.76 DctM-like transporters
DUF1212              PF06738.7    193 sp|O05407|YRAO_BACSU -            438   0.00018   21.0   3.4   2   3   4.9e-08   0.00018   21.0   3.4    98   192   231   327   223   328 0.87 Protein of unknown function (DUF1212)
Transcrip_reg        PF01709.15   234 sp|P94447|YRBC_BACSU -            240   1.4e-99  331.9   2.8   1   1  2.2e-103   1.6e-99  331.7   2.8     1   233     5   238     5   239 0.99 Transcriptional regulator
PIN                  PF01850.16   121 sp|P94447|YRBC_BACSU -            240     0.041   14.2   0.4   1   1     1e-05     0.078   13.3   0.4    21    80   165   235   154   240 0.89 PIN domain
Na_Ala_symp          PF01235.12   416 sp|O32060|YRBD_BACSU -            484  1.3e-157  524.6  27.6   1   1  2.3e-161  1.7e-157  524.2  27.6     3   414    42   462    38   464 0.93 Sodium:alanine symporter family
YbhQ                 PF11076.3    135 sp|O32060|YRBD_BACSU -            484       1.4    8.4   6.8   3   3   2.4e-05      0.17   11.4   1.2    44   126   368   452   351   456 0.81 Putative inner membrane protein YbhQ
GFO_IDH_MocA         PF01408.17   120 sp|O05389|YRBE_BACSU -            341   3.1e-30  105.1   0.1   1   1   3.9e-33   6.5e-30  104.1   0.1     3   120     7   124     5   124 0.97 Oxidoreductase family, NAD-binding Rossmann fold
GFO_IDH_MocA_C       PF02894.12   115 sp|O05389|YRBE_BACSU -            341   3.9e-12   45.9   0.0   1   1   4.2e-15   6.9e-12   45.1   0.0     1   113   136   242   136   244 0.81 Oxidoreductase family, C-terminal alpha/beta domain
Semialdhyde_dh       PF01118.19   121 sp|O05389|YRBE_BACSU -            341   3.2e-06   27.4   0.0   1   1   9.2e-09   1.5e-05   25.2   0.0     3    94     8    94     6    96 0.87 Semialdehyde dehydrogenase, NAD binding domain
F420_oxidored        PF03807.12    96 sp|O05389|YRBE_BACSU -            341   0.00046   20.5   0.0   1   1   7.9e-07    0.0013   19.1   0.0     3    86     8    91     6    95 0.88 NADP oxidoreductase coenzyme F420-dependent
NeuB                 PF03102.9    241 sp|O05389|YRBE_BACSU -            341    0.0038   16.3   0.1   1   1   3.6e-06     0.006   15.7   0.1    47   138    28   116    16   122 0.86 NeuB family
Gp_dh_N              PF00044.19   151 sp|O05389|YRBE_BACSU -            341    0.0079   16.1   0.0   1   1   1.3e-05     0.021   14.7   0.0     4    35     8    39     5    94 0.85 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain
NAD_binding_3        PF03447.11   117 sp|O05389|YRBE_BACSU -            341     0.021   15.1   0.0   1   1   2.6e-05     0.043   14.2   0.0     1   113    11   119    11   122 0.82 Homoserine dehydrogenase, NAD binding domain
DapB_N               PF01113.15   124 sp|O05389|YRBE_BACSU -            341     0.064   13.1   0.0   1   1   0.00013      0.21   11.5   0.0     4    70     8    67     5    97 0.68 Dihydrodipicolinate reductase, N-terminus
2-Hacid_dh_C         PF02826.14   178 sp|O05389|YRBE_BACSU -            341      0.11   11.5   0.1   1   2   0.00036      0.59    9.2   0.0    39    93     7    66     2    90 0.60 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain
YajC                 PF02699.10    83 sp|O32052|YRBF_BACSU -             89   1.8e-33  114.0   0.3   1   1   6.9e-37     2e-33  113.8   0.3     2    82     5    85     4    86 0.97 Preprotein translocase subunit
DUF912               PF06024.7    101 sp|O32052|YRBF_BACSU -             89     0.013   15.5   0.0   1   1     6e-06     0.018   15.1   0.0    65    95     2    32     1    42 0.80 Nucleopolyhedrovirus protein of unknown function (DUF912)
DUF4131              PF13567.1    176 sp|O32052|YRBF_BACSU -             89     0.016   14.6   0.0   1   1   6.1e-06     0.018   14.4   0.0    43    99     8    77     3    87 0.78 Domain of unknown function (DUF4131)
Chordopox_G3         PF06129.7    109 sp|O32052|YRBF_BACSU -             89     0.069   13.3   0.4   1   2   9.7e-05      0.29   11.3   0.1     6    38     9    41     5    49 0.87 Chordopoxvirus G3 protein
MS_channel           PF00924.13   206 sp|O32052|YRBF_BACSU -             89     0.076   12.3   0.3   1   1   3.5e-05       0.1   11.8   0.3    58    95    38    76    34    82 0.88 Mechanosensitive ion channel
DUF421               PF04239.7     99 sp|O32050|YRBG_BACSU -            218   7.2e-28   96.0   0.1   1   1   2.3e-31   1.1e-27   95.4   0.1     1    98    87   197    87   214 0.88 Protein of unknown function (DUF421)
DUF3397              PF11877.3    116 sp|O32050|YRBG_BACSU -            218     0.054   13.4   7.2   1   1   1.9e-05     0.092   12.7   7.2     7    82     7    84     3    89 0.74 Protein of unknown function (DUF3397)
DinB                 PF05163.7    169 sp|O07079|YRDA_BACSU -            167   4.2e-46  156.7   1.9   1   1   1.2e-49   4.5e-46  156.6   1.9     1   165     1   160     1   167 0.97 DinB family
DinB_2               PF12867.2    127 sp|O07079|YRDA_BACSU -            167   3.6e-10   40.2   1.6   1   1   1.4e-13   5.2e-10   39.7   1.6     7   127    17   135    12   135 0.84 DinB superfamily
MDMPI_N              PF11716.3    140 sp|O07079|YRDA_BACSU -            167     0.027   14.9   0.2   1   1   1.1e-05      0.04   14.3   0.2     4    49    15    60    12   127 0.69 Mycothiol maleylpyruvate isomerase N-terminal domain
Isochorismatase      PF00857.15   174 sp|O07081|YRDC_BACSU -            187   2.5e-31  108.9   0.1   1   1     4e-35     3e-31  108.6   0.1     2   174     6   178     5   178 0.97 Isochorismatase family
AAA_25               PF13481.1    194 sp|O07081|YRDC_BACSU -            187     0.031   13.6   0.0   1   1   6.7e-06      0.05   13.0   0.0   141   190     3    54     1    57 0.89 AAA domain
Barstar              PF01337.13    90 sp|O07938|YRDF_BACSU -             91   4.7e-27   93.6   0.6   1   1   3.7e-31   5.5e-27   93.4   0.6     2    85     5    85     4    89 0.96 Barstar (barnase inhibitor)
Tautomerase_2        PF14552.1     82 sp|P94502|YRDN_BACSU -            129   1.5e-28   98.6   0.0   1   1     3e-32   2.2e-28   98.0   0.0     1    82    38   118    38   118 0.99 Tautomerase enzyme
Tautomerase          PF01361.16    60 sp|P94502|YRDN_BACSU -            129   3.3e-17   61.8   0.0   1   2   5.8e-19   4.3e-15   55.0   0.0     1    59     2    60     2    61 0.97 Tautomerase enzyme
EamA                 PF00892.15   126 sp|O07086|YRDR_BACSU -            321   2.2e-29  102.0  44.2   1   3   1.1e-25   7.8e-22   77.6  10.3     1   126    18   146    18   146 0.98 EamA-like transporter family
EamA                 PF00892.15   126 sp|O07086|YRDR_BACSU -            321   2.2e-29  102.0  44.2   3   3   2.6e-12   1.9e-08   34.3  19.3     6   125   180   299   173   300 0.83 EamA-like transporter family
RseC_MucC            PF04246.7    135 sp|O07086|YRDR_BACSU -            321      0.18   11.3   0.1   4   4   2.5e-05      0.18   11.3   0.1    66   116   254   304   247   319 0.77 Positive regulator of sigma(E), RseC/MucC
Methyltransf_11      PF08241.7     95 sp|O05400|YRHH_BACSU -            180   1.5e-16   60.6   0.0   1   1   2.5e-19   2.2e-16   60.1   0.0     1    95    43   140    43   140 0.96 Methyltransferase domain
Methyltransf_25      PF13649.1    101 sp|O05400|YRHH_BACSU -            180   1.8e-08   34.6   0.0   1   1   3.1e-11   2.7e-08   34.0   0.0     1   101    42   136    42   136 0.90 Methyltransferase domain
Methyltransf_23      PF13489.1    161 sp|O05400|YRHH_BACSU -            180   4.1e-08   33.1   0.0   1   1   5.7e-11     5e-08   32.8   0.0    20   120    36   147    15   173 0.79 Methyltransferase domain
Methyltransf_31      PF13847.1    152 sp|O05400|YRHH_BACSU -            180   4.9e-08   32.7   0.0   1   1   6.8e-11   5.9e-08   32.4   0.0     2   109    37   141    36   173 0.90 Methyltransferase domain
Ubie_methyltran      PF01209.13   233 sp|O05400|YRHH_BACSU -            180   7.2e-08   31.8   0.1   1   1   9.9e-11   8.6e-08   31.5   0.1    39   151    30   140     9   159 0.83 ubiE/COQ5 methyltransferase family
Methyltransf_12      PF08242.7     99 sp|O05400|YRHH_BACSU -            180   5.6e-07   29.9   0.0   1   1   9.1e-10     8e-07   29.4   0.0     1    99    43   138    43   138 0.90 Methyltransferase domain
Methyltransf_18      PF12847.2    112 sp|O05400|YRHH_BACSU -            180   7.5e-05   23.2   0.0   1   1   1.2e-07    0.0001   22.8   0.0     2   110    39   141    38   143 0.81 Methyltransferase domain
RrnaAD               PF00398.15   262 sp|O05400|YRHH_BACSU -            180    0.0053   15.8   0.0   1   1   8.4e-06    0.0073   15.3   0.0    11    63    19    71    11   108 0.81 Ribosomal RNA adenine dimethylase
MTS                  PF05175.9    170 sp|O05400|YRHH_BACSU -            180    0.0058   16.0   0.0   1   1   8.7e-06    0.0076   15.6   0.0    22    88    29    94    16   176 0.80 Methyltransferase small domain
Fibrillarin          PF01269.12   229 sp|O05400|YRHH_BACSU -            180     0.019   13.8   0.0   1   1     4e-05     0.035   13.0   0.0    54   122    18    84     4    88 0.84 Fibrillarin
Methyltransf_8       PF05148.10   219 sp|O05400|YRHH_BACSU -            180     0.022   14.3   0.0   1   1   7.7e-05     0.067   12.8   0.0   114   157    97   141    22   176 0.82 Hypothetical methyltransferase
PCMT                 PF01135.14   210 sp|O05400|YRHH_BACSU -            180     0.024   14.1   0.0   1   1   4.9e-05     0.042   13.3   0.0    63   144    28   102    17   110 0.65 Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT)
N6_N4_Mtase          PF01555.13   231 sp|O05400|YRHH_BACSU -            180     0.027   13.9   0.2   2   2   0.00016      0.14   11.5   0.0    38    81   124   167   103   177 0.76 DNA methylase
MetW                 PF07021.7    193 sp|O05400|YRHH_BACSU -            180     0.034   13.5   0.0   1   1   6.1e-05     0.053   12.8   0.0    11   101    36   131    26   146 0.78 Methionine biosynthesis protein MetW
Methyltransf_26      PF13659.1    117 sp|O05400|YRHH_BACSU -            180     0.045   13.7   0.0   1   1   0.00021      0.18   11.8   0.0     2   114    40   141    39   144 0.81 Methyltransferase domain
Methyltransf_17      PF12692.2    160 sp|O05400|YRHH_BACSU -            180      0.08   12.6   0.0   1   1   0.00015      0.13   11.9   0.0    24    59    33    69    14   105 0.72 S-adenosyl-L-methionine methyltransferase
Methyltransf_2       PF00891.13   242 sp|O05400|YRHH_BACSU -            180     0.093   11.9   0.0   1   1   0.00012      0.11   11.7   0.0    67   189     6   133     2   162 0.80 O-methyltransferase
Form_Nir_trans       PF01226.12   250 sp|O05399|YRHG_BACSU -            266   1.7e-87  292.4  24.3   1   1   5.2e-91   1.9e-87  292.2  24.3     1   250     6   252     6   252 0.98 Formate/nitrite transporter
MASE1                PF05231.9    299 sp|O05399|YRHG_BACSU -            266     0.031   13.2  18.0   2   2   1.4e-05     0.051   12.5   3.5    81   179   165   262   154   265 0.73 MASE1
Yip1                 PF04893.12   172 sp|O05399|YRHG_BACSU -            266      0.13   11.7  31.6   1   2   3.6e-05      0.13   11.7  10.6     2   146     3   174     2   182 0.82 Yip1 domain
Acyl_transf_3        PF01757.17   340 sp|O05402|YRHL_BACSU -            634   5.6e-26   91.1  29.7   1   2   9.8e-28   2.1e-24   86.0  33.1     2   335    12   345    11   350 0.79 Acyltransferase family
Lipase_GDSL_2        PF13472.1    179 sp|O05402|YRHL_BACSU -            634   1.8e-06   28.2   0.2   1   1   4.1e-09   8.6e-06   25.9   0.2    59   177   531   622   486   624 0.71 GDSL-like Lipase/Acylhydrolase family
Lipase_GDSL          PF00657.17   234 sp|O05402|YRHL_BACSU -            634   0.00023   21.0   1.4   1   1   4.2e-05     0.088   12.6   1.4   166   231   571   625   485   628 0.65 GDSL-like Lipase/Acylhydrolase
DUF1510              PF07423.6    217 sp|O05402|YRHL_BACSU -            634    0.0016   17.8   3.5   1   1   1.3e-06    0.0027   17.1   3.5    17   108   386   474   369   490 0.42 Protein of unknown function (DUF1510)
Paramyxo_C           PF01692.13   204 sp|O05402|YRHL_BACSU -            634      0.09   12.3   5.8   1   1   6.9e-05      0.15   11.6   5.8    16   122   419   523   408   541 0.78 Paramyxovirus non-structural protein c
RRN3                 PF05327.6    564 sp|O05402|YRHL_BACSU -            634      0.28    9.2   3.8   1   1   0.00021      0.43    8.6   3.8   229   309   436   517   419   564 0.64 RNA polymerase I specific transcription initiation factor RRN3
Tim54                PF11711.3    382 sp|O05402|YRHL_BACSU -            634      0.45    9.0   4.5   1   1   0.00041      0.86    8.1   4.5   192   275   403   487   397   507 0.64 Inner membrane protein import complex subunit Tim54
LysE                 PF01810.13   191 sp|O05406|YRHP_BACSU -            210   1.8e-28   99.1  13.5   1   1   7.1e-32   2.1e-28   98.9  13.5     2   186    13   206    12   210 0.89 LysE type translocator
TerC                 PF03741.11   184 sp|O05406|YRHP_BACSU -            210    0.0018   17.7   9.0   1   2     1e-06    0.0031   16.9   7.3    11   105    19   119    10   174 0.72 Integral membrane protein TerC family
DUF485               PF04341.7     91 sp|O05406|YRHP_BACSU -            210     0.053   13.2   0.8   1   1   1.8e-05     0.053   13.2   0.8    17    62   157   205   140   207 0.84 Protein of unknown function, DUF485
DUF21                PF01595.15   183 sp|P54428|YRKA_BACSU -            434   5.9e-51  172.3   8.9   1   1   2.2e-54   8.3e-51  171.8   8.9     2   183     5   201     4   201 0.98 Domain of unknown function DUF21
CBS                  PF00571.23    57 sp|P54428|YRKA_BACSU -            434   1.7e-13   50.1   1.0   1   2   3.2e-08   0.00012   21.8   0.0     1    54   216   272   216   275 0.92 CBS domain
CBS                  PF00571.23    57 sp|P54428|YRKA_BACSU -            434   1.7e-13   50.1   1.0   2   2   1.1e-09   3.9e-06   26.5   0.4     8    56   292   340   286   341 0.93 CBS domain
CorC_HlyC            PF03471.12    81 sp|P54428|YRKA_BACSU -            434   2.3e-13   49.7   1.2   1   1   9.2e-17   3.4e-13   49.1   0.3     2    80   357   432   356   433 0.92 Transporter associated domain
TusA                 PF01206.12    70 sp|P54433|YRKF_BACSU -            185   1.2e-24   85.6   0.0   1   2   6.1e-26     3e-22   77.9   0.0     1    70     6    75     6    75 0.96 Sulfurtransferase TusA
Rhodanese            PF00581.15   113 sp|P54433|YRKF_BACSU -            185   1.4e-18   67.2   0.0   1   1   4.3e-22   2.1e-18   66.6   0.0     3   111    93   181    91   183 0.95 Rhodanese-like domain
DUF2249              PF10006.4     69 sp|P54433|YRKF_BACSU -            185    0.0027   17.2   0.0   1   2   7.1e-06     0.035   13.6   0.0     1    33     7    39     7    42 0.95 Uncharacterized conserved protein (DUF2249)
TusA                 PF01206.12    70 sp|P54436|YRKI_BACSU -             75   3.5e-24   84.1   0.0   1   1   7.9e-28   3.9e-24   84.0   0.0     1    70     5    74     5    74 0.98 Sulfurtransferase TusA
DUF2249              PF10006.4     69 sp|P54436|YRKI_BACSU -             75    0.0012   18.4   0.0   1   2   4.6e-07    0.0023   17.4   0.0     1    33     6    38     6    41 0.95 Uncharacterized conserved protein (DUF2249)
DUF3148              PF11347.3     63 sp|P54436|YRKI_BACSU -             75     0.046   13.3   0.0   1   2   5.2e-05      0.26   10.9   0.0    18    45    13    40    11    43 0.92 Protein of unknown function (DUF3148)
TauE                 PF01925.14   240 sp|P54437|YRKJ_BACSU -            261   1.8e-40  138.9  36.4   1   1   5.6e-44   2.1e-40  138.7  36.4     1   240     9   256     9   256 0.90 Sulfite exporter TauE/SafE
Flavodoxin_2         PF02525.12   199 sp|P54439|YRKL_BACSU -            174     5e-44  150.1   0.0   1   1   8.3e-48   6.2e-44  149.9   0.0     1   196     1   167     1   171 0.91 Flavodoxin-like fold
FMN_red              PF03358.10   152 sp|P54439|YRKL_BACSU -            174    0.0091   15.5   0.0   1   1   1.7e-06     0.012   15.0   0.0    60   107    46    99     8   117 0.75 NADPH-dependent FMN reductase
YodA                 PF09223.6    182 sp|O05410|YRPE_BACSU -            251   1.1e-88  295.6  13.6   1   1   7.5e-92   1.6e-88  295.1  13.6     2   182    72   251    71   251 0.99 YodA lipocalin-like domain
DUF4097              PF13349.1    166 sp|O05410|YRPE_BACSU -            251   0.00028   20.4   0.8   2   2   0.00014       0.3   10.6   0.1    34    89   122   176   101   208 0.70 Domain of unknown function (DUF4097)
SelP_N               PF04592.9    238 sp|O05410|YRPE_BACSU -            251     0.014   14.7   3.0   1   1   1.1e-05     0.023   14.0   3.0   169   214    29    74     9    89 0.63 Selenoprotein P, N terminal region
Spore_YhcN_YlaJ      PF09580.5    177 sp|O05410|YRPE_BACSU -            251     0.041   13.9   0.8   1   1     3e-05     0.064   13.3   0.8     3    74    17    74    15    89 0.54 Sporulation lipoprotein YhcN/YlaJ (Spore_YhcN_YlaJ)
DUF2946              PF11162.3    122 sp|O05410|YRPE_BACSU -            251     0.052   13.7   0.6   1   1   3.8e-05      0.08   13.1   0.6     3    64     8    70     6    75 0.72 Protein of unknown function (DUF2946)
Zip                  PF02535.17   317 sp|O05410|YRPE_BACSU -            251     0.071   12.0   4.2   1   1   4.5e-05     0.095   11.6   4.2   111   160    25    74     5    86 0.81 ZIP Zinc transporter
DUF2611              PF11022.3     71 sp|O05410|YRPE_BACSU -            251      0.11   12.5   1.4   1   1   0.00016      0.33   11.0   1.4    16    67     8    60     5    89 0.83 Protein of unknown function (DUF2611)
Aldo_ket_red         PF00248.16   283 sp|O05408|YRPG_BACSU -            326   3.1e-70  236.2   0.0   1   1   2.4e-74   3.5e-70  236.0   0.0     1   282    15   313    15   314 0.95 Aldo/keto reductase family
UPF0118              PF01594.11   327 sp|O34472|YRRI_BACSU -            353   5.6e-85  285.1  35.7   1   1   4.6e-89   6.8e-85  284.9  35.7     2   325    20   345     9   347 0.94 Domain of unknown function DUF20
YceG                 PF02618.11   297 sp|O34758|YRRL_BACSU -            360   5.6e-98  327.6   5.2   1   1  1.3e-101   6.6e-98  327.3   5.2     1   297    50   353    50   353 0.95 YceG-like family
Methyltransf_3       PF01596.12   205 sp|O32036|YRRM_BACSU -            217   1.2e-29  102.8   0.0   1   1   1.7e-32   1.4e-29  102.6   0.0    26   204    37   215    17   216 0.87 O-methyltransferase
Methyltransf_24      PF13578.1    106 sp|O32036|YRRM_BACSU -            217     6e-14   52.7   0.0   1   1   1.2e-16   9.9e-14   52.0   0.0     1   106    59   161    59   161 0.92 Methyltransferase domain
Methyltransf_18      PF12847.2    112 sp|O32036|YRRM_BACSU -            217   4.5e-12   46.5   0.0   1   1   1.1e-14   9.4e-12   45.5   0.0     2   109    55   158    54   161 0.90 Methyltransferase domain
PCMT                 PF01135.14   210 sp|O32036|YRRM_BACSU -            217   7.7e-10   38.6   0.0   1   1   1.5e-12   1.3e-09   37.9   0.0    63   152    44   136    19   142 0.87 Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT)
Methyltransf_31      PF13847.1    152 sp|O32036|YRRM_BACSU -            217   1.5e-09   37.6   0.0   1   1   2.2e-12   1.9e-09   37.3   0.0     2   111    53   161    52   196 0.87 Methyltransferase domain
MTS                  PF05175.9    170 sp|O32036|YRRM_BACSU -            217   3.2e-07   29.8   0.0   1   1   5.6e-10   4.6e-07   29.3   0.0    18   103    41   131    39   144 0.89 Methyltransferase small domain
Methyltransf_26      PF13659.1    117 sp|O32036|YRRM_BACSU -            217   1.7e-05   24.8   0.0   1   1   3.3e-08   2.7e-05   24.1   0.0     2   111    56   156    55   158 0.85 Methyltransferase domain
CMAS                 PF02353.15   273 sp|O32036|YRRM_BACSU -            217   1.7e-05   24.0   0.0   1   1   2.7e-08   2.2e-05   23.6   0.0    50   167    42   161    27   180 0.84 Mycolic acid cyclopropane synthetase
GCD14                PF08704.5    247 sp|O32036|YRRM_BACSU -            217   2.8e-05   23.7   0.0   1   1   4.1e-08   3.4e-05   23.4   0.0    17   121    31   134    14   157 0.87 tRNA methyltransferase complex GCD14 subunit
Methyltransf_15      PF09445.5    164 sp|O32036|YRRM_BACSU -            217   4.5e-05   23.0   0.0   1   1   8.5e-08     7e-05   22.4   0.0    11    79    65   135    56   147 0.87 RNA cap guanine-N2 methyltransferase
CmcI                 PF04989.7    206 sp|O32036|YRRM_BACSU -            217   7.3e-05   22.1   0.1   1   1   1.2e-07   9.9e-05   21.7   0.1    24   148    46   160    34   205 0.67 Cephalosporin hydroxylase
Methyltransf_4       PF02390.12   197 sp|O32036|YRRM_BACSU -            217   8.4e-05   21.6   0.0   1   1   3.1e-07   0.00026   20.1   0.0    22    83    57   119    42   132 0.86 Putative methyltransferase
GidB                 PF02527.10   184 sp|O32036|YRRM_BACSU -            217   0.00017   20.8   0.0   1   1   2.6e-07   0.00021   20.4   0.0    26   145    33   157     4   200 0.76 rRNA small subunit methyltransferase G
Spermine_synth       PF01564.12   246 sp|O32036|YRRM_BACSU -            217    0.0027   16.6   0.1   1   1   4.8e-06    0.0039   16.1   0.1    76   213    54   185    31   206 0.71 Spermine/spermidine synthase
DUF938               PF06080.7    204 sp|O32036|YRRM_BACSU -            217    0.0093   15.5   0.0   1   1   1.3e-05     0.011   15.3   0.0    15    75    43   104    24   157 0.80 Protein of unknown function (DUF938)
Cons_hypoth95        PF03602.10   183 sp|O32036|YRRM_BACSU -            217     0.011   15.1   0.0   1   1   1.8e-05     0.015   14.6   0.0    67   151    80   158    73   179 0.83 Conserved hypothetical protein 95
Met_10               PF02475.11   200 sp|O32036|YRRM_BACSU -            217     0.023   14.2   0.0   1   1   3.5e-05     0.029   13.9   0.0   100   185    53   204    41   217 0.84 Met-10+ like-protein
Methyltransf_23      PF13489.1    161 sp|O32036|YRRM_BACSU -            217     0.023   14.4   0.0   1   1   5.1e-05     0.042   13.5   0.0    15    83    48   131     2   161 0.65 Methyltransferase domain
Peptidase_U32        PF01136.14   233 sp|O32035|YRRN_BACSU -            309   6.6e-63  211.7   0.1   1   1   5.8e-67   8.6e-63  211.3   0.1     3   230    76   306    74   308 0.95 Peptidase family U32
Peptidase_U32        PF01136.14   233 sp|O32034|YRRO_BACSU -            422   1.8e-82  275.7   0.1   1   1   3.5e-86   2.6e-82  275.2   0.1     1   232    93   324    93   325 0.96 Peptidase family U32
Radical_SAM          PF04055.16   166 sp|O32034|YRRO_BACSU -            422   0.00074   19.7   0.4   1   3   5.8e-05      0.43   10.7   0.0    90   165    19   102     4   103 0.75 Radical SAM superfamily
Methyltransf_23      PF13489.1    161 sp|O32029|YRRT_BACSU -            213   1.4e-11   44.3   0.0   1   1   1.7e-14   1.9e-11   43.9   0.0     7   158    32   196    24   199 0.70 Methyltransferase domain
Methyltransf_11      PF08241.7     95 sp|O32029|YRRT_BACSU -            213   2.6e-10   40.6   0.0   1   1   7.2e-13   8.3e-10   39.0   0.0     1    79    50   128    50   144 0.90 Methyltransferase domain
Methyltransf_18      PF12847.2    112 sp|O32029|YRRT_BACSU -            213   4.4e-10   40.1   0.0   1   1   7.2e-13   8.2e-10   39.2   0.0     2   102    46   137    45   169 0.86 Methyltransferase domain
Methyltransf_12      PF08242.7     99 sp|O32029|YRRT_BACSU -            213   2.1e-09   37.7   0.0   1   1   5.1e-12   5.8e-09   36.3   0.0     1    93    50   136    50   138 0.88 Methyltransferase domain
RrnaAD               PF00398.15   262 sp|O32029|YRRT_BACSU -            213   5.3e-09   35.4   0.0   1   1   6.3e-12   7.2e-09   35.0   0.0    19    92    34   105    27   145 0.90 Ribosomal RNA adenine dimethylase
Methyltransf_26      PF13659.1    117 sp|O32029|YRRT_BACSU -            213   4.7e-08   33.0   0.0   1   1   6.1e-11     7e-08   32.5   0.0     1   108    46   165    46   173 0.76 Methyltransferase domain
Methyltransf_25      PF13649.1    101 sp|O32029|YRRT_BACSU -            213     3e-07   30.7   0.0   1   1   2.9e-09   3.3e-06   27.3   0.0     1    96    49   135    49   139 0.91 Methyltransferase domain
Methyltransf_31      PF13847.1    152 sp|O32029|YRRT_BACSU -            213     2e-05   24.2   0.0   1   1   2.3e-08   2.6e-05   23.8   0.0     2   119    44   156    43   203 0.79 Methyltransferase domain
Ubie_methyltran      PF01209.13   233 sp|O32029|YRRT_BACSU -            213   0.00017   20.7   0.0   1   1     1e-06    0.0012   18.0   0.0    12   143     8   136     4   205 0.72 ubiE/COQ5 methyltransferase family
CMAS                 PF02353.15   273 sp|O32029|YRRT_BACSU -            213   0.00023   20.3   0.0   1   1   3.2e-07   0.00036   19.6   0.0    50   170    33   157     2   200 0.79 Mycolic acid cyclopropane synthetase
Methyltransf_28      PF02636.12   252 sp|O32029|YRRT_BACSU -            213   0.00047   19.6   0.0   1   1   5.6e-07   0.00064   19.1   0.0    15    74    43    91    34   158 0.82 Putative S-adenosyl-L-methionine-dependent methyltransferase
DUF2383              PF09537.5    111 sp|O32029|YRRT_BACSU -            213     0.013   15.7   0.2   1   1   2.5e-05     0.029   14.6   0.2    16    58   151   193   144   199 0.91 Domain of unknown function (DUF2383)
MTS                  PF05175.9    170 sp|O32029|YRRT_BACSU -            213      0.12   11.7   0.0   1   1   0.00022      0.25   10.6   0.0    23   114    37   123    30   162 0.75 Methyltransferase small domain
SH3_3                PF08239.6     55 sp|O32041|YRVJ_BACSU -            518   6.6e-51  170.3  14.1   1   4   3.7e-14   9.2e-11   41.7   0.8     4    54    40    88    36    89 0.94 Bacterial SH3 domain
SH3_3                PF08239.6     55 sp|O32041|YRVJ_BACSU -            518   6.6e-51  170.3  14.1   2   4   5.1e-17   1.3e-13   50.9   0.1     2    55   111   161   110   161 0.96 Bacterial SH3 domain
SH3_3                PF08239.6     55 sp|O32041|YRVJ_BACSU -            518   6.6e-51  170.3  14.1   3   4   2.2e-16   5.4e-13   48.9   0.0     1    54   189   239   189   240 0.98 Bacterial SH3 domain
SH3_3                PF08239.6     55 sp|O32041|YRVJ_BACSU -            518   6.6e-51  170.3  14.1   4   4   3.2e-12   7.9e-09   35.5   1.0     1    53   266   316   266   318 0.95 Bacterial SH3 domain
Amidase_3            PF01520.13   175 sp|O32041|YRVJ_BACSU -            518   1.8e-44  151.6   0.0   1   1   1.1e-47   2.7e-44  151.0   0.0     1   174   346   514   346   515 0.98 N-acetylmuramoyl-L-alanine amidase
SH3_4                PF06347.8     55 sp|O32041|YRVJ_BACSU -            518   1.1e-35  120.9   2.1   1   4     2e-13   4.9e-10   38.7   0.2     2    50    36    85    35    90 0.94 Bacterial SH3 domain
SH3_4                PF06347.8     55 sp|O32041|YRVJ_BACSU -            518   1.1e-35  120.9   2.1   2   4   3.2e-09   7.9e-06   25.3   0.0     3    51   110   158   108   162 0.93 Bacterial SH3 domain
SH3_4                PF06347.8     55 sp|O32041|YRVJ_BACSU -            518   1.1e-35  120.9   2.1   3   4   1.2e-11   2.9e-08   33.1   0.0     4    50   190   236   187   239 0.94 Bacterial SH3 domain
SH3_4                PF06347.8     55 sp|O32041|YRVJ_BACSU -            518   1.1e-35  120.9   2.1   4   4   1.1e-07   0.00028   20.3   0.0     4    49   267   313   265   316 0.95 Bacterial SH3 domain
MgsA_C               PF12002.3    168 sp|O34528|YRVN_BACSU -            421   5.4e-69  231.1   0.1   1   1   1.6e-71   9.8e-69  230.3   0.1     1   167   252   418   252   419 0.98 MgsA AAA+ ATPase C terminal
RuvB_N               PF05496.7    234 sp|O34528|YRVN_BACSU -            421   2.1e-15   56.4   0.4   1   1   6.5e-18   3.9e-15   55.5   0.3    16   136     6   124     2   136 0.84 Holliday junction DNA helicase ruvB N-terminus
AAA                  PF00004.24   132 sp|O34528|YRVN_BACSU -            421   4.2e-14   52.8   0.0   1   1   1.7e-16     1e-13   51.6   0.0     1   126    41   143    41   148 0.90 ATPase family associated with various cellular activities (AAA)
AAA_14               PF13173.1    128 sp|O34528|YRVN_BACSU -            421   1.3e-06   28.3   0.0   1   1   6.3e-09   3.7e-06   26.8   0.0     5   123    41   150    39   152 0.79 AAA domain
Rad17                PF03215.10   519 sp|O34528|YRVN_BACSU -            421   9.7e-06   24.5   0.0   2   2     2e-07   0.00012   20.9   0.0   205   277   141   208   133   257 0.78 Rad17 cell cycle checkpoint protein
AAA_22               PF13401.1    131 sp|O34528|YRVN_BACSU -            421   2.8e-05   24.2   2.1   1   2   0.00022      0.13   12.3   0.1     5    25    39    59    34    73 0.86 AAA domain
AAA_22               PF13401.1    131 sp|O34528|YRVN_BACSU -            421   2.8e-05   24.2   2.1   2   2    0.0009      0.53   10.4   0.1    71   108    74   114    64   130 0.73 AAA domain
AAA_5                PF07728.9    139 sp|O34528|YRVN_BACSU -            421   3.6e-05   23.5   0.1   1   1   1.8e-05     0.011   15.5   0.1     2    92    41   117    40   160 0.70 AAA domain (dynein-related subfamily)
Sigma54_activat      PF00158.21   168 sp|O34528|YRVN_BACSU -            421     4e-05   23.1   0.2   2   2   3.7e-05     0.022   14.2   0.0    94   131    91   128    83   137 0.88 Sigma-54 interaction domain
TIP49                PF06068.8    398 sp|O34528|YRVN_BACSU -            421   5.5e-05   22.0   1.4   1   2   5.9e-07   0.00035   19.4   0.5    24    85    14    71     6    92 0.84 TIP49 C-terminus
AAA_16               PF13191.1    185 sp|O34528|YRVN_BACSU -            421   6.8e-05   22.9   2.9   1   2   3.6e-05     0.021   14.7   0.0    21    45    35    59    26    72 0.85 AAA ATPase domain
DNA_pol3_delta2      PF13177.1    162 sp|O34528|YRVN_BACSU -            421   7.4e-05   22.4   0.0   2   2   1.9e-05     0.011   15.3   0.0    93   161    81   149    67   150 0.77 DNA polymerase III, delta subunit
IstB_IS21            PF01695.12   178 sp|O34528|YRVN_BACSU -            421   0.00048   19.5   0.0   1   1   1.9e-06    0.0011   18.3   0.0    48   116    39    98     8   115 0.67 IstB-like ATP binding protein
Mg_chelatase         PF01078.16   207 sp|O34528|YRVN_BACSU -            421   0.00083   18.5   0.3   1   2   0.00016     0.095   11.8   0.2    19    43    35    59    12    64 0.68 Magnesium chelatase, subunit ChlI
AAA_25               PF13481.1    194 sp|O34528|YRVN_BACSU -            421    0.0011   18.4   0.0   1   1   4.2e-06    0.0025   17.2   0.0    21    58    24    63     5   105 0.83 AAA domain
Sigma54_activ_2      PF14532.1    138 sp|O34528|YRVN_BACSU -            421    0.0024   17.9   0.0   1   1   7.8e-06    0.0047   16.9   0.0    19    96    36   117    27   157 0.76 Sigma-54 interaction domain
AAA_24               PF13479.1    213 sp|O34528|YRVN_BACSU -            421    0.0027   17.3   0.8   1   1   9.8e-06    0.0058   16.2   0.4     5    25    40    61    36    66 0.84 AAA domain
NB-ARC               PF00931.17   287 sp|O34528|YRVN_BACSU -            421    0.0039   16.0   0.1   1   1   1.1e-05    0.0065   15.3   0.1     6    45    26    64    23   108 0.84 NB-ARC domain
AAA_17               PF13207.1    121 sp|O34528|YRVN_BACSU -            421    0.0061   17.3   0.2   1   1   3.9e-05     0.023   15.4   0.2     3    40    42    80    41   237 0.66 AAA domain
AAA_18               PF13238.1    129 sp|O34528|YRVN_BACSU -            421     0.019   15.2   0.0   1   1     8e-05     0.047   13.9   0.0     2    62    42   113    42   128 0.70 AAA domain
RNA_helicase         PF00910.17   107 sp|O34528|YRVN_BACSU -            421     0.025   14.7   0.0   1   1   7.7e-05     0.046   13.9   0.0     2    64    42   105    41   130 0.77 RNA helicase
ABC_tran             PF00005.22   137 sp|O34528|YRVN_BACSU -            421      0.12   12.6   0.0   1   1   0.00053      0.31   11.3   0.0    12    61    39    93    32   163 0.76 ABC transporter
DUF1292              PF06949.6     76 sp|O34828|YRZB_BACSU -             93   4.4e-27   94.2   7.0   1   1   7.7e-31   5.7e-27   93.8   7.0     1    76    13    89    13    89 0.94 Protein of unknown function (DUF1292)
APH                  PF01636.18   239 sp|O32057|YRZF_BACSU -            215   1.1e-06   28.5   0.0   1   2   1.9e-08   5.7e-05   22.9   0.0     2   102    30   123    29   130 0.87 Phosphotransferase enzyme family
WaaY                 PF06176.6    229 sp|O32057|YRZF_BACSU -            215   0.00063   19.0   0.0   1   1   4.5e-07    0.0013   17.9   0.0   120   188    91   164    82   184 0.80 Lipopolysaccharide core biosynthesis protein (WaaY)
Pkinase              PF00069.20   260 sp|O32057|YRZF_BACSU -            215   0.00091   18.4   0.0   1   1   4.1e-07    0.0012   18.0   0.0     4   141    30   153    27   174 0.84 Protein kinase domain
Kdo                  PF06293.9    206 sp|O32057|YRZF_BACSU -            215     0.014   14.4   0.0   1   1     8e-06     0.024   13.7   0.0    92   178    89   167    84   185 0.90 Lipopolysaccharide kinase (Kdo/WaaP) family
Pterin_bind          PF00809.17   210 sp|O32057|YRZF_BACSU -            215     0.093   12.0   0.0   1   1   4.3e-05      0.13   11.6   0.0   112   168    83   138    62   157 0.87 Pterin binding enzyme
DUF965               PF06135.7     79 sp|Q7WY61|YRZL_BACSU -             88   1.9e-42  143.1   0.1   1   1   1.4e-46   2.1e-42  143.0   0.1     1    79     4    83     4    83 0.97 Bacterial protein of unknown function (DUF965)
HAD_2                PF13419.1    176 sp|P94512|YSAA_BACSU -            260     1e-23   84.4   0.0   1   1   5.2e-27   1.3e-23   84.1   0.0     1   176     4   231     4   231 0.84 Haloacid dehalogenase-like hydrolase
Hydrolase_like       PF13242.1     75 sp|P94512|YSAA_BACSU -            260   7.8e-15   54.3   0.0   1   1   8.6e-18   2.1e-14   52.9   0.0     3    75   186   254   184   254 0.90 HAD-hyrolase-like
Hydrolase            PF00702.21   215 sp|P94512|YSAA_BACSU -            260     3e-14   53.9   0.0   1   1   2.1e-17   5.2e-14   53.1   0.0     1   215     1   225     1   225 0.73 haloacid dehalogenase-like hydrolase
Hydrolase_3          PF08282.7    254 sp|P94512|YSAA_BACSU -            260    0.0054   16.3   0.2   1   2   0.00038      0.94    9.0   0.0     1    30     4    33     4    36 0.90 haloacid dehalogenase-like hydrolase
PGP_phosphatase      PF09419.5    168 sp|P94512|YSAA_BACSU -            260    0.0056   16.0   0.0   2   2   1.2e-05     0.029   13.7   0.0   132   164   201   232   133   235 0.85 Mitochondrial PGP phosphatase
HAD                  PF12710.2    192 sp|P94512|YSAA_BACSU -            260    0.0074   16.4   0.0   1   1   6.8e-06     0.017   15.3   0.0     1   187     4   217     4   221 0.51 haloacid dehalogenase-like hydrolase
Peptidase_M42        PF05343.9    292 sp|P94521|YSDC_BACSU -            361    4e-118  393.4   2.2   1   1  1.3e-121  4.7e-118  393.2   2.2     1   292    48   342    48   342 0.99 M42 glutamyl aminopeptidase
Peptidase_M20        PF01546.23   189 sp|P94521|YSDC_BACSU -            361   3.3e-09   36.5   0.3   1   1   1.6e-12     6e-09   35.6   0.3    35   188   181   348   179   349 0.80 Peptidase family M20/M25/M40
Peptidase_M28        PF04389.12   179 sp|P94521|YSDC_BACSU -            361   3.4e-05   23.6   0.1   2   2   4.6e-08   0.00017   21.3   0.0    24   166   180   327   173   340 0.70 Peptidase family M28
Diacid_rec           PF05651.8    135 sp|P94536|YSFB_BACSU -            368   1.3e-47  160.6   0.0   1   1   5.4e-51     2e-47  160.0   0.0     1   135     3   137     3   137 0.99 Putative sugar diacid recognition
HTH_30               PF13556.1     59 sp|P94536|YSFB_BACSU -            368     2e-19   68.9   2.2   2   2   1.9e-22   6.9e-19   67.1   1.3     1    57   304   360   304   362 0.98 PucR C-terminal helix-turn-helix domain
Sigma70_r4_2         PF08281.7     54 sp|P94536|YSFB_BACSU -            368    0.0052   16.2   0.0   1   1   4.3e-06     0.016   14.6   0.0    25    51   314   340   312   342 0.93 Sigma-70, region 4
GAF_2                PF13185.1    148 sp|P94536|YSFB_BACSU -            368     0.027   14.9   0.0   1   2   6.1e-05      0.23   11.9   0.0    69   127    44   100    22   112 0.72 GAF domain
SpoU_methylase       PF00588.14   142 sp|P94538|YSGA_BACSU -            248   9.6e-36  122.7   0.0   1   1   3.2e-39   1.6e-35  122.0   0.0     3   142   106   244   104   244 0.96 SpoU rRNA Methylase family
SpoU_sub_bind        PF08032.7     76 sp|P94538|YSGA_BACSU -            248   1.1e-13   51.1   0.0   1   2   1.1e-16   5.3e-13   48.9   0.0     1    75    31    98    31    99 0.91 RNA 2'-O ribose methyltransferase substrate binding
GxDLY                PF14607.1    147 sp|P94538|YSGA_BACSU -            248     0.079   12.4   0.0   2   2   0.00013      0.65    9.4   0.0   118   142   208   239   169   242 0.66 N-terminus of Esterase_SGNH_hydro-type
DUF350               PF03994.9     54 sp|P94546|YSHE_BACSU -            134     5e-36  122.2   5.7   1   2   8.9e-20   2.2e-16   59.3   0.7     1    54    15    68    15    68 0.97 Domain of Unknown Function (DUF350)
DUF350               PF03994.9     54 sp|P94546|YSHE_BACSU -            134     5e-36  122.2   5.7   2   2   7.9e-22   1.9e-18   65.8   0.4     1    54    80   134    80   134 0.99 Domain of Unknown Function (DUF350)
YqhR                 PF11085.3    174 sp|P94546|YSHE_BACSU -            134    0.0051   16.3   3.4   1   1   4.7e-06     0.012   15.2   3.4    59   134    35   113     9   131 0.81 Conserved membrane protein YqhR
ABC2_membrane_5      PF13346.1    206 sp|P94546|YSHE_BACSU -            134    0.0085   15.4   3.5   1   2   3.4e-06    0.0085   15.4   3.5   114   200    11    94     2    98 0.73 ABC-2 family transporter protein
DUF3661              PF12400.3    129 sp|P94546|YSHE_BACSU -            134      0.03   14.4   1.6   1   1   1.6e-05      0.04   14.0   1.6    11    82    15   100     5   109 0.83 Vaculolar membrane protein
Metallophos_2        PF12850.2    156 sp|P94559|YSNB_BACSU -            169   6.5e-32  110.5   0.1   1   1   1.5e-35   7.6e-32  110.3   0.1     1   155     1   145     1   146 0.93 Calcineurin-like phosphoesterase superfamily domain
Metallophos          PF00149.23   200 sp|P94559|YSNB_BACSU -            169   2.9e-09   36.6   1.4   1   2     9e-06     0.044   13.1   0.0     1    40     1    35     1    36 0.96 Calcineurin-like phosphoesterase
Metallophos          PF00149.23   200 sp|P94559|YSNB_BACSU -            169   2.9e-09   36.6   1.4   2   2   4.3e-08   0.00021   20.7   1.0   139   199    60   110    38   111 0.90 Calcineurin-like phosphoesterase
UPF0552              PF10574.4    224 sp|P94559|YSNB_BACSU -            169     0.066   12.6   0.0   2   2   3.3e-05      0.17   11.3   0.0    54    82   133   161   106   168 0.83 Uncharacterised protein family UPF0552
Acetyltransf_1       PF00583.19    83 sp|P94562|YSNE_BACSU -            151   2.2e-15   56.4   0.1   1   1   1.4e-18   2.9e-15   56.0   0.1     1    83    51   130    51   130 0.93 Acetyltransferase (GNAT) family
Acetyltransf_10      PF13673.1    117 sp|P94562|YSNE_BACSU -            151   1.1e-09   38.4   0.0   1   1   6.4e-13   1.3e-09   38.1   0.0     5   117    13   129    10   129 0.81 Acetyltransferase (GNAT) domain
Acetyltransf_7       PF13508.1     79 sp|P94562|YSNE_BACSU -            151   3.8e-07   30.1   0.0   1   1   2.5e-10   5.3e-07   29.7   0.0     4    78    47   130    44   131 0.79 Acetyltransferase (GNAT) domain
FR47                 PF08445.5     86 sp|P94562|YSNE_BACSU -            151   1.4e-05   24.7   0.0   1   1   1.3e-08   2.7e-05   23.8   0.0    19    79    68   131    57   135 0.86 FR47-like protein
Acetyltransf_9       PF13527.1    127 sp|P94562|YSNE_BACSU -            151    0.0013   18.6   0.0   1   1   1.3e-06    0.0027   17.5   0.0    44   127    49   132    17   132 0.80 Acetyltransferase (GNAT) domain
Acetyltransf_8       PF13523.1    152 sp|P94562|YSNE_BACSU -            151    0.0092   15.8   0.0   1   1   6.1e-06     0.013   15.3   0.0    88   143    80   136    55   142 0.89 Acetyltransferase (GNAT) domain
Acetyltransf_4       PF13420.1    155 sp|P94562|YSNE_BACSU -            151     0.012   15.5   0.0   1   1   7.3e-06     0.016   15.1   0.0    53   140    48   135    30   145 0.79 Acetyltransferase (GNAT) domain
RadC                 PF04002.10   123 sp|Q02170|YSXA_BACSU -            231   1.7e-45  153.6   0.0   1   1   1.3e-48   2.3e-45  153.2   0.0     2   123   110   231   109   231 0.98 RadC-like JAB domain
HHH                  PF00633.18    30 sp|Q02170|YSXA_BACSU -            231   7.4e-07   28.5   0.3   1   2   1.7e-09   3.2e-06   26.5   0.2     5    29    67    91    63    92 0.92 Helix-hairpin-helix motif
HHH_2                PF12826.2     64 sp|Q02170|YSXA_BACSU -            231   6.3e-05   22.7   0.0   1   1   6.6e-08   0.00012   21.8   0.0    16    52    54    90    52    95 0.91 Helix-hairpin-helix motif
Prok-JAB             PF14464.1    105 sp|Q02170|YSXA_BACSU -            231    0.0025   17.3   0.0   1   1   1.9e-06    0.0036   16.8   0.0    47    87   162   201    97   226 0.70 Prokaryotic homologs of the JAB domain
Toxin-JAB1           PF15659.1    162 sp|Q02170|YSXA_BACSU -            231    0.0067   16.3   0.0   1   1   5.5e-06      0.01   15.7   0.0   111   140   169   198   139   207 0.78 JAB-like toxin  1
HHH_3                PF12836.2     65 sp|Q02170|YSXA_BACSU -            231     0.012   15.5   0.3   1   1   2.3e-05     0.042   13.7   0.0    11    35    70    94    67   102 0.88 Helix-hairpin-helix motif
Transposase_20       PF02371.11    87 sp|Q02170|YSXA_BACSU -            231      0.02   14.9   0.0   1   1   3.5e-05     0.065   13.3   0.0     2    28    73    99    72   109 0.84 Transposase IS116/IS110/IS902 family
HHH_5                PF14520.1     60 sp|Q02170|YSXA_BACSU -            231      0.03   14.4   0.1   1   1     4e-05     0.075   13.2   0.1    20    57    56    92    51    94 0.81 Helix-hairpin-helix domain
ACT                  PF01842.20    66 sp|P21204|YSZB_BACSU -            147   9.7e-09   34.5   0.3   1   1   9.6e-12   2.4e-08   33.2   0.0     2    64    70   134    69   136 0.95 ACT domain
ACT_4                PF13291.1     80 sp|P21204|YSZB_BACSU -            147   4.6e-06   26.8   0.1   1   1     3e-09   7.3e-06   26.2   0.1    10    79    72   141    65   141 0.89 ACT domain
ACT_6                PF13740.1     76 sp|P21204|YSZB_BACSU -            147   0.00033   20.3   0.1   1   1   2.6e-07   0.00064   19.3   0.1    10    64    76   133    76   137 0.82 ACT domain
DUF2129              PF09902.4     71 sp|P21204|YSZB_BACSU -            147     0.058   13.1   0.2   1   1     7e-05      0.17   11.6   0.0    39    60   121   142   119   144 0.92 Uncharacterized protein conserved in bacteria (DUF2129)
URO-D                PF01208.12   343 sp|P21204|YSZB_BACSU -            147     0.069   12.0   0.0   1   1   3.4e-05     0.083   11.7   0.0   171   273    12   110     5   133 0.77 Uroporphyrinogen decarboxylase (URO-D)
GSIII_N              PF12437.3    165 sp|P21204|YSZB_BACSU -            147     0.077   12.3   0.0   1   1   3.9e-05     0.098   12.0   0.0    28    71    17    61     7    95 0.77 Glutamine synthetase type III N terminal
TspO_MBR             PF03073.10   148 sp|O34694|YTAB_BACSU -            155   4.7e-32  110.5  20.1   1   1   7.4e-36   5.5e-32  110.3  20.1     3   145    10   150     8   153 0.93 TspO/MBR family
DUF4064              PF13273.1    100 sp|O34694|YTAB_BACSU -            155      0.16   12.1   8.2   2   2   2.5e-05      0.19   11.8   7.0    10    91    46   134    43   151 0.78 Protein of unknown function (DUF4064)
Abhydrolase_5        PF12695.2    145 sp|O34973|YTAP_BACSU -            299   5.8e-13   48.8   0.0   1   1     8e-16   1.1e-12   47.9   0.0    16   131    94   260    66   282 0.76 Alpha/beta hydrolase family
DLH                  PF01738.13   218 sp|O34973|YTAP_BACSU -            299   1.6e-09   37.3   0.0   1   1   1.8e-11   2.4e-08   33.5   0.0    32   172    95   260    50   272 0.73 Dienelactone hydrolase family
AXE1                 PF05448.7    320 sp|O34973|YTAP_BACSU -            299   2.6e-07   29.4   0.0   1   1   4.5e-10   6.1e-07   28.2   0.0    62   203    45   189    23   198 0.68 Acetyl xylan esterase (AXE1)
Peptidase_S9         PF00326.16   213 sp|O34973|YTAP_BACSU -            299   3.9e-07   29.5   0.0   1   1   3.8e-10   5.1e-07   29.1   0.0    44   187   141   281    94   299 0.70 Prolyl oligopeptidase family
BAAT_C               PF08840.6    213 sp|O34973|YTAP_BACSU -            299   3.3e-05   23.6   0.0   1   1   3.8e-08   5.1e-05   23.0   0.0     9    52   148   191   146   260 0.81 BAAT / Acyl-CoA thioester hydrolase C terminal
Peptidase_S15        PF02129.13   272 sp|O34973|YTAP_BACSU -            299   3.5e-05   23.3   0.0   1   1   4.2e-08   5.6e-05   22.6   0.0    10   146    55   204    50   236 0.77 X-Pro dipeptidyl-peptidase (S15 family)
Abhydrolase_6        PF12697.2    228 sp|O34973|YTAP_BACSU -            299   3.6e-05   23.7   0.1   1   1   1.7e-07   0.00023   21.1   0.1    17    95    96   189    86   284 0.67 Alpha/beta hydrolase family
Hydrolase_4          PF12146.3     79 sp|O34973|YTAP_BACSU -            299    0.0022   17.7   0.0   1   1   5.2e-06     0.007   16.1   0.0    34    60    95   121    87   131 0.82 Putative lysophospholipase
Abhydrolase_7        PF12715.2    390 sp|O34973|YTAP_BACSU -            299     0.022   13.6   0.0   1   1   2.4e-05     0.032   13.1   0.0   189   318   125   245    17   247 0.80 Abhydrolase family
DUF2048              PF09752.4    348 sp|O34973|YTAP_BACSU -            299     0.029   13.2   0.1   1   1   3.1e-05     0.042   12.7   0.1   152   203   135   189    97   203 0.83 Uncharacterized conserved protein (DUF2048)
Abhydrolase_1        PF00561.15   230 sp|O34973|YTAP_BACSU -            299     0.056   12.9   0.5   1   2   0.00016      0.22   11.0   0.5     3    78   107   195   105   225 0.75 alpha/beta hydrolase fold
MFS_1                PF07690.11   352 sp|O34367|YTBD_BACSU -            396   2.5e-42  144.8  59.8   1   2   5.1e-43   2.5e-39  134.9  46.4     2   328    16   325    15   327 0.84 Major Facilitator Superfamily
MFS_1                PF07690.11   352 sp|O34367|YTBD_BACSU -            396   2.5e-42  144.8  59.8   2   2     2e-07   0.00097   17.9   5.9   107   174   321   388   317   396 0.87 Major Facilitator Superfamily
Sugar_tr             PF00083.19   451 sp|O34367|YTBD_BACSU -            396   1.8e-10   40.0  19.5   1   3   3.6e-14   1.8e-10   40.0  19.5    47   186    46   179    23   189 0.93 Sugar (and other) transporter
Sugar_tr             PF00083.19   451 sp|O34367|YTBD_BACSU -            396   1.8e-10   40.0  19.5   3   3   2.9e-05      0.14   10.6   5.0    46    97   335   386   331   390 0.92 Sugar (and other) transporter
MFS_2                PF13347.1    428 sp|O34367|YTBD_BACSU -            396   0.00015   20.2  42.7   1   2   8.8e-07    0.0043   15.4   8.5   226   347    11   130     6   135 0.88 MFS/sugar transport protein
MFS_2                PF13347.1    428 sp|O34367|YTBD_BACSU -            396   0.00015   20.2  42.7   2   2   4.2e-06     0.021   13.2  23.6   149   342   139   326   129   372 0.64 MFS/sugar transport protein
Aldo_ket_red         PF00248.16   283 sp|O34678|YTBE_BACSU -            280   9.2e-60  201.8   0.1   1   1   7.4e-64   1.1e-59  201.6   0.1    13   282    27   266    19   267 0.96 Aldo/keto reductase family
Epimerase            PF01370.16   236 sp|P53560|YTBQ_BACSU -            253   5.7e-14   52.1   0.0   1   1   3.3e-17   7.1e-14   51.8   0.0     1   174     4   177     4   193 0.76 NAD dependent epimerase/dehydratase family
RmlD_sub_bind        PF04321.12   287 sp|P53560|YTBQ_BACSU -            253   1.7e-05   23.8   0.0   1   1     1e-08   2.2e-05   23.5   0.0     2   135     3   153     1   188 0.81 RmlD substrate binding domain
3Beta_HSD            PF01073.14   280 sp|P53560|YTBQ_BACSU -            253   2.3e-05   23.2   0.0   1   1   1.7e-08   3.6e-05   22.6   0.0     1   155     5   152     5   169 0.77 3-beta hydroxysteroid dehydrogenase/isomerase family
adh_short            PF00106.20   167 sp|P53560|YTBQ_BACSU -            253   0.00021   21.2   0.2   1   1   8.4e-06     0.018   14.9   0.2     2   135     3   112     2   119 0.59 short chain dehydrogenase
NAD_binding_10       PF13460.1    183 sp|P53560|YTBQ_BACSU -            253    0.0012   18.9   0.0   1   1   7.8e-07    0.0017   18.4   0.0     1   105     4   119     4   142 0.79 NADH(P)-binding
NmrA                 PF05368.8    233 sp|P53560|YTBQ_BACSU -            253    0.0064   15.7   0.1   1   2   0.00019       0.4    9.9   0.0     1   110     4   119     4   126 0.74 NmrA-like family
Rotavirus_VP7        PF05868.6    249 sp|P53560|YTBQ_BACSU -            253     0.011   14.9   0.2   1   1   1.1e-05     0.023   13.8   0.1   158   191    68   100    58   121 0.82 Rotavirus major outer capsid protein VP7
UDPG_MGDP_dh_N       PF03721.9    185 sp|O34862|YTCA_BACSU -            428   1.4e-61  207.1   0.1   1   1   3.5e-64   3.5e-61  205.8   0.1     1   179     1   175     1   183 0.96 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain
UDPG_MGDP_dh         PF00984.14    96 sp|O34862|YTCA_BACSU -            428   8.5e-36  122.0   0.0   1   1   1.7e-38   1.7e-35  121.0   0.0     2    96   197   291   196   291 0.98 UDP-glucose/GDP-mannose dehydrogenase family, central domain
UDPG_MGDP_dh_C       PF03720.10   106 sp|O34862|YTCA_BACSU -            428   1.7e-27   95.6   0.0   1   1   6.8e-30   6.7e-27   93.7   0.0     1   105   312   411   312   412 0.94 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain
F420_oxidored        PF03807.12    96 sp|O34862|YTCA_BACSU -            428   2.6e-07   30.9   0.0   1   3   0.00012      0.12   12.7   0.0     1    69     2    81     2   114 0.88 NADP oxidoreductase coenzyme F420-dependent
F420_oxidored        PF03807.12    96 sp|O34862|YTCA_BACSU -            428   2.6e-07   30.9   0.0   3   3   0.00036      0.36   11.2   0.0    14    92   333   405   328   408 0.77 NADP oxidoreductase coenzyme F420-dependent
NAD_binding_2        PF03446.10   163 sp|O34862|YTCA_BACSU -            428   2.6e-06   27.3   0.0   1   2   2.3e-07   0.00022   21.0   0.0     2   113     1   136     1   139 0.86 NAD binding domain of 6-phosphogluconate dehydrogenase
2-Hacid_dh_C         PF02826.14   178 sp|O34862|YTCA_BACSU -            428   0.00031   19.9   0.1   2   2   0.00011       0.1   11.7   0.0    50    99   332   381   282   385 0.92 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain
NAD_Gly3P_dh_N       PF01210.18   157 sp|O34862|YTCA_BACSU -            428   0.00035   20.3   0.0   1   1   2.6e-06    0.0026   17.5   0.0     1    79     2    83     2   155 0.70 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus
Pyr_redox            PF00070.22    80 sp|O34862|YTCA_BACSU -            428   0.00042   20.6   0.3   1   2   1.9e-05     0.019   15.3   0.1     1    25     2    26     2    40 0.91 Pyridine nucleotide-disulphide oxidoreductase
ApbA                 PF02558.11   151 sp|O34862|YTCA_BACSU -            428   0.00044   19.7   0.0   1   1   1.7e-06    0.0016   17.8   0.0     1    75     3    81     3   118 0.87 Ketopantoate reductase PanE/ApbA
NAD_binding_10       PF13460.1    183 sp|O34862|YTCA_BACSU -            428    0.0099   15.8   0.0   1   2   0.00018      0.18   11.7   0.0     1    87     3   105     3   125 0.84 NADH(P)-binding
3HCDH_N              PF02737.13   180 sp|O34862|YTCA_BACSU -            428     0.026   14.1   0.1   1   2   0.00021       0.2   11.2   0.0     1    39     2    40     2    52 0.89 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain
FAD_binding_3        PF01494.14   356 sp|O34862|YTCA_BACSU -            428     0.029   13.4   0.3   1   1   4.9e-05     0.049   12.6   0.3     3    38     2    37     1    44 0.88 FAD binding domain
TrkA_N               PF02254.13   116 sp|O34862|YTCA_BACSU -            428     0.075   13.0   0.1   1   1   0.00035      0.34   10.8   0.0     1    45     3    47     3    57 0.89 TrkA-N domain
ThiF                 PF00899.16   136 sp|O34862|YTCA_BACSU -            428      0.19   11.5   2.4   1   1   0.00046      0.46   10.3   0.2     4    36     2    33     1    45 0.81 ThiF family
Epimerase            PF01370.16   236 sp|O34886|YTCB_BACSU -            316   3.4e-59  200.1   0.0   1   1   3.6e-62   4.1e-59  199.8   0.0     1   236     3   242     3   242 0.95 NAD dependent epimerase/dehydratase family
3Beta_HSD            PF01073.14   280 sp|O34886|YTCB_BACSU -            316   1.9e-19   69.4   0.0   1   1   2.3e-22   2.7e-19   68.9   0.0     1   222     4   222     4   233 0.78 3-beta hydroxysteroid dehydrogenase/isomerase family
NAD_binding_4        PF07993.7    249 sp|O34886|YTCB_BACSU -            316   1.1e-18   67.0   0.0   1   2   3.2e-06    0.0037   16.2   0.0     1    22     5    26     5    30 0.89 Male sterility protein
NAD_binding_4        PF07993.7    249 sp|O34886|YTCB_BACSU -            316   1.1e-18   67.0   0.0   2   2   3.9e-16   4.5e-13   48.7   0.0    78   202    65   183    60   227 0.83 Male sterility protein
RmlD_sub_bind        PF04321.12   287 sp|O34886|YTCB_BACSU -            316   6.5e-15   54.7   0.0   1   1   1.8e-17     2e-14   53.1   0.0     1   233     1   262     1   297 0.80 RmlD substrate binding domain
NAD_binding_10       PF13460.1    183 sp|O34886|YTCB_BACSU -            316   7.7e-14   52.1   0.0   1   1   1.8e-16   2.1e-13   50.7   0.0     1   157     3   190     3   205 0.80 NADH(P)-binding
Polysacc_synt_2      PF02719.10   294 sp|O34886|YTCB_BACSU -            316   7.5e-12   44.7   0.0   1   1   2.7e-14   3.1e-11   42.7   0.0     1   188     3   196     3   230 0.75 Polysaccharide biosynthesis protein
adh_short            PF00106.20   167 sp|O34886|YTCB_BACSU -            316   0.00016   21.6   0.0   1   1     1e-06    0.0012   18.8   0.0     3   141     3   131     2   137 0.73 short chain dehydrogenase
NmrA                 PF05368.8    233 sp|O34886|YTCB_BACSU -            316   0.00039   19.7   0.0   1   1   3.8e-06    0.0043   16.3   0.0     1   112     3   135     3   293 0.67 NmrA-like family
Epimerase_Csub       PF13950.1     62 sp|O34886|YTCB_BACSU -            316     0.011   15.7   0.0   1   1   1.5e-05     0.018   14.9   0.0     3    46   257   300   255   305 0.93 UDP-glucose 4-epimerase C-term subunit
DapB_N               PF01113.15   124 sp|O34886|YTCB_BACSU -            316     0.013   15.4   0.0   1   1     3e-05     0.034   14.0   0.0     1    31     1    31     1    84 0.84 Dihydrodipicolinate reductase, N-terminus
FAD_binding_4        PF01565.18   139 sp|O34886|YTCB_BACSU -            316     0.037   13.5   0.0   1   1   0.00012      0.14   11.6   0.0     7    41   100   134    98   144 0.88 FAD binding domain
Ldh_1_N              PF00056.18   141 sp|O34886|YTCB_BACSU -            316     0.087   12.6   0.0   1   1   0.00014      0.16   11.7   0.0     1    29     1    29     1   126 0.75 lactate/malate dehydrogenase, NAD binding domain
Glycos_transf_1      PF00534.15   172 sp|O34413|YTCC_BACSU -            407   4.2e-46  156.4   0.0   1   1   2.2e-49   6.5e-46  155.8   0.0     2   172   179   355   178   355 0.97 Glycosyl transferases group 1
Glyco_trans_1_4      PF13692.1    135 sp|O34413|YTCC_BACSU -            407   4.7e-20   72.1   0.0   1   1   3.9e-23   1.2e-19   70.8   0.0     3   135   192   341   190   341 0.86 Glycosyl transferases group 1
Glyco_trans_1_2      PF13524.1     92 sp|O34413|YTCC_BACSU -            407   5.8e-11   42.5   0.0   1   1   4.3e-14   1.3e-10   41.4   0.0     9    90   285   369   270   371 0.91 Glycosyl transferases group 1
Glyco_transf_4       PF13439.1    177 sp|O34413|YTCC_BACSU -            407   4.1e-06   26.6   0.0   1   1   4.2e-09   1.2e-05   25.0   0.0    70   174    69   165    28   167 0.82 Glycosyltransferase Family 4
Glyco_trans_4_4      PF13579.1    160 sp|O34413|YTCC_BACSU -            407     0.013   15.5   0.0   1   1   2.1e-05     0.062   13.4   0.0    34   156    51   156    29   160 0.71 Glycosyl transferase 4-like domain
AMP-binding          PF00501.23   417 sp|C0SPB0|YTCI_BACSU -            529   1.9e-84  283.4   0.0   1   1   4.7e-88   2.3e-84  283.2   0.0     8   416    25   423    19   424 0.83 AMP-binding enzyme
AMP-binding_C        PF13193.1     73 sp|C0SPB0|YTCI_BACSU -            529   7.2e-19   68.5   1.1   1   1   3.4e-22   1.7e-18   67.3   1.1     1    73   432   510   432   510 0.89 AMP-binding enzyme C-terminal domain
DUF4414              PF14377.1    108 sp|C0SPB0|YTCI_BACSU -            529     0.079   12.8   0.2   1   1   2.6e-05      0.13   12.2   0.2     9    76   451   526   446   529 0.89 Domain of unknown function (DUF4414)
BPD_transp_1         PF00528.17   185 sp|P53561|YTCP_BACSU -            286   1.2e-20   73.8  11.1   1   1   1.6e-24   1.2e-20   73.8  11.1     3   182    85   278    83   280 0.85 Binding-protein-dependent transport system inner membrane component
CstA                 PF02554.9    376 sp|P53561|YTCP_BACSU -            286       1.4    7.4  15.9   1   2   2.9e-05      0.22   10.1  11.5   130   261     8   151     2   182 0.76 Carbon starvation protein CstA
SBP_bac_8            PF13416.1    281 sp|Q795R2|YTCQ_BACSU -            498   3.5e-16   59.7   3.1   1   1   7.1e-20   3.5e-16   59.7   3.1     3   234    60   340    58   359 0.71 Bacterial extracellular solute-binding protein
SBP_bac_1            PF01547.20   315 sp|Q795R2|YTCQ_BACSU -            498   4.7e-14   52.8  10.4   1   2   1.1e-17   5.2e-14   52.6   5.5    13   306    59   352    52   360 0.77 Bacterial extracellular solute-binding protein
JmjN                 PF02375.12    34 sp|Q795R2|YTCQ_BACSU -            498     0.059   12.9   0.0   1   1   3.9e-05      0.19   11.2   0.0     8    24   243   259   241   261 0.94 jmjN domain
NTP_transferase      PF00483.18   248 sp|P42407|YTDA_BACSU -            272   5.3e-34  117.6   0.0   1   1   2.1e-37   6.2e-34  117.3   0.0     1   243     4   262     4   267 0.92 Nucleotidyl transferase
NTP_transf_3         PF12804.2    160 sp|P42407|YTDA_BACSU -            272   3.3e-09   37.0   0.0   1   1   1.8e-12   5.2e-09   36.3   0.0     1   150     5   222     5   233 0.81 MobA-like NTP transferase domain
Glycos_transf_2      PF00535.21   169 sp|P42407|YTDA_BACSU -            272    0.0025   17.5   0.0   1   1   1.2e-06    0.0037   16.9   0.0    51   114    91   156    78   213 0.78 Glycosyl transferase family 2
IspD                 PF01128.14   221 sp|P42407|YTDA_BACSU -            272     0.023   14.2   0.0   1   2   3.9e-05      0.12   11.9   0.0     3    55     5    59     3    69 0.86 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase
CTP_transf_3         PF02348.14   217 sp|P42407|YTDA_BACSU -            272      0.13   11.8   0.0   1   1   6.8e-05       0.2   11.2   0.0    15    51    24    60    20    94 0.83 Cytidylyltransferase
BPD_transp_1         PF00528.17   185 sp|C0SPB3|YTEP_BACSU -            321   8.1e-15   54.8  10.7   2   2   1.1e-18   8.1e-15   54.8  10.7     5   182   111   314   107   317 0.75 Binding-protein-dependent transport system inner membrane component
GFO_IDH_MocA_C       PF02894.12   115 sp|O34371|YTET_BACSU -            428   4.3e-37  126.4   0.2   1   1   9.8e-41   7.3e-37  125.6   0.2     1   114   141   275   141   276 0.99 Oxidoreductase family, C-terminal alpha/beta domain
GFO_IDH_MocA         PF01408.17   120 sp|O34371|YTET_BACSU -            428   7.9e-22   78.0   0.0   1   1   1.8e-25   1.3e-21   77.2   0.0     2   119     3   128     2   129 0.93 Oxidoreductase family, NAD-binding Rossmann fold
Polysacc_synt        PF01943.12   273 sp|O34674|YTGP_BACSU -            544   2.6e-76  256.4  59.5   1   3   4.1e-79   1.2e-75  254.2  30.3     1   272     5   319     5   320 0.99 Polysaccharide biosynthesis protein
Polysacc_synt        PF01943.12   273 sp|O34674|YTGP_BACSU -            544   2.6e-76  256.4  59.5   2   3   0.00029      0.86    8.8  19.7    80   243   338   502   324   509 0.76 Polysaccharide biosynthesis protein
Polysacc_synt_C      PF14667.1    146 sp|O34674|YTGP_BACSU -            544   1.8e-30  105.6  24.7   3   3     6e-34   1.8e-30  105.6  24.7     1   145   375   523   375   524 0.93 Polysaccharide biosynthesis C-terminal domain
MVIN                 PF03023.9    452 sp|O34674|YTGP_BACSU -            544   3.8e-13   48.6  42.9   1   1   1.3e-16   3.8e-13   48.6  42.9    12   445    40   489    30   496 0.78 MviN-like protein
MatE                 PF01554.13   162 sp|O34674|YTGP_BACSU -            544   4.8e-09   36.0  26.0   2   5   1.3e-07    0.0004   20.0   8.7    36   159    48   174    16   177 0.92 MatE
MatE                 PF01554.13   162 sp|O34674|YTGP_BACSU -            544   4.8e-09   36.0  26.0   3   5   9.8e-11   2.9e-07   30.2   9.3    36   161   296   421   277   422 0.92 MatE
CcoS                 PF03597.10    45 sp|O34674|YTGP_BACSU -            544      0.45   10.0   0.0   1   4   0.00015      0.45   10.0   0.0     4    23    25    44    23    48 0.89 Cytochrome oxidase maturation protein cbb3-type
Bac_Ubq_Cox          PF01654.12   436 sp|C0SP90|YTHA_BACSU -            443  1.4e-121  405.9  26.6   1   1  2.2e-125  1.6e-121  405.7  26.6     1   435     6   434     6   435 0.97 Bacterial Cytochrome Ubiquinol Oxidase
Cyto_ox_2            PF02322.10   328 sp|O34505|YTHB_BACSU -            346   1.5e-15   57.1  30.8   1   1   1.2e-19   1.8e-15   56.9  30.8     4   327     8   335     5   336 0.77 Cytochrome oxidase subunit II
ABC_tran             PF00005.22   137 sp|O34977|YTHP_BACSU -            236   1.9e-23   83.2   0.0   1   1   1.9e-26   2.8e-23   82.7   0.0     1   136    21   153    21   154 0.85 ABC transporter
AAA_21               PF13304.1    303 sp|O34977|YTHP_BACSU -            236   1.2e-17   64.7   0.5   1   2   1.9e-08   2.8e-05   24.2   0.4     3    43    35    64    33   102 0.70 AAA domain
AAA_21               PF13304.1    303 sp|O34977|YTHP_BACSU -            236   1.2e-17   64.7   0.5   2   2   5.7e-13   8.4e-10   39.0   0.0   223   297   112   183    76   185 0.82 AAA domain
SMC_N                PF02463.14   220 sp|O34977|YTHP_BACSU -            236   7.9e-05   21.9   0.2   1   2   7.3e-05      0.11   11.7   0.1    26    49    33    53    18    63 0.82 RecF/RecN/SMC N terminal domain
AAA_29               PF13555.1     62 sp|O34977|YTHP_BACSU -            236   0.00078   18.9   0.2   1   1     1e-06    0.0015   18.0   0.2    22    44    30    52    22    55 0.85 P-loop containing region of AAA domain
AAA_15               PF13175.1    415 sp|O34977|YTHP_BACSU -            236    0.0018   17.4   0.0   1   2   9.9e-05      0.15   11.1   0.0    26    46    35    59     9   113 0.78 AAA ATPase domain
ArgK                 PF03308.11   267 sp|O34977|YTHP_BACSU -            236     0.006   15.3   0.1   1   1   5.8e-06    0.0086   14.8   0.1    12    49    14    51     3    62 0.84 ArgK protein
AAA_23               PF13476.1    202 sp|O34977|YTHP_BACSU -            236     0.009   16.3   0.1   1   1     1e-05     0.015   15.6   0.1    20    40    32    52    19    59 0.83 AAA domain
AAA_25               PF13481.1    194 sp|O34977|YTHP_BACSU -            236     0.013   14.9   0.1   1   2   0.00038      0.57    9.5   0.0    29    54    28    52     2    72 0.78 AAA domain
DUF815               PF05673.8    250 sp|O34977|YTHP_BACSU -            236     0.019   13.8   0.1   1   1   2.4e-05     0.035   13.0   0.1    44    74    22    52     9    59 0.85 Protein of unknown function (DUF815)
MMR_HSR1             PF01926.18   116 sp|O34977|YTHP_BACSU -            236      0.13   12.2   0.2   1   1   0.00012      0.18   11.7   0.2     2    21    34    53    33   193 0.91 50S ribosome-binding GTPase
Pro_CA               PF00484.14   153 sp|O34872|YTIB_BACSU -            187   3.5e-29  101.7   0.0   1   1   5.7e-33   4.2e-29  101.5   0.0     2   153    34   178    33   178 0.80 Carbonic anhydrase
Glucosaminidase      PF01832.15   136 sp|O34872|YTIB_BACSU -            187     0.016   15.3   0.0   1   1   4.1e-06     0.031   14.4   0.0    62    95   128   161   111   185 0.82 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase
Phage_holin_4        PF05105.7    118 sp|O34883|YTKC_BACSU -            134     3e-17   62.3   4.3   1   1   2.5e-21   3.7e-17   62.0   4.3     4   117    17   129    14   130 0.97 Holin family
NUDIX                PF00293.23   135 sp|O35013|YTKD_BACSU -            158   3.9e-12   45.9   0.1   1   1   3.1e-16   4.6e-12   45.7   0.1     5    70    28    86    24   131 0.79 NUDIX domain
adh_short_C2         PF13561.1    241 sp|O34308|YTKK_BACSU -            255   9.8e-22   77.8   0.0   1   1   3.8e-25   1.1e-21   77.6   0.0     5   241    10   247     7   247 0.89 Enoyl-(Acyl carrier protein) reductase
adh_short            PF00106.20   167 sp|O34308|YTKK_BACSU -            255     6e-19   68.5   0.0   1   1   2.6e-22   7.6e-19   68.2   0.0     2   163     3   170     2   174 0.89 short chain dehydrogenase
NAD_binding_10       PF13460.1    183 sp|O34308|YTKK_BACSU -            255   4.5e-06   26.7   0.0   1   1   3.5e-09     1e-05   25.6   0.0     2   178     5   225     5   230 0.68 NADH(P)-binding
KR                   PF08659.5    181 sp|O34308|YTKK_BACSU -            255   4.9e-06   26.3   0.0   1   1   2.6e-09   7.6e-06   25.7   0.0     4   122     5   122     3   130 0.84 KR domain
Epimerase            PF01370.16   236 sp|O34308|YTKK_BACSU -            255   0.00055   19.4   0.0   1   1     3e-07   0.00088   18.7   0.0     9    76    12    90     4   128 0.76 NAD dependent epimerase/dehydratase family
Lactamase_B_3        PF13483.1    163 sp|Q795U4|YTKL_BACSU -            227   6.8e-26   90.9   0.9   1   1   1.7e-29   8.2e-26   90.6   0.9     1   163     2   193     2   193 0.82 Beta-lactamase superfamily domain
Lactamase_B_2        PF12706.2    194 sp|Q795U4|YTKL_BACSU -            227   1.6e-19   70.2   1.5   1   1   3.9e-23   1.9e-19   69.9   1.5     2   194    19   194    18   194 0.78 Beta-lactamase superfamily domain
Lactamase_B          PF00753.22   194 sp|Q795U4|YTKL_BACSU -            227     1e-13   51.3   4.1   1   1   2.6e-17   1.3e-13   51.0   4.1     5   180     7   185     3   206 0.92 Metallo-beta-lactamase superfamily
NMT1_2               PF13379.1    252 sp|C0SP84|YTLA_BACSU -            334   5.1e-31  107.9   0.1   1   1   1.3e-34   6.4e-31  107.6   0.1    16   243    42   258    26   264 0.88 NMT1-like family
NMT1                 PF09084.6    216 sp|C0SP84|YTLA_BACSU -            334   1.6e-22   80.1   0.7   1   1   4.7e-26   2.3e-22   79.6   0.7     5   212    45   254    43   257 0.87 NMT1/THI5 like
Phosphonate-bd       PF12974.2    243 sp|C0SP84|YTLA_BACSU -            334   0.00091   18.6   0.0   1   1   3.3e-07    0.0016   17.8   0.0    28   142    60   170    56   273 0.80 ABC transporter, phosphonate, periplasmic substrate-binding protein
ABC_tran             PF00005.22   137 sp|O34314|YTLC_BACSU -            260   5.7e-31  107.6   0.0   1   1   1.1e-33   8.1e-31  107.1   0.0     2   136    24   162    23   163 0.96 ABC transporter
AAA_21               PF13304.1    303 sp|O34314|YTLC_BACSU -            260     4e-10   40.1   0.1   1   2   5.1e-06    0.0036   17.3   0.0     3    46    37    82    35    96 0.71 AAA domain
AAA_21               PF13304.1    303 sp|O34314|YTLC_BACSU -            260     4e-10   40.1   0.1   2   2   2.7e-07   0.00019   21.5   0.0   223   298   121   194    72   196 0.72 AAA domain
AAA_16               PF13191.1    185 sp|O34314|YTLC_BACSU -            260   0.00021   21.3   0.4   1   1   8.1e-07   0.00057   19.9   0.1    20   157    29   159    17   207 0.52 AAA ATPase domain
AAA                  PF00004.24   132 sp|O34314|YTLC_BACSU -            260   0.00098   19.3   0.0   1   1   1.1e-05    0.0079   16.4   0.0     3    66    38   160    36   166 0.63 ATPase family associated with various cellular activities (AAA)
DUF258               PF03193.11   161 sp|O34314|YTLC_BACSU -            260    0.0042   16.2   0.0   1   1   9.7e-06    0.0068   15.5   0.0    20    58    17    56     5    74 0.79 Protein of unknown function, DUF258
Mg_chelatase         PF01078.16   207 sp|O34314|YTLC_BACSU -            260     0.013   14.7   0.0   1   1   3.5e-05     0.025   13.7   0.0     6    93    17   101    13   122 0.79 Magnesium chelatase, subunit ChlI
AAA_19               PF13245.1     76 sp|O34314|YTLC_BACSU -            260     0.027   14.2   0.0   1   1   8.9e-05     0.063   13.0   0.0    16    46    39    65    30    77 0.81 Part of AAA domain
AAA_29               PF13555.1     62 sp|O34314|YTLC_BACSU -            260     0.031   13.7   0.0   1   1   8.4e-05      0.06   12.8   0.0    21    46    31    56    19    64 0.75 P-loop containing region of AAA domain
Arch_ATPase          PF01637.13   234 sp|O34314|YTLC_BACSU -            260     0.033   13.9   0.0   1   1   8.6e-05     0.061   13.0   0.0    20    52    33    64    21   251 0.78 Archaeal ATPase
AAA_25               PF13481.1    194 sp|O34314|YTLC_BACSU -            260     0.043   13.2   0.0   1   1   0.00012     0.083   12.2   0.0    31    55    31    55    16    79 0.82 AAA domain
NACHT                PF05729.7    166 sp|O34314|YTLC_BACSU -            260     0.044   13.4   0.0   1   1    0.0002      0.14   11.7   0.0     5    24    38    57    34   105 0.90 NACHT domain
AAA_23               PF13476.1    202 sp|O34314|YTLC_BACSU -            260     0.067   13.5   0.9   1   1    0.0001     0.071   13.4   0.9    12    41    25    55    14   258 0.91 AAA domain
SbcCD_C              PF13558.1     90 sp|O34314|YTLC_BACSU -            260     0.072   13.0   0.0   1   1   0.00024      0.17   11.8   0.0    60    79   149   168   132   177 0.76 Putative exonuclease SbcCD, C subunit
RuvB_N               PF05496.7    234 sp|O34314|YTLC_BACSU -            260     0.072   12.1   0.0   1   1   0.00018      0.13   11.3   0.0    47    72    30    55    14    61 0.85 Holliday junction DNA helicase ruvB N-terminus
AAA_22               PF13401.1    131 sp|O34314|YTLC_BACSU -            260       0.1   12.7   0.3   1   1   0.00038      0.27   11.3   0.2     4    23    33    52    30   218 0.89 AAA domain
AAA_30               PF13604.1    196 sp|O34314|YTLC_BACSU -            260      0.11   12.1   0.0   1   1   0.00027      0.19   11.2   0.0    16    50    32    65    18    75 0.81 AAA domain
RNA_helicase         PF00910.17   107 sp|O34314|YTLC_BACSU -            260      0.11   12.7   0.0   1   1   0.00051      0.36   11.0   0.0     2    23    37    58    36    89 0.64 RNA helicase
AAA_28               PF13521.1    163 sp|O34314|YTLC_BACSU -            260      0.11   12.4   0.0   1   1   0.00031      0.22   11.4   0.0     2    20    36    54    35    71 0.84 AAA domain
NB-ARC               PF00931.17   287 sp|O34314|YTLC_BACSU -            260      0.12   11.2   0.1   1   1   0.00063      0.45    9.3   0.0    18    38    32    52    17    55 0.83 NB-ARC domain
Rad17                PF03215.10   519 sp|O34314|YTLC_BACSU -            260      0.14   10.8   0.0   1   1   0.00029       0.2   10.2   0.0    45    68    33    56    14    98 0.75 Rad17 cell cycle checkpoint protein
BPD_transp_1         PF00528.17   185 sp|O34649|YTLD_BACSU -            270   6.8e-26   90.9  17.2   1   1   1.4e-29   1.1e-25   90.2  17.2     3   182    90   264    88   267 0.90 Binding-protein-dependent transport system inner membrane component
FtsX                 PF02687.16   121 sp|O34649|YTLD_BACSU -            270       5.5    6.7  29.9   3   3   8.7e-05      0.65    9.7  15.9     4   104   144   254   140   258 0.63 FtsX-like permease family
DAGK_cat             PF00781.19   130 sp|O34799|YTLR_BACSU -            309   2.6e-22   78.6   0.0   1   1     5e-26   3.7e-22   78.1   0.0     1   104     3   107     3   129 0.91 Diacylglycerol kinase catalytic domain
NAD_kinase           PF01513.16   285 sp|O34799|YTLR_BACSU -            309    0.0059   15.4   0.0   1   1   1.2e-06    0.0088   14.8   0.0    67   109    51    94    10   112 0.77 ATP-NAD kinase
Peptidase_S9         PF00326.16   213 sp|O34493|YTMA_BACSU -            257   3.4e-23   81.9   0.0   1   1   3.3e-26   4.5e-23   81.6   0.0     8   207    65   255    58   257 0.90 Prolyl oligopeptidase family
Abhydrolase_5        PF12695.2    145 sp|O34493|YTMA_BACSU -            257   3.9e-13   49.3   0.0   1   1   4.3e-16   5.8e-13   48.8   0.0    21   144    65   236    50   237 0.68 Alpha/beta hydrolase family
DLH                  PF01738.13   218 sp|O34493|YTMA_BACSU -            257   1.9e-11   43.6   0.1   1   1     1e-13   1.4e-10   40.8   0.1    35   195    64   243    29   255 0.85 Dienelactone hydrolase family
Abhydrolase_2        PF02230.11   216 sp|O34493|YTMA_BACSU -            257   2.3e-10   40.2   0.2   1   2   7.2e-07   0.00097   18.6   0.0    99   139   108   148    96   165 0.85 Phospholipase/Carboxylesterase
Abhydrolase_2        PF02230.11   216 sp|O34493|YTMA_BACSU -            257   2.3e-10   40.2   0.2   2   2   2.9e-07   0.00039   19.9   0.0   150   215   186   253   175   254 0.85 Phospholipase/Carboxylesterase
BAAT_C               PF08840.6    213 sp|O34493|YTMA_BACSU -            257   1.1e-09   38.2   0.0   1   1   3.8e-12   5.1e-09   36.1   0.0     9   163   101   238    99   241 0.85 BAAT / Acyl-CoA thioester hydrolase C terminal
Abhydrolase_6        PF12697.2    228 sp|O34493|YTMA_BACSU -            257   9.2e-08   32.2   0.0   1   1   4.3e-10   5.7e-07   29.6   0.0    17   204    63   221    54   249 0.71 Alpha/beta hydrolase family
Peptidase_S15        PF02129.13   272 sp|O34493|YTMA_BACSU -            257   3.7e-06   26.5   0.1   1   2   5.8e-05     0.078   12.3   0.0    52   139    58   152    34   165 0.82 X-Pro dipeptidyl-peptidase (S15 family)
Peptidase_S15        PF02129.13   272 sp|O34493|YTMA_BACSU -            257   3.7e-06   26.5   0.1   2   2     6e-05     0.081   12.3   0.0   215   257   180   223   157   237 0.84 X-Pro dipeptidyl-peptidase (S15 family)
Abhydrolase_1        PF00561.15   230 sp|O34493|YTMA_BACSU -            257   6.3e-06   25.9   0.2   2   2   6.6e-06    0.0089   15.6   0.0   164   202   181   220   148   234 0.81 alpha/beta hydrolase fold
FSH1                 PF03959.8    212 sp|O34493|YTMA_BACSU -            257   1.4e-05   24.6   0.0   1   1   1.5e-08   2.1e-05   24.1   0.0   102   206   114   242    82   247 0.71 Serine hydrolase (FSH1)
Abhydrolase_3        PF07859.8    211 sp|O34493|YTMA_BACSU -            257   0.00056   19.5   0.0   1   1   2.3e-06     0.003   17.1   0.0    50   209    96   238    68   240 0.73 alpha/beta hydrolase fold
AXE1                 PF05448.7    320 sp|O34493|YTMA_BACSU -            257   0.00085   17.9   0.0   1   2   0.00053      0.71    8.3   0.0    51   125    12    87     3    96 0.77 Acetyl xylan esterase (AXE1)
APH                  PF01636.18   239 sp|C0SPC1|YTMP_BACSU -            204   6.2e-21   75.2   0.2   1   1   3.9e-24   7.3e-21   74.9   0.2    68   239     4   167     1   167 0.85 Phosphotransferase enzyme family
Choline_kinase       PF01633.15   211 sp|C0SPC1|YTMP_BACSU -            204   7.7e-09   35.4   0.2   1   1   1.2e-11   2.2e-08   33.9   0.2   116   187    67   138     2   159 0.70 Choline/ethanolamine kinase
EcKinase             PF02958.15   294 sp|C0SPC1|YTMP_BACSU -            204   5.3e-05   22.5   0.1   1   1   3.8e-08   7.1e-05   22.0   0.1   214   290    94   161    56   164 0.83 Ecdysteroid kinase
DUF1679              PF07914.6    414 sp|C0SPC1|YTMP_BACSU -            204    0.0016   17.1   0.0   1   1   9.5e-07    0.0018   17.0   0.0   264   315    90   137    16   159 0.78 Protein of unknown function (DUF1679)
RIO1                 PF01163.17   189 sp|C0SPC1|YTMP_BACSU -            204    0.0026   17.1   0.1   1   1   2.2e-06    0.0041   16.5   0.1    95   155    59   125    53   133 0.72 RIO1 family
Pkinase              PF00069.20   260 sp|C0SPC1|YTMP_BACSU -            204     0.013   14.6   0.1   1   1   9.2e-06     0.017   14.2   0.1   109   145    78   123    33   139 0.81 Protein kinase domain
Acetyltransf_7       PF13508.1     79 sp|O34350|YTMI_BACSU -            178   2.1e-11   43.8   0.0   1   1   9.9e-15   2.9e-11   43.3   0.0     3    79    52   144    50   144 0.74 Acetyltransferase (GNAT) domain
Acetyltransf_1       PF00583.19    83 sp|O34350|YTMI_BACSU -            178   1.3e-10   41.1   0.0   1   1   5.9e-14   1.8e-10   40.7   0.0     2    83    58   143    57   143 0.91 Acetyltransferase (GNAT) family
Acetyltransf_9       PF13527.1    127 sp|O34350|YTMI_BACSU -            178   4.8e-09   36.1   0.0   1   1     3e-12   8.9e-09   35.2   0.0     2   126     6   144     5   145 0.78 Acetyltransferase (GNAT) domain
Acetyltransf_10      PF13673.1    117 sp|O34350|YTMI_BACSU -            178     3e-08   33.7   0.0   1   1   1.3e-11   3.8e-08   33.4   0.0     1   117    13   142    13   142 0.75 Acetyltransferase (GNAT) domain
Acetyltransf_8       PF13523.1    152 sp|O34350|YTMI_BACSU -            178     0.081   12.7   0.0   1   1   3.4e-05       0.1   12.4   0.0     1   137     6   143     6   152 0.80 Acetyltransferase (GNAT) domain
Glutaredoxin         PF00462.19    60 sp|O34639|YTNI_BACSU -             93   4.1e-14   52.3   0.1   1   1   3.5e-17   5.7e-14   51.8   0.1     1    56     7    62     7    65 0.97 Glutaredoxin
DUF836               PF05768.9     81 sp|O34639|YTNI_BACSU -             93   3.7e-07   30.3   0.0   1   1   2.4e-10     4e-07   30.2   0.0     2    63     7    69     6    91 0.80 Glutaredoxin-like domain (DUF836)
GST_N_3              PF13417.1     75 sp|O34639|YTNI_BACSU -             93   1.2e-05   25.4   0.0   1   1   8.2e-09   1.4e-05   25.2   0.0     5    56    13    66     9    81 0.83 Glutathione S-transferase, N-terminal domain
Thioredoxin_3        PF13192.1     76 sp|O34639|YTNI_BACSU -             93   0.00034   20.3   0.1   1   1   3.6e-07    0.0006   19.5   0.1     1    56     5    62     5    75 0.73 Thioredoxin domain
ArsC                 PF03960.10   110 sp|O34639|YTNI_BACSU -             93    0.0096   15.9   0.0   1   1   6.1e-06      0.01   15.9   0.0     4    43    13    48    10    78 0.90 ArsC family
Thioredoxin_8        PF13905.1     95 sp|O34639|YTNI_BACSU -             93     0.035   14.2   0.0   1   1   2.7e-05     0.045   13.8   0.0    48    87    19    60     2    66 0.85 Thioredoxin-like
Thioredoxin_2        PF13098.1    112 sp|O34639|YTNI_BACSU -             93     0.042   14.0   0.1   1   1   0.00023      0.39   10.9   0.1     9    29     7    27     4    74 0.70 Thioredoxin-like domain
SH3BGR               PF04908.10    99 sp|O34639|YTNI_BACSU -             93     0.051   13.5   0.0   1   1   4.1e-05     0.067   13.1   0.0    21    53    19    51     8    70 0.87 SH3-binding, glutamic acid-rich protein
NIF                  PF03031.13   159 sp|O34639|YTNI_BACSU -             93     0.077   12.6   0.0   1   1   5.3e-05     0.087   12.4   0.0    49    92     2    45     1    61 0.85 NLI interacting factor-like phosphatase
AA_permease          PF00324.16   478 sp|O34618|YTNA_BACSU -            463  5.6e-118  394.3  47.0   1   1  8.9e-122  6.6e-118  394.0  47.0     1   466    16   445    16   457 0.95 Amino acid permease
AA_permease_2        PF13520.1    426 sp|O34618|YTNA_BACSU -            463   7.9e-48  163.0  49.2   1   1   1.3e-51   9.7e-48  162.7  49.2     7   422    18   441    12   445 0.85 Amino acid permease
Peptidase_M20        PF01546.23   189 sp|O34980|YTNL_BACSU -            416   1.2e-32  112.9   0.1   1   1   3.1e-36   1.5e-32  112.6   0.1     1   188    99   403    99   404 0.92 Peptidase family M20/M25/M40
M20_dimer            PF07687.9    112 sp|O34980|YTNL_BACSU -            416   2.5e-10   40.0   0.2   1   1   1.5e-13   7.2e-10   38.6   0.0     8   106   211   304   209   309 0.94 Peptidase dimerisation domain
TauE                 PF01925.14   240 sp|O34430|YTNM_BACSU -            300   5.7e-36  124.1  24.6   1   2   3.9e-40   5.7e-36  124.1  24.6     2   237     8   246     6   249 0.87 Sulfite exporter TauE/SafE
Lactamase_B          PF00753.22   194 sp|O34760|YTNP_BACSU -            281     2e-11   43.8   1.1   1   1     9e-15   4.4e-11   42.7   1.1    10   154    55   221    51   238 0.88 Metallo-beta-lactamase superfamily
Lactamase_B_2        PF12706.2    194 sp|O34760|YTNP_BACSU -            281   8.4e-05   22.1   0.3   1   1   2.3e-08   0.00011   21.7   0.3     2   140    62   215    61   268 0.55 Beta-lactamase superfamily domain
Lactamase_B_3        PF13483.1    163 sp|O34760|YTNP_BACSU -            281   0.00018   21.2   0.4   1   1   8.2e-08    0.0004   20.1   0.4    11   115    55   214    51   223 0.60 Beta-lactamase superfamily domain
Hexapep              PF00132.19    36 sp|O34696|YTOA_BACSU -            171     8e-20   69.4   5.0   1   4   1.6e-09   1.2e-05   24.6   0.1     4    36    12    44     9    44 0.95 Bacterial transferase hexapeptide (six repeats)
Hexapep              PF00132.19    36 sp|O34696|YTOA_BACSU -            171     8e-20   69.4   5.0   4   4   3.6e-13   2.7e-09   36.1   0.4     2    34    88   120    87   122 0.95 Bacterial transferase hexapeptide (six repeats)
Hexapep_2            PF14602.1     34 sp|O34696|YTOA_BACSU -            171   0.00014   21.3   7.3   3   4   3.5e-05      0.26   10.8   0.1     4    32    73   102    71   104 0.93 Hexapeptide repeat of succinyl-transferase
Hexapep_2            PF14602.1     34 sp|O34696|YTOA_BACSU -            171   0.00014   21.3   7.3   4   4   8.6e-07    0.0064   16.0   2.0     6    32    92   120    88   122 0.93 Hexapeptide repeat of succinyl-transferase
Peptidase_M42        PF05343.9    292 sp|O34924|YTOP_BACSU -            357    2e-112  374.7   0.0   1   1  3.2e-116  2.4e-112  374.4   0.0     1   292    46   337    46   337 0.99 M42 glutamyl aminopeptidase
Peptidase_M20        PF01546.23   189 sp|O34924|YTOP_BACSU -            357   9.1e-06   25.3   0.1   2   2   2.5e-09   1.8e-05   24.3   0.0    39   187   183   342   178   344 0.79 Peptidase family M20/M25/M40
DUF1444              PF07285.6    265 sp|O34496|YTPQ_BACSU -            269  2.1e-127  423.9   0.3   1   1  1.6e-131  2.3e-127  423.7   0.3     1   265     3   268     3   268 0.99 Protein of unknown function (DUF1444)
Radical_SAM          PF04055.16   166 sp|O35008|YTQA_BACSU -            322   1.1e-13   51.6   0.1   1   1   1.2e-17   1.9e-13   50.9   0.1     9   165    52   214    41   215 0.84 Radical SAM superfamily
rRNA_methylase       PF06962.7    140 sp|O34614|YTQB_BACSU -            194   8.5e-56  187.5   0.0   1   1   9.4e-59   1.1e-55  187.2   0.0     1   140    47   188    47   188 0.97 Putative rRNA methylase
Methyltransf_26      PF13659.1    117 sp|O34614|YTQB_BACSU -            194   2.1e-09   37.4   0.0   1   1   3.1e-12   3.6e-09   36.6   0.0     2   115    22   140    21   142 0.89 Methyltransferase domain
Methyltransf_5       PF01795.14   310 sp|O34614|YTQB_BACSU -            194   1.7e-08   34.1   0.1   1   2   7.4e-11   8.4e-08   31.8   0.0    19   102    19   103     6   104 0.83 MraW methylase family
Methyltransf_31      PF13847.1    152 sp|O34614|YTQB_BACSU -            194     3e-08   33.3   0.0   1   1     6e-11   6.8e-08   32.2   0.0     3   112    20   142    18   185 0.73 Methyltransferase domain
FtsJ                 PF01728.14   181 sp|O34614|YTQB_BACSU -            194   0.00029   20.8   0.0   1   1   5.1e-07   0.00058   19.9   0.0    20   142    17   148     5   173 0.67 FtsJ-like methyltransferase
Methyltransf_32      PF13679.1    141 sp|O34614|YTQB_BACSU -            194    0.0004   20.0   0.0   1   1   6.3e-07   0.00072   19.2   0.0    24    99    19    91     3   142 0.82 Methyltransferase domain
Methyltransf_25      PF13649.1    101 sp|O34614|YTQB_BACSU -            194   0.00067   19.9   0.0   1   1   9.1e-07     0.001   19.3   0.0     1    73    24   100    24   134 0.65 Methyltransferase domain
Methyltransf_18      PF12847.2    112 sp|O34614|YTQB_BACSU -            194    0.0014   19.2   0.0   1   1   1.9e-06    0.0021   18.6   0.0     5   109    24   138    20   141 0.76 Methyltransferase domain
Methyltransf_24      PF13578.1    106 sp|O34614|YTQB_BACSU -            194    0.0031   18.3   0.0   1   1   5.1e-06    0.0058   17.4   0.0     4   103    30   138    27   139 0.80 Methyltransferase domain
Methyltransf_11      PF08241.7     95 sp|O34614|YTQB_BACSU -            194     0.012   16.0   0.0   1   1     2e-05     0.023   15.1   0.0     2    42    26    68    25   101 0.87 Methyltransferase domain
Ubie_methyltran      PF01209.13   233 sp|O34614|YTQB_BACSU -            194     0.015   14.3   0.0   1   1   2.4e-05     0.027   13.5   0.0    43   105    16    78     9    99 0.85 ubiE/COQ5 methyltransferase family
Methyltransf_12      PF08242.7     99 sp|O34614|YTQB_BACSU -            194     0.025   15.0   0.0   1   1   3.4e-05     0.039   14.4   0.0     6    60    30    85    25   136 0.80 Methyltransferase domain
PCMT                 PF01135.14   210 sp|O34614|YTQB_BACSU -            194     0.071   12.6   0.0   1   1    0.0001      0.11   11.9   0.0    67   120    12    67     5    81 0.84 Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT)
ABC_tran             PF00005.22   137 sp|O34641|YTRB_BACSU -            292     8e-23   81.2   0.0   1   1   2.5e-25   2.6e-22   79.5   0.0     1   136    17   154    17   155 0.90 ABC transporter
AAA_21               PF13304.1    303 sp|O34641|YTRB_BACSU -            292   1.5e-09   38.2   0.7   1   2   4.2e-06    0.0045   17.0   0.1     3    28    31    77    29   118 0.63 AAA domain
AAA_21               PF13304.1    303 sp|O34641|YTRB_BACSU -            292   1.5e-09   38.2   0.7   2   2   3.7e-07    0.0004   20.4   0.0   190   297   114   185    67   188 0.72 AAA domain
AAA_23               PF13476.1    202 sp|O34641|YTRB_BACSU -            292   8.7e-05   22.9   1.2   1   1   1.4e-07   0.00015   22.1   1.2    10   119    17   122    11   273 0.62 AAA domain
SMC_N                PF02463.14   220 sp|O34641|YTRB_BACSU -            292   0.00039   19.7   0.4   1   1   7.6e-06    0.0081   15.4   0.4    26   212    29   200    11   207 0.76 RecF/RecN/SMC N terminal domain
AAA_29               PF13555.1     62 sp|O34641|YTRB_BACSU -            292    0.0053   16.2   0.1   1   1     1e-05     0.011   15.2   0.1    18    51    23    55    15    61 0.79 P-loop containing region of AAA domain
SbcCD_C              PF13558.1     90 sp|O34641|YTRB_BACSU -            292     0.027   14.4   0.1   1   1   9.2e-05     0.098   12.5   0.1    61    89   142   170    97   171 0.83 Putative exonuclease SbcCD, C subunit
Gtr1_RagA            PF04670.7    232 sp|O34641|YTRB_BACSU -            292     0.028   13.5   0.0   1   1   4.1e-05     0.044   12.9   0.0     4    77    32   100    30   191 0.81 Gtr1/RagA G protein conserved region
AAA_30               PF13604.1    196 sp|O34641|YTRB_BACSU -            292     0.031   13.8   0.0   1   1   5.7e-05      0.06   12.9   0.0    16    47    25    56    15    65 0.78 AAA domain
UPF0079              PF02367.12   123 sp|O34641|YTRB_BACSU -            292     0.045   13.3   0.1   1   1   9.7e-05       0.1   12.2   0.1     7    38    19    50    14    59 0.84 Uncharacterised P-loop hydrolase UPF0079
RNA_helicase         PF00910.17   107 sp|O34641|YTRB_BACSU -            292     0.059   13.5   0.0   1   1   0.00013      0.13   12.4   0.0     3    54    32    96    30   134 0.81 RNA helicase
DUF87                PF01935.12   229 sp|O34641|YTRB_BACSU -            292     0.069   12.9   1.1   1   1   0.00014      0.15   11.8   0.2    26    59    30    61    11    62 0.81 Domain of unknown function DUF87
AAA_13               PF13166.1    712 sp|O34641|YTRB_BACSU -            292     0.076   11.4   0.0   1   1   0.00012      0.13   10.7   0.0    23    41    34    52    28    77 0.83 AAA domain
AAA_16               PF13191.1    185 sp|O34641|YTRB_BACSU -            292     0.076   12.9   0.0   1   1   0.00015      0.16   11.9   0.0    23   103    26   129    14   206 0.57 AAA ATPase domain
AAA_17               PF13207.1    121 sp|O34641|YTRB_BACSU -            292     0.079   13.7   0.2   1   1    0.0005      0.53   11.1   0.2     4    64    32    88    29   267 0.82 AAA domain
ABC2_membrane_4      PF12730.2    232 sp|O34898|YTRC_BACSU -            328     6e-08   32.1  31.8   1   2     2e-11     6e-08   32.1  31.8    15   230    18   253     7   255 0.61 ABC-2 family transporter protein
ABC2_membrane_2      PF12679.2    277 sp|O34898|YTRC_BACSU -            328     1e-07   31.0  22.6   1   1   6.2e-11   1.9e-07   30.2  22.3    82   274    71   258    17   319 0.73 ABC-2 family transporter protein
Gly-zipper_Omp       PF13488.1     46 sp|O34898|YTRC_BACSU -            328      0.45   10.2   3.7   2   2   0.00019      0.55    9.9   0.2    12    36   291   315   287   324 0.88 Glycine zipper
ABC2_membrane_4      PF12730.2    232 sp|O34953|YTRD_BACSU -            325   3.2e-09   36.3  33.0   1   1   8.6e-13   3.2e-09   36.3  33.0     6   232     9   246     7   254 0.66 ABC-2 family transporter protein
ABC2_membrane_2      PF12679.2    277 sp|O34953|YTRD_BACSU -            325   1.2e-07   30.9  16.2   1   2   3.1e-11   1.2e-07   30.9  16.2    10   276    10   256     6   257 0.76 ABC-2 family transporter protein
CRPA                 PF05745.6    150 sp|O34953|YTRD_BACSU -            325      0.68    9.7   0.0   2   2   0.00018      0.68    9.7   0.0    84   118   221   255   214   269 0.78 Chlamydia 15 kDa cysteine-rich outer membrane protein (CRPA)
ABC2_membrane_5      PF13346.1    206 sp|O34953|YTRD_BACSU -            325       2.7    7.2  46.7   2   2   7.4e-06     0.028   13.7  26.6    34   203    60   254    50   257 0.73 ABC-2 family transporter protein
ABC_tran             PF00005.22   137 sp|O34392|YTRE_BACSU -            231   2.7e-37  128.1   0.0   1   1   7.1e-40   3.5e-37  127.7   0.0     1   136    25   173    25   174 0.94 ABC transporter
AAA_21               PF13304.1    303 sp|O34392|YTRE_BACSU -            231   1.5e-13   51.3   2.8   1   1   7.7e-12   3.8e-09   36.9   2.8     1   301    37   208    37   210 0.62 AAA domain
SMC_N                PF02463.14   220 sp|O34392|YTRE_BACSU -            231     5e-07   29.1   0.3   1   2   0.00061       0.3   10.2   0.1    24    45    35    56    25    67 0.81 RecF/RecN/SMC N terminal domain
SMC_N                PF02463.14   220 sp|O34392|YTRE_BACSU -            231     5e-07   29.1   0.3   2   2   4.6e-06    0.0023   17.2   0.0   119   205   122   212   102   221 0.82 RecF/RecN/SMC N terminal domain
AAA_15               PF13175.1    415 sp|O34392|YTRE_BACSU -            231   7.7e-06   25.2   0.3   1   2   0.00034      0.17   10.9   0.0    17    53    29    75    11   140 0.76 AAA ATPase domain
AAA_15               PF13175.1    415 sp|O34392|YTRE_BACSU -            231   7.7e-06   25.2   0.3   2   2   7.5e-05     0.037   13.0   0.1   371   411   165   205   149   209 0.91 AAA ATPase domain
AAA_16               PF13191.1    185 sp|O34392|YTRE_BACSU -            231   3.5e-05   23.8   0.5   1   1   2.6e-07   0.00013   22.0   0.5     4    63    17    75    16   209 0.73 AAA ATPase domain
DUF258               PF03193.11   161 sp|O34392|YTRE_BACSU -            231   0.00014   21.1   0.3   1   1     4e-07    0.0002   20.6   0.3    32    59    32    59     3   138 0.84 Protein of unknown function, DUF258
AAA_10               PF12846.2    304 sp|O34392|YTRE_BACSU -            231   0.00019   20.9   0.2   1   2   2.6e-06    0.0013   18.2   0.1     4    37    38    73    36    88 0.85 AAA-like domain
AAA_29               PF13555.1     62 sp|O34392|YTRE_BACSU -            231   0.00022   20.6   0.2   1   1     9e-07   0.00044   19.7   0.2    20    48    33    60    25    71 0.75 P-loop containing region of AAA domain
AAA_25               PF13481.1    194 sp|O34392|YTRE_BACSU -            231   0.00058   19.3   0.0   1   2     1e-05     0.005   16.2   0.0    30    59    32    69    15    84 0.73 AAA domain
MMR_HSR1             PF01926.18   116 sp|O34392|YTRE_BACSU -            231    0.0012   18.8   0.7   1   1   4.5e-06    0.0022   17.9   0.7     2    21    38    57    37   210 0.78 50S ribosome-binding GTPase
ATP-synt_ab          PF00006.20   215 sp|O34392|YTRE_BACSU -            231     0.002   17.6   0.0   1   1     5e-06    0.0025   17.3   0.0     7    49    27   119    24   211 0.67 ATP synthase alpha/beta family, nucleotide-binding domain
Dynamin_N            PF00350.18   168 sp|O34392|YTRE_BACSU -            231    0.0028   17.4   0.3   1   2   0.00084      0.42   10.4   0.1     3    20    40    57    38    69 0.84 Dynamin family
AAA_22               PF13401.1    131 sp|O34392|YTRE_BACSU -            231    0.0031   17.6   1.0   1   2   0.00024      0.12   12.5   0.2     4    22    35    53    31    73 0.91 AAA domain
AAA_17               PF13207.1    121 sp|O34392|YTRE_BACSU -            231    0.0039   17.9   0.2   1   1     2e-05    0.0097   16.7   0.1     3    21    39    57    37    91 0.83 AAA domain
AAA_23               PF13476.1    202 sp|O34392|YTRE_BACSU -            231    0.0047   17.2   0.4   1   1   1.3e-05    0.0067   16.7   0.4    13    43    28    59    23   198 0.77 AAA domain
T2SE                 PF00437.15   272 sp|O34392|YTRE_BACSU -            231    0.0065   15.4   0.2   1   1   2.7e-05     0.013   14.3   0.2   124   161    31    68    13    70 0.87 Type II/IV secretion system protein
AAA_30               PF13604.1    196 sp|O34392|YTRE_BACSU -            231     0.008   15.7   0.1   1   1   4.6e-05     0.023   14.2   0.0    17    51    34    68    27    78 0.82 AAA domain
G-alpha              PF00503.15   389 sp|O34392|YTRE_BACSU -            231    0.0093   14.6   0.0   1   1   2.4e-05     0.012   14.3   0.0    63   181    40   201    32   220 0.75 G-protein alpha subunit
ABC_ATPase           PF09818.4    448 sp|O34392|YTRE_BACSU -            231     0.026   13.1   0.0   1   2   0.00031      0.15   10.5   0.0   240   264    30    55    18    61 0.86 Predicted ATPase of the ABC class
NACHT                PF05729.7    166 sp|O34392|YTRE_BACSU -            231     0.027   14.1   0.1   1   2   0.00046      0.23   11.1   0.0     3    20    38    55    36    62 0.87 NACHT domain
MobB                 PF03205.9    140 sp|O34392|YTRE_BACSU -            231     0.055   13.1   0.1   1   1   0.00029      0.14   11.8   0.1     2    27    37    62    36    78 0.78 Molybdopterin guanine dinucleotide synthesis protein B
Zeta_toxin           PF06414.7    201 sp|O34392|YTRE_BACSU -            231     0.063   12.3   0.0   1   1   0.00023      0.11   11.5   0.0    19    52    38    72    25    79 0.85 Zeta toxin
AAA_18               PF13238.1    129 sp|O34392|YTRE_BACSU -            231     0.079   13.2   0.5   1   1   0.00027      0.13   12.5   0.5     2    20    39    57    39   209 0.90 AAA domain
FtsK_SpoIIIE         PF01580.13   205 sp|O34392|YTRE_BACSU -            231     0.095   12.1   0.1   1   1   0.00046      0.23   10.9   0.1    35    56    32    53    12    60 0.81 FtsK/SpoIIIE family
SbcCD_C              PF13558.1     90 sp|O34392|YTRE_BACSU -            231      0.11   12.4   0.1   1   1    0.0016      0.78    9.6   0.1    63    89   163   189   126   190 0.81 Putative exonuclease SbcCD, C subunit
Arch_ATPase          PF01637.13   234 sp|O34392|YTRE_BACSU -            231      0.13   11.8   0.1   1   1   0.00043      0.21   11.2   0.1    18    42    33    57    17   220 0.84 Archaeal ATPase
DUF87                PF01935.12   229 sp|O34392|YTRE_BACSU -            231      0.17   11.7   1.2   1   1   0.00043      0.21   11.3   0.5    27    57    39    68    13    75 0.85 Domain of unknown function DUF87
FtsX                 PF02687.16   121 sp|O35005|YTRF_BACSU -            436   4.9e-21   74.7  12.0   2   2   6.6e-25   4.9e-21   74.7  12.0     2   120   299   427   298   428 0.93 FtsX-like permease family
MacB_PCD             PF12704.2    232 sp|O35005|YTRF_BACSU -            436   4.5e-19   68.9   2.6   1   2   6.1e-23   4.5e-19   68.9   2.6     3   230    12   270    11   272 0.78 MacB-like periplasmic core domain
GAF_2                PF13185.1    148 sp|O34553|YTSP_BACSU -            163   7.9e-13   49.1   0.0   1   1   1.9e-16   9.5e-13   48.8   0.0    20   147    49   161    27   162 0.79 GAF domain
GAF                  PF01590.21   154 sp|O34553|YTSP_BACSU -            163   3.4e-06   27.2   0.0   1   1   7.5e-10   3.7e-06   27.1   0.0    51   154    78   161    25   161 0.86 GAF domain
GAF_3                PF13492.1    129 sp|O34553|YTSP_BACSU -            163   3.7e-06   27.0   0.0   1   1   9.1e-10   4.5e-06   26.7   0.0    20   128    51   162    29   163 0.75 GAF domain
MFS_1                PF07690.11   352 sp|O34546|YTTB_BACSU -            397   1.1e-44  152.6  50.9   1   2   7.4e-29   2.7e-25   88.8  38.3     1   270     8   265     8   266 0.83 Major Facilitator Superfamily
MFS_1                PF07690.11   352 sp|O34546|YTTB_BACSU -            397   1.1e-44  152.6  50.9   2   2   8.1e-25     3e-21   75.5  15.2     5   185   215   391   208   395 0.86 Major Facilitator Superfamily
MFS_2                PF13347.1    428 sp|O34546|YTTB_BACSU -            397   1.2e-06   27.1  42.2   1   2   1.3e-06    0.0049   15.3  13.0   225   343     3   120     2   153 0.83 MFS/sugar transport protein
MFS_2                PF13347.1    428 sp|O34546|YTTB_BACSU -            397   1.2e-06   27.1  42.2   2   2   1.7e-06    0.0064   14.9  24.1   165   344   144   322   127   379 0.80 MFS/sugar transport protein
G_glu_transpept      PF01019.16   510 sp|O34546|YTTB_BACSU -            397      0.11   10.9   0.0   1   1   4.4e-05      0.16   10.3   0.0   142   182   294   334   283   340 0.89 Gamma-glutamyltranspeptidase
Membralin            PF09746.4    375 sp|O34546|YTTB_BACSU -            397       0.3   10.0   3.2   1   1   3.2e-05      0.12   11.4   0.3   272   350   263   340   253   348 0.81 Tumour-associated protein
UPF0118              PF01594.11   327 sp|O34991|YTVI_BACSU -            371   4.8e-83  278.8  38.3   1   1   3.7e-87   5.6e-83  278.6  38.3     2   325    14   356    13   358 0.99 Domain of unknown function DUF20
DUF441               PF04284.8    140 sp|O34811|YTWI_BACSU -            154   5.6e-52  175.3  18.7   1   1   8.7e-56   6.4e-52  175.1  18.7     1   140     7   146     7   146 0.99 Protein of unknown function (DUF441)
DUF4149              PF13664.1    101 sp|O34811|YTWI_BACSU -            154       1.6    8.7  10.7   2   2   1.2e-05     0.088   12.8   1.7     4    92    51   137    49   139 0.80 Domain of unknown function (DUF4149)
SNARE_assoc          PF09335.6    123 sp|P06568|YTXB_BACSU -            213   3.1e-24   85.5   5.4   2   2   2.1e-28   3.1e-24   85.5   5.4     1   122    61   174    61   175 0.92 SNARE associated Golgi protein
MotA_ExbB            PF01618.11   139 sp|P39063|YTXD_BACSU -            272   3.4e-14   52.6   0.0   1   1   7.8e-18   5.8e-14   51.9   0.0     9   129   103   218    95   227 0.89 MotA/TolQ/ExbB proton channel family
OmpA                 PF00691.15    97 sp|P39064|YTXE_BACSU -            242     7e-18   64.8   0.7   2   2     9e-21   3.3e-17   62.6   0.0     1    97   129   228   129   228 0.94 OmpA family
MotB_plug            PF13677.1     58 sp|P39064|YTXE_BACSU -            242   1.4e-15   56.3   0.0   1   1   9.5e-19   3.5e-15   55.0   0.0     6    56    12    63     4    65 0.85 Membrane MotB of proton-channel complex MotA/MotB
ExbD                 PF02472.11   130 sp|P39064|YTXE_BACSU -            242     0.068   13.1   7.9   1   1   6.4e-05      0.24   11.4   7.9     3    90    18   106    16   242 0.80 Biopolymer transport protein ExbD/TolR
SID-1_RNA_chan       PF13965.1    570 sp|P39064|YTXE_BACSU -            242     0.093   10.8   3.4   1   2   7.2e-06     0.027   12.6   0.4   114   220    16   118     3   132 0.54 dsRNA-gated channel SID-1
DUF948               PF06103.6     90 sp|P40779|YTXG_BACSU -            140   9.4e-33  111.9   4.1   1   1   1.6e-35   9.4e-33  111.9   4.1     1    90     7    96     7    96 0.99 Bacterial protein of unknown function (DUF948)
MCPsignal            PF00015.16   213 sp|P40779|YTXG_BACSU -            140   0.00081   18.9   3.7   1   1   1.9e-06    0.0011   18.4   3.7    98   185    37   125    19   138 0.50 Methyl-accepting chemotaxis protein (MCP) signalling domain
Apolipoprotein       PF01442.13   202 sp|P40779|YTXG_BACSU -            140     0.001   18.6   3.0   1   1   7.8e-06    0.0046   16.4   2.8     2    99    29   120    28   127 0.88 Apolipoprotein A1/A4/E domain
Laminin_II           PF06009.7    138 sp|P40779|YTXG_BACSU -            140    0.0019   17.9   4.1   1   1   1.6e-05    0.0094   15.7   3.9     9    62    52   105    21   120 0.77 Laminin Domain II
IncA                 PF04156.9    191 sp|P40779|YTXG_BACSU -            140    0.0023   17.5   3.7   1   1   5.2e-06    0.0031   17.1   3.7    36   126     2    84     1   138 0.48 IncA protein
Laminin_I            PF06008.9    264 sp|P40779|YTXG_BACSU -            140     0.003   16.9   4.6   1   1   7.5e-06    0.0045   16.3   4.6    29   115    23   109    18   137 0.85 Laminin Domain I
Reo_sigmaC           PF04582.7    326 sp|P40779|YTXG_BACSU -            140    0.0042   16.3   1.6   1   1   9.9e-06    0.0059   15.8   1.6    56   137    25   106    11   133 0.39 Reovirus sigma C capsid protein
RmuC                 PF02646.11   305 sp|P40779|YTXG_BACSU -            140    0.0049   15.7   2.0   1   1   1.2e-05    0.0072   15.1   2.0   219   302    27   115    16   131 0.78 RmuC family
DUF4446              PF14584.1    152 sp|P40779|YTXG_BACSU -            140    0.0061   16.4   1.9   1   1     1e-05    0.0061   16.4   1.9     4    84     4    83     1   108 0.73 Protein of unknown function (DUF4446)
DUF3407              PF11887.3    267 sp|P40779|YTXG_BACSU -            140    0.0087   15.3   0.5   1   1   2.1e-05     0.012   14.8   0.5    14   100    29   119    23   135 0.77 Protein of unknown function (DUF3407)
GAS                  PF13851.1    201 sp|P40779|YTXG_BACSU -            140     0.012   14.8   2.4   1   1     4e-05     0.024   13.8   2.0    94   148    26    80    22   118 0.71 Growth-arrest specific micro-tubule binding
DUF2580              PF10824.3    100 sp|P40779|YTXG_BACSU -            140     0.023   15.0   1.3   1   1   0.00012     0.073   13.4   1.2    17    93    60   135    52   140 0.82 Protein of unknown function (DUF2580)
Syntaxin-6_N         PF09177.6     97 sp|P40779|YTXG_BACSU -            140     0.032   14.6   1.4   1   1   7.4e-05     0.044   14.1   0.9    13    96    37   118    24   119 0.75 Syntaxin 6, N-terminal
Seryl_tRNA_N         PF02403.17   108 sp|P40779|YTXG_BACSU -            140     0.041   13.8   3.4   1   1   6.8e-05      0.04   13.9   1.5    29    88    39   102    23   121 0.70 Seryl-tRNA synthetase N-terminal domain
UPF0118              PF01594.11   327 sp|P40779|YTXG_BACSU -            140     0.054   12.4   2.0   1   1   0.00011     0.067   12.1   2.0    52   124     3    72     1   128 0.71 Domain of unknown function DUF20
COG5                 PF10392.4    132 sp|P40779|YTXG_BACSU -            140      0.06   13.3   1.3   1   1   0.00018      0.11   12.4   0.7    54   112    28    86    21    97 0.80 Golgi transport complex subunit 5
DUF3858              PF12970.2    116 sp|P40779|YTXG_BACSU -            140     0.062   13.0   0.2   1   1   0.00019      0.12   12.2   0.1    36    81    73   118    60   123 0.89 Domain of Unknown Function with PDB structure (DUF3858)
ADIP                 PF11559.3    151 sp|P40779|YTXG_BACSU -            140     0.072   12.9   3.0   1   1   0.00017       0.1   12.4   2.8    57   132    23    98    22   118 0.87 Afadin- and alpha -actinin-Binding
DUF972               PF06156.8    107 sp|P40779|YTXG_BACSU -            140      0.15   12.4   4.5   1   1   0.00081      0.48   10.7   4.5     6    58    23    84    21   139 0.77 Protein of unknown function (DUF972)
Cluap1               PF10234.4    267 sp|P40779|YTXG_BACSU -            140      0.23   10.6   7.5   1   2   0.00018      0.11   11.7   1.3   161   216    24    79    18    85 0.92 Clusterin-associated protein-1
H-kinase_dim         PF02895.9     68 sp|P40779|YTXG_BACSU -            140      0.25   11.6   2.8   1   2    0.0012      0.68   10.3   0.5    36    64    38    72    22    76 0.77 Signal transducing histidine kinase, homodimeric domain
HAMP                 PF00672.20    70 sp|P40779|YTXG_BACSU -            140      0.27   11.4   1.7   1   1   0.00072      0.43   10.8   1.0     3    40     3    40     1    71 0.64 HAMP domain
FxsA                 PF04186.8    120 sp|O32064|YTZA_BACSU -            127     3e-37  126.8   2.8   1   1     5e-41   3.7e-37  126.5   2.8     1   115     5   119     5   124 0.96 FxsA cytoplasmic membrane protein
ATP_synt_I           PF03899.10   100 sp|O32064|YTZA_BACSU -            127   0.00048   20.2   1.2   1   2   6.5e-08   0.00048   20.2   1.2    12    62     3    53     1    59 0.86 ATP synthase I chain
PseudoU_synth_2      PF00849.17   164 sp|O32068|YTZG_BACSU -            239   3.3e-18   66.0   0.0   1   1   2.1e-21   1.5e-17   63.8   0.0     2   163    62   195    61   196 0.86 RNA pseudouridylate synthase
S4                   PF01479.20    48 sp|O32068|YTZG_BACSU -            239   8.7e-12   44.2   0.0   1   1   2.5e-15   1.8e-11   43.2   0.0     1    45     1    44     1    46 0.96 S4 domain
Acetyltransf_1       PF00583.19    83 sp|O32075|YUAI_BACSU -            173   6.9e-11   42.0   0.0   1   1   2.9e-14   1.1e-10   41.4   0.0     3    79    62   136    60   138 0.94 Acetyltransferase (GNAT) family
Acetyltransf_10      PF13673.1    117 sp|O32075|YUAI_BACSU -            173   3.5e-08   33.5   0.0   1   1   1.3e-11   4.8e-08   33.1   0.0     1   113    11   135    11   138 0.73 Acetyltransferase (GNAT) domain
FR47                 PF08445.5     86 sp|O32075|YUAI_BACSU -            173   2.1e-06   27.3   0.0   1   1   9.8e-10   3.6e-06   26.6   0.0    20    73    82   135    77   143 0.95 FR47-like protein
Acetyltransf_7       PF13508.1     79 sp|O32075|YUAI_BACSU -            173    0.0035   17.4   0.1   1   1   1.7e-06    0.0062   16.6   0.1     5    73    57   135    53   138 0.74 Acetyltransferase (GNAT) domain
UPF0118              PF01594.11   327 sp|O32086|YUBA_BACSU -            388   1.2e-86  290.7  42.8   1   1   2.1e-90   1.6e-86  290.3  42.8     2   325    32   363    31   365 0.97 Domain of unknown function DUF20
Rifin_STEVOR         PF02009.11   299 sp|O32086|YUBA_BACSU -            388     0.046   13.3   0.3   1   1   6.1e-06     0.046   13.3   0.3   217   284   135   202   110   203 0.87 Rifin/stevor family
MFS_1                PF07690.11   352 sp|O32084|YUBD_BACSU -            511   5.1e-26   91.2  47.9   1   2   6.9e-30   5.1e-26   91.2  47.9    45   318    55   375    11   412 0.79 Major Facilitator Superfamily
CcmD                 PF04995.9     46 sp|O32084|YUBD_BACSU -            511      0.11   12.2   1.5   1   1     9e-05      0.67    9.7   1.5     5    23   227   245   226   247 0.93 Heme exporter protein D (CcmD)
UPF0118              PF01594.11   327 sp|O32095|YUEF_BACSU -            369   3.3e-91  305.6  43.5   1   1   7.9e-95   3.9e-91  305.4  43.5     2   325    18   348    17   350 0.98 Domain of unknown function DUF20
Baculo_PEP_C         PF04513.7    140 sp|O32095|YUEF_BACSU -            369     0.012   15.4   0.3   1   1   4.5e-06     0.022   14.5   0.3    36    98    93   168    81   176 0.60 Baculovirus polyhedron envelope protein, PEP, C terminus
CHD5                 PF04420.9    161 sp|O32095|YUEF_BACSU -            369       4.8    6.8   9.3   2   2   0.00012      0.59    9.7   0.1    77   133   141   197    73   202 0.89 CHD5-like protein
gerPA                PF10676.4     73 sp|O32094|YUEG_BACSU -             73     6e-28   96.4   2.3   1   1   4.4e-32   6.6e-28   96.3   2.3     1    72     1    72     1    73 0.99 Spore germination protein gerPA/gerPF
Bmp                  PF02608.9    306 sp|O05252|YUFN_BACSU -            359  2.7e-101  338.3  14.3   1   1  4.2e-105  3.1e-101  338.1  14.3     2   306    40   350    39   350 0.98 Basic membrane protein
Peripla_BP_3         PF13377.1    160 sp|O05252|YUFN_BACSU -            359      0.17   11.9   0.0   1   1   4.8e-05      0.35   10.8   0.0    11   109   166   265   163   280 0.83 Periplasmic binding protein-like domain
ABC_tran             PF00005.22   137 sp|O05253|YUFO_BACSU -            510   2.9e-51  173.3   0.2   1   2   2.9e-33   3.9e-30  104.9   0.0     2   137    21   169    20   169 0.96 ABC transporter
ABC_tran             PF00005.22   137 sp|O05253|YUFO_BACSU -            510   2.9e-51  173.3   0.2   2   2   2.2e-21   2.9e-18   66.4   0.0     2   136   274   429   273   430 0.84 ABC transporter
AAA_21               PF13304.1    303 sp|O05253|YUFO_BACSU -            510   1.4e-12   48.2   0.2   1   1     9e-14   1.2e-10   41.8   0.2     2   297    33   198    32   199 0.79 AAA domain
AAA_15               PF13175.1    415 sp|O05253|YUFO_BACSU -            510   3.7e-06   26.2   3.9   1   3   0.00011      0.15   11.0   0.1    17    43    22    59     5   139 0.73 AAA ATPase domain
AAA_15               PF13175.1    415 sp|O05253|YUFO_BACSU -            510   3.7e-06   26.2   3.9   2   3   9.7e-06     0.013   14.5   0.1   359   410   154   198   144   201 0.87 AAA ATPase domain
DUF258               PF03193.11   161 sp|O05253|YUFO_BACSU -            510   9.2e-06   24.9   0.3   1   2   4.1e-07   0.00055   19.1   0.0    29    69    23    64     9    79 0.87 Protein of unknown function, DUF258
SMC_N                PF02463.14   220 sp|O05253|YUFO_BACSU -            510   1.4e-05   24.4   1.7   1   3   1.8e-05     0.024   13.8   0.1    25    88    31    93    17   131 0.78 RecF/RecN/SMC N terminal domain
AAA_29               PF13555.1     62 sp|O05253|YUFO_BACSU -            510   6.2e-05   22.4   0.2   1   2   1.4e-06    0.0019   17.6   0.0    19    41    27    48    19    62 0.81 P-loop containing region of AAA domain
MMR_HSR1             PF01926.18   116 sp|O05253|YUFO_BACSU -            510   0.00098   19.0   0.4   1   2   1.4e-05     0.019   14.9   0.1     3    57    34   112    33   199 0.47 50S ribosome-binding GTPase
Bac_DnaA             PF00308.13   219 sp|O05253|YUFO_BACSU -            510    0.0021   17.7   0.6   1   1   3.4e-06    0.0046   16.6   0.1    84   160   145   220   136   271 0.77 Bacterial dnaA  protein
AAA_23               PF13476.1    202 sp|O05253|YUFO_BACSU -            510     0.004   17.5   0.7   1   1   6.7e-06     0.009   16.3   0.7    12    40    20    51     5   331 0.78 AAA domain
AAA_10               PF12846.2    304 sp|O05253|YUFO_BACSU -            510     0.005   16.3   0.0   1   2   0.00018      0.24   10.7   0.0     5    25    34    54    32    67 0.79 AAA-like domain
AAA_22               PF13401.1    131 sp|O05253|YUFO_BACSU -            510    0.0064   16.6   0.2   1   1   6.9e-05     0.093   12.8   0.2     5   113    31   184    27   204 0.50 AAA domain
BPD_transp_2         PF02653.11   267 sp|O05254|YUFP_BACSU -            348   5.1e-48  163.3  27.0   2   2   3.4e-52   5.1e-48  163.3  27.0     4   266    53   329    50   330 0.88 Branched-chain amino acid transport system / permease component
BPD_transp_2         PF02653.11   267 sp|O05255|YUFQ_BACSU -            319     1e-40  139.4  31.9   1   1   1.6e-44   1.2e-40  139.1  31.9     5   266    14   296    10   297 0.87 Branched-chain amino acid transport system / permease component
Secretin             PF00263.16   165 sp|O05255|YUFQ_BACSU -            319     0.006   15.9   0.0   1   2   3.2e-06     0.024   14.0   0.0   127   145   134   152   132   157 0.89 Bacterial type II and III secretion system protein
Abhydrolase_6        PF12697.2    228 sp|O05235|YUGF_BACSU -            273   1.6e-40  139.3   0.0   1   1   2.7e-43     2e-40  139.0   0.0     1   227    30   266    30   267 0.80 Alpha/beta hydrolase family
Abhydrolase_1        PF00561.15   230 sp|O05235|YUGF_BACSU -            273   8.4e-26   90.9   0.0   1   2   5.8e-19   4.3e-16   59.1   0.0     1    78    54   128    54   205 0.86 alpha/beta hydrolase fold
Abhydrolase_1        PF00561.15   230 sp|O05235|YUGF_BACSU -            273   8.4e-26   90.9   0.0   2   2   3.9e-10   2.9e-07   30.2   0.0   168   229   208   269   182   270 0.91 alpha/beta hydrolase fold
Abhydrolase_5        PF12695.2    145 sp|O05235|YUGF_BACSU -            273     2e-16   60.0   0.0   1   1   1.6e-18   1.2e-15   57.5   0.0     1   138    29   248    29   255 0.75 Alpha/beta hydrolase family
Esterase             PF00756.15   251 sp|O05235|YUGF_BACSU -            273   9.4e-08   31.7   0.0   1   1   1.5e-10   1.1e-07   31.5   0.0   100   153    78   134    57   225 0.79 Putative esterase
Thioesterase         PF00975.15   229 sp|O05235|YUGF_BACSU -            273   1.6e-07   31.8   0.0   1   2   1.4e-09     1e-06   29.1   0.0     1    86    28   114    28   124 0.94 Thioesterase domain
Peptidase_S9         PF00326.16   213 sp|O05235|YUGF_BACSU -            273   5.6e-07   28.9   0.0   1   2   1.7e-05     0.012   14.8   0.0    64    96    94   126    79   143 0.86 Prolyl oligopeptidase family
Peptidase_S9         PF00326.16   213 sp|O05235|YUGF_BACSU -            273   5.6e-07   28.9   0.0   2   2   0.00011     0.079   12.1   0.0    94   170   156   241   151   268 0.81 Prolyl oligopeptidase family
Abhydrolase_2        PF02230.11   216 sp|O05235|YUGF_BACSU -            273   6.6e-07   28.9   0.0   1   2   6.9e-06    0.0051   16.2   0.0   102   211    91   198    54   203 0.72 Phospholipase/Carboxylesterase
Abhydrolase_2        PF02230.11   216 sp|O05235|YUGF_BACSU -            273   6.6e-07   28.9   0.0   2   2   0.00038      0.28   10.5   0.0   151   212   212   268   204   272 0.71 Phospholipase/Carboxylesterase
Ndr                  PF03096.9    283 sp|O05235|YUGF_BACSU -            273   4.7e-05   22.0   0.0   1   1   1.1e-07   8.3e-05   21.1   0.0    65   277    65   273    26   273 0.77 Ndr family
FSH1                 PF03959.8    212 sp|O05235|YUGF_BACSU -            273   0.00015   21.3   0.0   2   2   1.1e-05    0.0078   15.6   0.0   157   208   211   262    68   265 0.80 Serine hydrolase (FSH1)
Hydrolase_4          PF12146.3     79 sp|O05235|YUGF_BACSU -            273   0.00015   21.5   0.0   1   2   2.2e-06    0.0016   18.2   0.0     1    69    14    79    14    89 0.86 Putative lysophospholipase
PGAP1                PF07819.8    225 sp|O05235|YUGF_BACSU -            273   0.00031   20.3   0.0   1   1   5.2e-07   0.00038   20.1   0.0    41   107    55   116    25   167 0.82 PGAP1-like protein
Abhydrolase_4        PF08386.5    103 sp|O05235|YUGF_BACSU -            273   0.00064   19.5   0.0   1   1   1.3e-06   0.00098   18.9   0.0    26    91   208   272   194   273 0.83 TAP-like protein
DUF1057              PF06342.7    297 sp|O05235|YUGF_BACSU -            273    0.0061   15.4   0.0   1   1   1.3e-05    0.0096   14.7   0.0    36   141    28   133     8   237 0.78 Alpha/beta hydrolase of unknown function (DUF1057)
Lipase_3             PF01764.20   141 sp|O05235|YUGF_BACSU -            273      0.01   15.4   0.0   1   1   1.9e-05     0.014   15.0   0.0    45    84    75   114    13   171 0.75 Lipase (class 3)
DUF676               PF05057.9    219 sp|O05235|YUGF_BACSU -            273     0.022   14.0   0.1   1   1   8.8e-05     0.065   12.5   0.1     8    97    30   112    25   124 0.72 Putative serine esterase (DUF676)
LCAT                 PF02450.10   389 sp|O05235|YUGF_BACSU -            273     0.028   13.4   0.1   1   1   5.7e-05     0.042   12.8   0.1   107   134    82   109    74   118 0.79 Lecithin:cholesterol acyltransferase
DUF915               PF06028.6    255 sp|O05235|YUGF_BACSU -            273     0.087   11.8   0.0   1   1   0.00041      0.31   10.1   0.1    93   116    84   107    66   114 0.76 Alpha/beta hydrolase of unknown function (DUF915)
DUF900               PF05990.7    234 sp|O05235|YUGF_BACSU -            273     0.094   12.0   0.2   1   1   0.00047      0.35   10.1   0.2    36   111    40   111    15   116 0.68 Alpha/beta hydrolase of unknown function (DUF900)
Aminotran_1_2        PF00155.16   363 sp|Q795M6|YUGH_BACSU -            386   3.4e-70  236.8   0.0   1   1   2.4e-73   3.9e-70  236.6   0.0     2   361    29   376    28   378 0.95 Aminotransferase class I and II
DegT_DnrJ_EryC1      PF01041.12   363 sp|Q795M6|YUGH_BACSU -            386   1.2e-11   44.3   0.2   1   1   1.3e-14   2.2e-11   43.4   0.2    45   146    94   201    73   205 0.88 DegT/DnrJ/EryC1/StrS aminotransferase family
Beta_elim_lyase      PF01212.16   290 sp|Q795M6|YUGH_BACSU -            386   5.4e-10   38.8   0.0   1   1   5.6e-13   9.1e-10   38.1   0.0     9   164    44   201    39   202 0.81 Beta-eliminating lyase
Cys_Met_Meta_PP      PF01053.15   386 sp|Q795M6|YUGH_BACSU -            386   3.1e-09   35.6   0.1   1   2   5.3e-12   8.8e-09   34.1   0.0    76   180    94   204    46   209 0.84 Cys/Met metabolism PLP-dependent enzyme
Aminotran_5          PF00266.14   371 sp|Q795M6|YUGH_BACSU -            386   3.8e-08   32.4   0.0   1   2   6.2e-11     1e-07   31.0   0.0    59   175    87   201    47   206 0.82 Aminotransferase class-V
OKR_DC_1             PF01276.15   417 sp|Q795M6|YUGH_BACSU -            386    0.0003   19.4   0.0   1   1   2.6e-07   0.00043   18.9   0.0    79   138    86   145    77   212 0.88 Orn/Lys/Arg decarboxylase, major domain
SelA                 PF03841.8    367 sp|Q795M6|YUGH_BACSU -            386    0.0019   17.0   0.0   1   1   1.8e-06    0.0029   16.4   0.0   123   176   149   201   110   209 0.85 L-seryl-tRNA selenium transferase
Aminotran_MocR       PF12897.2    425 sp|Q795M6|YUGH_BACSU -            386    0.0053   15.3   0.1   1   1   4.1e-06    0.0068   15.0   0.1   165   267   155   248   109   291 0.75 Alanine-glyoxylate amino-transferase
Glyco_hydro_20       PF00728.17   351 sp|Q795M6|YUGH_BACSU -            386     0.035   13.2   0.0   1   1   3.5e-05     0.057   12.5   0.0    36    90   139   199   137   202 0.72 Glycosyl hydrolase family 20, catalytic domain
Fe-ADH               PF00465.14   366 sp|O05239|YUGJ_BACSU -            387  2.9e-103  345.3   0.0   1   1  6.6e-107  3.3e-103  345.1   0.0     1   366     9   379     9   379 0.94 Iron-containing alcohol dehydrogenase
Fe-ADH_2             PF13685.1    250 sp|O05239|YUGJ_BACSU -            387   7.5e-18   64.7   0.0   1   2   1.4e-14   6.8e-11   41.9   0.0     2    98    14   111    13   114 0.91 Iron-containing alcohol dehydrogenase
Fe-ADH_2             PF13685.1    250 sp|O05239|YUGJ_BACSU -            387   7.5e-18   64.7   0.0   2   2   3.7e-08   0.00018   20.8   0.0    97   240   128   277   115   285 0.81 Iron-containing alcohol dehydrogenase
2OG-FeII_Oxy_5       PF13759.1    101 sp|O05239|YUGJ_BACSU -            387     0.031   14.5   0.0   1   1   1.4e-05     0.072   13.3   0.0    54    91   265   302   245   310 0.78 Putative 2OG-Fe(II) oxygenase
Fe-ADH               PF00465.14   366 sp|O05240|YUGK_BACSU -            390   2.3e-97  325.9   0.0   1   1  3.4e-101   2.5e-97  325.7   0.0     1   366     9   382     9   382 0.94 Iron-containing alcohol dehydrogenase
Fe-ADH_2             PF13685.1    250 sp|O05240|YUGK_BACSU -            390   3.7e-16   59.1   0.0   1   2   6.4e-14   4.7e-10   39.1   0.0     2    98    14   111    13   114 0.91 Iron-containing alcohol dehydrogenase
Fe-ADH_2             PF13685.1    250 sp|O05240|YUGK_BACSU -            390   3.7e-16   59.1   0.0   2   2   1.7e-07    0.0013   18.1   0.0    91   238   122   279   115   286 0.81 Iron-containing alcohol dehydrogenase
DUF21                PF01595.15   183 sp|O05241|YUGS_BACSU -            429   1.6e-52  177.4   5.3   1   1     7e-56   2.6e-52  176.7   5.3     1   183     4   201     4   201 0.99 Domain of unknown function DUF21
CBS                  PF00571.23    57 sp|O05241|YUGS_BACSU -            429   5.8e-20   70.8   1.9   1   2   3.2e-12   1.2e-08   34.5   0.0     1    54   216   272   216   274 0.93 CBS domain
CBS                  PF00571.23    57 sp|O05241|YUGS_BACSU -            429   5.8e-20   70.8   1.9   2   2     2e-12   7.5e-09   35.2   0.5     3    56   283   335   281   336 0.96 CBS domain
CorC_HlyC            PF03471.12    81 sp|O05241|YUGS_BACSU -            429   1.7e-16   59.7   0.3   1   1   1.5e-19   5.5e-16   58.1   0.3     2    80   352   427   351   428 0.93 Transporter associated domain
Colicin_V            PF02674.11   146 sp|O05241|YUGS_BACSU -            429     0.046   13.5   0.6   2   2   1.2e-05     0.046   13.5   0.6    24    95    60   133    58   139 0.86 Colicin V production protein
UPF0047              PF01894.12   118 sp|O05243|YUGU_BACSU -            132   2.2e-40  137.1   0.0   1   1   3.5e-44   2.6e-40  136.9   0.0     1   118    16   131    16   131 0.95 Uncharacterised protein family UPF0047
SCP1201-deam         PF14428.1    136 sp|O05243|YUGU_BACSU -            132     0.061   13.0   0.1   1   1   1.1e-05     0.079   12.6   0.1    46    89    52    99    15   104 0.74 SCP1.201-like deaminase
YukC                 PF10140.4    359 sp|P71070|YUKC_BACSU -            451  3.1e-139  463.5  13.7   1   1  1.5e-142  3.1e-139  463.5  13.7     1   359    27   383    27   383 0.99 WXG100 protein secretion system (Wss), protein YukC
SprA-related         PF12118.3    295 sp|P71070|YUKC_BACSU -            451     0.012   14.9  20.1   1   1   7.6e-06     0.016   14.5  20.1    45   141   307   446   261   451 0.50 SprA-related family
Borrelia_P83         PF05262.6    489 sp|P71070|YUKC_BACSU -            451       0.2    9.8  23.2   1   1   0.00014       0.3    9.3  23.2   226   305   359   445   290   451 0.53 Borrelia P83/100 protein
WXG100               PF06013.7     86 sp|C0SP85|YUKE_BACSU -             97   3.5e-25   87.8   1.5   1   1   4.9e-28   4.1e-25   87.6   1.5     2    86     5    89     4    89 0.99 Proteins of 100 residues with WXG
DUF2580              PF10824.3    100 sp|C0SP85|YUKE_BACSU -             97   1.2e-05   25.5   0.1   1   1   1.8e-08   1.5e-05   25.2   0.1     1    99     1    96     1    97 0.92 Protein of unknown function (DUF2580)
PPE                  PF00823.14   159 sp|C0SP85|YUKE_BACSU -             97   0.00019   21.2   0.0   1   1   3.1e-07   0.00025   20.8   0.0    17    95     9    86     4    94 0.85 PPE family
UPF0449              PF15136.1     97 sp|C0SP85|YUKE_BACSU -             97   0.00087   19.4   0.8   1   1   1.7e-06    0.0014   18.7   0.4    41    94    41    95    26    97 0.86 Uncharacterised protein family UPF0449
Rho_N                PF07498.7     43 sp|C0SP85|YUKE_BACSU -             97     0.001   18.7   0.0   1   1   3.3e-06    0.0027   17.4   0.0     6    21     8    23     4    35 0.90 Rho termination factor, N-terminal domain
DUF342               PF03961.8    451 sp|C0SP85|YUKE_BACSU -             97    0.0056   15.1   0.4   1   1   7.6e-06    0.0063   14.9   0.4   330   409    10    88     3    96 0.86 Protein of unknown function (DUF342)
PilJ                 PF13675.1    112 sp|C0SP85|YUKE_BACSU -             97    0.0092   16.2   1.0   1   1     2e-05     0.017   15.4   1.0    51   107    22    84     6    95 0.68 Type IV pili methyl-accepting chemotaxis transducer N-term
Serine_rich          PF08824.5    159 sp|C0SP85|YUKE_BACSU -             97     0.019   14.7   0.3   1   1   2.3e-05     0.019   14.6   0.3    40   107    21    88     1    95 0.86 Serine rich protein interaction domain
DASH_Dad3            PF08656.5     78 sp|C0SP85|YUKE_BACSU -             97     0.045   13.4   2.0   2   2    0.0007      0.58    9.8   0.5    10    41    54    85    48    96 0.89 DASH complex subunit Dad3
Baculo_PEP_C         PF04513.7    140 sp|C0SP85|YUKE_BACSU -             97     0.053   13.3   2.8   1   1   0.00013      0.11   12.3   2.8    37    96    27    93    10    97 0.53 Baculovirus polyhedron envelope protein, PEP, C terminus
DUF2383              PF09537.5    111 sp|C0SP85|YUKE_BACSU -             97     0.058   13.6   0.4   1   2   0.00028      0.23   11.7   0.1    46    96     8    58     1    68 0.89 Domain of unknown function (DUF2383)
Methyltrn_RNA_4      PF09936.4    185 sp|C0SP85|YUKE_BACSU -             97     0.075   12.5   0.1   1   1    0.0001     0.085   12.3   0.1    36   102    15    82    10    95 0.82 SAM-dependent RNA methyltransferase
DUF1664              PF07889.7    126 sp|C0SP85|YUKE_BACSU -             97      0.12   12.1   1.2   2   2   0.00039      0.32   10.7   0.5    58    93    58    93    34    97 0.72 Protein of unknown function (DUF1664)
GFO_IDH_MocA         PF01408.17   120 sp|O05265|YULF_BACSU -            328   9.9e-27   93.8   0.2   1   1   4.5e-30   1.7e-26   93.1   0.2     1   118     2   119     2   121 0.94 Oxidoreductase family, NAD-binding Rossmann fold
GFO_IDH_MocA_C       PF02894.12   115 sp|O05265|YULF_BACSU -            328     0.035   13.9   0.0   1   1   2.2e-05     0.083   12.6   0.0     8    67   138   201   133   263 0.69 Oxidoreductase family, C-terminal alpha/beta domain
Semialdhyde_dh       PF01118.19   121 sp|O05265|YULF_BACSU -            328     0.054   13.7   0.0   1   1   4.4e-05      0.16   12.2   0.0     3    93     5    90     3    92 0.81 Semialdehyde dehydrogenase, NAD binding domain
NAD_binding_3        PF03447.11   117 sp|O05265|YULF_BACSU -            328     0.068   13.5   0.1   1   1   3.2e-05      0.12   12.8   0.1    12   112    16   115     6   119 0.73 Homoserine dehydrogenase, NAD binding domain
Pyr_redox_2          PF07992.9    201 sp|O05267|YUMB_BACSU -            406     2e-16   60.5   0.2   1   1   1.7e-19   3.1e-16   59.8   0.2     1   195     7   303     7   306 0.87 Pyridine nucleotide-disulphide oxidoreductase
Pyr_redox            PF00070.22    80 sp|O05267|YUMB_BACSU -            406   8.2e-11   42.1   1.8   2   2   6.2e-12   1.2e-08   35.2   0.0     2    70   161   242   160   251 0.84 Pyridine nucleotide-disulphide oxidoreductase
Pyr_redox_3          PF13738.1    203 sp|O05267|YUMB_BACSU -            406   8.3e-10   39.0   0.2   1   2     2e-07   0.00037   20.6   0.2    62   188    39   179     4   190 0.68 Pyridine nucleotide-disulphide oxidoreductase
Pyr_redox_3          PF13738.1    203 sp|O05267|YUMB_BACSU -            406   8.3e-10   39.0   0.2   2   2   7.7e-06     0.014   15.4   0.0    82   176   212   304   207   305 0.75 Pyridine nucleotide-disulphide oxidoreductase
DAO                  PF01266.19   358 sp|O05267|YUMB_BACSU -            406   8.5e-09   34.7   0.0   1   3     1e-05     0.019   13.8   0.0     1    39     7    49     7    61 0.91 FAD dependent oxidoreductase
DAO                  PF01266.19   358 sp|O05267|YUMB_BACSU -            406   8.5e-09   34.7   0.0   3   3   3.6e-05     0.066   12.0   0.0   149   212   214   277   210   308 0.83 FAD dependent oxidoreductase
NAD_binding_9        PF13454.1    156 sp|O05267|YUMB_BACSU -            406   2.8e-05   23.9   0.4   1   3     1e-05     0.019   14.7   0.0     1    49     9    56     9    63 0.89 FAD-NAD(P)-binding
NAD_binding_8        PF13450.1     68 sp|O05267|YUMB_BACSU -            406      0.12   12.4   0.9   1   1   0.00013      0.24   11.4   0.0     1    29    10    42    10    44 0.89 NAD(P)-binding Rossmann-like domain
5_nucleotid_C        PF02872.13   156 sp|O32133|YUND_BACSU -            462   8.3e-18   64.8   0.0   1   1   3.6e-21   1.8e-17   63.7   0.0     6   143   285   428   275   439 0.77 5'-nucleotidase, C-terminal domain
Metallophos          PF00149.23   200 sp|O32133|YUND_BACSU -            462   0.00031   20.2   4.7   1   1     4e-07     0.002   17.5   4.7     2   199     6   205     5   206 0.81 Calcineurin-like phosphoesterase
PGA_cap              PF09587.5    250 sp|O32133|YUND_BACSU -            462     0.018   14.4   0.4   1   2     1e-05      0.05   12.9   0.0   126   207   127   194    40   215 0.70 Bacterial capsule synthesis protein PGA_cap
TauE                 PF01925.14   240 sp|O32134|YUNE_BACSU -            273   1.7e-53  181.5  36.5   1   1   1.3e-57   1.9e-53  181.3  36.5     2   240     7   266     5   266 0.90 Sulfite exporter TauE/SafE
DUF72                PF01904.13   230 sp|O32135|YUNF_BACSU -            282     1e-68  231.5   0.2   1   1   7.9e-73   1.2e-68  231.3   0.2     2   230    16   267    15   267 0.95 Protein of unknown function DUF72
ABC_tran             PF00005.22   137 sp|O32151|YURJ_BACSU -            367   6.7e-31  107.4   0.0   1   1   2.5e-33   1.8e-30  105.9   0.0     2   136    20   161    19   162 0.90 ABC transporter
AAA_21               PF13304.1    303 sp|O32151|YURJ_BACSU -            367   1.3e-08   35.1   0.0   1   2   9.7e-05     0.072   13.0   0.0     2    38    32    66    31    77 0.76 AAA domain
AAA_21               PF13304.1    303 sp|O32151|YURJ_BACSU -            367   1.3e-08   35.1   0.0   2   2   9.1e-07   0.00067   19.7   0.0   222   298   119   193    93   198 0.82 AAA domain
TOBE_2               PF08402.5     75 sp|O32151|YURJ_BACSU -            367     2e-08   34.1   0.1   1   1   9.3e-11   6.9e-08   32.3   0.1     2    75   285   358   284   358 0.87 TOBE domain
TOBE                 PF03459.12    64 sp|O32151|YURJ_BACSU -            367   2.8e-08   33.7   0.1   2   2   3.1e-08   2.3e-05   24.3   0.0     6    62   304   355   302   357 0.96 TOBE domain
Rad17                PF03215.10   519 sp|O32151|YURJ_BACSU -            367   1.3e-05   24.0   0.0   1   1   2.5e-08   1.8e-05   23.6   0.0    38   112    22    96     7   132 0.73 Rad17 cell cycle checkpoint protein
SMC_N                PF02463.14   220 sp|O32151|YURJ_BACSU -            367   9.1e-05   21.7   0.0   1   1   3.6e-07   0.00026   20.2   0.0    11   211    11   204     2   214 0.69 RecF/RecN/SMC N terminal domain
AAA_22               PF13401.1    131 sp|O32151|YURJ_BACSU -            367    0.0014   18.7   0.2   1   1   3.9e-06    0.0029   17.7   0.2     3    26    28    51    25   198 0.86 AAA domain
DUF258               PF03193.11   161 sp|O32151|YURJ_BACSU -            367    0.0015   17.7   0.0   1   1   4.7e-06    0.0035   16.5   0.0    14    61     7    55     1    70 0.79 Protein of unknown function, DUF258
AAA_33               PF13671.1    143 sp|O32151|YURJ_BACSU -            367    0.0035   17.2   0.3   1   1   1.5e-05     0.011   15.5   0.1     1    29    31    56    31   128 0.75 AAA domain
AAA_14               PF13173.1    128 sp|O32151|YURJ_BACSU -            367    0.0059   16.5   0.0   1   1   5.3e-05      0.04   13.8   0.0     2    71    29    97    28   122 0.67 AAA domain
AAA_15               PF13175.1    415 sp|O32151|YURJ_BACSU -            367    0.0069   15.4   0.0   2   2   0.00018      0.13   11.2   0.0   371   411   153   193   142   195 0.93 AAA ATPase domain
AAA_29               PF13555.1     62 sp|O32151|YURJ_BACSU -            367    0.0084   15.6   0.0   1   1   2.9e-05     0.022   14.3   0.0    16    40    21    46    15    49 0.76 P-loop containing region of AAA domain
AAA_23               PF13476.1    202 sp|O32151|YURJ_BACSU -            367    0.0095   16.2   0.0   1   1   2.5e-05     0.019   15.3   0.0    11    37    20    47     3    51 0.75 AAA domain
AAA_16               PF13191.1    185 sp|O32151|YURJ_BACSU -            367     0.011   15.7   0.4   1   1   2.8e-05      0.02   14.8   0.4    24    44    29    49    22   159 0.89 AAA ATPase domain
AAA_17               PF13207.1    121 sp|O32151|YURJ_BACSU -            367     0.012   16.4   0.1   1   1   4.8e-05     0.036   14.8   0.0     3    39    33    70    31   173 0.78 AAA domain
AAA                  PF00004.24   132 sp|O32151|YURJ_BACSU -            367     0.018   15.2   0.1   1   1   7.5e-05     0.055   13.6   0.1     2    21    33    52    32   114 0.74 ATPase family associated with various cellular activities (AAA)
Zeta_toxin           PF06414.7    201 sp|O32151|YURJ_BACSU -            367     0.019   14.0   0.0   1   1   8.3e-05     0.061   12.4   0.0    14    52    27    66    15   121 0.83 Zeta toxin
AAA_18               PF13238.1    129 sp|O32151|YURJ_BACSU -            367     0.023   15.0   0.1   1   1   0.00024      0.18   12.1   0.1     2    42    33    83    32   186 0.82 AAA domain
MutS_V               PF00488.16   235 sp|O32151|YURJ_BACSU -            367     0.087   12.2   0.0   1   1   0.00032      0.24   10.7   0.0    28    64    14    50     3    57 0.83 MutS domain V
Miro                 PF08477.8    119 sp|O32151|YURJ_BACSU -            367      0.12   12.8   0.0   1   1   0.00055      0.41   11.1   0.0     3    39    33    68    32   118 0.83 Miro-like protein
BPD_transp_1         PF00528.17   185 sp|O32155|YURN_BACSU -            292   3.9e-18   65.6   9.4   2   2   2.6e-22   3.9e-18   65.6   9.4     2   176    81   282    80   287 0.83 Binding-protein-dependent transport system inner membrane component
BPD_transp_1         PF00528.17   185 sp|O32154|YURM_BACSU -            300   1.6e-15   57.1  24.3   1   1   3.9e-18   2.9e-14   53.0  24.3     3   183   110   293    31   295 0.83 Binding-protein-dependent transport system inner membrane component
OppC_N               PF12911.2     56 sp|O32154|YURM_BACSU -            300      0.16   11.3   0.3   1   3   2.1e-05      0.16   11.3   0.3    21    39    36    54    35    76 0.74 N-terminal TM domain of oligopeptide transport permease C
DAO                  PF01266.19   358 sp|O32159|YURR_BACSU -            372     4e-69  233.2   3.0   1   1   7.3e-72   4.5e-69  233.0   3.0     2   357     4   351     3   352 0.88 FAD dependent oxidoreductase
FAD_binding_2        PF00890.19   417 sp|O32159|YURR_BACSU -            372   1.3e-09   37.4   1.1   1   1   3.7e-12   2.3e-09   36.6   1.1     3   208     5   213     3   228 0.71 FAD binding domain
Pyr_redox_2          PF07992.9    201 sp|O32159|YURR_BACSU -            372   2.4e-06   27.5   1.5   1   1     9e-07   0.00055   19.8   1.5     2    29     4    42     3   240 0.57 Pyridine nucleotide-disulphide oxidoreductase
NAD_binding_8        PF13450.1     68 sp|O32159|YURR_BACSU -            372   2.9e-06   27.1   0.4   1   2   4.8e-09   2.9e-06   27.1   0.4     1    28     6    33     6    71 0.94 NAD(P)-binding Rossmann-like domain
GIDA                 PF01134.17   392 sp|O32159|YURR_BACSU -            372   2.1e-05   23.5   1.4   1   2   2.1e-05     0.013   14.3   0.4     3    40     5    47     3    49 0.93 Glucose inhibited division protein A
FAD_binding_3        PF01494.14   356 sp|O32159|YURR_BACSU -            372     8e-05   21.8   0.2   1   1     5e-07   0.00031   19.9   0.1     5    38     5    38     3    49 0.86 FAD binding domain
Pyr_redox_3          PF13738.1    203 sp|O32159|YURR_BACSU -            372   0.00012   22.2   0.1   1   2   3.7e-06    0.0023   18.0   0.0     1    48     5    50     5    86 0.79 Pyridine nucleotide-disulphide oxidoreductase
ApbA                 PF02558.11   151 sp|O32159|YURR_BACSU -            372   0.00013   21.4   0.5   1   1   5.8e-07   0.00036   20.0   0.2     2    31     5    34     4    47 0.89 Ketopantoate reductase PanE/ApbA
3HCDH_N              PF02737.13   180 sp|O32159|YURR_BACSU -            372   0.00019   21.1   0.0   1   1   5.7e-07   0.00035   20.2   0.0     4    33     6    35     4   106 0.88 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain
Pyr_redox            PF00070.22    80 sp|O32159|YURR_BACSU -            372   0.00024   21.4   0.1   1   1   1.2e-06   0.00073   19.8   0.1     3    32     5    34     3    44 0.92 Pyridine nucleotide-disulphide oxidoreductase
NAD_binding_7        PF13241.1    103 sp|O32159|YURR_BACSU -            372   0.00052   20.2   0.0   1   1   1.5e-06    0.0009   19.4   0.0     8    41     2    37     1   115 0.68 Putative NAD(P)-binding
Lycopene_cycl        PF05834.7    374 sp|O32159|YURR_BACSU -            372     0.001   18.0   0.3   1   2    0.0001     0.062   12.2   0.2     3    34     5    34     4    44 0.91 Lycopene cyclase protein
NAD_binding_9        PF13454.1    156 sp|O32159|YURR_BACSU -            372    0.0014   18.4   1.2   1   2   3.8e-05     0.024   14.4   0.2     1    38     5    37     5    44 0.90 FAD-NAD(P)-binding
adh_short            PF00106.20   167 sp|O32159|YURR_BACSU -            372    0.0026   17.6   1.4   1   1   1.3e-05    0.0081   16.0   0.0     1    39     2    41     2    93 0.79 short chain dehydrogenase
Thi4                 PF01946.12   230 sp|O32159|YURR_BACSU -            372    0.0045   16.1   2.2   1   1   7.5e-06    0.0047   16.0   0.1    21    49     5    33     2    39 0.94 Thi4 family
Shikimate_DH         PF01488.15   135 sp|O32159|YURR_BACSU -            372    0.0078   16.3   0.2   1   1   2.9e-05     0.018   15.1   0.1    13    45     2    33     1    38 0.92 Shikimate / quinate 5-dehydrogenase
Trp_halogenase       PF04820.9    454 sp|O32159|YURR_BACSU -            372      0.01   14.4   1.1   1   1   0.00019      0.12   10.9   1.1     3   208     5   205     3   220 0.75 Tryptophan halogenase
HI0933_like          PF03486.9    409 sp|O32159|YURR_BACSU -            372     0.011   14.2   0.8   1   2   0.00023      0.14   10.5   0.1     3    33     4    34     2    39 0.91 HI0933-like protein
NAD_binding_2        PF03446.10   163 sp|O32159|YURR_BACSU -            372     0.011   15.6   0.0   1   1   4.3e-05     0.026   14.3   0.0     2    36     2    36     1    55 0.81 NAD binding domain of 6-phosphogluconate dehydrogenase
TrkA_N               PF02254.13   116 sp|O32159|YURR_BACSU -            372     0.013   15.4   0.4   1   1   9.9e-05     0.061   13.3   0.1     1    31     4    34     4    47 0.87 TrkA-N domain
UDPG_MGDP_dh_N       PF03721.9    185 sp|O32159|YURR_BACSU -            372     0.031   13.6   0.1   1   1   0.00014     0.087   12.1   0.1     5    32     6    33     3    38 0.94 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain
Amino_oxidase        PF01593.19   450 sp|O32159|YURR_BACSU -            372     0.097   11.7   0.1   2   2    0.0007      0.43    9.5   0.0   234   266   177   209   126   227 0.79 Flavin containing amine oxidoreductase
XdhC_C               PF13478.1    136 sp|O32159|YURR_BACSU -            372       0.1   12.9   0.0   1   1   0.00032       0.2   11.9   0.0     2    34     5    37     4   131 0.81 XdhC Rossmann domain
SBP_bac_1            PF01547.20   315 sp|O32156|YURO_BACSU -            422     7e-53  180.3   5.8   1   1     4e-56   9.9e-53  179.8   5.8     4   311    43   331    40   365 0.89 Bacterial extracellular solute-binding protein
SBP_bac_8            PF13416.1    281 sp|O32156|YURO_BACSU -            422   2.9e-37  128.9   5.2   1   1   1.6e-40   3.9e-37  128.5   5.2     1   271    51   355    51   365 0.79 Bacterial extracellular solute-binding protein
SBP_bac_6            PF13343.1    242 sp|O32156|YURO_BACSU -            422   2.3e-06   27.1   4.8   1   2     4e-05     0.099   11.9   3.6     3    80    88   175    86   274 0.70 Bacterial extracellular solute-binding protein
SBP_bac_6            PF13343.1    242 sp|O32156|YURO_BACSU -            422   2.3e-06   27.1   4.8   2   2     9e-06     0.022   14.0   0.0   175   221   306   354   300   372 0.80 Bacterial extracellular solute-binding protein
SBP_bac_11           PF13531.1    230 sp|O32156|YURO_BACSU -            422    0.0011   18.6   0.0   1   2   0.00038      0.93    9.0   0.0    13    82    49   132    45   197 0.69 Bacterial extracellular solute-binding protein
Glycoamylase         PF10091.4    234 sp|O32156|YURO_BACSU -            422     0.038   13.0   0.0   1   1   3.8e-05     0.093   11.7   0.0   137   204   290   361   286   368 0.82 Putative glucoamylase
Glyoxalase           PF00903.20   128 sp|O32161|YURT_BACSU -            127   2.5e-15   56.5   0.0   1   1   9.7e-19   2.9e-15   56.3   0.0     3   128     4   124     2   124 0.87 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily
Glyoxalase_2         PF12681.2    108 sp|O32161|YURT_BACSU -            127   1.6e-11   44.7   0.0   1   1   6.2e-15   1.8e-11   44.5   0.0     1   108     8   125     8   125 0.77 Glyoxalase-like domain
Glyoxalase_4         PF13669.1    109 sp|O32161|YURT_BACSU -            127    0.0098   15.8   0.0   1   1   5.7e-06     0.017   15.1   0.0     5   102     8   108     6   114 0.77 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily
Glyoxalase_5         PF14696.1    139 sp|O32161|YURT_BACSU -            127     0.027   14.3   0.0   1   1   1.1e-05     0.033   14.1   0.0    17   125    11   126     7   127 0.81 Hydroxyphenylpyruvate dioxygenase, HPPD, N-terminal
Glyoxalase_3         PF13468.1    175 sp|O32161|YURT_BACSU -            127     0.033   14.1   0.0   1   1   5.8e-05      0.17   11.7   0.0    74   110    71   108     6   115 0.74 Glyoxalase-like domain
ArsC                 PF03960.10   110 sp|O32175|YUSI_BACSU -            118     1e-35  122.1   0.1   1   1     3e-39   1.1e-35  121.9   0.1     1   109     6   115     6   116 0.99 ArsC family
Glutaredoxin         PF00462.19    60 sp|O32175|YUSI_BACSU -            118   3.8e-09   36.4   0.1   1   2   2.7e-11     1e-07   31.8   0.0     2    45     4    47     3    52 0.91 Glutaredoxin
DUF836               PF05768.9     81 sp|O32175|YUSI_BACSU -            118     0.004   17.3   0.0   1   1   1.6e-06     0.006   16.8   0.0     2    76     3    83     2    88 0.67 Glutaredoxin-like domain (DUF836)
FAM110_C             PF14160.1    112 sp|O32175|YUSI_BACSU -            118     0.055   14.4   0.0   1   1   1.9e-05      0.07   14.0   0.0     9    60    39    88    33   115 0.81 Centrosome-associated C terminus
MFS_1                PF07690.11   352 sp|O32182|YUSP_BACSU -            541   3.1e-56  190.6  62.0   1   2   6.1e-57     1e-53  182.3  61.2     1   351    19   410    19   411 0.91 Major Facilitator Superfamily
TRI12                PF06609.8    599 sp|O32182|YUSP_BACSU -            541   1.5e-15   56.4  28.0   1   1   1.4e-18   2.3e-15   55.8  28.0    64   496    34   449    18   531 0.77 Fungal trichothecene efflux pump (TRI12)
Sugar_tr             PF00083.19   451 sp|O32182|YUSP_BACSU -            541   3.3e-09   35.8  47.3   1   4   1.3e-08   2.2e-05   23.2   7.5    48   120    50   119    45   122 0.93 Sugar (and other) transporter
Sugar_tr             PF00083.19   451 sp|O32182|YUSP_BACSU -            541   3.3e-09   35.8  47.3   2   4   0.00015      0.24    9.9   2.7   368   433   120   185   117   189 0.93 Sugar (and other) transporter
Sugar_tr             PF00083.19   451 sp|O32182|YUSP_BACSU -            541   3.3e-09   35.8  47.3   3   4   1.2e-06     0.002   16.7  16.5    43   157   270   413   214   434 0.78 Sugar (and other) transporter
MFS_2                PF13347.1    428 sp|O32182|YUSP_BACSU -            541   8.6e-08   30.9  48.0   1   3   6.1e-06      0.01   14.2  10.4   257   378    46   161     4   173 0.84 MFS/sugar transport protein
MFS_2                PF13347.1    428 sp|O32182|YUSP_BACSU -            541   8.6e-08   30.9  48.0   2   3   8.9e-09   1.5e-05   23.6  25.2   151   383   204   419   180   424 0.83 MFS/sugar transport protein
MFS_3                PF05977.8    524 sp|O32182|YUSP_BACSU -            541   4.1e-05   21.9   6.9   1   2   2.5e-08   4.1e-05   21.9   6.9    64   186    67   184    20   197 0.84 Transmembrane secretion effector
OATP                 PF03137.15   539 sp|O32182|YUSP_BACSU -            541   0.00022   19.4   6.2   2   2   1.3e-07   0.00022   19.4   6.2   299   384   260   344   246   356 0.86 Organic Anion Transporter Polypeptide (OATP) family
DUF4149              PF13664.1    101 sp|O32182|YUSP_BACSU -            541    0.0013   18.7   0.9   2   3   7.7e-07    0.0013   18.7   0.9    13    93   176   254   164   255 0.90 Domain of unknown function (DUF4149)
MFS_1_like           PF12832.2     77 sp|O32182|YUSP_BACSU -            541      0.22   11.3  18.1   3   4   6.1e-05       0.1   12.4   3.1    13    76   283   343   267   344 0.86 MFS_1 like family
Tautomerase_2        PF14552.1     82 sp|O32183|YUSQ_BACSU -            127   6.3e-35  119.0   0.9   1   2   4.8e-05      0.24   11.4   0.0    31    67     3    39     1    40 0.94 Tautomerase enzyme
Tautomerase_2        PF14552.1     82 sp|O32183|YUSQ_BACSU -            127   6.3e-35  119.0   0.9   2   2   1.5e-35   7.3e-32  109.2   0.4     1    82    38   119    38   119 0.99 Tautomerase enzyme
Tautomerase          PF01361.16    60 sp|O32183|YUSQ_BACSU -            127   2.2e-13   49.5   0.0   1   2   2.9e-11   1.4e-07   30.9   0.0     1    49     2    50     2    55 0.94 Tautomerase enzyme
Tautomerase          PF01361.16    60 sp|O32183|YUSQ_BACSU -            127   2.2e-13   49.5   0.0   2   2     8e-07    0.0039   16.7   0.0     2    53    68   119    68   123 0.93 Tautomerase enzyme
DUF1007              PF06226.8    213 sp|O32183|YUSQ_BACSU -            127      0.01   15.6   0.2   1   1   2.6e-06     0.013   15.2   0.2    82   133    32    83    13    89 0.82 Protein of unknown function (DUF1007)
adh_short_C2         PF13561.1    241 sp|O32184|YUSR_BACSU -            129   2.9e-10   40.3   0.1   1   1   4.5e-14   3.3e-10   40.1   0.1   117   239     9   126     3   128 0.86 Enoyl-(Acyl carrier protein) reductase
adh_short            PF00106.20   167 sp|O32184|YUSR_BACSU -            129   1.4e-07   31.6   0.3   1   1   2.8e-11   2.1e-07   31.0   0.3   113   166     2    59     1    60 0.87 short chain dehydrogenase
adh_short            PF00106.20   167 sp|O32185|YUSS_BACSU -            109   4.3e-20   72.3   1.7   1   1   3.1e-23   4.6e-20   72.2   1.7     1   101     6   104     6   109 0.95 short chain dehydrogenase
KR                   PF08659.5    181 sp|O32185|YUSS_BACSU -            109   9.2e-12   44.9   1.3   1   1   7.4e-15   1.1e-11   44.7   1.3     3   102     8   104     7   108 0.93 KR domain
adh_short_C2         PF13561.1    241 sp|O32185|YUSS_BACSU -            109   5.1e-07   29.7   0.5   1   1   3.9e-10   5.8e-07   29.5   0.5     6    86    15    96    12   108 0.86 Enoyl-(Acyl carrier protein) reductase
Eno-Rase_NADH_b      PF12242.3     78 sp|O32185|YUSS_BACSU -            109    0.0042   16.8   2.0   1   2   5.1e-06    0.0076   16.0   0.6    40    77     6    41     3    42 0.86 NAD(P)H binding domain of trans-2-enoyl-CoA reductase
Epimerase            PF01370.16   236 sp|O32185|YUSS_BACSU -            109    0.0063   15.9   0.2   1   1   4.7e-06     0.007   15.8   0.2     1    64     8    77     8   105 0.75 NAD dependent epimerase/dehydratase family
Peripla_BP_6         PF13458.1    343 sp|O32185|YUSS_BACSU -            109    0.0089   15.4   0.5   1   1   7.2e-06     0.011   15.1   0.5   126   194    17    86     8    95 0.81 Periplasmic binding protein
THF_DHG_CYH_C        PF02882.14   161 sp|O32185|YUSS_BACSU -            109     0.013   14.5   0.5   1   1   1.1e-05     0.017   14.2   0.5    34   101     3    68     1    94 0.82 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain
PAD_M                PF08527.5    159 sp|O32185|YUSS_BACSU -            109     0.014   14.8   0.0   1   1   1.3e-05      0.02   14.2   0.0    32    95    28   103    25   106 0.82 Protein-arginine deiminase (PAD) middle domain
NAD_binding_10       PF13460.1    183 sp|O32185|YUSS_BACSU -            109     0.029   14.3   0.4   1   1   2.4e-05     0.035   14.1   0.4     2    66     9    79     8   105 0.78 NADH(P)-binding
DHHA1                PF02272.14    68 sp|O32185|YUSS_BACSU -            109     0.096   12.4   1.4   1   1   0.00059      0.88    9.3   1.6    33    67    45    78     7    79 0.87 DHHA1 domain
ABC_tran             PF00005.22   137 sp|O32188|YUSV_BACSU -            275   5.4e-33  114.1   0.0   1   1   1.6e-35   7.4e-33  113.7   0.0     2   136    22   169    21   170 0.96 ABC transporter
AAA_21               PF13304.1    303 sp|O32188|YUSV_BACSU -            275   4.7e-13   49.7   0.1   1   2   1.2e-07   5.2e-05   23.3   0.0     1    22    33    54    33    81 0.86 AAA domain
AAA_21               PF13304.1    303 sp|O32188|YUSV_BACSU -            275   4.7e-13   49.7   0.1   2   2   4.7e-08   2.1e-05   24.6   0.0   232   301   137   204   104   205 0.82 AAA domain
AAA_15               PF13175.1    415 sp|O32188|YUSV_BACSU -            275   3.4e-07   29.6   1.6   1   2   4.4e-05      0.02   13.9   0.0    18    44    24    53     6    80 0.80 AAA ATPase domain
AAA_15               PF13175.1    415 sp|O32188|YUSV_BACSU -            275   3.4e-07   29.6   1.6   2   2   2.2e-05    0.0098   14.9   0.3   371   407   159   197   150   205 0.84 AAA ATPase domain
SMC_N                PF02463.14   220 sp|O32188|YUSV_BACSU -            275   6.9e-06   25.4   1.3   1   1   2.1e-06   0.00092   18.4   1.3    25   198    32   200    22   220 0.65 RecF/RecN/SMC N terminal domain
AAA_16               PF13191.1    185 sp|O32188|YUSV_BACSU -            275   1.5e-05   25.1   1.5   1   1   1.7e-07   7.6e-05   22.7   1.5    23   159    30   202    20   215 0.53 AAA ATPase domain
AAA_29               PF13555.1     62 sp|O32188|YUSV_BACSU -            275   4.3e-05   22.9   0.0   1   1   1.8e-07     8e-05   22.0   0.0    21    51    29    59    21    64 0.87 P-loop containing region of AAA domain
ABC_ATPase           PF09818.4    448 sp|O32188|YUSV_BACSU -            275   9.6e-05   21.1   0.1   1   2   2.9e-05     0.013   14.1   0.0   240   266    26    53    22    57 0.93 Predicted ATPase of the ABC class
DUF258               PF03193.11   161 sp|O32188|YUSV_BACSU -            275   0.00014   21.0   0.0   1   1   5.3e-07   0.00024   20.3   0.0    11    59     6    55     2    81 0.82 Protein of unknown function, DUF258
AAA_22               PF13401.1    131 sp|O32188|YUSV_BACSU -            275    0.0017   18.4   1.4   1   1   1.4e-05    0.0064   16.6   0.8     4   111    31   187    26   206 0.64 AAA domain
AAA_23               PF13476.1    202 sp|O32188|YUSV_BACSU -            275    0.0017   18.6   2.1   1   1   9.3e-06    0.0042   17.4   2.1    15    39    26    51    14   199 0.87 AAA domain
AAA_25               PF13481.1    194 sp|O32188|YUSV_BACSU -            275    0.0018   17.7   0.3   1   1   7.9e-06    0.0035   16.7   0.3    30    55    28    53    19   200 0.90 AAA domain
AAA_28               PF13521.1    163 sp|O32188|YUSV_BACSU -            275     0.003   17.5   0.1   1   1   1.2e-05    0.0053   16.7   0.1     3    23    35    59    33   140 0.80 AAA domain
AAA_5                PF07728.9    139 sp|O32188|YUSV_BACSU -            275    0.0041   16.8   0.3   1   2   0.00024      0.11   12.2   0.1     3    24    35    59    33    85 0.85 AAA domain (dynein-related subfamily)
MobB                 PF03205.9    140 sp|O32188|YUSV_BACSU -            275    0.0052   16.4   0.0   1   1   2.4e-05     0.011   15.4   0.0     2    31    33    62    32    65 0.89 Molybdopterin guanine dinucleotide synthesis protein B
NACHT                PF05729.7    166 sp|O32188|YUSV_BACSU -            275    0.0064   16.1   0.1   1   1   4.4e-05      0.02   14.5   0.0     3    25    34    56    32    62 0.87 NACHT domain
AAA_13               PF13166.1    712 sp|O32188|YUSV_BACSU -            275     0.012   14.1   0.1   1   1   7.3e-05     0.033   12.6   0.0    16    40    31    55    20    74 0.86 AAA domain
AAA_33               PF13671.1    143 sp|O32188|YUSV_BACSU -            275     0.012   15.4   0.1   1   1     5e-05     0.022   14.6   0.1     2    21    34    53    33   164 0.80 AAA domain
Arch_ATPase          PF01637.13   234 sp|O32188|YUSV_BACSU -            275     0.014   15.0   0.2   1   2   0.00033      0.15   11.7   0.0    16    45    29    56    20    86 0.81 Archaeal ATPase
SRP54                PF00448.17   196 sp|O32188|YUSV_BACSU -            275     0.019   14.3   0.0   1   1   8.3e-05     0.037   13.4   0.0     3    34    33    64    31    71 0.92 SRP54-type protein, GTPase domain
AAA_30               PF13604.1    196 sp|O32188|YUSV_BACSU -            275     0.021   14.4   0.1   1   1   9.5e-05     0.043   13.4   0.1    17    51    30    64    24   171 0.77 AAA domain
Miro                 PF08477.8    119 sp|O32188|YUSV_BACSU -            275     0.031   14.7   0.0   1   1   0.00019     0.087   13.3   0.0     4    26    36    69    34   133 0.77 Miro-like protein
AAA                  PF00004.24   132 sp|O32188|YUSV_BACSU -            275     0.031   14.4   0.4   1   1   0.00024      0.11   12.7   0.4     2    24    35    57    34   199 0.75 ATPase family associated with various cellular activities (AAA)
AAA_18               PF13238.1    129 sp|O32188|YUSV_BACSU -            275     0.034   14.4   0.2   1   1   0.00021     0.094   13.0   0.2     3    68    36   116    35   229 0.77 AAA domain
AAA_14               PF13173.1    128 sp|O32188|YUSV_BACSU -            275     0.035   13.9   0.5   1   2   0.00064      0.29   11.0   0.1     2    24    31    53    30    73 0.88 AAA domain
Viral_helicase1      PF01443.13   234 sp|O32188|YUSV_BACSU -            275     0.038   13.5   0.1   1   1   0.00019     0.084   12.3   0.0     5    23    38    61    34    89 0.70 Viral (Superfamily 1) RNA helicase
TrwB_AAD_bind        PF10412.4    386 sp|O32188|YUSV_BACSU -            275     0.042   12.4   0.2   1   2    0.0012      0.56    8.7   0.1    18    46    34    62    28    69 0.90 Type IV secretion-system coupling protein DNA-binding domain
AAA_17               PF13207.1    121 sp|O32188|YUSV_BACSU -            275     0.042   14.6   0.7   1   1   0.00041      0.19   12.5   0.7     4    24    36    59    33   226 0.66 AAA domain
AAA_10               PF12846.2    304 sp|O32188|YUSV_BACSU -            275     0.059   12.8   0.4   1   1   0.00051      0.23   10.8   0.1     4    32    34    62    31    65 0.87 AAA-like domain
Mg_chelatase         PF01078.16   207 sp|O32188|YUSV_BACSU -            275     0.059   12.5   0.0   1   1   0.00033      0.15   11.2   0.0    26    69    35    78    18    92 0.85 Magnesium chelatase, subunit ChlI
RNA_helicase         PF00910.17   107 sp|O32188|YUSV_BACSU -            275     0.071   13.2   0.0   1   1    0.0004      0.18   11.9   0.0     2    22    35    55    34    77 0.86 RNA helicase
Adeno_IVa2           PF02456.10   370 sp|O32188|YUSV_BACSU -            275       0.1   11.2   0.0   1   1   0.00035      0.16   10.5   0.0    88   134    32    76    17    83 0.79 Adenovirus IVa2 protein
ATP-synt_ab          PF00006.20   215 sp|O32188|YUSV_BACSU -            275       0.1   12.0   0.0   1   1    0.0004      0.18   11.2   0.0    10    39    26    55    18    86 0.88 ATP synthase alpha/beta family, nucleotide-binding domain
adh_short            PF00106.20   167 sp|P37959|YUSZ_BACSU -            280   5.5e-33  114.2   0.0   1   1   4.4e-36   7.2e-33  113.8   0.0     1   166     4   170     4   171 0.93 short chain dehydrogenase
KR                   PF08659.5    181 sp|P37959|YUSZ_BACSU -            280   2.5e-12   46.8   0.0   1   1   2.2e-15   3.6e-12   46.3   0.0     4   166     7   169     5   181 0.89 KR domain
adh_short_C2         PF13561.1    241 sp|P37959|YUSZ_BACSU -            280   4.7e-10   39.6   0.0   1   1   3.3e-13   5.4e-10   39.4   0.0     8   191    15   196     7   241 0.78 Enoyl-(Acyl carrier protein) reductase
DUF1776              PF08643.5    299 sp|P37959|YUSZ_BACSU -            280   3.3e-05   23.1   0.0   1   1   4.3e-08     7e-05   22.1   0.0   107   282    94   254    89   270 0.73 Fungal family of unknown function (DUF1776)
NAD_binding_10       PF13460.1    183 sp|P37959|YUSZ_BACSU -            280     0.006   16.6   0.1   1   1   6.5e-06     0.011   15.7   0.1     2   100     7   141     6   167 0.80 NADH(P)-binding
Eno-Rase_NADH_b      PF12242.3     78 sp|P37959|YUSZ_BACSU -            280    0.0094   15.7   0.4   1   1   1.9e-05     0.032   14.0   0.4    42    60     6    24     2    32 0.86 NAD(P)H binding domain of trans-2-enoyl-CoA reductase
ADH_zinc_N           PF00107.21   130 sp|P37959|YUSZ_BACSU -            280     0.016   14.7   0.1   1   1   1.9e-05     0.031   13.8   0.1     4    40    18    52    14    90 0.78 Zinc-binding dehydrogenase
F420_oxidored        PF03807.12    96 sp|P37959|YUSZ_BACSU -            280     0.094   13.1   0.1   1   1   0.00011      0.17   12.3   0.1     1    48     4    52     4    72 0.75 NADP oxidoreductase coenzyme F420-dependent
DUF86                PF01934.12   119 sp|O32126|YUTE_BACSU -            144     2e-18   66.1   0.1   1   1   1.6e-22   2.3e-18   65.9   0.1    18   119    27   129     8   129 0.92 Protein of unknown function DUF86
Hydrolase_6          PF13344.1    101 sp|O32125|YUTF_BACSU -            256   8.2e-30  102.6   0.0   1   1     6e-33   1.5e-29  101.8   0.0     1   100     7   106     7   107 0.98 Haloacid dehalogenase-like hydrolase
Hydrolase_like       PF13242.1     75 sp|O32125|YUTF_BACSU -            256   2.6e-21   75.0   0.1   1   1   3.3e-24   8.1e-21   73.5   0.1     2    74   179   251   178   252 0.97 HAD-hyrolase-like
Hydrolase            PF00702.21   215 sp|O32125|YUTF_BACSU -            256   1.9e-11   44.7   1.2   1   1   1.7e-13   4.2e-10   40.4   1.2     2   215     5   219     4   219 0.73 haloacid dehalogenase-like hydrolase
HAD_2                PF13419.1    176 sp|O32125|YUTF_BACSU -            256   2.5e-09   37.5   0.0   1   2   0.00028      0.69   10.1   0.0    79   119    22    62     5    92 0.77 Haloacid dehalogenase-like hydrolase
HAD_2                PF13419.1    176 sp|O32125|YUTF_BACSU -            256   2.5e-09   37.5   0.0   2   2   5.7e-09   1.4e-05   25.3   0.0   126   176   174   225   134   225 0.81 Haloacid dehalogenase-like hydrolase
Hydrolase_3          PF08282.7    254 sp|O32125|YUTF_BACSU -            256     0.006   16.1   0.1   1   1   4.7e-06     0.012   15.2   0.0     2    52     8    57     7   102 0.93 haloacid dehalogenase-like hydrolase
Acid_phosphat_B      PF03767.9    230 sp|O32125|YUTF_BACSU -            256    0.0064   15.8   0.1   1   2   7.6e-06     0.019   14.3   0.0   116   193    20    97    13   118 0.88 HAD superfamily, subfamily IIIB (Acid phosphatase)
NifU                 PF01106.12    68 sp|O32119|YUTI_BACSU -            111   3.4e-28   97.2   0.7   1   1     3e-32   4.5e-28   96.8   0.7     1    68    43   110    43   110 0.98 NifU-like domain
Pyr_redox            PF00070.22    80 sp|O32117|YUTJ_BACSU -            355   3.6e-13   49.7   0.0   2   2   6.8e-15     1e-11   45.0   0.0     2    68   144   212   143   220 0.90 Pyridine nucleotide-disulphide oxidoreductase
Pyr_redox_2          PF07992.9    201 sp|O32117|YUTJ_BACSU -            355   1.9e-12   47.5   0.0   1   1   3.5e-15   5.1e-12   46.0   0.0     1   198     3   274     3   277 0.84 Pyridine nucleotide-disulphide oxidoreductase
DAO                  PF01266.19   358 sp|O32117|YUTJ_BACSU -            355   9.5e-09   34.6   0.1   1   2   0.00021      0.31    9.9   0.0     2    32   144   176   143   181 0.92 FAD dependent oxidoreductase
DAO                  PF01266.19   358 sp|O32117|YUTJ_BACSU -            355   9.5e-09   34.6   0.1   2   2   2.7e-08     4e-05   22.6   0.0   146   215   183   251   179   303 0.80 FAD dependent oxidoreductase
NAD_binding_9        PF13454.1    156 sp|O32117|YUTJ_BACSU -            355   4.6e-07   29.7   0.0   1   4   0.00037      0.54   10.0   0.0     1    36     5    39     5    51 0.90 FAD-NAD(P)-binding
NAD_binding_9        PF13454.1    156 sp|O32117|YUTJ_BACSU -            355   4.6e-07   29.7   0.0   3   4   1.8e-05     0.026   14.2   0.0     1    35   145   176   145   186 0.90 FAD-NAD(P)-binding
Pyr_redox_3          PF13738.1    203 sp|O32117|YUTJ_BACSU -            355   1.9e-06   28.1   0.0   2   4   1.5e-05     0.022   14.8   0.0   168   196   142   170    64   174 0.54 Pyridine nucleotide-disulphide oxidoreductase
Pyr_redox_3          PF13738.1    203 sp|O32117|YUTJ_BACSU -            355   1.9e-06   28.1   0.0   3   4   6.2e-06    0.0093   16.0   0.0     1    31   145   176   145   182 0.87 Pyridine nucleotide-disulphide oxidoreductase
Lycopene_cycl        PF05834.7    374 sp|O32117|YUTJ_BACSU -            355   1.5e-05   24.1   0.0   2   2   9.5e-07    0.0014   17.6   0.0     2    36   144   178   143   186 0.92 Lycopene cyclase protein
K_oxygenase          PF13434.1    341 sp|O32117|YUTJ_BACSU -            355   3.5e-05   22.8   0.0   2   2   9.4e-08   0.00014   20.9   0.0   159   249   113   203    68   227 0.79 L-lysine 6-monooxygenase (NADPH-requiring)
NAD_binding_8        PF13450.1     68 sp|O32117|YUTJ_BACSU -            355   0.00024   21.0   0.0   2   2     6e-06    0.0089   16.0   0.0     1    31   146   178   146   211 0.79 NAD(P)-binding Rossmann-like domain
Met_synt_B12         PF02965.12   211 sp|O32117|YUTJ_BACSU -            355     0.067   12.3   0.0   1   2   0.00042      0.62    9.2   0.0    68   132   140   199    15   206 0.81 Vitamin B12 dependent methionine synthase, activation domain
Thi4                 PF01946.12   230 sp|O32117|YUTJ_BACSU -            355      0.15   11.0   0.0   1   1   0.00023      0.34    9.9   0.0     9    48   132   174   126   181 0.80 Thi4 family
Nucleos_tra2_C       PF07662.8    210 sp|O32115|YUTK_BACSU -            404   5.7e-85  284.0  11.1   2   2   1.5e-88   5.7e-85  284.0  11.1     1   210   194   404   194   404 0.97 Na+ dependent nucleoside transporter C-terminus
Nucleos_tra2_N       PF01773.15    75 sp|O32115|YUTK_BACSU -            404   7.6e-25   87.0   3.8   1   3     2e-28   7.6e-25   87.0   3.8     1    74     8    81     8    82 0.98 Na+ dependent nucleoside transporter N-terminus
Gate                 PF07670.9    109 sp|O32115|YUTK_BACSU -            404   5.5e-06   26.2   6.8   2   3   1.5e-09   5.5e-06   26.2   6.8     2    99    92   182    91   190 0.91 Nucleoside recognition
Herpes_UL49_5        PF05702.6     98 sp|O32115|YUTK_BACSU -            404      0.69    9.8   4.2   2   2   0.00015      0.57   10.0   0.1    49    84   245   280   199   289 0.83 Herpesvirus UL49.5 envelope/tegument protein
adh_short            PF00106.20   167 sp|P40747|YUXG_BACSU -            689   1.2e-29  103.3   1.4   1   1   5.7e-32   8.5e-29  100.6   2.5     1   166   428   597   428   598 0.94 short chain dehydrogenase
Aldolase_II          PF00596.16   184 sp|P40747|YUXG_BACSU -            689   5.2e-27   94.6   0.0   1   2   1.7e-29   2.6e-26   92.3   0.0     1   183    19   218    19   219 0.84 Class II Aldolase and Adducin N-terminal domain
adh_short_C2         PF13561.1    241 sp|P40747|YUXG_BACSU -            689   4.5e-26   92.0   0.3   1   1     6e-29   8.9e-26   91.1   0.3     6   240   437   683   434   684 0.88 Enoyl-(Acyl carrier protein) reductase
KR                   PF08659.5    181 sp|P40747|YUXG_BACSU -            689   2.3e-10   40.4   0.9   1   1   3.9e-13   5.8e-10   39.1   0.9     3   167   430   597   429   608 0.85 KR domain
Epimerase            PF01370.16   236 sp|P40747|YUXG_BACSU -            689   6.6e-08   32.2   0.1   1   1   1.3e-10   1.9e-07   30.7   0.2     1   122   430   573   430   596 0.71 NAD dependent epimerase/dehydratase family
Polysacc_synt_2      PF02719.10   294 sp|P40747|YUXG_BACSU -            689    0.0012   17.8   0.1   1   1   1.3e-06    0.0019   17.1   0.1     2   111   431   542   430   554 0.73 Polysaccharide biosynthesis protein
F420_oxidored        PF03807.12    96 sp|P40747|YUXG_BACSU -            689     0.014   15.8   1.6   1   1     3e-05     0.045   14.1   1.3     1    48   428   483   428   502 0.79 NADP oxidoreductase coenzyme F420-dependent
3Beta_HSD            PF01073.14   280 sp|P40747|YUXG_BACSU -            689     0.029   13.0   0.2   1   1   3.4e-05      0.05   12.3   0.2     1    96   431   539   431   661 0.80 3-beta hydroxysteroid dehydrogenase/isomerase family
NAD_binding_10       PF13460.1    183 sp|P40747|YUXG_BACSU -            689     0.042   13.8   0.1   1   1   5.8e-05     0.087   12.8   0.1     2    73   431   519   431   590 0.78 NADH(P)-binding
3HCDH_N              PF02737.13   180 sp|P40747|YUXG_BACSU -            689      0.19   11.3   0.9   1   1   0.00023      0.34   10.5   0.9     6    68   435   501   428   521 0.80 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain
MFS_1                PF07690.11   352 sp|P40760|YUXJ_BACSU -            392   4.9e-48  163.6  55.7   1   2   1.5e-32   5.6e-29  100.9  30.5     2   262     2   256     1   260 0.79 Major Facilitator Superfamily
MFS_1                PF07690.11   352 sp|P40760|YUXJ_BACSU -            392   4.9e-48  163.6  55.7   2   2   5.3e-23     2e-19   69.5  22.0    34   174   243   381   238   391 0.91 Major Facilitator Superfamily
Sugar_tr             PF00083.19   451 sp|P40760|YUXJ_BACSU -            392   1.1e-11   43.9  40.2   1   2   5.4e-11     2e-07   29.9  19.1    44   173    34   160     2   177 0.80 Sugar (and other) transporter
Sugar_tr             PF00083.19   451 sp|P40760|YUXJ_BACSU -            392   1.1e-11   43.9  40.2   2   2   3.1e-07    0.0012   17.5  12.1    49   185   244   377   238   388 0.83 Sugar (and other) transporter
MFS_3                PF05977.8    524 sp|P40760|YUXJ_BACSU -            392   6.7e-07   27.8  14.8   1   1   2.5e-10   9.2e-07   27.3  14.8    76   397    67   385    41   392 0.82 Transmembrane secretion effector
ATG22                PF11700.3    477 sp|P40760|YUXJ_BACSU -            392     0.007   14.8  33.9   1   3   7.5e-06     0.028   12.9   4.3    74   135    40    99    24   106 0.77 Vacuole effluxer Atg22 like
ATG22                PF11700.3    477 sp|P40760|YUXJ_BACSU -            392     0.007   14.8  33.9   2   3   1.8e-05     0.066   11.6   7.0   381   471    90   179    86   185 0.87 Vacuole effluxer Atg22 like
DUF393               PF04134.7    114 sp|P40761|YUXK_BACSU -            137     3e-32  112.0   0.0   1   1   2.3e-36   3.5e-32  111.8   0.0     1   114    11   120    11   120 0.98 Protein of unknown function, DUF393
Peptidase_S9         PF00326.16   213 sp|P39839|YUXL_BACSU -            657   5.1e-59  199.0   0.2   1   1   8.9e-62   7.8e-59  198.4   0.2     3   210   448   657   446   657 0.96 Prolyl oligopeptidase family
PD40                 PF07676.7     39 sp|P39839|YUXL_BACSU -            657   1.8e-25   88.1   1.5   2   5     1e-10   8.8e-08   31.6   0.1     4    38    59    92    56    93 0.84 WD40-like Beta Propeller Repeat
PD40                 PF07676.7     39 sp|P39839|YUXL_BACSU -            657   1.8e-25   88.1   1.5   4   5   1.9e-10   1.6e-07   30.8   0.0     1    29   181   209   181   223 0.87 WD40-like Beta Propeller Repeat
PD40                 PF07676.7     39 sp|P39839|YUXL_BACSU -            657   1.8e-25   88.1   1.5   5   5   4.9e-05     0.043   13.4   0.0     1    24   231   254   231   260 0.95 WD40-like Beta Propeller Repeat
DPPIV_N              PF00930.16   353 sp|P39839|YUXL_BACSU -            657   6.8e-16   57.8   0.1   1   3   1.3e-09   1.2e-06   27.4   0.0     2    80    23   106    22   113 0.88 Dipeptidyl peptidase IV (DPP IV) N-terminal region
DPPIV_N              PF00930.16   353 sp|P39839|YUXL_BACSU -            657   6.8e-16   57.8   0.1   2   3   1.4e-06    0.0012   17.4   0.0   258   343   167   254   156   261 0.87 Dipeptidyl peptidase IV (DPP IV) N-terminal region
Abhydrolase_5        PF12695.2    145 sp|P39839|YUXL_BACSU -            657   2.7e-15   56.3   0.0   1   1   5.8e-18   5.1e-15   55.5   0.0    12   145   445   632   432   632 0.68 Alpha/beta hydrolase family
Abhydrolase_6        PF12697.2    228 sp|P39839|YUXL_BACSU -            657   1.1e-11   45.1   0.3   1   1   7.1e-14   6.2e-11   42.6   0.3     4   220   436   636   433   644 0.72 Alpha/beta hydrolase family
Peptidase_S15        PF02129.13   272 sp|P39839|YUXL_BACSU -            657   4.9e-11   42.5   0.7   1   2   5.6e-09   4.9e-06   26.1   0.7     1   140   410   548   410   558 0.81 X-Pro dipeptidyl-peptidase (S15 family)
Peptidase_S15        PF02129.13   272 sp|P39839|YUXL_BACSU -            657   4.9e-11   42.5   0.7   2   2   2.5e-05     0.021   14.2   0.0   200   264   558   624   548   631 0.80 X-Pro dipeptidyl-peptidase (S15 family)
DLH                  PF01738.13   218 sp|P39839|YUXL_BACSU -            657   1.4e-09   37.5   0.0   1   1   3.4e-12   2.9e-09   36.5   0.0    75   193   487   636   440   652 0.77 Dienelactone hydrolase family
AXE1                 PF05448.7    320 sp|P39839|YUXL_BACSU -            657   9.9e-08   30.8   1.0   1   1   3.2e-09   2.8e-06   26.0   1.0    59   204   404   539   394   548 0.82 Acetyl xylan esterase (AXE1)
Gmad1                PF10647.4    253 sp|P39839|YUXL_BACSU -            657   3.2e-07   30.0   0.0   2   3   0.00014      0.12   11.7   0.0    19   106    61   152    45   158 0.70 Lipoprotein LpqB beta-propeller domain
Gmad1                PF10647.4    253 sp|P39839|YUXL_BACSU -            657   3.2e-07   30.0   0.0   3   3   0.00038      0.34   10.2   0.0    25    65   347   388   342   397 0.84 Lipoprotein LpqB beta-propeller domain
Abhydrolase_3        PF07859.8    211 sp|P39839|YUXL_BACSU -            657    0.0031   17.1   0.2   1   1   6.2e-05     0.054   13.0   0.0    49   208   490   632   487   635 0.61 alpha/beta hydrolase fold
PhoPQ_related        PF10142.4    367 sp|P39839|YUXL_BACSU -            657    0.0051   15.3   0.0   2   2   3.2e-05     0.028   12.9   0.0   253   311   579   640   558   654 0.82 PhoPQ-activated pathogenicity-related protein
BAAT_C               PF08840.6    213 sp|P39839|YUXL_BACSU -            657     0.013   15.2   0.0   1   1   0.00017      0.15   11.7   0.0   111   173   584   643   495   652 0.83 BAAT / Acyl-CoA thioester hydrolase C terminal
FSH1                 PF03959.8    212 sp|P39839|YUXL_BACSU -            657     0.022   14.2   0.0   1   1   4.9e-05     0.042   13.2   0.0    84   197   488   627   471   633 0.75 Serine hydrolase (FSH1)
Abhydrolase_2        PF02230.11   216 sp|P39839|YUXL_BACSU -            657     0.087   12.2   0.0   1   1   0.00024      0.21   11.0   0.0   154   201   586   634   574   638 0.89 Phospholipase/Carboxylesterase
DUF1450              PF07293.6     78 sp|O32116|YUZB_BACSU -             78   2.6e-42  142.6   0.9   1   1   5.7e-46   2.8e-42  142.5   0.9     1    78     1    78     1    78 0.99 Protein of unknown function (DUF1450)
PADR1                PF08063.7     55 sp|O32116|YUZB_BACSU -             78      0.04   13.3   0.2   1   1   1.3e-05     0.064   12.6   0.2     7    24    30    47    26    55 0.86 PADR1 (NUC008) domain
Sigma54_AID          PF00309.15    49 sp|O32116|YUZB_BACSU -             78       0.2   11.1   1.1   2   2   6.3e-05      0.31   10.5   0.1    29    44    62    77    60    78 0.93 Sigma-54 factor, Activator interacting domain (AID)
Tiny_TM_bacill       PF09680.5     24 sp|C0H3Q7|YUZJ_BACSU -             43     3e-11   42.5  13.2   1   1   4.6e-15   6.9e-11   41.3  13.2     1    22    18    39    14    41 0.96 Protein of unknown function (Tiny_TM_bacill)
FUSC_2               PF13515.1    128 sp|O32225|YVAC_BACSU -            631   6.3e-20   71.4  41.8   2   2   2.4e-23   1.2e-19   70.5  18.6     3   127   354   479   350   480 0.95 Fusaric acid resistance protein-like
FUSC                 PF04632.7    650 sp|O32225|YVAC_BACSU -            631   2.8e-12   45.8  17.2   1   2   6.6e-08   0.00033   19.2   1.0   398   641    80   332    76   339 0.75 Fusaric acid resistance protein family
FUSC                 PF04632.7    650 sp|O32225|YVAC_BACSU -            631   2.8e-12   45.8  17.2   2   2   1.2e-11     6e-08   31.5   9.3     7   263   346   597   341   628 0.80 Fusaric acid resistance protein family
Multi_Drug_Res       PF00893.14    93 sp|O32227|YVAE_BACSU -            119   1.3e-33  115.3  11.8   1   1   4.3e-37   1.3e-33  115.3  11.8     1    93     1    93     1    93 0.99 Small Multidrug Resistance protein
EamA                 PF00892.15   126 sp|O32227|YVAE_BACSU -            119   0.00095   19.2  16.3   1   1   3.7e-07    0.0011   19.0  16.3    30   125     6   101     1   102 0.76 EamA-like transporter family
EmrE                 PF13536.1    113 sp|O32227|YVAE_BACSU -            119     0.016   15.4  13.3   1   1   6.5e-06     0.019   15.1  13.3     8   108     4   104     1   109 0.68 Multidrug resistance efflux transporter
UPF0546              PF10639.4    113 sp|O32227|YVAE_BACSU -            119     0.027   14.2   4.8   1   1   1.1e-05     0.032   14.0   4.8    52   110    39    98     8   101 0.83 Uncharacterised protein family UPF0546
TPT                  PF03151.11   153 sp|O32227|YVAE_BACSU -            119     0.061   12.9  13.8   1   1   3.2e-05     0.096   12.3  13.8    83   150    35    99     2   102 0.66 Triose-phosphate Transporter family
adh_short            PF00106.20   167 sp|O32229|YVAG_BACSU -            264   3.4e-27   95.3   0.0   1   1   4.5e-30   5.6e-27   94.7   0.0     1   163     8   169     8   172 0.90 short chain dehydrogenase
adh_short_C2         PF13561.1    241 sp|O32229|YVAG_BACSU -            264     8e-24   84.7   0.0   1   1   7.9e-27   9.7e-24   84.4   0.0     5   240    16   259    13   260 0.90 Enoyl-(Acyl carrier protein) reductase
KR                   PF08659.5    181 sp|O32229|YVAG_BACSU -            264   6.6e-09   35.6   0.0   1   1   1.4e-11   1.8e-08   34.2   0.0     2   158     9   163     8   181 0.80 KR domain
Epimerase            PF01370.16   236 sp|O32229|YVAG_BACSU -            264   0.00048   19.6   0.2   1   1     2e-06    0.0024   17.3   0.1     1   147    10   161    10   186 0.66 NAD dependent epimerase/dehydratase family
Polysacc_synt_2      PF02719.10   294 sp|O32229|YVAG_BACSU -            264    0.0012   17.8   0.0   1   1   1.6e-06     0.002   17.1   0.0     2   156    11   172    10   189 0.68 Polysaccharide biosynthesis protein
NAD_binding_10       PF13460.1    183 sp|O32229|YVAG_BACSU -            264    0.0022   18.0   0.0   1   2   9.7e-06     0.012   15.6   0.0     2    73    11    95    11   186 0.68 NADH(P)-binding
Shikimate_DH         PF01488.15   135 sp|O32229|YVAG_BACSU -            264    0.0033   17.5   0.0   1   1   4.9e-06    0.0061   16.6   0.0     9    66     4    61     1    96 0.88 Shikimate / quinate 5-dehydrogenase
THF_DHG_CYH_C        PF02882.14   161 sp|O32229|YVAG_BACSU -            264    0.0066   15.5   0.1   1   1   1.2e-05     0.014   14.4   0.1    31    77     2    48     1    59 0.91 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain
F420_oxidored        PF03807.12    96 sp|O32229|YVAG_BACSU -            264     0.034   14.5   0.3   1   1   9.9e-05      0.12   12.7   0.1    10    47    19    52    11    65 0.85 NADP oxidoreductase coenzyme F420-dependent
NAD_Gly3P_dh_N       PF01210.18   157 sp|O32229|YVAG_BACSU -            264     0.044   13.5   0.1   1   1     9e-05      0.11   12.2   0.0    10    44    19    57    12    89 0.82 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus
HisG_C               PF08029.6     75 sp|O32229|YVAG_BACSU -            264     0.045   13.6   0.1   1   1   0.00013      0.16   11.9   0.0    20    68    12    60     2    63 0.89 HisG, C-terminal domain
Eno-Rase_NADH_b      PF12242.3     78 sp|O32229|YVAG_BACSU -            264     0.047   13.4   2.2   1   1   6.9e-05     0.085   12.6   1.8    37    67     6    34     2    44 0.76 NAD(P)H binding domain of trans-2-enoyl-CoA reductase
Abhydrolase_6        PF12697.2    228 sp|O32234|YVAM_BACSU -            256   1.3e-27   97.2   0.0   1   1     9e-31   1.5e-27   96.9   0.0     1   227    23   245    23   246 0.82 Alpha/beta hydrolase family
Abhydrolase_5        PF12695.2    145 sp|O32234|YVAM_BACSU -            256   5.3e-10   39.2   0.0   1   1   7.1e-13   1.2e-09   38.0   0.0    18   112    37   203    22   234 0.73 Alpha/beta hydrolase family
Abhydrolase_1        PF00561.15   230 sp|O32234|YVAM_BACSU -            256   6.7e-10   38.9   0.7   1   1   6.5e-13   1.1e-09   38.2   0.7     1    80    46   175    46   244 0.75 alpha/beta hydrolase fold
Thioesterase         PF00975.15   229 sp|O32234|YVAM_BACSU -            256     4e-06   27.2   0.0   1   1   3.3e-09   5.5e-06   26.7   0.0     3   160    24   179    22   256 0.73 Thioesterase domain
Ndr                  PF03096.9    283 sp|O32234|YVAM_BACSU -            256    0.0053   15.2   0.0   1   1   4.2e-06    0.0069   14.8   0.0    80   153    66   139    41   168 0.89 Ndr family
LIP                  PF03583.9    290 sp|O32234|YVAM_BACSU -            256    0.0078   15.4   0.0   1   1   8.1e-06     0.013   14.6   0.0    72   175    86   189    33   196 0.83 Secretory lipase
Hydrolase_4          PF12146.3     79 sp|O32234|YVAM_BACSU -            256     0.023   14.5   0.1   2   2   0.00018      0.29   11.0   0.1    37    78    39    79    36    80 0.86 Putative lysophospholipase
Abhydrolase_2        PF02230.11   216 sp|O32234|YVAM_BACSU -            256     0.033   13.6   0.0   1   1     3e-05     0.049   13.0   0.0   101   146    81   125    49   176 0.80 Phospholipase/Carboxylesterase
MarR_2               PF12802.2     62 sp|C0SPB8|YVAV_BACSU -            177   3.8e-07   29.6   0.0   1   1   7.5e-10   6.2e-07   28.9   0.0     2    54    28    79    27    86 0.92 MarR family
HTH_24               PF13412.1     48 sp|C0SPB8|YVAV_BACSU -            177   1.5e-05   24.2   0.2   1   2   1.7e-07   0.00014   21.1   0.0     7    46    35    75    29    77 0.85 Winged helix-turn-helix DNA-binding
HTH_27               PF13463.1     68 sp|C0SPB8|YVAV_BACSU -            177   4.3e-05   23.7   0.1   1   1   1.5e-07   0.00013   22.2   0.0     8    48    36    76    35    89 0.90 Winged helix DNA-binding domain
HTH_IclR             PF09339.5     52 sp|C0SPB8|YVAV_BACSU -            177   0.00091   18.7   0.0   1   1   2.1e-06    0.0017   17.8   0.0     7    39    35    67    33    78 0.84 IclR helix-turn-helix domain
MarR                 PF01047.17    59 sp|C0SPB8|YVAV_BACSU -            177   0.00096   18.8   0.1   2   2   1.1e-05    0.0088   15.7   0.1     7    45    35    74    29    78 0.85 MarR family
TrmB                 PF01978.14    68 sp|C0SPB8|YVAV_BACSU -            177    0.0011   18.6   0.8   1   1     5e-06    0.0041   16.7   0.2    19    59    43    86    39    93 0.86 Sugar-specific transcriptional regulator TrmB
Dopey_N              PF04118.9    309 sp|C0SPB8|YVAV_BACSU -            177    0.0033   16.2   1.3   2   2   9.1e-06    0.0075   15.0   0.4    19    51   145   176   136   177 0.86 Dopey, N-terminal
HTH_5                PF01022.15    47 sp|C0SPB8|YVAV_BACSU -            177    0.0055   16.3   0.1   1   1   3.1e-05     0.025   14.2   0.0    10    47    41    78    34    78 0.87 Bacterial regulatory protein, arsR family
HTH_20               PF12840.2     61 sp|C0SPB8|YVAV_BACSU -            177    0.0074   16.0   0.0   1   1   2.7e-05     0.022   14.5   0.0    16    56    37    78    31    82 0.87 Helix-turn-helix domain
DUF387               PF04079.11   159 sp|C0SPB8|YVAV_BACSU -            177      0.02   14.2   1.6   1   3   0.00024       0.2   11.0   0.1    80   148    29    99    10   102 0.65 Putative transcriptional regulators (Ypuh-like)
DUF387               PF04079.11   159 sp|C0SPB8|YVAV_BACSU -            177      0.02   14.2   1.6   2   3   5.5e-05     0.045   13.1   0.4     5    88    38   129    34   131 0.72 Putative transcriptional regulators (Ypuh-like)
DUF1323              PF07037.6    122 sp|C0SPB8|YVAV_BACSU -            177     0.035   14.2   1.0   1   1   9.5e-05     0.078   13.1   1.0     1   106    47   146    47   161 0.75 Putative transcription regulator (DUF1323)
HTH_Crp_2            PF13545.1     76 sp|C0SPB8|YVAV_BACSU -            177     0.043   13.6   0.1   1   1   0.00021      0.17   11.6   0.0    27    59    45    77    34    92 0.87 Crp-like helix-turn-helix domain
DUF885               PF05960.6    549 sp|C0SPB8|YVAV_BACSU -            177     0.044   12.9   0.1   1   1   6.1e-05      0.05   12.7   0.1    86   206    32   153     6   175 0.70 Bacterial protein of unknown function (DUF885)
rve_3                PF13683.1     67 sp|C0SPB8|YVAV_BACSU -            177     0.058   12.9   0.2   1   1    0.0002      0.17   11.4   0.2    26    55   128   157   113   158 0.81 Integrase core domain
HTH_10               PF04967.7     53 sp|C0SPB8|YVAV_BACSU -            177      0.11   12.1   0.0   1   1   0.00028      0.23   11.0   0.0    24    46    47    69    42    76 0.91 HTH DNA binding domain
HTH_26               PF13443.1     63 sp|C0SPB8|YVAV_BACSU -            177      0.12   12.6   0.4   1   1   0.00041      0.34   11.1   0.2     6    33    42    69    40    78 0.88 Cro/C1-type HTH DNA-binding domain
DUF2497              PF10691.4     73 sp|C0SPB8|YVAV_BACSU -            177      0.34   10.9   3.8   2   2   0.00084       0.7    9.9   0.8    30    60   132   163   105   176 0.69 Protein of unknown function (DUF2497)
MarC                 PF01914.12   203 sp|O32244|YVBG_BACSU -            211   1.1e-72  243.4  13.5   1   1   4.2e-76   1.3e-72  243.2  13.5     1   203     3   206     3   206 0.99 MarC family integral membrane protein
DUF4131              PF13567.1    176 sp|O32244|YVBG_BACSU -            211     0.015   14.6   4.9   1   2   0.00032      0.96    8.8   0.1    18    74    50   106    40   134 0.71 Domain of unknown function (DUF4131)
DUF809               PF05663.6    138 sp|O32244|YVBG_BACSU -            211     0.018   14.9   0.0   1   1   1.3e-05     0.039   13.8   0.0    21    64    44    88    28   112 0.85 Protein of unknown function (DUF809)
LysE                 PF01810.13   191 sp|O32244|YVBG_BACSU -            211     0.029   13.6  11.8   2   2   3.8e-05      0.11   11.7  10.7    34   188    46   198    14   201 0.69 LysE type translocator
TatC                 PF00902.13   215 sp|O32244|YVBG_BACSU -            211     0.042   13.2  11.4   2   2   7.2e-06     0.021   14.1   1.7    49   116   111   198    63   202 0.67 Sec-independent protein translocase protein (TatC)
EamA                 PF00892.15   126 sp|O32256|YVBV_BACSU -            305   1.6e-46  157.3  48.0   1   2   1.1e-27   5.5e-24   84.6  17.3     1   125    18   140    18   141 0.96 EamA-like transporter family
EamA                 PF00892.15   126 sp|O32256|YVBV_BACSU -            305   1.6e-46  157.3  48.0   2   2   6.8e-26   3.4e-22   78.8  22.7     1   126   161   287   161   287 0.95 EamA-like transporter family
EmrE                 PF13536.1    113 sp|O32256|YVBV_BACSU -            305   6.5e-06   26.3  49.8   1   3   1.1e-07   0.00054   20.1  21.4    13   110    49   145     9   149 0.83 Multidrug resistance efflux transporter
TPT                  PF03151.11   153 sp|O32256|YVBV_BACSU -            305      0.36   10.4  32.2   1   2   0.00012       0.6    9.7   5.3    83   149    74   137    38   140 0.73 Triose-phosphate Transporter family
AA_permease          PF00324.16   478 sp|O32257|YVBW_BACSU -            447   5.8e-92  308.5  50.6   1   1   1.4e-95   7.1e-92  308.2  50.6     1   460    16   438    16   446 0.91 Amino acid permease
AA_permease_2        PF13520.1    426 sp|O32257|YVBW_BACSU -            447   2.4e-41  141.6  54.9   1   1   6.7e-45   3.3e-41  141.2  54.9     6   416    17   429    13   441 0.79 Amino acid permease
Glyco_hydro_18       PF00704.23   343 sp|O32258|YVBX_BACSU -            344   1.8e-36  126.3  16.8   1   1   3.1e-40   2.3e-36  125.9  16.8    61   342    74   330    28   331 0.86 Glycosyl hydrolases family 18
LamB_YcsF            PF03746.11   242 sp|O32258|YVBX_BACSU -            344   0.00014   21.0   0.1   1   1   3.4e-08   0.00025   20.2   0.1    97   203    25   131    19   144 0.88 LamB/YcsF family
NUDIX                PF00293.23   135 sp|O06972|YVCI_BACSU -            158   2.4e-18   66.0   0.0   1   1   5.6e-22   2.8e-18   65.8   0.0     5   126     7   122     3   130 0.90 NUDIX domain
NUDIX_4              PF14815.1    114 sp|O06972|YVCI_BACSU -            158    0.0094   15.3   0.0   1   1   5.6e-06     0.028   13.8   0.0     4   106    11   118     8   125 0.82 NUDIX domain
Oxidored_nitro       PF00148.14   398 sp|O06972|YVCI_BACSU -            158      0.15   10.6   0.0   1   1     4e-05       0.2   10.2   0.0    94   179    44   140    42   149 0.88 Nitrogenase component 1 type Oxidoreductase
ATP_bind_2           PF03668.10   284 sp|O06973|YVCJ_BACSU -            295  4.6e-147  488.5   0.0   1   1  3.2e-150  5.3e-147  488.3   0.0     1   284     9   292     9   292 1.00 P-loop ATPase protein family
AAA_18               PF13238.1    129 sp|O06973|YVCJ_BACSU -            295   0.00041   20.6   0.1   1   1   3.2e-06    0.0053   17.0   0.1     1   115    12   114    12   138 0.75 AAA domain
AAA_22               PF13401.1    131 sp|O06973|YVCJ_BACSU -            295     0.011   15.9   0.1   1   2   5.5e-05     0.091   12.8   0.0     5    26    10    31     6   104 0.86 AAA domain
AAA_17               PF13207.1    121 sp|O06973|YVCJ_BACSU -            295     0.046   14.5   0.5   1   1   0.00011      0.19   12.5   0.2     2    32    12    39    11   163 0.73 AAA domain
AAA_28               PF13521.1    163 sp|O06973|YVCJ_BACSU -            295     0.054   13.4   0.0   1   1   6.8e-05      0.11   12.4   0.0     2    28    12    38    11    98 0.85 AAA domain
AAA_33               PF13671.1    143 sp|O06973|YVCJ_BACSU -            295     0.062   13.1   0.0   1   2   0.00022      0.36   10.7   0.0     1    29    11    38    11    40 0.89 AAA domain
NB-ARC               PF00931.17   287 sp|O06973|YVCJ_BACSU -            295     0.081   11.7   0.0   1   1   0.00011      0.17   10.6   0.0    15    37     5    27     2    30 0.86 NB-ARC domain
AAA_16               PF13191.1    185 sp|O06973|YVCJ_BACSU -            295     0.085   12.8   0.1   1   1   0.00019      0.31   11.0   0.0    20    44     5    29     2    34 0.85 AAA ATPase domain
DUF2075              PF09848.4    352 sp|O06973|YVCJ_BACSU -            295      0.12   11.3   0.0   1   2   0.00017      0.28   10.0   0.0     2    24    10    31     9    82 0.77 Uncharacterized conserved protein (DUF2075)
Acetyltransf_2       PF00797.12   240 sp|O06977|YVCN_BACSU -            254     3e-49  167.7   0.0   1   1   4.9e-53   3.7e-49  167.4   0.0    10   231    32   253    26   254 0.94 N-acetyltransferase
Transglut_core       PF01841.14   113 sp|O06977|YVCN_BACSU -            254      0.16   12.2   0.0   1   1   3.4e-05      0.25   11.5   0.0    43    87    59   104    34   134 0.76 Transglutaminase-like superfamily
ABC_tran             PF00005.22   137 sp|O06980|YVCR_BACSU -            259   1.2e-32  113.0   0.0   1   1   5.2e-35   2.3e-32  112.1   0.0     3   136    27   173    25   174 0.92 ABC transporter
AAA_21               PF13304.1    303 sp|O06980|YVCR_BACSU -            259   2.2e-09   37.6   0.0   1   1   3.8e-10   1.7e-07   31.5   0.0     2   299    38   206    37   209 0.77 AAA domain
AAA_17               PF13207.1    121 sp|O06980|YVCR_BACSU -            259     2e-05   25.4   0.0   1   1     8e-08   3.5e-05   24.6   0.0     2    78    38   152    37   222 0.64 AAA domain
AAA_25               PF13481.1    194 sp|O06980|YVCR_BACSU -            259   8.5e-05   22.0   0.3   1   2   0.00019     0.083   12.2   0.1    31    55    33    56    29    75 0.83 AAA domain
AAA_16               PF13191.1    185 sp|O06980|YVCR_BACSU -            259   0.00011   22.2   0.6   1   1   9.7e-07   0.00042   20.3   0.6    13    58    25    70    22   220 0.76 AAA ATPase domain
SMC_N                PF02463.14   220 sp|O06980|YVCR_BACSU -            259   0.00012   21.3   2.3   1   1   6.2e-06    0.0027   16.9   2.3    25   211    36   218    21   222 0.72 RecF/RecN/SMC N terminal domain
AAA_22               PF13401.1    131 sp|O06980|YVCR_BACSU -            259   0.00068   19.7   1.0   1   2   2.5e-05     0.011   15.8   1.2     5   122    36   202    32   209 0.59 AAA domain
DUF258               PF03193.11   161 sp|O06980|YVCR_BACSU -            259    0.0012   18.0   0.2   1   1   5.9e-06    0.0026   16.9   0.1    28    59    27    59     2    75 0.73 Protein of unknown function, DUF258
AAA_30               PF13604.1    196 sp|O06980|YVCR_BACSU -            259    0.0016   18.0   0.7   1   1   2.6e-05     0.012   15.2   0.8    13    73    30   133    22   211 0.59 AAA domain
MMR_HSR1             PF01926.18   116 sp|O06980|YVCR_BACSU -            259    0.0017   18.2   0.1   1   1   1.6e-05     0.007   16.3   0.1     2    58    38   105    37   237 0.65 50S ribosome-binding GTPase
AAA_29               PF13555.1     62 sp|O06980|YVCR_BACSU -            259     0.002   17.6   0.2   1   1   8.7e-06    0.0038   16.7   0.2    20    44    33    56    18    69 0.78 P-loop containing region of AAA domain
NTPase_1             PF03266.10   168 sp|O06980|YVCR_BACSU -            259    0.0022   17.7   0.1   1   2    0.0016      0.68    9.6   0.0     2    34    38    72    37    83 0.70 NTPase
T2SE                 PF00437.15   272 sp|O06980|YVCR_BACSU -            259    0.0023   16.8   0.2   1   1   1.2e-05    0.0053   15.7   0.2   101   151     8    57     4    69 0.83 Type II/IV secretion system protein
AAA_18               PF13238.1    129 sp|O06980|YVCR_BACSU -            259    0.0024   18.1   1.5   1   1   2.5e-05     0.011   16.0   1.5     1    21    38    58    38   224 0.86 AAA domain
SbcCD_C              PF13558.1     90 sp|O06980|YVCR_BACSU -            259    0.0025   17.7   0.0   1   1   2.6e-05     0.011   15.5   0.0    26    89   139   189   115   190 0.78 Putative exonuclease SbcCD, C subunit
Miro                 PF08477.8    119 sp|O06980|YVCR_BACSU -            259     0.003   18.0   0.0   1   1   2.9e-05     0.013   16.0   0.0     2    58    38    97    38   110 0.82 Miro-like protein
AAA_15               PF13175.1    415 sp|O06980|YVCR_BACSU -            259    0.0056   15.7   0.0   2   2    0.0012      0.52    9.3   0.0   372   412   166   206   154   208 0.92 AAA ATPase domain
cobW                 PF02492.14   178 sp|O06980|YVCR_BACSU -            259    0.0057   16.1   0.1   1   1   2.9e-05     0.013   14.9   0.0     3    23    38    59    36    85 0.75 CobW/HypB/UreG, nucleotide-binding domain
AAA_28               PF13521.1    163 sp|O06980|YVCR_BACSU -            259    0.0086   16.0   0.0   1   1     5e-05     0.022   14.7   0.0     3    32    39    68    37   103 0.82 AAA domain
SRPRB                PF09439.5    181 sp|O06980|YVCR_BACSU -            259     0.016   14.4   0.2   1   2   0.00025      0.11   11.7   0.1     6    26    38    58    33    83 0.74 Signal recognition particle receptor beta subunit
AAA_23               PF13476.1    202 sp|O06980|YVCR_BACSU -            259     0.019   15.2   2.2   1   1   7.2e-05     0.031   14.5   0.2    12    38    24    54    17    58 0.74 AAA domain
AAA_10               PF12846.2    304 sp|O06980|YVCR_BACSU -            259     0.021   14.2   0.2   1   1   0.00016      0.07   12.5   0.1     6    22    40    56    36    68 0.87 AAA-like domain
AAA_14               PF13173.1    128 sp|O06980|YVCR_BACSU -            259     0.022   14.6   0.1   1   1   0.00013     0.055   13.3   0.0     3    48    36    81    34   138 0.75 AAA domain
G-alpha              PF00503.15   389 sp|O06980|YVCR_BACSU -            259     0.029   13.0   0.1   1   2    0.0021      0.93    8.1   0.0    63   121    40   110    38   162 0.72 G-protein alpha subunit
AAA_19               PF13245.1     76 sp|O06980|YVCR_BACSU -            259     0.031   14.0   0.1   1   1   0.00087      0.38   10.5   0.0    13    32    38    56    27    62 0.84 Part of AAA domain
Rad17                PF03215.10   519 sp|O06980|YVCR_BACSU -            259     0.032   12.9   0.0   1   1   0.00011     0.048   12.3   0.0    33    92    23    80    18   108 0.75 Rad17 cell cycle checkpoint protein
Mg_chelatase         PF01078.16   207 sp|O06980|YVCR_BACSU -            259     0.036   13.2   0.1   1   2   0.00081      0.36    9.9   0.0    13    59    26    72    19    90 0.75 Magnesium chelatase, subunit ChlI
AAA_33               PF13671.1    143 sp|O06980|YVCR_BACSU -            259     0.037   13.8   1.2   1   1   0.00038      0.16   11.8   1.2     4    20    40    56    37   225 0.80 AAA domain
MobB                 PF03205.9    140 sp|O06980|YVCR_BACSU -            259     0.039   13.6   0.0   1   1   0.00019     0.083   12.5   0.0     3    22    38    57    36    68 0.88 Molybdopterin guanine dinucleotide synthesis protein B
NACHT                PF05729.7    166 sp|O06980|YVCR_BACSU -            259     0.071   12.7   0.2   1   1   0.00036      0.16   11.6   0.1     3    22    38    57    36    67 0.85 NACHT domain
KAP_NTPase           PF07693.9    325 sp|O06980|YVCR_BACSU -            259      0.08   11.9   0.3   1   1   0.00033      0.14   11.1   0.3    18    41    33    56    21   215 0.85 KAP family P-loop domain
NB-ARC               PF00931.17   287 sp|O06980|YVCR_BACSU -            259      0.11   11.3   0.1   1   1   0.00046       0.2   10.4   0.1    19    37    35    53    23    64 0.85 NB-ARC domain
Arch_ATPase          PF01637.13   234 sp|O06980|YVCR_BACSU -            259      0.12   12.0   0.1   1   1   0.00057      0.25   11.0   0.1    21    40    36    55    23   213 0.89 Archaeal ATPase
FtsX                 PF02687.16   121 sp|O06981|YVCS_BACSU -            646   6.3e-12   45.3  17.6   2   5   4.2e-16   6.3e-12   45.3  17.6     2   120    61   181    60   182 0.89 FtsX-like permease family
FtsX                 PF02687.16   121 sp|O06981|YVCS_BACSU -            646   6.3e-12   45.3  17.6   5   5   1.5e-05      0.23   11.2  11.4     2    97   533   627   525   638 0.81 FtsX-like permease family
Pro_CA               PF00484.14   153 sp|O06983|YVDA_BACSU -            197   1.8e-29  102.7   0.1   1   1   1.6e-33   2.3e-29  102.3   0.1     2   153    37   181    36   181 0.84 Carbonic anhydrase
Sulfate_transp       PF00916.15   280 sp|O06984|YVDB_BACSU -            530     2e-76  256.6  12.5   1   1   8.1e-80     2e-76  256.6  12.5     1   280   105   375   105   375 0.95 Sulfate transporter family
Sulfate_tra_GLY      PF13792.1     84 sp|O06984|YVDB_BACSU -            530   5.1e-25   86.9   2.3   1   5   2.1e-28   5.1e-25   86.9   2.3     6    83     6    82     1    83 0.94 Sulfate transporter N-terminal domain with GLY motif
STAS                 PF01740.16   117 sp|O06984|YVDB_BACSU -            530   1.8e-22   78.9   0.0   1   1   1.2e-25   3.1e-22   78.2   0.0     5   116   425   527   422   528 0.96 STAS domain
STAS_2               PF13466.1     80 sp|O06984|YVDB_BACSU -            530    0.0045   16.9   0.0   1   1   3.7e-06     0.009   16.0   0.0    11    79   443   512   434   512 0.87 STAS domain
DUF1434              PF07254.7    132 sp|O06984|YVDB_BACSU -            530      0.81    9.4   3.6   2   2   0.00034      0.85    9.4   0.3    17    59   317   360   313   373 0.67 Protein of unknown function (DUF1434)
DUF3488              PF11992.3    325 sp|O06984|YVDB_BACSU -            530       4.2    5.9  12.2   2   2     5e-05      0.12   10.9   4.2    11    95   325   409   316   415 0.88 Domain of unknown function (DUF3488)
Lysine_decarbox      PF03641.9    133 sp|O06986|YVDD_BACSU -            191   2.9e-44  150.0   0.3   1   1   2.4e-48   3.6e-44  149.8   0.3     1   133    46   176    46   176 0.99 Possible lysine decarboxylase
FAD_binding_4        PF01565.18   139 sp|O06997|YVDP_BACSU -            447   3.1e-30  104.4   0.1   1   1   6.3e-34   4.7e-30  103.8   0.1     1   138    33   168    33   169 0.97 FAD binding domain
BBE                  PF08031.7     47 sp|O06997|YVDP_BACSU -            447   1.4e-20   72.9   1.7   2   2   9.8e-24   7.3e-20   70.6   0.9     1    47   400   444   400   444 0.99 Berberine and berberine like
Multi_Drug_Res       PF00893.14    93 sp|O32262|YVDS_BACSU -            111   1.1e-23   83.4  10.4   1   1     1e-26   1.5e-23   83.0  10.4     1    93     1    89     1    89 0.98 Small Multidrug Resistance protein
EmrE                 PF13536.1    113 sp|O32262|YVDS_BACSU -            111      0.22   11.7  11.7   1   1   0.00053      0.78    9.9  11.7    28   106    19    98     1   105 0.69 Multidrug resistance efflux transporter
DUF3188              PF11384.3     49 sp|O32262|YVDS_BACSU -            111      0.27   10.8   4.3   1   1     6e-05      0.09   12.3   1.1     6    46    35    75    33    77 0.93 Protein of unknown function (DUF3188)
HlyIII               PF03006.15   222 sp|O32262|YVDS_BACSU -            111      0.35   10.2   8.4   1   1   0.00038      0.57    9.5   8.4    72   155    20    97     3   107 0.75 Haemolysin-III related
PHO4                 PF01384.15   326 sp|O32262|YVDS_BACSU -            111      0.49    8.9   6.2   1   1   0.00039      0.58    8.7   6.2    60   139    22    97     7   104 0.76 Phosphate transporter family
Phage_holin_5        PF06946.6     93 sp|O32262|YVDS_BACSU -            111      0.63   10.2   4.5   1   1    0.0004      0.59   10.3   3.7     5    80    24   101    20   110 0.80 Phage holin
Multi_Drug_Res       PF00893.14    93 sp|O06999|YVDR_BACSU -            106   5.1e-33  113.3   8.6   1   1   2.1e-36   6.2e-33  113.1   8.6     1    93     1    93     1    93 0.99 Small Multidrug Resistance protein
EmrE                 PF13536.1    113 sp|O06999|YVDR_BACSU -            106   3.6e-06   27.1  10.5   1   1   1.3e-09     4e-06   27.0  10.5     8   107     1   103     1   106 0.81 Multidrug resistance efflux transporter
EamA                 PF00892.15   126 sp|O06999|YVDR_BACSU -            106   4.2e-05   23.5  10.8   1   1   1.6e-08   4.8e-05   23.4  10.8    23   124     2   100     1   102 0.85 EamA-like transporter family
TPT                  PF03151.11   153 sp|O06999|YVDR_BACSU -            106    0.0051   16.4   7.1   1   1   2.1e-06    0.0062   16.1   7.1    71   149    25    98     1    99 0.78 Triose-phosphate Transporter family
DUF1049              PF06305.6     68 sp|O06999|YVDR_BACSU -            106      0.87    9.1   4.0   2   2   9.7e-05      0.29   10.6   0.6    10    39    74   103    70   106 0.81 Protein of unknown function (DUF1049)
DUF3237              PF11578.3    150 sp|O07005|YVEG_BACSU -            156   1.1e-42  144.8   0.0   1   1   8.6e-47   1.3e-42  144.6   0.0     1   150     7   155     7   155 0.97 Protein of unknown function (DUF3237)
Wzz                  PF02706.10   152 sp|P71050|YVEK_BACSU -            234   6.8e-27   94.1   2.2   1   1   1.8e-30   8.8e-27   93.7   2.2     3   151     5   138     3   139 0.94 Chain length determinant protein
GNVR                 PF13807.1     82 sp|P71050|YVEK_BACSU -            234   0.00037   20.1   0.1   3   3   7.4e-08   0.00037   20.1   0.1    18    79   131   192   112   195 0.85 G-rich domain on putative tyrosine kinase
SDF                  PF00375.13   390 sp|P71050|YVEK_BACSU -            234      0.03   13.0   0.1   1   1   6.8e-06     0.033   12.9   0.1    70   137    17    86     4   204 0.75 Sodium:dicarboxylate symporter family
AAA_31               PF13614.1    157 sp|P71051|YVEL_BACSU -            227     3e-27   95.4   0.0   1   1   2.7e-30   3.9e-27   95.0   0.0     1   151    45   188    45   193 0.96 AAA domain
CbiA                 PF01656.18   195 sp|P71051|YVEL_BACSU -            227     2e-10   40.4   0.3   1   1   2.1e-13   3.1e-10   39.7   0.3     3   166    49   225    47   226 0.71 CobQ/CobB/MinD/ParA nucleotide binding domain
SRP54                PF00448.17   196 sp|P71051|YVEL_BACSU -            227    0.0035   16.7   0.1   1   2   1.6e-05     0.023   14.1   0.0     9    47    53    91    45   126 0.79 SRP54-type protein, GTPase domain
AAA_25               PF13481.1    194 sp|P71051|YVEL_BACSU -            227     0.014   14.8   0.0   1   1   2.2e-05     0.032   13.6   0.0    42   150    54   162    43   170 0.67 AAA domain
Ketoacyl-synt_2      PF13723.1    218 sp|P71051|YVEL_BACSU -            227     0.015   14.5   0.1   1   2   4.6e-05     0.068   12.4   0.0   106   156    49    98    38   137 0.80 Beta-ketoacyl synthase, N-terminal domain
HEM4                 PF02602.10   231 sp|P71051|YVEL_BACSU -            227     0.018   14.3   0.1   1   1   2.3e-05     0.035   13.3   0.0   100   137    58    94    40   149 0.83 Uroporphyrinogen-III synthase HemD
Fer4_NifH            PF00142.13   273 sp|P71051|YVEL_BACSU -            227     0.028   13.6   0.1   1   1   4.2e-05     0.062   12.4   0.0    10    60    55   106    51   129 0.80 4Fe-4S iron sulfur cluster binding proteins, NifH/frxC family
AAA_19               PF13245.1     76 sp|P71051|YVEL_BACSU -            227     0.068   12.9   0.1   1   2   0.00027      0.39   10.4   0.0    10    48    45    80    40    86 0.71 Part of AAA domain
CW_binding_2         PF04122.7     92 sp|P71051|YVEL_BACSU -            227      0.62   10.2   3.6   1   2   0.00052      0.78    9.9   0.4    29    91    48   117    20   118 0.69 Putative cell wall binding repeat 2
ABC_tran             PF00005.22   137 sp|O07016|YVFR_BACSU -            301   3.8e-33  114.6   0.2   1   2   1.9e-34   1.2e-31  109.8   0.0     1   136    21   158    21   159 0.93 ABC transporter
AAA_21               PF13304.1    303 sp|O07016|YVFR_BACSU -            301   1.4e-16   61.3   0.0   1   2   2.2e-07   0.00014   21.9   0.0     1    42    33    79    33    87 0.83 AAA domain
AAA_21               PF13304.1    303 sp|O07016|YVFR_BACSU -            301   1.4e-16   61.3   0.0   2   2   4.8e-12   3.1e-09   37.2   0.0   229   298   123   189    90   191 0.84 AAA domain
SbcCD_C              PF13558.1     90 sp|O07016|YVFR_BACSU -            301   3.9e-07   29.8   0.3   1   2   8.4e-06    0.0054   16.6   0.0    23    87   121   172   103   175 0.80 Putative exonuclease SbcCD, C subunit
SMC_N                PF02463.14   220 sp|O07016|YVFR_BACSU -            301     4e-07   29.4   0.3   1   2   7.7e-05     0.049   12.8   0.1    24    45    31    52     6    64 0.76 RecF/RecN/SMC N terminal domain
SMC_N                PF02463.14   220 sp|O07016|YVFR_BACSU -            301     4e-07   29.4   0.3   2   2   2.3e-05     0.015   14.5   0.0   133   198   127   188    71   207 0.81 RecF/RecN/SMC N terminal domain
AAA_15               PF13175.1    415 sp|O07016|YVFR_BACSU -            301   1.8e-05   24.0   0.6   1   2   7.2e-05     0.046   12.7   0.1    17    52    25    71    11   131 0.79 AAA ATPase domain
AAA_15               PF13175.1    415 sp|O07016|YVFR_BACSU -            301   1.8e-05   24.0   0.6   2   2    0.0012       0.8    8.6   0.0   367   410   149   188   106   189 0.74 AAA ATPase domain
AAA_23               PF13476.1    202 sp|O07016|YVFR_BACSU -            301   2.2e-05   24.8   0.7   1   1     1e-07   6.6e-05   23.3   0.7    14    78    23   100     6   294 0.73 AAA domain
AAA_29               PF13555.1     62 sp|O07016|YVFR_BACSU -            301   0.00039   19.8   0.0   1   1   1.5e-06   0.00098   18.6   0.0    16    52    25    61    18    70 0.81 P-loop containing region of AAA domain
AAA_16               PF13191.1    185 sp|O07016|YVFR_BACSU -            301   0.00046   20.2   0.3   1   1   3.3e-06    0.0022   18.0   0.3    20   169    27   200    13   298 0.67 AAA ATPase domain
DUF258               PF03193.11   161 sp|O07016|YVFR_BACSU -            301    0.0015   17.7   0.0   1   1   4.7e-06     0.003   16.7   0.0    15    66    10    62     2    71 0.84 Protein of unknown function, DUF258
IstB_IS21            PF01695.12   178 sp|O07016|YVFR_BACSU -            301    0.0016   17.8   0.0   2   2    0.0011       0.7    9.2   0.0    99   154   139   193   118   201 0.81 IstB-like ATP binding protein
Thymidylate_kin      PF02223.12   186 sp|O07016|YVFR_BACSU -            301    0.0025   17.2   0.0   1   1   1.3e-05    0.0081   15.5   0.0     3    49    38    84    36   100 0.89 Thymidylate kinase
AAA_22               PF13401.1    131 sp|O07016|YVFR_BACSU -            301    0.0046   17.1   0.4   1   2   0.00026      0.17   12.0   0.1     3    28    30    55    28   157 0.63 AAA domain
Arch_ATPase          PF01637.13   234 sp|O07016|YVFR_BACSU -            301    0.0058   16.3   0.0   1   1   8.3e-05     0.053   13.2   0.0     2    45    15    56    14    78 0.85 Archaeal ATPase
AAA_14               PF13173.1    128 sp|O07016|YVFR_BACSU -            301     0.025   14.4   0.1   1   2    0.0013      0.81    9.6   0.1     2    32    31    62    30   192 0.83 AAA domain
NTPase_1             PF03266.10   168 sp|O07016|YVFR_BACSU -            301      0.03   14.0   0.1   1   2    0.0012      0.75    9.4   0.0     4    27    36    59    34    80 0.88 NTPase
AAA_30               PF13604.1    196 sp|O07016|YVFR_BACSU -            301     0.033   13.7   0.1   1   1   0.00052      0.34   10.4   0.0    17    48    30    61    16    81 0.79 AAA domain
DUF4162              PF13732.1     84 sp|O07016|YVFR_BACSU -            301     0.036   14.5   0.3   1   1   0.00013     0.083   13.4   0.3     1    82   212   292   212   294 0.78 Domain of unknown function (DUF4162)
AAA_19               PF13245.1     76 sp|O07016|YVFR_BACSU -            301     0.044   13.5   0.0   1   1   0.00018      0.12   12.1   0.0    12    35    33    55    24    80 0.82 Part of AAA domain
AAA_11               PF13086.1    236 sp|O07016|YVFR_BACSU -            301     0.069   12.7   0.1   1   1    0.0002      0.13   11.8   0.1     7    44    21   150    16   300 0.57 AAA domain
AAA_5                PF07728.9    139 sp|O07016|YVFR_BACSU -            301     0.069   12.8   0.0   1   2    0.0013      0.84    9.3   0.0     4    45    36    78    34    96 0.84 AAA domain (dynein-related subfamily)
STN                  PF07660.9     52 sp|O07016|YVFR_BACSU -            301     0.072   12.6   0.1   1   1   0.00048      0.31   10.6   0.0    14    36   275   297   268   298 0.89 Secretin and TonB N terminus short domain
AAA_25               PF13481.1    194 sp|O07016|YVFR_BACSU -            301     0.077   12.3   0.1   1   1   0.00039      0.25   10.7   0.0    30    53    28    51     2    85 0.84 AAA domain
ABC2_membrane_3      PF12698.2    344 sp|O07017|YVFS_BACSU -            245   2.6e-15   56.3  27.1   1   1   2.8e-18   8.4e-15   54.6  27.1   144   342    37   235     4   236 0.86 ABC-2 family transporter protein
ABC2_membrane        PF01061.19   210 sp|O07017|YVFS_BACSU -            245   2.8e-13   49.5  19.4   1   2   9.6e-17   2.8e-13   49.5  19.4     9   204    10   206     4   210 0.86 ABC-2 type transporter
DUF4070              PF13282.1    146 sp|O07017|YVFS_BACSU -            245     0.027   13.9   0.5   1   2   0.00011      0.32   10.5   0.2    37   109    15    88     7   113 0.79 Domain of unknown function (DUF4070)
PDR_CDR              PF06422.7    103 sp|O07017|YVFS_BACSU -            245     0.036   13.7   0.7   2   2   4.1e-05      0.12   12.0   0.0    47    66   216   235   213   243 0.88 CDR ABC transporter
Sulfatase            PF00884.18   308 sp|O32206|YVGJ_BACSU -            617   1.5e-35  122.8   2.6   1   1   9.4e-39     2e-35  122.4   2.6     1   308   243   535   243   535 0.89 Sulfatase
DUF4149              PF13664.1    101 sp|O32206|YVGJ_BACSU -            617   0.00028   20.9   4.6   2   2   1.8e-07   0.00037   20.4   1.3    11    97    91   181    77   185 0.86 Domain of unknown function (DUF4149)
DUF229               PF02995.12   497 sp|O32206|YVGJ_BACSU -            617   0.00028   19.4   0.2   1   1   2.3e-07   0.00049   18.6   0.2   296   342   422   468   412   489 0.90 Protein of unknown function (DUF229)
Phosphodiest         PF01663.17   365 sp|O32206|YVGJ_BACSU -            617    0.0049   16.2   1.5   1   1   4.8e-06      0.01   15.2   0.9   210   259   432   482   291   510 0.79 Type I phosphodiesterase / nucleotide pyrophosphatase
TraF_2               PF13729.1    273 sp|O32206|YVGJ_BACSU -            617     0.006   15.4   0.1   1   1   5.2e-06     0.011   14.5   0.1    24    71   408   452   399   467 0.79 F plasmid transfer operon, TraF, protein
PIG-H                PF10181.4     69 sp|O32206|YVGJ_BACSU -            617     0.068   12.8   0.0   1   1   9.7e-05      0.21   11.2   0.0    19    60   237   278   232   287 0.85 GPI-GlcNAc transferase complex, PIG-H component
DUF1501              PF07394.7    392 sp|O32206|YVGJ_BACSU -            617      0.14   10.9   0.0   1   1   9.8e-05      0.21   10.4   0.0   255   300   422   467   402   468 0.91 Protein of unknown function (DUF1501)
SBP_bac_11           PF13531.1    230 sp|O32208|YVGL_BACSU -            260   4.7e-53  180.1   0.1   1   1     4e-56   5.4e-53  179.9   0.1     1   230    36   258    36   258 0.98 Bacterial extracellular solute-binding protein
SBP_bac_1            PF01547.20   315 sp|O32208|YVGL_BACSU -            260   8.1e-25   88.1   5.3   1   1   1.1e-27   1.5e-24   87.3   5.3     3   314    43   249    39   250 0.92 Bacterial extracellular solute-binding protein
PBP_like_2           PF12849.2    281 sp|O32208|YVGL_BACSU -            260     6e-07   29.1   2.3   1   2   2.5e-06    0.0034   16.8   0.9     2   108    28   126    26   147 0.89 PBP superfamily domain
PBP_like_2           PF12849.2    281 sp|O32208|YVGL_BACSU -            260     6e-07   29.1   2.3   2   2   7.8e-05      0.11   12.0   0.0   208   281   189   247   152   247 0.74 PBP superfamily domain
SBP_bac_6            PF13343.1    242 sp|O32208|YVGL_BACSU -            260   0.00095   18.5   0.3   2   2   2.5e-06    0.0034   16.7   0.1   132   211   181   257   153   259 0.82 Bacterial extracellular solute-binding protein
Phosphonate-bd       PF12974.2    243 sp|O32208|YVGL_BACSU -            260    0.0024   17.3   0.1   1   1   2.9e-06    0.0039   16.5   0.1    89   168   119   200   104   257 0.82 ABC transporter, phosphonate, periplasmic substrate-binding protein
SBP_bac_8            PF13416.1    281 sp|O32208|YVGL_BACSU -            260    0.0032   17.2   2.5   1   1   0.00049      0.66    9.6   2.5   162   254   164   252    31   259 0.75 Bacterial extracellular solute-binding protein
DUF3393              PF11873.3    204 sp|O32208|YVGL_BACSU -            260      0.02   14.4   0.2   1   1   2.7e-05     0.037   13.5   0.2     4    85     9   101     4   106 0.77 Domain of unknown function (DUF3393)
DUF2811              PF10929.3     57 sp|O32208|YVGL_BACSU -            260     0.076   13.0   0.0   1   1   0.00012      0.17   11.9   0.0    26    47     4    25     1    28 0.89 Protein of unknown function (DUF2811)
CDK5_activator       PF03261.10   346 sp|O32208|YVGL_BACSU -            260     0.079   12.2   0.1   1   1   6.7e-05      0.09   12.0   0.1    45   109     2    62     1   153 0.77 Cyclin-dependent kinase 5 activator protein
BPD_transp_1         PF00528.17   185 sp|O32209|YVGM_BACSU -            227   4.2e-22   78.5  21.2   1   1   2.8e-26   4.2e-22   78.5  21.2     1   176    35   221    31   223 0.90 Binding-protein-dependent transport system inner membrane component
UPF0126              PF03458.8     81 sp|O32216|YVGT_BACSU -            202   8.3e-42  140.6  19.6   1   2   4.1e-24   6.1e-20   70.6   5.6     2    79     4    81     3    83 0.92 UPF0126 domain
UPF0126              PF03458.8     81 sp|O32216|YVGT_BACSU -            202   8.3e-42  140.6  19.6   2   2   8.4e-26   1.2e-21   76.0   6.1     3    74    92   162    91   168 0.95 UPF0126 domain
LytR_cpsA_psr        PF03816.9    149 sp|P96499|YVHJ_BACSU -            391   5.5e-53  178.8   1.1   1   1   1.9e-56   9.2e-53  178.1   1.1     1   149    95   248    95   248 0.95 Cell envelope-related transcriptional attenuator domain
Imm39                PF15600.1    187 sp|P96499|YVHJ_BACSU -            391     0.028   14.2   0.1   1   1   1.4e-05     0.067   13.0   0.1    16    75   232   292   226   303 0.74 Immunity protein 39
DUF161               PF02588.10    82 sp|O34792|YVJA_BACSU -            281   3.6e-22   78.4  29.9   1   2   8.9e-13   6.6e-09   35.9  10.9     2    81    14    93    13    94 0.95 Uncharacterized BCR, YitT family COG1284
DUF161               PF02588.10    82 sp|O34792|YVJA_BACSU -            281   3.6e-22   78.4  29.9   2   2   9.4e-17     7e-13   48.6  11.0     2    82   108   188   107   188 0.98 Uncharacterized BCR, YitT family COG1284
DUF2179              PF10035.4     55 sp|O34792|YVJA_BACSU -            281   6.3e-22   76.9   0.1   1   1   1.9e-25   1.4e-21   75.7   0.1     1    55   221   275   221   275 0.99 Uncharacterized protein conserved in bacteria (DUF2179)
MFS_1                PF07690.11   352 sp|O34502|YVKA_BACSU -            444   8.7e-56  189.1  60.6   1   3   3.4e-40   1.3e-36  126.1  29.7     1   187    13   197    13   238 0.81 Major Facilitator Superfamily
MFS_1                PF07690.11   352 sp|O34502|YVKA_BACSU -            444   8.7e-56  189.1  60.6   3   3   3.8e-21   1.4e-17   63.4  25.5     3   170   263   429   261   444 0.90 Major Facilitator Superfamily
Sugar_tr             PF00083.19   451 sp|O34502|YVKA_BACSU -            444   4.6e-08   32.0  11.1   1   3   1.2e-11   4.6e-08   32.0  11.1    26   192    27   184    12   192 0.84 Sugar (and other) transporter
MFS_3                PF05977.8    524 sp|O34502|YVKA_BACSU -            444   8.4e-07   27.4  30.1   1   2   3.9e-09   1.5e-05   23.3   9.8    20   195    18   190     8   207 0.78 Transmembrane secretion effector
MFS_3                PF05977.8    524 sp|O34502|YVKA_BACSU -            444   8.4e-07   27.4  30.1   2   2   3.9e-05      0.15   10.1  12.3   227   385   265   427   250   443 0.85 Transmembrane secretion effector
MFS_2                PF13347.1    428 sp|O34502|YVKA_BACSU -            444     0.048   12.0  45.6   1   3   2.9e-05      0.11   10.9   7.1   260   348    43   129     5   158 0.87 MFS/sugar transport protein
PPDK_N               PF01326.14   329 sp|O34796|YVKC_BACSU -            831   2.5e-95  319.2   0.1   1   1   5.8e-99   4.3e-95  318.5   0.1     4   318    13   305     9   313 0.95 Pyruvate phosphate dikinase, PEP/pyruvate binding domain
PEP-utilizers        PF00391.18    81 sp|O34796|YVKC_BACSU -            831     6e-25   86.6   0.1   1   1   1.9e-28   1.4e-24   85.4   0.1     5    81   749   823   745   823 0.93 PEP-utilising enzyme, mobile domain
MFS_1                PF07690.11   352 sp|O34307|YVMA_BACSU -            403   2.9e-52  177.5  45.4   1   2   1.2e-55   2.9e-52  177.5  45.4     1   352    15   355    15   355 0.88 Major Facilitator Superfamily
MFS_3                PF05977.8    524 sp|O34307|YVMA_BACSU -            403     1e-09   37.1  23.8   1   1   5.1e-13   1.3e-09   36.8  23.8    41   367    41   362    11   400 0.80 Transmembrane secretion effector
MFS_2                PF13347.1    428 sp|O34307|YVMA_BACSU -            403   8.4e-08   31.0  36.9   1   1   3.1e-10   7.6e-07   27.8  36.9    21   384    29   364     9   368 0.80 MFS/sugar transport protein
Sugar_tr             PF00083.19   451 sp|O34307|YVMA_BACSU -            403   1.7e-05   23.6  43.7   1   2   1.8e-08   4.4e-05   22.2  19.6    11   186    10   179     4   198 0.84 Sugar (and other) transporter
Sugar_tr             PF00083.19   451 sp|O34307|YVMA_BACSU -            403   1.7e-05   23.6  43.7   2   2   7.8e-05      0.19   10.2  11.7    57   166   259   366   250   395 0.80 Sugar (and other) transporter
LacY_symp            PF01306.14   413 sp|O34307|YVMA_BACSU -            403    0.0016   17.0  25.0   1   2   0.00015      0.37    9.3   9.8   224   404     9   189     2   198 0.81 LacY proton/sugar symporter
LacY_symp            PF01306.14   413 sp|O34307|YVMA_BACSU -            403    0.0016   17.0  25.0   2   2   6.8e-06     0.017   13.7   7.2    11    79   217   284   207   397 0.76 LacY proton/sugar symporter
DUF2583              PF10762.4     89 sp|O34307|YVMA_BACSU -            403       3.6    7.7   8.3   1   2   8.7e-05      0.22   11.7   0.6    26    63    39    76    31    83 0.89 Protein of unknown function (DUF2583)
Hexapep              PF00132.19    36 sp|O34993|YVOF_BACSU -            172   2.4e-14   52.1   1.7   1   2   1.4e-05       0.1   12.1   0.0    10    34    68    92    66    94 0.89 Bacterial transferase hexapeptide (six repeats)
Hexapep              PF00132.19    36 sp|O34993|YVOF_BACSU -            172   2.4e-14   52.1   1.7   2   2   8.1e-14     6e-10   38.1   1.0     2    35   107   140   106   141 0.94 Bacterial transferase hexapeptide (six repeats)
Hexapep_2            PF14602.1     34 sp|O34993|YVOF_BACSU -            172   3.7e-11   42.4   2.4   2   2   3.1e-13   2.3e-09   36.6   0.5     2    32   107   139   106   141 0.92 Hexapeptide repeat of succinyl-transferase
MFS_1                PF07690.11   352 sp|O32203|YVQJ_BACSU -            422   2.9e-23   82.1  52.2   1   2   9.4e-22     7e-18   64.4  32.3    12   351    30   367    19   368 0.80 Major Facilitator Superfamily
MFS_1                PF07690.11   352 sp|O32203|YVQJ_BACSU -            422   2.9e-23   82.1  52.2   2   2   9.3e-12   6.9e-08   31.5  12.0    20   177   250   407   246   419 0.83 Major Facilitator Superfamily
MFS_3                PF05977.8    524 sp|O32203|YVQJ_BACSU -            422   2.7e-11   42.2  19.6   1   1   4.5e-15   3.4e-11   41.9  19.6    12   406    15   415     9   421 0.85 Transmembrane secretion effector
ABC_tran             PF00005.22   137 sp|O34631|YVRA_BACSU -            442     1e-31  110.0   0.0   1   1   2.2e-34   1.7e-31  109.3   0.0     2   137    17   166    16   166 0.93 ABC transporter
AAA_21               PF13304.1    303 sp|O34631|YVRA_BACSU -            442   7.5e-13   49.0   0.1   1   2   7.7e-06     0.006   16.5   0.1     2    20    29    47    28    69 0.88 AAA domain
AAA_21               PF13304.1    303 sp|O34631|YVRA_BACSU -            442   7.5e-13   49.0   0.1   2   2   4.7e-10   3.7e-07   30.3   0.0   233   287   134   185   120   195 0.93 AAA domain
SMC_N                PF02463.14   220 sp|O34631|YVRA_BACSU -            442   3.4e-06   26.4   0.0   1   1   8.9e-09     7e-06   25.4   0.0    25   201    27   198    15   216 0.74 RecF/RecN/SMC N terminal domain
AAA_16               PF13191.1    185 sp|O34631|YVRA_BACSU -            442   1.4e-05   25.1   0.1   1   1   3.2e-08   2.5e-05   24.3   0.1    24   177    26   187    13   195 0.75 AAA ATPase domain
SbcCD_C              PF13558.1     90 sp|O34631|YVRA_BACSU -            442   7.7e-05   22.5   0.2   1   1   8.1e-07   0.00063   19.6   0.2    18    89   123   181   113   182 0.78 Putative exonuclease SbcCD, C subunit
CbiZ                 PF01955.13   191 sp|O34631|YVRA_BACSU -            442   0.00028   20.7   0.0   1   1     1e-06   0.00078   19.2   0.0     3    90   282   366   280   379 0.88 Adenosylcobinamide amidohydrolase
AAA_22               PF13401.1    131 sp|O34631|YVRA_BACSU -            442   0.00033   20.8   0.4   1   1   6.9e-06    0.0054   16.8   0.4     5   120    27   192    23   199 0.73 AAA domain
AAA_10               PF12846.2    304 sp|O34631|YVRA_BACSU -            442    0.0004   19.9   0.1   1   2   0.00051       0.4   10.0   0.1     6    34    31    59    28   116 0.82 AAA-like domain
AAA_23               PF13476.1    202 sp|O34631|YVRA_BACSU -            442   0.00043   20.6   0.2   1   1   3.9e-06     0.003   17.9   0.1    23   131    30   144    14   190 0.49 AAA domain
AAA_15               PF13175.1    415 sp|O34631|YVRA_BACSU -            442    0.0027   16.8   0.5   2   2   0.00059      0.46    9.4   0.0   368   399   152   185   133   192 0.83 AAA ATPase domain
AAA_14               PF13173.1    128 sp|O34631|YVRA_BACSU -            442    0.0041   17.0   0.1   1   2   0.00037      0.29   11.0   0.0     3    46    27    70    25    95 0.73 AAA domain
AAA_19               PF13245.1     76 sp|O34631|YVRA_BACSU -            442     0.015   15.0   0.2   1   2   0.00063       0.5   10.1   0.0    13    35    29    50    19    88 0.79 Part of AAA domain
AAA_29               PF13555.1     62 sp|O34631|YVRA_BACSU -            442     0.018   14.5   0.2   1   1   4.4e-05     0.035   13.6   0.2    22    40    25    43    15    57 0.80 P-loop containing region of AAA domain
NACHT                PF05729.7    166 sp|O34631|YVRA_BACSU -            442     0.033   13.8   0.8   1   2   0.00032      0.25   10.9   0.1     5    22    31    48    27    59 0.83 NACHT domain
AAA_5                PF07728.9    139 sp|O34631|YVRA_BACSU -            442     0.036   13.7   0.2   1   1   0.00017      0.13   11.9   0.2     4    49    31    84    29   188 0.85 AAA domain (dynein-related subfamily)
T2SE                 PF00437.15   272 sp|O34631|YVRA_BACSU -            442     0.068   12.0   0.2   1   1   0.00017      0.13   11.1   0.2   133   160    31    58    13    62 0.84 Type II/IV secretion system protein
Arch_ATPase          PF01637.13   234 sp|O34631|YVRA_BACSU -            442     0.072   12.7   0.1   1   1   0.00021      0.17   11.5   0.1    16    53    24    58    14   195 0.76 Archaeal ATPase
FecCD                PF01032.13   311 sp|O34451|YVRB_BACSU -            353   2.5e-92  309.0  37.2   1   1     2e-96   2.9e-92  308.8  37.2     2   311    25   345    24   345 0.98 FecCD transport family
Peripla_BP_2         PF01497.13   238 sp|O34805|YVRC_BACSU -            314   5.3e-46  156.6   4.2   1   1   4.1e-49   6.7e-46  156.3   4.2     1   237    60   287    60   288 0.94 Periplasmic binding protein
Peripla_BP_4         PF13407.1    257 sp|O34805|YVRC_BACSU -            314   6.3e-05   22.4   1.2   1   2   3.8e-08   6.3e-05   22.4   1.2    43   121   101   179    82   194 0.81 Periplasmic binding protein domain
NCKAP5               PF15246.1    318 sp|O34805|YVRC_BACSU -            314    0.0075   15.6   2.3   2   2   4.6e-06    0.0077   15.6   0.2   101   185   166   249   154   282 0.81 Nck-associated protein 5, Peripheral clock protein
DUF4425              PF14466.1    121 sp|O34805|YVRC_BACSU -            314     0.021   14.9   0.5   1   1   4.6e-05     0.076   13.1   0.0     4    42    11    52     9    71 0.80 Domain of unknown function (DUF4425)
KdpD                 PF02702.12   211 sp|O34805|YVRC_BACSU -            314     0.025   13.7   1.4   1   2   3.6e-05     0.059   12.4   0.4    71   156   101   178    81   200 0.79 Osmosensitive K+ channel His kinase sensor domain
DUF3837              PF12939.2    102 sp|O34805|YVRC_BACSU -            314     0.025   14.5   0.5   1   2   0.00036       0.6   10.1   0.0     9    53    50    94    44   108 0.79 Domain of unknown function (DUF3837)
Prominin             PF05478.6    807 sp|O34805|YVRC_BACSU -            314     0.054   11.0   0.6   1   1   4.1e-05     0.068   10.6   0.6   205   275   123   193    72   198 0.82 Prominin
Pro_dh               PF01619.13   313 sp|O34805|YVRC_BACSU -            314     0.082   11.8   0.5   1   1   7.9e-05      0.13   11.2   0.5    18   111   150   242   131   247 0.86 Proline dehydrogenase
LPAM_2               PF13627.1     24 sp|O34805|YVRC_BACSU -            314     0.085   12.5   2.3   1   1     8e-05      0.13   11.9   2.3     2    16     8    22     7    23 0.92 Prokaryotic lipoprotein-attachment site
adh_short_C2         PF13561.1    241 sp|O34782|YVRD_BACSU -            263   2.3e-32  112.6   1.0   1   1   1.3e-35   2.7e-32  112.4   1.0     5   240    16   259    13   260 0.93 Enoyl-(Acyl carrier protein) reductase
adh_short            PF00106.20   167 sp|O34782|YVRD_BACSU -            263   2.7e-31  108.7   0.0   1   1   2.2e-34   4.6e-31  107.9   0.0     2   163     9   169     8   172 0.94 short chain dehydrogenase
KR                   PF08659.5    181 sp|O34782|YVRD_BACSU -            263   2.4e-09   37.1   0.0   1   1   1.8e-12   3.7e-09   36.4   0.0     3   117    10   118     9   172 0.87 KR domain
Epimerase            PF01370.16   236 sp|O34782|YVRD_BACSU -            263   0.00033   20.1   0.3   1   1   4.1e-07   0.00087   18.7   0.3     1   104    10   119    10   182 0.62 NAD dependent epimerase/dehydratase family
NAD_binding_10       PF13460.1    183 sp|O34782|YVRD_BACSU -            263     0.029   14.3   0.8   1   1   2.3e-05      0.05   13.6   0.6     1    59    10    72    10   173 0.86 NADH(P)-binding
Eno-Rase_NADH_b      PF12242.3     78 sp|O34782|YVRD_BACSU -            263     0.076   12.8   0.1   1   1   0.00011      0.22   11.3   0.1    40    66     8    33     4    43 0.75 NAD(P)H binding domain of trans-2-enoyl-CoA reductase
SGL                  PF08450.7    246 sp|O34940|YVRE_BACSU -            292   2.2e-82  276.1   0.0   1   1   6.8e-86   2.5e-82  275.9   0.0     2   246    14   256    13   256 0.99 SMP-30/Gluconolaconase/LRE-like region
Reg_prop             PF07494.6     24 sp|O34940|YVRE_BACSU -            292   0.00098   18.8   0.1   1   2   0.00012      0.46   10.6   0.0     6    23    98   115    95   116 0.81 Two component regulator propeller
DUF4585              PF15232.1     76 sp|O34940|YVRE_BACSU -            292     0.008   16.0   0.0   2   2   3.2e-05      0.12   12.2   0.0    20    40   157   177   148   182 0.91 Domain of unknown function (DUF4585)
DUF2848              PF11010.3    194 sp|O34940|YVRE_BACSU -            292     0.076   12.4   0.0   1   1   3.8e-05      0.14   11.6   0.0   131   182    81   132    63   139 0.90 Protein of unknown function (DUF2848)
MacB_PCD             PF12704.2    232 sp|P46324|YVRN_BACSU -            409   2.7e-50  171.1   0.1   1   2   5.4e-54   2.7e-50  171.1   0.1     2   225     9   242     8   249 0.89 MacB-like periplasmic core domain
FtsX                 PF02687.16   121 sp|P46324|YVRN_BACSU -            409   3.7e-21   75.1  19.7   2   2     2e-24   9.7e-21   73.7  14.4     3   121   290   402   288   402 0.97 FtsX-like permease family
DASH_Dam1            PF08653.5     58 sp|P46324|YVRN_BACSU -            409     0.053   13.2   0.4   1   1   2.7e-05      0.13   12.0   0.1    15    45   260   290   252   294 0.85 DASH complex subunit Dam1
ABC_tran             PF00005.22   137 sp|O34979|YVRO_BACSU -            229   5.7e-36  123.8   0.0   1   1   1.3e-38   8.5e-36  123.2   0.0     1   136    21   169    21   170 0.92 ABC transporter
AAA_21               PF13304.1    303 sp|O34979|YVRO_BACSU -            229   8.9e-15   55.4   0.0   1   2   1.3e-06   0.00088   19.3   0.1     1    32    33    62    33    97 0.66 AAA domain
AAA_21               PF13304.1    303 sp|O34979|YVRO_BACSU -            229   8.9e-15   55.4   0.0   2   2   2.4e-11   1.6e-08   34.8   0.0   219   300   123   202    65   205 0.79 AAA domain
SMC_N                PF02463.14   220 sp|O34979|YVRO_BACSU -            229   6.3e-09   35.3   0.0   1   2   0.00018      0.12   11.5   0.0    24    44    31    51    11    59 0.86 RecF/RecN/SMC N terminal domain
SMC_N                PF02463.14   220 sp|O34979|YVRO_BACSU -            229   6.3e-09   35.3   0.0   2   2   1.1e-07   7.3e-05   22.0   0.0   125   211   124   213    71   218 0.80 RecF/RecN/SMC N terminal domain
AAA_29               PF13555.1     62 sp|O34979|YVRO_BACSU -            229   0.00022   20.6   0.0   1   1   6.4e-07   0.00043   19.7   0.0    22    41    30    49    22    59 0.84 P-loop containing region of AAA domain
AAA_10               PF12846.2    304 sp|O34979|YVRO_BACSU -            229    0.0005   19.5   0.1   1   2   4.3e-06    0.0029   17.1   0.0     4    22    34    52    32    91 0.86 AAA-like domain
AAA_22               PF13401.1    131 sp|O34979|YVRO_BACSU -            229   0.00062   19.9   0.3   1   1     2e-05     0.014   15.5   0.3     4    24    31    51    28   206 0.66 AAA domain
DUF258               PF03193.11   161 sp|O34979|YVRO_BACSU -            229   0.00077   18.6   0.0   1   1   2.4e-06    0.0016   17.6   0.0    28    55    23    51     5    74 0.83 Protein of unknown function, DUF258
AAA_33               PF13671.1    143 sp|O34979|YVRO_BACSU -            229     0.004   17.0   0.0   1   1   1.2e-05    0.0082   16.0   0.0     3   101    35   135    33   143 0.70 AAA domain
AAA_16               PF13191.1    185 sp|O34979|YVRO_BACSU -            229    0.0063   16.5   0.2   1   1   1.9e-05     0.013   15.5   0.2    22    44    29    50    20   212 0.92 AAA ATPase domain
SbcCD_C              PF13558.1     90 sp|O34979|YVRO_BACSU -            229    0.0079   16.0   0.1   1   1   8.9e-05      0.06   13.2   0.1    31    89   140   185   115   186 0.71 Putative exonuclease SbcCD, C subunit
AAA_25               PF13481.1    194 sp|O34979|YVRO_BACSU -            229     0.012   14.9   0.0   1   1   3.8e-05     0.025   13.9   0.0    30    50    28    48     9    68 0.83 AAA domain
AAA_17               PF13207.1    121 sp|O34979|YVRO_BACSU -            229     0.013   16.2   0.3   1   1   4.4e-05      0.03   15.1   0.2     3    18    35    50    33    84 0.92 AAA domain
T2SE                 PF00437.15   272 sp|O34979|YVRO_BACSU -            229     0.018   13.9   0.1   1   1   7.5e-05     0.051   12.4   0.0   116   148    19    51     2    56 0.83 Type II/IV secretion system protein
AAA_30               PF13604.1    196 sp|O34979|YVRO_BACSU -            229     0.022   14.3   0.0   1   2   0.00068      0.46   10.0   0.0    14    38    27    51    22    55 0.81 AAA domain
Arch_ATPase          PF01637.13   234 sp|O34979|YVRO_BACSU -            229      0.03   14.0   0.2   1   1   0.00035      0.23   11.1   0.2    17    39    30    50    16   209 0.86 Archaeal ATPase
AAA_18               PF13238.1    129 sp|O34979|YVRO_BACSU -            229     0.035   14.4   1.5   1   1   0.00093      0.63   10.3   1.5     2    18    35    51    34   223 0.87 AAA domain
MMR_HSR1             PF01926.18   116 sp|O34979|YVRO_BACSU -            229     0.048   13.6   0.4   1   1   0.00018      0.12   12.3   0.4     2    19    34    51    33   215 0.86 50S ribosome-binding GTPase
AAA_23               PF13476.1    202 sp|O34979|YVRO_BACSU -            229     0.055   13.7   1.5   1   1   0.00013     0.089   13.1   1.5    21    39    33    51     2   194 0.88 AAA domain
AAA_19               PF13245.1     76 sp|O34979|YVRO_BACSU -            229     0.084   12.6   0.1   1   1   0.00044       0.3   10.8   0.0    12    34    33    54    24    93 0.85 Part of AAA domain
RNA_helicase         PF00910.17   107 sp|O34979|YVRO_BACSU -            229     0.087   13.0   0.1   1   1   0.00081      0.55   10.4   0.1     2    17    35    50    34    64 0.89 RNA helicase
HlyD_2               PF12700.2    328 sp|O35007|YVRP_BACSU -            397     1e-19   70.8  22.9   1   1   1.6e-22   2.4e-19   69.6  22.9     8   327    57   378    53   379 0.86 HlyD family secretion protein
HlyD_3               PF13437.1    105 sp|O35007|YVRP_BACSU -            397     4e-10   39.9   1.6   2   2   8.6e-11   1.3e-07   31.9   0.2     1    94   187   299   187   308 0.72 HlyD family secretion protein
Biotin_lipoyl_2      PF13533.1     50 sp|O35007|YVRP_BACSU -            397   7.7e-08   31.8   0.5   1   1   5.2e-11   7.7e-08   31.8   0.5    11    49    81   119    71   120 0.94 Biotin-lipoyl like
HlyD                 PF00529.15   305 sp|O35007|YVRP_BACSU -            397   3.2e-07   29.9   3.0   1   1   3.4e-10     5e-07   29.3   3.0     9   111    80   173    77   258 0.67 HlyD family secretion protein
Biotin_lipoyl        PF00364.17    74 sp|O35007|YVRP_BACSU -            397    0.0002   20.9   3.4   1   2   1.6e-05     0.023   14.3   0.2    13    38    79   104    74   113 0.83 Biotin-requiring enzyme
PTS_EIIA_1           PF00358.15   133 sp|O35007|YVRP_BACSU -            397     0.018   14.6   0.4   1   1   3.8e-05     0.056   12.9   0.1    83   127    80   124    76   130 0.81 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1
RnfC_N               PF13375.1    101 sp|O35007|YVRP_BACSU -            397     0.023   14.3   0.5   1   1   9.7e-05      0.14   11.8   0.0    23    63    65   105    54   112 0.83 RnfC Barrel sandwich hybrid domain
PASTA                PF03793.14    63 sp|O35007|YVRP_BACSU -            397     0.029   14.0   0.7   1   2   1.9e-05     0.029   14.0   0.7    28    57    71   100    60   101 0.84 PASTA domain
Ribosomal_S30AE      PF02482.14    97 sp|P28368|YVYD_BACSU -            189     2e-30  105.0   3.0   1   1   6.1e-34     3e-30  104.5   3.0     1    96     2    97     2    98 0.95 Sigma 54 modulation protein / S30EA ribosomal protein
Aha1_N               PF09229.6    137 sp|P28368|YVYD_BACSU -            189     0.041   13.7   0.8   1   1   1.5e-05     0.073   12.8   0.8    45   117    21   100    18   107 0.58 Activator of Hsp90 ATPase, N-terminal
UPF0029              PF01205.14   110 sp|P32437|YVYE_BACSU -            217   2.6e-42  142.9   0.3   1   2   1.4e-45     7e-42  141.5   0.0     2   109    19   124    18   125 0.98 Uncharacterized protein family UPF0029
DUF1949              PF09186.6     56 sp|P32437|YVYE_BACSU -            217   2.8e-18   65.2   0.1   1   1   5.6e-22   2.8e-18   65.2   0.1     2    56   141   195   140   195 0.98 Domain of unknown function (DUF1949)
PNTB                 PF02233.11   464 sp|P32437|YVYE_BACSU -            217     0.065   12.0   0.0   1   1   1.7e-05     0.085   11.6   0.0   387   421    56    90    38   103 0.89 NAD(P) transhydrogenase beta subunit
Flagellin_C          PF00700.16    86 sp|O34366|YVZB_BACSU -            160   9.8e-33  112.1   7.0   2   2     4e-36   9.8e-33  112.1   7.0     1    86    74   159    74   159 0.99 Bacterial flagellin C-terminal helical region
Flagellin_N          PF00669.15   139 sp|O34366|YVZB_BACSU -            160   0.00015   21.5  14.7   1   3   2.3e-07   0.00057   19.6   0.0   113   139     2    28     1    28 0.93 Bacterial flagellin N-terminal helical region
Vps5                 PF09325.5    236 sp|O34366|YVZB_BACSU -            160    0.0016   17.7   0.7   1   1   1.2e-06    0.0029   16.8   0.7    37    82    71   114    68   147 0.82 Vps5 C terminal like
V-SNARE_C            PF12352.3     66 sp|O34366|YVZB_BACSU -            160    0.0069   16.4   1.9   1   2   4.1e-06      0.01   15.8   0.3    29    61    82   114    73   119 0.87 Snare region anchored in the vesicle membrane C-terminus
TMF_TATA_bd          PF12325.3    121 sp|O34366|YVZB_BACSU -            160     0.042   13.5   1.5   1   1   7.2e-05      0.18   11.5   1.5    20    92    89   159    71   160 0.86 TATA element modulatory factor 1 TATA binding
WXG100               PF06013.7     86 sp|O34366|YVZB_BACSU -            160     0.092   12.7   3.7   1   3   0.00011      0.28   11.2   0.2     4    39    72   107    69   109 0.90 Proteins of 100 residues with WXG
RelA_SpoT            PF04607.12   116 sp|P39583|YWAC_BACSU -            210   5.1e-39  132.8   2.8   1   1   5.4e-43   8.1e-39  132.2   2.8     1   115    57   178    57   179 0.97 Region found in RelA / SpoT proteins
Glyoxalase           PF00903.20   128 sp|P39586|YWBC_BACSU -            126   5.1e-17   62.0   0.1   1   1     2e-20     6e-17   61.8   0.1     1   128     4   123     4   123 0.88 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily
Glyoxalase_2         PF12681.2    108 sp|P39586|YWBC_BACSU -            126   3.5e-16   59.7   0.0   1   1   1.4e-19     4e-16   59.5   0.0     1   108    10   124    10   124 0.80 Glyoxalase-like domain
Glyoxalase_4         PF13669.1    109 sp|P39586|YWBC_BACSU -            126   8.6e-15   54.6   0.0   1   1   3.5e-18     1e-14   54.4   0.0     1   109     6   112     6   112 0.95 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily
Glyoxalase_3         PF13468.1    175 sp|P39586|YWBC_BACSU -            126   1.1e-05   25.4   0.1   1   1   1.8e-08   5.3e-05   23.1   0.1     1    96     5    90     5   124 0.75 Glyoxalase-like domain
Y_Y_Y                PF07495.8     66 sp|P39586|YWBC_BACSU -            126       0.1   12.3   0.1   1   1   6.8e-05       0.2   11.4   0.1     5    25   105   124   101   126 0.86 Y_Y_Y domain
Methyltrans_SAM      PF10672.4    286 sp|P39587|YWBD_BACSU -            396   2.9e-34  118.2   0.0   1   1     2e-37   3.6e-34  117.9   0.0     2   274   103   379   102   394 0.83 S-adenosylmethionine-dependent methyltransferase
Cons_hypoth95        PF03602.10   183 sp|P39587|YWBD_BACSU -            396   8.3e-08   31.8   0.0   1   1   6.9e-11   1.3e-07   31.2   0.0    41   151   219   329   208   358 0.80 Conserved hypothetical protein 95
Methyltransf_26      PF13659.1    117 sp|P39587|YWBD_BACSU -            396   4.9e-05   23.3   0.0   1   1   4.6e-08   8.4e-05   22.5   0.0     2   116   222   340   221   341 0.83 Methyltransferase domain
Met_10               PF02475.11   200 sp|P39587|YWBD_BACSU -            396    0.0021   17.7   0.1   1   1   1.7e-06    0.0031   17.1   0.1    22   172   137   309   124   337 0.70 Met-10+ like-protein
MTS                  PF05175.9    170 sp|P39587|YWBD_BACSU -            396    0.0079   15.5   0.0   1   1   7.2e-06     0.013   14.8   0.0    35   136   224   335   212   368 0.65 Methyltransferase small domain
PUA                  PF01472.15    74 sp|P39587|YWBD_BACSU -            396      0.03   14.0   0.0   1   1   5.2e-05     0.097   12.4   0.0    29    52    31    55    23    60 0.86 PUA domain
tRNA_Me_trans        PF03054.11   356 sp|P39587|YWBD_BACSU -            396     0.032   12.7   0.0   1   1   2.9e-05     0.054   12.0   0.0   101   161    32    88    30   100 0.87 tRNA methyl transferase
UPF0020              PF01170.13   180 sp|P39587|YWBD_BACSU -            396     0.069   12.7   0.0   1   1   6.9e-05      0.13   11.8   0.0    26   154   218   342   194   362 0.82 Putative RNA methylase family UPF0020
MFS_1                PF07690.11   352 sp|P39589|YWBF_BACSU -            399   2.5e-27   95.5  46.4   1   2   1.3e-21   3.8e-18   65.3  28.1     5   282    17   279    15   282 0.87 Major Facilitator Superfamily
MFS_1                PF07690.11   352 sp|P39589|YWBF_BACSU -            399   2.5e-27   95.5  46.4   2   2   1.9e-14   5.5e-11   41.7  24.7     3   178   212   387   209   396 0.81 Major Facilitator Superfamily
Nuc_H_symport        PF03825.11   400 sp|P39589|YWBF_BACSU -            399   4.9e-20   71.6  30.7   1   1   2.1e-23   6.3e-20   71.3  30.7    15   366    21   358    10   381 0.82 Nucleoside H+ symporter
MFS_1_like           PF12832.2     77 sp|P39589|YWBF_BACSU -            399   1.8e-11   43.6  12.3   1   2   7.5e-14   2.2e-10   40.1   1.6     1    69     9    78     9    84 0.94 MFS_1 like family
LacY_symp            PF01306.14   413 sp|P39589|YWBF_BACSU -            399   2.6e-11   42.7  31.1   1   1   3.6e-14   1.1e-10   40.6  31.1     7   407     8   388     3   394 0.79 LacY proton/sugar symporter
MFS_2                PF13347.1    428 sp|P39589|YWBF_BACSU -            399   1.1e-10   40.5  36.7   1   3   8.1e-07    0.0024   16.3   7.1   226   332     9   115     2   124 0.67 MFS/sugar transport protein
MFS_2                PF13347.1    428 sp|P39589|YWBF_BACSU -            399   1.1e-10   40.5  36.7   2   3   3.5e-12     1e-08   34.0  28.3    23   335    30   313    28   321 0.78 MFS/sugar transport protein
MFS_2                PF13347.1    428 sp|P39589|YWBF_BACSU -            399   1.1e-10   40.5  36.7   3   3   6.1e-05      0.18   10.1   6.0    80   212   272   395   271   399 0.87 MFS/sugar transport protein
LrgB                 PF04172.11   215 sp|P39590|YWBG_BACSU -            225   7.6e-71  237.6  16.1   1   1   1.2e-74   8.5e-71  237.5  16.1     1   214    11   224    11   225 0.99 LrgB-like family
PMP1_2               PF08114.6     43 sp|P39590|YWBG_BACSU -            225      0.03   13.8   0.9   1   1   1.5e-05      0.11   12.0   0.9    17    34    96   112    88   119 0.79 ATPase proteolipid family
SSF                  PF00474.12   406 sp|P39599|YWCA_BACSU -            513  9.7e-139  462.4  44.2   1   1    8e-143  1.2e-138  462.1  44.2     1   406    33   434    33   434 1.00 Sodium:solute symporter family
GtrA                 PF04138.9    117 sp|P39602|YWCD_BACSU -            127   1.6e-27   95.7  12.9   1   1   3.6e-31   1.8e-27   95.6  12.9     2   117     2   119     1   119 0.98 GtrA-like protein
MtrC                 PF04211.8    262 sp|P39602|YWCD_BACSU -            127      0.24   10.4   5.8   1   1   5.5e-05      0.27   10.2   5.8    89   180    17   112     1   119 0.68 Tetrahydromethanopterin S-methyltransferase, subunit C
Peptidase_A25        PF03418.9    354 sp|P39603|YWCE_BACSU -             87       0.2   10.3   0.0   1   1   1.7e-05      0.25   10.0   0.0   304   336    46    78    43    86 0.90 Germination protease
Form_Nir_trans       PF01226.12   250 sp|P39608|YWCJ_BACSU -            256   1.6e-68  230.2  17.3   1   1   2.6e-72   1.9e-68  230.0  17.3     5   249     9   252     3   253 0.96 Formate/nitrite transporter
DUF202               PF02656.10    73 sp|P39608|YWCJ_BACSU -            256       1.7    8.9   7.4   1   2    0.0001      0.78   10.0   1.7    14    64    29    89    28    98 0.81 Domain of unknown function (DUF202)
Glycos_transf_2      PF00535.21   169 sp|P39614|YWDF_BACSU -            268   1.5e-32  112.6   0.0   1   1   8.1e-36     2e-32  112.1   0.0     1   168     4   163     4   164 0.98 Glycosyl transferase family 2
Glyco_tranf_2_3      PF13641.1    228 sp|P39614|YWDF_BACSU -            268   1.4e-10   41.3   0.0   1   1   8.9e-14   2.2e-10   40.7   0.0     2   190     2   180     1   200 0.75 Glycosyltransferase like family 2
Glyco_tranf_2_2      PF10111.4    281 sp|P39614|YWDF_BACSU -            268   1.3e-08   34.2   0.0   1   1   6.7e-12   1.6e-08   33.9   0.0    23   136    20   124     5   202 0.71 Glycosyltransferase like family 2
Glyco_transf_64      PF09258.5    247 sp|P39614|YWDF_BACSU -            268    0.0034   16.5   0.0   1   1   1.7e-06    0.0043   16.2   0.0     2    93     4    96     3   137 0.85 Glycosyl transferase family 64 domain
Glyco_transf_21      PF13506.1    175 sp|P39614|YWDF_BACSU -            268      0.14   11.3   0.0   1   1    0.0001      0.25   10.6   0.0    24    65    72   110    61   125 0.87 Glycosyl transferase family 21
Xan_ur_permease      PF00860.15   389 sp|P39618|YWDJ_BACSU -            440  1.5e-101  339.7  31.0   1   1  1.2e-105  1.8e-101  339.4  31.0     2   388     2   391     1   392 0.98 Permease family
DUF423               PF04241.10    89 sp|P39619|YWDK_BACSU -            123   4.8e-31  106.5   5.7   1   1   9.1e-35   6.7e-31  106.0   5.7     2    89    18   106    17   106 0.98 Protein of unknown function (DUF423)
DUF3917              PF13055.1     71 sp|P39619|YWDK_BACSU -            123     0.036   14.3   3.0   1   2   4.9e-06     0.036   14.3   3.0    35    64    67    96    48   101 0.80 Protein of unknown function (DUF3917)
MFS_1                PF07690.11   352 sp|P39637|YWFA_BACSU -            412   8.6e-62  208.8  58.3   1   2   3.5e-56   6.5e-53  179.6  38.3     3   326    25   337    17   337 0.92 Major Facilitator Superfamily
MFS_1                PF07690.11   352 sp|P39637|YWFA_BACSU -            412   8.6e-62  208.8  58.3   2   2   1.2e-14   2.2e-11   43.0  12.0    74   172   299   396   296   410 0.86 Major Facilitator Superfamily
MFS_2                PF13347.1    428 sp|P39637|YWFA_BACSU -            412     1e-15   57.1  31.9   1   2   1.5e-07   0.00027   19.4   9.1   260   382    53   169    20   171 0.89 MFS/sugar transport protein
MFS_2                PF13347.1    428 sp|P39637|YWFA_BACSU -            412     1e-15   57.1  31.9   2   2   1.5e-14   2.9e-11   42.4  20.2   156   390   154   377   143   397 0.86 MFS/sugar transport protein
Sugar_tr             PF00083.19   451 sp|P39637|YWFA_BACSU -            412   1.2e-15   57.0  37.5   1   2   9.4e-18   1.7e-14   53.2  11.1    45   189    52   190    15   208 0.92 Sugar (and other) transporter
DUF4131              PF13567.1    176 sp|P39637|YWFA_BACSU -            412     0.044   13.1   0.5   2   4   2.4e-05     0.044   13.1   0.5     2    57   161   244   156   259 0.74 Domain of unknown function (DUF4131)
FHIPEP               PF00771.15   658 sp|P39637|YWFA_BACSU -            412      0.11   10.7   0.5   2   2   0.00019      0.34    9.1   0.7   244   293   274   323   256   343 0.84 FHIPEP family
WBP-1                PF11669.3    102 sp|P39637|YWFA_BACSU -            412      0.12   12.4   0.0   1   1   0.00021      0.39   10.8   0.0    21    82   172   233   167   242 0.75 WW domain-binding protein 1
FA_desaturase        PF00487.19   257 sp|P39637|YWFA_BACSU -            412       4.6    6.5  17.3   1   2   0.00011       0.2   11.0   2.7    90   186   107   205    78   233 0.66 Fatty acid desaturase
adh_short_C2         PF13561.1    241 sp|P39644|YWFH_BACSU -            259   2.9e-18   66.5   1.5   1   1   9.3e-22   3.4e-18   66.2   1.5     5   239    12   254     9   256 0.87 Enoyl-(Acyl carrier protein) reductase
adh_short            PF00106.20   167 sp|P39644|YWFH_BACSU -            259   1.2e-13   51.3   0.0   1   1   4.7e-17   1.7e-13   50.7   0.0     2   134     5   140     4   172 0.80 short chain dehydrogenase
KR                   PF08659.5    181 sp|P39644|YWFH_BACSU -            259     2e-05   24.3   0.0   1   1   7.4e-09   2.8e-05   23.8   0.0     3   114     6   115     5   172 0.87 KR domain
NAD_binding_10       PF13460.1    183 sp|P39644|YWFH_BACSU -            259     0.094   12.7   0.1   1   1   4.8e-05      0.18   11.7   0.0     3    38     8    53     7   160 0.73 NADH(P)-binding
Chlor_dismutase      PF06778.7    193 sp|P39645|YWFI_BACSU -            254   1.9e-77  259.3   0.0   1   1   4.9e-81   2.4e-77  259.0   0.0     1   193    37   240    37   240 0.98 Chlorite dismutase
PhoPQ_related        PF10142.4    367 sp|P39645|YWFI_BACSU -            254     0.094   11.1   0.0   1   1   2.7e-05      0.13   10.6   0.0   253   301   106   154    85   169 0.87 PhoPQ-activated pathogenicity-related protein
EamA                 PF00892.15   126 sp|P39649|YWFM_BACSU -            296   1.2e-41  141.6  35.8   1   2   3.7e-24   9.2e-21   74.1  11.4     1   125    15   137    15   138 0.97 EamA-like transporter family
EamA                 PF00892.15   126 sp|P39649|YWFM_BACSU -            296   1.2e-41  141.6  35.8   2   2   4.9e-24   1.2e-20   73.8  16.5     2   125   159   281   158   282 0.92 EamA-like transporter family
UPF0546              PF10639.4    113 sp|P39649|YWFM_BACSU -            296     0.012   15.3   6.9   1   2   2.7e-05     0.068   12.9   1.1    31   111    52   135    10   137 0.81 Uncharacterised protein family UPF0546
Nuc_sug_transp       PF04142.10   244 sp|P39649|YWFM_BACSU -            296     0.015   14.3   6.4   2   2   2.3e-05     0.056   12.5   0.1    43   100   235   293   216   296 0.80 Nucleotide-sugar transporter
EmrE                 PF13536.1    113 sp|P39649|YWFM_BACSU -            296     0.094   12.9  41.9   2   4   9.9e-05      0.24   11.5   9.9    25   104    54   136    34   142 0.84 Multidrug resistance efflux transporter
EmrE                 PF13536.1    113 sp|P39649|YWFM_BACSU -            296     0.094   12.9  41.9   4   4     8e-05       0.2   11.8  14.4    32   105   207   281   179   288 0.78 Multidrug resistance efflux transporter
YtpI                 PF14007.1     89 sp|P39649|YWFM_BACSU -            296      0.11   12.4   0.3   1   2   4.4e-05      0.11   12.4   0.3    35    79   120   164   116   172 0.92 YtpI-like protein
Peptidase_M50        PF02163.17   192 sp|P70995|YWHC_BACSU -            219   3.1e-32  111.0   6.1   1   1   2.6e-36   3.9e-32  110.7   6.1     2   185    15   191    14   198 0.89 Peptidase family M50
ABC_membrane         PF00664.18   275 sp|P45861|YWJA_BACSU -            575   9.8e-56  189.1  16.3   1   1   1.7e-58   1.2e-55  188.8  16.3     2   274    17   286    16   287 0.98 ABC transporter transmembrane region
ABC_tran             PF00005.22   137 sp|P45861|YWJA_BACSU -            575     5e-37  127.2   0.0   1   1   1.4e-39     1e-36  126.2   0.0     1   137   349   498   349   498 0.92 ABC transporter
SMC_N                PF02463.14   220 sp|P45861|YWJA_BACSU -            575     8e-09   35.0   0.1   2   2     3e-10   2.2e-07   30.3   0.0   135   213   435   542   376   547 0.74 RecF/RecN/SMC N terminal domain
AAA_21               PF13304.1    303 sp|P45861|YWJA_BACSU -            575   1.7e-05   24.9   0.2   2   2    0.0001     0.076   12.9   0.0   237   294   470   524   461   525 0.93 AAA domain
AAA_16               PF13191.1    185 sp|P45861|YWJA_BACSU -            575   9.8e-05   22.4   0.2   1   1   2.7e-07    0.0002   21.3   0.2    18   178   353   516   343   531 0.58 AAA ATPase domain
DUF258               PF03193.11   161 sp|P45861|YWJA_BACSU -            575   0.00011   21.4   0.0   1   1   3.9e-07   0.00029   20.0   0.0    12    66   334   390   327   402 0.78 Protein of unknown function, DUF258
ABC_membrane_3       PF13748.1    237 sp|P45861|YWJA_BACSU -            575   0.00016   20.8   2.8   2   2   7.7e-06    0.0057   15.7   0.2   119   173   135   189   120   214 0.88 ABC transporter transmembrane region
AAA_17               PF13207.1    121 sp|P45861|YWJA_BACSU -            575    0.0012   19.6   0.0   1   1   3.1e-06    0.0023   18.7   0.0     2    32   362   399   361   520 0.72 AAA domain
AAA_29               PF13555.1     62 sp|P45861|YWJA_BACSU -            575     0.002   17.5   0.0   1   1   7.6e-06    0.0056   16.1   0.0    19    39   356   375   347   377 0.83 P-loop containing region of AAA domain
AAA                  PF00004.24   132 sp|P45861|YWJA_BACSU -            575    0.0049   17.0   0.1   1   1   0.00011     0.082   13.1   0.1     2    99   363   522   362   547 0.70 ATPase family associated with various cellular activities (AAA)
AAA_18               PF13238.1    129 sp|P45861|YWJA_BACSU -            575     0.006   16.8   0.0   1   1   7.3e-05     0.054   13.7   0.0     1    23   362   394   362   454 0.70 AAA domain
AAA_30               PF13604.1    196 sp|P45861|YWJA_BACSU -            575    0.0065   16.0   0.0   1   1   3.9e-05     0.029   13.9   0.0    20   115   361   509   353   523 0.72 AAA domain
AAA_22               PF13401.1    131 sp|P45861|YWJA_BACSU -            575    0.0092   16.1   0.2   1   1   7.8e-05     0.058   13.5   0.2     7   105   362   512   356   547 0.55 AAA domain
MobB                 PF03205.9    140 sp|P45861|YWJA_BACSU -            575     0.018   14.7   0.0   1   1   6.7e-05     0.049   13.3   0.0     2    21   361   380   360   392 0.85 Molybdopterin guanine dinucleotide synthesis protein B
SbcCD_C              PF13558.1     90 sp|P45861|YWJA_BACSU -            575     0.022   14.6   0.4   1   1   0.00016      0.12   12.3   0.4    32    89   469   513   447   514 0.75 Putative exonuclease SbcCD, C subunit
DEAD                 PF00270.24   169 sp|P45861|YWJA_BACSU -            575     0.029   13.8   0.0   1   1   0.00052      0.38   10.2   0.0    14   155   359   521   349   537 0.48 DEAD/DEAH box helicase
AAA_33               PF13671.1    143 sp|P45861|YWJA_BACSU -            575     0.039   13.8   0.0   1   1   0.00011      0.08   12.8   0.0     2    18   362   378   361   433 0.88 AAA domain
AAA_25               PF13481.1    194 sp|P45861|YWJA_BACSU -            575     0.084   12.2   0.6   1   1   0.00045      0.33   10.3   0.6    30    51   356   377   351   527 0.79 AAA domain
AAA_10               PF12846.2    304 sp|P45861|YWJA_BACSU -            575      0.13   11.7   0.4   1   1   0.00098      0.73    9.2   0.3     4    29   362   387   359   526 0.73 AAA-like domain
Mem_trans            PF03547.13   385 sp|P45869|YWKB_BACSU -            319   3.8e-50  170.3  28.2   1   2   5.3e-31   7.8e-27   93.5   7.2     6   160    10   164     5   166 0.98 Membrane transport protein
Mem_trans            PF03547.13   385 sp|P45869|YWKB_BACSU -            319   3.8e-50  170.3  28.2   2   2   4.2e-29   6.3e-25   87.2  11.0   225   384   161   314   158   315 0.94 Membrane transport protein
LacAB_rpiB           PF02502.13   140 sp|P39156|YWLF_BACSU -            149   4.8e-56  188.3   0.1   1   1   3.7e-60   5.4e-56  188.1   0.1     1   140     2   142     2   142 0.99 Ribose/Galactose Isomerase
DUF436               PF04260.7    172 sp|P39157|YWLG_BACSU -            180   3.1e-80  267.6   0.1   1   1   2.4e-84   3.6e-80  267.4   0.1     2   172     7   177     6   177 0.99 Protein of unknown function (DUF436)
Acetyltransf_4       PF13420.1    155 sp|P71043|YWNH_BACSU -            163   3.9e-20   72.3   0.0   1   1   2.9e-23   4.3e-20   72.2   0.0     1   152     3   154     3   157 0.89 Acetyltransferase (GNAT) domain
Acetyltransf_1       PF00583.19    83 sp|P71043|YWNH_BACSU -            163   3.2e-14   52.7   0.0   1   1   3.4e-17   5.1e-14   52.0   0.0     3    82    58   136    56   137 0.96 Acetyltransferase (GNAT) family
Acetyltransf_3       PF13302.1    142 sp|P71043|YWNH_BACSU -            163   2.1e-13   50.6   0.0   1   1   1.6e-16   2.4e-13   50.4   0.0     3   141     2   136     1   137 0.84 Acetyltransferase (GNAT) domain
Acetyltransf_10      PF13673.1    117 sp|P71043|YWNH_BACSU -            163   4.8e-10   39.5   0.0   1   1   3.9e-13   5.8e-10   39.3   0.0     1   117    10   136    10   136 0.80 Acetyltransferase (GNAT) domain
Acetyltransf_7       PF13508.1     79 sp|P71043|YWNH_BACSU -            163   5.9e-08   32.7   0.0   1   1   5.7e-11   8.4e-08   32.2   0.0     6    78    53   137    48   138 0.76 Acetyltransferase (GNAT) domain
Acetyltransf_8       PF13523.1    152 sp|P71043|YWNH_BACSU -            163   4.3e-05   23.4   0.0   1   1   3.5e-08   5.3e-05   23.1   0.0     1   143     3   143     3   155 0.79 Acetyltransferase (GNAT) domain
Acetyltransf_CG      PF14542.1     78 sp|P71043|YWNH_BACSU -            163     0.001   18.9   0.0   1   1   1.2e-06    0.0017   18.1   0.0     4    51    55   108    52   116 0.77 GCN5-related N-acetyl-transferase
FR47                 PF08445.5     86 sp|P71043|YWNH_BACSU -            163    0.0015   18.2   0.0   1   1   1.9e-06    0.0027   17.3   0.0    26    79    84   138    55   140 0.87 FR47-like protein
DUF3749              PF12568.3    128 sp|P71043|YWNH_BACSU -            163    0.0059   16.1   0.0   1   1   6.7e-06    0.0099   15.4   0.0    67   100    85   118    75   139 0.77 Acetyltransferase (GNAT) domain
Acetyltransf_9       PF13527.1    127 sp|P71043|YWNH_BACSU -            163     0.053   13.3   0.0   1   1   5.2e-05     0.077   12.8   0.0     2   105     3   112     2   138 0.77 Acetyltransferase (GNAT) domain
Isochorismatase      PF00857.15   174 sp|P94573|YWOC_BACSU -            189   3.1e-42  144.4   0.0   1   1   4.7e-46   3.5e-42  144.2   0.0     1   173    12   182    12   183 0.97 Isochorismatase family
MFS_1                PF07690.11   352 sp|P94574|YWOD_BACSU -            452     2e-59  201.0  43.7   1   1   6.8e-63     2e-59  201.0  43.7     2   351    15   406    14   407 0.90 Major Facilitator Superfamily
Sugar_tr             PF00083.19   451 sp|P94574|YWOD_BACSU -            452   2.6e-09   36.2  33.3   1   2   1.8e-10   5.5e-07   28.5   4.7    45   120    43   115     9   148 0.82 Sugar (and other) transporter
Sugar_tr             PF00083.19   451 sp|P94574|YWOD_BACSU -            452   2.6e-09   36.2  33.3   2   2   7.6e-07    0.0023   16.6  16.5    37   177   288   429   265   448 0.75 Sugar (and other) transporter
TRI12                PF06609.8    599 sp|P94574|YWOD_BACSU -            452     8e-05   21.0  11.2   1   3   2.7e-08     8e-05   21.0  11.2    85   321    52   273     8   289 0.73 Fungal trichothecene efflux pump (TRI12)
MFS_2                PF13347.1    428 sp|P94574|YWOD_BACSU -            452      0.03   12.7  36.2   1   2   0.00018      0.55    8.5   8.2   260   330    44   112     4   163 0.74 MFS/sugar transport protein
MFS_1_like           PF12832.2     77 sp|P94574|YWOD_BACSU -            452       1.5    8.6   9.4   2   2   9.9e-05      0.29   10.9   1.1     8    76   278   339   271   340 0.84 MFS_1 like family
MFS_1                PF07690.11   352 sp|P94577|YWOG_BACSU -            396   5.1e-51  173.4  58.2   1   2   9.7e-35   2.9e-31  108.4  31.4     2   240    16   241    15   249 0.86 Major Facilitator Superfamily
MFS_1                PF07690.11   352 sp|P94577|YWOG_BACSU -            396   5.1e-51  173.4  58.2   2   2   2.2e-23   6.5e-20   71.1  20.0    35   178   245   387   239   396 0.88 Major Facilitator Superfamily
Sugar_tr             PF00083.19   451 sp|P94577|YWOG_BACSU -            396   1.2e-09   37.2  48.8   2   3   1.8e-09   5.3e-06   25.2  21.0    44   194    44   190    16   193 0.86 Sugar (and other) transporter
Sugar_tr             PF00083.19   451 sp|P94577|YWOG_BACSU -            396   1.2e-09   37.2  48.8   3   3   4.3e-07    0.0013   17.4  18.4    18   184   215   377   210   385 0.81 Sugar (and other) transporter
MFS_3                PF05977.8    524 sp|P94577|YWOG_BACSU -            396   1.8e-08   33.0  26.7   1   2   5.2e-10   1.5e-06   26.6   6.2   222   401    15   193     9   203 0.88 Transmembrane secretion effector
MFS_3                PF05977.8    524 sp|P94577|YWOG_BACSU -            396   1.8e-08   33.0  26.7   2   2   4.5e-08   0.00013   20.2  12.5   101   394    97   382    93   395 0.83 Transmembrane secretion effector
MFS_2                PF13347.1    428 sp|P94577|YWOG_BACSU -            396   2.5e-08   32.7  41.7   1   2   3.2e-10   9.5e-07   27.5  13.0   225   380    10   157     2   165 0.81 MFS/sugar transport protein
MFS_2                PF13347.1    428 sp|P94577|YWOG_BACSU -            396   2.5e-08   32.7  41.7   2   2   2.6e-05     0.077   11.3  21.0   176   389   164   362   159   381 0.81 MFS/sugar transport protein
LacY_symp            PF01306.14   413 sp|P94577|YWOG_BACSU -            396       1.4    7.3  37.5   1   2   5.3e-05      0.16   10.5  15.7     7   174    10   171     5   202 0.72 LacY proton/sugar symporter
Sortase              PF04203.8    128 sp|P94587|YWPE_BACSU -            102   2.8e-19   68.9   0.0   1   1   4.2e-23   3.1e-19   68.8   0.0    32   128     3    95     1    95 0.88 Sortase family
G2F                  PF07474.7    193 sp|P94587|YWPE_BACSU -            102     0.019   14.3   0.0   1   1   2.7e-06      0.02   14.2   0.0   115   156    17    54     4    86 0.80 G2F domain
Hydrolase_3          PF08282.7    254 sp|P94592|YWPJ_BACSU -            285   1.4e-66  224.6   0.0   1   1   6.7e-70   1.6e-66  224.4   0.0     1   254     4   281     4   281 0.92 haloacid dehalogenase-like hydrolase
S6PP                 PF05116.8    247 sp|P94592|YWPJ_BACSU -            285   5.1e-19   68.5   0.1   1   2     5e-08   0.00012   21.4   0.0     3    74     2    71     1    88 0.77 Sucrose-6F-phosphate phosphohydrolase
S6PP                 PF05116.8    247 sp|P94592|YWPJ_BACSU -            285   5.1e-19   68.5   0.1   2   2   2.6e-15   6.5e-12   45.2   0.1   146   214   194   261   180   283 0.85 Sucrose-6F-phosphate phosphohydrolase
Hydrolase            PF00702.21   215 sp|P94592|YWPJ_BACSU -            285   1.3e-11   45.3   0.0   1   1   5.8e-14   1.4e-10   41.9   0.0     1   215     1   249     1   249 0.66 haloacid dehalogenase-like hydrolase
HAD                  PF12710.2    192 sp|P94592|YWPJ_BACSU -            285   2.8e-07   30.8   0.0   1   1   1.2e-08   2.9e-05   24.3   0.0    98   192    27   246     4   246 0.89 haloacid dehalogenase-like hydrolase
Trehalose_PPase      PF02358.11   235 sp|P94592|YWPJ_BACSU -            285   0.00033   19.6   0.0   2   2   1.2e-05     0.029   13.2   0.0   150   206   198   251   179   270 0.82 Trehalose-phosphatase
Hydrolase_6          PF13344.1    101 sp|P94592|YWPJ_BACSU -            285     0.066   13.1   0.0   1   3   0.00031      0.78    9.6   0.0     1    39     4    43     4    66 0.82 Haloacid dehalogenase-like hydrolase
SNF2_N               PF00176.18   299 sp|P94593|YWQA_BACSU -            922   1.9e-61  207.4   0.0   1   1   9.5e-65   2.8e-61  206.9   0.0     1   298   453   734   453   735 0.93 SNF2 family N-terminal domain
DUF3670              PF12419.3    141 sp|P94593|YWQA_BACSU -            922   1.4e-39  134.7   0.5   1   2   1.7e-42   5.1e-39  132.9   0.3    11   140   267   394   261   395 0.95 SNF2 Helicase protein
Helicase_C           PF00271.26    78 sp|P94593|YWQA_BACSU -            922   3.1e-16   58.9   0.0   2   2   5.3e-19   1.6e-15   56.7   0.0     4    78   787   862   784   862 0.94 Helicase conserved C-terminal domain
DEAD_2               PF06733.10   174 sp|P94593|YWQA_BACSU -            922       0.1   11.9   0.3   1   1   8.8e-05      0.26   10.6   0.1   117   163   545   587   542   595 0.73 DEAD_2
Wzz                  PF02706.10   152 sp|P96715|YWQC_BACSU -            248   3.3e-33  114.6   7.1   1   1   1.2e-36   6.1e-33  113.8   7.1     4   151     6   139     3   140 0.97 Chain length determinant protein
GNVR                 PF13807.1     82 sp|P96715|YWQC_BACSU -            248   1.3e-06   28.0   0.1   3   3   2.7e-10   1.3e-06   28.0   0.1    29    79   142   194   126   197 0.88 G-rich domain on putative tyrosine kinase
AAA_31               PF13614.1    157 sp|P96716|YWQD_BACSU -            237   1.3e-24   86.9   0.0   1   1   1.6e-27   1.7e-24   86.5   0.0     1   156    46   193    46   194 0.94 AAA domain
CbiA                 PF01656.18   195 sp|P96716|YWQD_BACSU -            237   3.4e-16   59.2   0.2   1   1   4.9e-19   5.2e-16   58.6   0.2     2   161    49   220    48   232 0.63 CobQ/CobB/MinD/ParA nucleotide binding domain
MipZ                 PF09140.6    261 sp|P96716|YWQD_BACSU -            237   1.8e-07   30.5   0.0   1   1   4.1e-10   4.3e-07   29.2   0.0     7   108    52   164    46   185 0.67 ATPase MipZ
SRP54                PF00448.17   196 sp|P96716|YWQD_BACSU -            237   5.7e-05   22.6   1.2   1   2   2.9e-07    0.0003   20.2   0.3     9    42    54    87    46   129 0.81 SRP54-type protein, GTPase domain
ArsA_ATPase          PF02374.10   305 sp|P96716|YWQD_BACSU -            237   6.2e-05   22.1   1.2   1   2   1.2e-05     0.013   14.5   0.1    11    38    56    83    45    85 0.88 Anion-transporting ATPase
AAA_25               PF13481.1    194 sp|P96716|YWQD_BACSU -            237   7.9e-05   22.1   0.0   1   1   2.9e-07   0.00031   20.2   0.0    32   150    45   162    39   163 0.66 AAA domain
Fer4_NifH            PF00142.13   273 sp|P96716|YWQD_BACSU -            237   0.00018   20.8   0.1   2   2     6e-07   0.00063   19.0   0.0    10    63    56   109    46   129 0.76 4Fe-4S iron sulfur cluster binding proteins, NifH/frxC family
AAA_19               PF13245.1     76 sp|P96716|YWQD_BACSU -            237    0.0007   19.2   0.1   1   1   2.1e-06    0.0022   17.6   0.0    10    48    46    80    39    86 0.88 Part of AAA domain
ArgK                 PF03308.11   267 sp|P96716|YWQD_BACSU -            237    0.0097   14.7   0.0   1   2   2.8e-05      0.03   13.1   0.0    34    66    50    83    24    94 0.85 ArgK protein
KTI12                PF08433.5    270 sp|P96716|YWQD_BACSU -            237     0.014   14.6   0.4   1   1   2.5e-05     0.026   13.7   0.0     7    40    52    85    45   121 0.86 Chromatin associated protein KTI12
ParA                 PF10609.4     81 sp|P96716|YWQD_BACSU -            237     0.018   14.9   0.0   1   1   4.3e-05     0.046   13.6   0.0     2    66   156   219   155   228 0.93 ParA/MinD ATPase like
YhjQ                 PF06564.7    244 sp|P96716|YWQD_BACSU -            237     0.034   13.4   0.0   1   1   5.2e-05     0.055   12.8   0.0     6   147    50   185    45   200 0.72 YhjQ protein
AAA_10               PF12846.2    304 sp|P96716|YWQD_BACSU -            237      0.11   11.9   0.0   1   1   0.00012      0.13   11.6   0.0     4    37    49    82    46   164 0.84 AAA-like domain
PHP                  PF02811.14   175 sp|P96717|YWQE_BACSU -            254   1.8e-11   44.1   0.2   1   1   3.1e-15   2.3e-11   43.8   0.2     1   165     2   165     2   213 0.80 PHP domain
Amidohydro_4         PF13147.1    304 sp|P96717|YWQE_BACSU -            254    0.0003   20.9   0.5   1   1   8.3e-08   0.00062   19.8   0.5    11    66     1    60     1   226 0.85 Amidohydrolase
UDPG_MGDP_dh_N       PF03721.9    185 sp|P96718|YWQF_BACSU -            440   1.6e-68  229.7   1.5   1   2   4.5e-71   3.9e-68  228.4   0.6     1   185     1   184     1   184 0.98 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain
UDPG_MGDP_dh         PF00984.14    96 sp|P96718|YWQF_BACSU -            440   5.8e-40  135.4   0.3   1   1   1.6e-42   1.4e-39  134.1   0.3     1    96   197   292   197   292 0.98 UDP-glucose/GDP-mannose dehydrogenase family, central domain
UDPG_MGDP_dh_C       PF03720.10   106 sp|P96718|YWQF_BACSU -            440   1.5e-30  105.4   0.1   2   2   3.1e-31   2.7e-28   98.2   0.0     1   104   313   413   313   415 0.96 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain
NAD_Gly3P_dh_N       PF01210.18   157 sp|P96718|YWQF_BACSU -            440   5.2e-08   32.7   1.2   1   2   1.9e-09   1.7e-06   27.8   0.1     1   138     2   155     2   158 0.79 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus
NAD_binding_2        PF03446.10   163 sp|P96718|YWQF_BACSU -            440     2e-07   30.9   0.2   1   2   2.2e-07    0.0002   21.2   0.1     2   111     1   137     1   159 0.83 NAD binding domain of 6-phosphogluconate dehydrogenase
ApbA                 PF02558.11   151 sp|P96718|YWQF_BACSU -            440   6.2e-06   25.7   0.1   1   1   2.8e-08   2.4e-05   23.8   0.1     1    92     3   101     3   120 0.75 Ketopantoate reductase PanE/ApbA
3HCDH_N              PF02737.13   180 sp|P96718|YWQF_BACSU -            440   2.2e-05   24.1   0.7   1   1   7.8e-08   6.8e-05   22.5   0.1     1    86     2    84     2   124 0.79 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain
F420_oxidored        PF03807.12    96 sp|P96718|YWQF_BACSU -            440   0.00017   21.9   1.6   1   3   0.00052      0.45   10.9   0.1     2    73     3    88     2   118 0.89 NADP oxidoreductase coenzyme F420-dependent
Pyr_redox            PF00070.22    80 sp|P96718|YWQF_BACSU -            440   0.00022   21.5   0.1   1   1   1.2e-06     0.001   19.3   0.0     2    33     3    34     2    69 0.79 Pyridine nucleotide-disulphide oxidoreductase
NAD_binding_7        PF13241.1    103 sp|P96718|YWQF_BACSU -            440    0.0035   17.5   0.1   1   1   4.8e-05     0.042   14.1   0.0     9    77     2    93     1   203 0.84 Putative NAD(P)-binding
TrkA_N               PF02254.13   116 sp|P96718|YWQF_BACSU -            440     0.005   16.8   1.2   1   2   0.00031      0.27   11.2   0.1     1    39     3    41     3    53 0.90 TrkA-N domain
NAD_binding_10       PF13460.1    183 sp|P96718|YWQF_BACSU -            440     0.013   15.5   3.8   1   2   0.00017      0.15   12.0   0.6     1    96     3   117     3   129 0.68 NADH(P)-binding
FAD_binding_3        PF01494.14   356 sp|P96718|YWQF_BACSU -            440     0.026   13.6   0.0   1   1   4.5e-05     0.039   13.0   0.0     4    41     3    40     1    71 0.91 FAD binding domain
DAO                  PF01266.19   358 sp|P96718|YWQF_BACSU -            440     0.044   12.6   1.6   1   2   0.00035       0.3    9.9   1.3     2    29     3    30     2    34 0.94 FAD dependent oxidoreductase
NAD_binding_8        PF13450.1     68 sp|P96718|YWQF_BACSU -            440     0.079   12.9   0.2   1   1   0.00025      0.22   11.5   0.2     1    28     5    32     5    35 0.93 NAD(P)-binding Rossmann-like domain
FMN_red              PF03358.10   152 sp|P96726|YWQN_BACSU -            181   6.8e-22   77.6   0.0   1   1   1.2e-25   8.8e-22   77.2   0.0     1   137     1   145     1   152 0.87 NADPH-dependent FMN reductase
Flavodoxin_2         PF02525.12   199 sp|P96726|YWQN_BACSU -            181   7.8e-15   54.9   0.0   1   1   1.4e-18   1.1e-14   54.4   0.0     1   181     1   160     1   177 0.73 Flavodoxin-like fold
Chromate_transp      PF02417.10   169 sp|O05215|YWRA_BACSU -            178   1.4e-41  141.9  18.0   1   1   2.1e-45   1.6e-41  141.7  18.0     3   167     4   171     2   173 0.96 Chromate transporter
DUF485               PF04341.7     91 sp|O05215|YWRA_BACSU -            178       4.6    7.0   8.3   1   2   7.9e-05      0.59    9.8   3.2    17    69    76   129    74   131 0.93 Protein of unknown function, DUF485
Chromate_transp      PF02417.10   169 sp|O05216|YWRB_BACSU -            197   5.7e-39  133.4  16.6   1   1   4.3e-43   6.3e-39  133.2  16.6     4   169     8   176     5   176 0.95 Chromate transporter
G_glu_transpept      PF01019.16   510 sp|O05218|YWRD_BACSU -            525  4.9e-165  549.8   0.0   1   1  3.7e-169  5.5e-165  549.7   0.0     2   510    25   520    24   520 0.98 Gamma-glutamyltranspeptidase
Flavin_Reduct        PF01613.13   154 sp|O05220|YWRF_BACSU -            205   3.5e-22   78.9   0.0   1   1   3.2e-26   4.7e-22   78.4   0.0     4   138    23   168    20   183 0.91 Flavin reductase like domain
ArsB                 PF02040.10   423 sp|O05224|YWRK_BACSU -            442   7.6e-73  245.8  27.8   1   1   1.4e-76     1e-72  245.4  27.8     5   422     3   436     1   437 0.92 Arsenical pump membrane protein
CitMHS               PF03600.11   351 sp|O05224|YWRK_BACSU -            442   1.7e-18   66.3  20.3   1   2   2.2e-22   1.7e-18   66.3  20.3     4   320     4   355     1   370 0.77 Citrate transporter
Hydrolase_3          PF08282.7    254 sp|P96741|YWTE_BACSU -            286   2.3e-62  210.8   1.5   1   1   1.4e-65     3e-62  210.4   1.5     1   254     4   277     4   277 0.95 haloacid dehalogenase-like hydrolase
S6PP                 PF05116.8    247 sp|P96741|YWTE_BACSU -            286   1.6e-13   50.5   0.1   1   2   6.8e-06     0.014   14.6   0.0     4    59     3    58     1    82 0.88 Sucrose-6F-phosphate phosphohydrolase
S6PP                 PF05116.8    247 sp|P96741|YWTE_BACSU -            286   1.6e-13   50.5   0.1   2   2     8e-12   1.7e-08   34.0   0.0   133   214   178   258   163   275 0.80 Sucrose-6F-phosphate phosphohydrolase
HAD                  PF12710.2    192 sp|P96741|YWTE_BACSU -            286   3.2e-08   33.9   0.0   2   2   8.7e-10   1.8e-06   28.2   0.0    95   191    24   241    15   242 0.87 haloacid dehalogenase-like hydrolase
Trehalose_PPase      PF02358.11   235 sp|P96741|YWTE_BACSU -            286   9.7e-08   31.1   0.1   2   2   1.4e-08     3e-05   23.0   0.0   132   213   176   255   171   276 0.72 Trehalose-phosphatase
Hydrolase            PF00702.21   215 sp|P96741|YWTE_BACSU -            286   2.5e-06   28.0   0.3   1   1     2e-08   4.1e-05   24.0   0.3     1   215     1   245     1   245 0.59 haloacid dehalogenase-like hydrolase
Hydrolase_6          PF13344.1    101 sp|P96741|YWTE_BACSU -            286      0.09   12.6   0.0   1   1   0.00011      0.23   11.3   0.0     1    50     4    54     4    76 0.84 Haloacid dehalogenase-like hydrolase
LytR_cpsA_psr        PF03816.9    149 sp|Q7WY78|YWTF_BACSU -            322   1.7e-42  144.8   1.6   1   1   5.9e-46   2.9e-42  144.0   1.6     1   149    95   244    95   244 0.94 Cell envelope-related transcriptional attenuator domain
DUF4179              PF13786.1     94 sp|Q7WY78|YWTF_BACSU -            322     0.078   13.2   2.2   1   3   8.8e-05      0.44   10.8   0.4     3    33     8    40     6    67 0.58 Domain of unknown function (DUF4179)
Sugar_tr             PF00083.19   451 sp|C0SPB2|YWTG_BACSU -            457  4.3e-128  427.6  20.0   1   1  2.3e-131  4.9e-128  427.5  20.0     3   450    11   438     9   439 0.96 Sugar (and other) transporter
MFS_1                PF07690.11   352 sp|C0SPB2|YWTG_BACSU -            457   6.9e-53  179.5  44.9   1   2   4.3e-46   9.1e-43  146.3  24.5     2   350    14   388    13   388 0.85 Major Facilitator Superfamily
MFS_1                PF07690.11   352 sp|C0SPB2|YWTG_BACSU -            457   6.9e-53  179.5  44.9   2   2   5.4e-16   1.1e-12   47.3  12.5    47   187   290   437   288   454 0.81 Major Facilitator Superfamily
MFS_2                PF13347.1    428 sp|C0SPB2|YWTG_BACSU -            457   4.9e-13   48.2  24.0   1   3   6.7e-09   1.4e-05   23.6   2.1   246   340    29   121    14   129 0.84 MFS/sugar transport protein
MFS_2                PF13347.1    428 sp|C0SPB2|YWTG_BACSU -            457   4.9e-13   48.2  24.0   2   3   1.7e-08   3.6e-05   22.3   8.6   137   342   129   364   123   366 0.74 MFS/sugar transport protein
MFS_2                PF13347.1    428 sp|C0SPB2|YWTG_BACSU -            457   4.9e-13   48.2  24.0   3   3   5.3e-05      0.11   10.8   0.1   140   202   373   431   368   444 0.83 MFS/sugar transport protein
ATG22                PF11700.3    477 sp|C0SPB2|YWTG_BACSU -            457   2.7e-06   26.1   7.2   1   2   1.3e-09   2.7e-06   26.1   7.2   300   443    26   158    22   191 0.81 Vacuole effluxer Atg22 like
TRI12                PF06609.8    599 sp|C0SPB2|YWTG_BACSU -            457   1.4e-05   23.4   1.7   1   2   6.8e-09   1.4e-05   23.4   1.7    93   231    58   197    34   208 0.72 Fungal trichothecene efflux pump (TRI12)
MFS_3                PF05977.8    524 sp|C0SPB2|YWTG_BACSU -            457   0.00036   18.7   6.1   1   2   1.7e-07   0.00036   18.7   6.1   243   384    32   173    20   203 0.89 Transmembrane secretion effector
MFS_1_like           PF12832.2     77 sp|C0SPB2|YWTG_BACSU -            457      0.19   11.5   0.1   1   3   8.8e-05      0.19   11.5   0.1    27    75    35    83    31    85 0.90 MFS_1 like family
Transgly_assoc       PF04226.8     48 sp|O32282|YWZA_BACSU -             81   1.1e-11   44.5  13.6   3   3     3e-15   1.1e-11   44.5  13.6     1    48    33    78    33    78 0.97 Transglycosylase associated protein
FeoB_C               PF07664.7     54 sp|O32282|YWZA_BACSU -             81       9.1    5.7   9.4   1   3    0.0002      0.73    9.2   0.7     6    29     3    26     1    30 0.85 Ferrous iron transport protein B C terminus
DUF1450              PF07293.6     78 sp|O32280|YWZC_BACSU -             74   4.1e-07   29.8   0.0   1   1   3.6e-11   5.3e-07   29.5   0.0    25    73    26    73     4    74 0.87 Protein of unknown function (DUF1450)
LrgB                 PF04172.11   215 sp|P42102|YXAC_BACSU -            230   4.6e-72  241.6  16.5   1   1   3.7e-76   5.4e-72  241.4  16.5     1   214    14   227    14   228 0.99 LrgB-like family
MFS_1                PF07690.11   352 sp|P42112|YXAM_BACSU -            399   9.4e-23   80.4  33.2   1   2   1.4e-21   2.1e-17   62.8  22.1     6   292     9   290     4   308 0.78 Major Facilitator Superfamily
MFS_1                PF07690.11   352 sp|P42112|YXAM_BACSU -            399   9.4e-23   80.4  33.2   2   2   2.5e-09   3.8e-05   22.5   4.1   104   172   314   379   304   395 0.90 Major Facilitator Superfamily
Methyltransf_11      PF08241.7     95 sp|P46326|YXBB_BACSU -            244   6.8e-25   87.3   0.0   1   1     3e-27   1.4e-24   86.3   0.0     1    95    41   139    41   139 0.98 Methyltransferase domain
Methyltransf_31      PF13847.1    152 sp|P46326|YXBB_BACSU -            244   3.8e-20   72.0   0.0   1   1     1e-22     5e-20   71.6   0.0     3   112    36   143    34   187 0.86 Methyltransferase domain
Methyltransf_23      PF13489.1    161 sp|P46326|YXBB_BACSU -            244   2.1e-16   60.0   0.0   1   1   6.2e-19     3e-16   59.5   0.0     3   156    19   188    17   199 0.75 Methyltransferase domain
Methyltransf_18      PF12847.2    112 sp|P46326|YXBB_BACSU -            244   1.4e-15   57.8   0.0   1   1   5.6e-18   2.7e-15   56.9   0.0     1   109    36   139    36   142 0.91 Methyltransferase domain
Ubie_methyltran      PF01209.13   233 sp|P46326|YXBB_BACSU -            244   5.6e-15   55.0   0.0   1   1   5.1e-17   2.5e-14   52.9   0.0    47   163    36   151    27   198 0.86 ubiE/COQ5 methyltransferase family
Methyltransf_25      PF13649.1    101 sp|P46326|YXBB_BACSU -            244   1.3e-14   54.4   0.0   1   1   6.6e-17   3.1e-14   53.1   0.0     1   101    40   135    40   135 0.95 Methyltransferase domain
Methyltransf_12      PF08242.7     99 sp|P46326|YXBB_BACSU -            244   2.2e-14   53.7   0.0   1   1   8.8e-17   4.2e-14   52.8   0.0     2    99    42   137    41   137 0.89 Methyltransferase domain
MTS                  PF05175.9    170 sp|P46326|YXBB_BACSU -            244   9.6e-11   41.3   0.0   1   1   2.9e-13   1.4e-10   40.8   0.0    25   150    30   150    26   165 0.84 Methyltransferase small domain
Methyltransf_26      PF13659.1    117 sp|P46326|YXBB_BACSU -            244     2e-09   37.5   0.0   1   1   6.7e-12   3.2e-09   36.8   0.0     3   113    39   139    37   142 0.93 Methyltransferase domain
Met_10               PF02475.11   200 sp|P46326|YXBB_BACSU -            244   9.2e-09   35.1   0.0   1   1   2.4e-11   1.2e-08   34.8   0.0    94   172    28   137    12   193 0.72 Met-10+ like-protein
PrmA                 PF06325.8    295 sp|P46326|YXBB_BACSU -            244   9.3e-08   31.5   0.0   1   1     3e-10   1.5e-07   30.8   0.0   158   232    32   111    27   145 0.72 Ribosomal protein L11 methyltransferase (PrmA)
Methyltransf_32      PF13679.1    141 sp|P46326|YXBB_BACSU -            244   9.8e-07   28.5   0.0   1   1   3.3e-09   1.6e-06   27.8   0.0    22    91    33    95     5   130 0.77 Methyltransferase domain
RrnaAD               PF00398.15   262 sp|P46326|YXBB_BACSU -            244   2.3e-05   23.5   0.0   1   1   9.1e-08   4.4e-05   22.6   0.0    30    84    36    91    22   126 0.85 Ribosomal RNA adenine dimethylase
CMAS                 PF02353.15   273 sp|P46326|YXBB_BACSU -            244   3.1e-05   23.1   0.0   1   1   8.8e-08   4.2e-05   22.7   0.0    65   242    39   224    29   237 0.79 Mycolic acid cyclopropane synthetase
Methyltransf_24      PF13578.1    106 sp|P46326|YXBB_BACSU -            244   3.5e-05   24.5   0.1   1   1   2.1e-07    0.0001   23.0   0.1     4   103    44   139    41   142 0.74 Methyltransferase domain
Methyltransf_PK      PF05891.7    218 sp|P46326|YXBB_BACSU -            244   0.00011   21.6   0.0   1   1     3e-07   0.00015   21.1   0.0    53   168    34   148    13   174 0.81 AdoMet dependent proline di-methyltransferase
Methyltransf_3       PF01596.12   205 sp|P46326|YXBB_BACSU -            244   0.00061   18.8   0.0   1   1   2.3e-06    0.0011   18.0   0.0    46   108    37    97    24   107 0.79 O-methyltransferase
Methyltransf_8       PF05148.10   219 sp|P46326|YXBB_BACSU -            244    0.0015   18.2   0.0   1   1   3.7e-05     0.017   14.7   0.0    71   157    35   140    27   159 0.69 Hypothetical methyltransferase
FtsJ                 PF01728.14   181 sp|P46326|YXBB_BACSU -            244    0.0016   18.4   0.0   1   1   8.2e-06    0.0039   17.1   0.0    21   134    35   136    21   183 0.63 FtsJ-like methyltransferase
Methyltransf_9       PF08003.6    315 sp|P46326|YXBB_BACSU -            244    0.0019   16.9   0.0   1   1   5.4e-06    0.0026   16.5   0.0   114   226    35   149    26   161 0.74 Protein of unknown function (DUF1698)
UPF0020              PF01170.13   180 sp|P46326|YXBB_BACSU -            244    0.0032   17.0   0.0   1   1     1e-05     0.005   16.4   0.0    59   112    56   110    17   111 0.83 Putative RNA methylase family UPF0020
Methyltransf_15      PF09445.5    164 sp|P46326|YXBB_BACSU -            244    0.0036   16.8   0.0   1   1     1e-05    0.0048   16.4   0.0     2    61    38    98    37   147 0.87 RNA cap guanine-N2 methyltransferase
GCD14                PF08704.5    247 sp|P46326|YXBB_BACSU -            244    0.0063   16.0   0.0   1   1   2.1e-05      0.01   15.3   0.0    42   107    38   101    31   112 0.88 tRNA methyltransferase complex GCD14 subunit
ADH_zinc_N           PF00107.21   130 sp|P46326|YXBB_BACSU -            244    0.0065   16.0   0.0   1   1   0.00015     0.071   12.6   0.0     3    88    48   140    46   159 0.61 Zinc-binding dehydrogenase
CmcI                 PF04989.7    206 sp|P46326|YXBB_BACSU -            244    0.0094   15.2   0.1   1   1   2.8e-05     0.014   14.7   0.1    34   154    38   148    31   197 0.71 Cephalosporin hydroxylase
NodS                 PF05401.6    201 sp|P46326|YXBB_BACSU -            244      0.01   15.2   0.0   1   1   3.3e-05     0.016   14.6   0.0    48   144    41   139    27   146 0.76 Nodulation protein S (NodS)
N6_N4_Mtase          PF01555.13   231 sp|P46326|YXBB_BACSU -            244      0.01   15.3   0.0   2   2   0.00093      0.45    9.9   0.0    35    75   120   160   103   205 0.77 DNA methylase
DOT1                 PF08123.8    205 sp|P46326|YXBB_BACSU -            244     0.019   14.3   0.0   1   2   0.00027      0.13   11.5   0.0     9    86     4    79     1   111 0.86 Histone methylation protein DOT1
Methyltransf_4       PF02390.12   197 sp|P46326|YXBB_BACSU -            244     0.025   13.6   0.0   1   2   0.00043       0.2   10.6   0.0    12    68    29    84    22   109 0.77 Putative methyltransferase
PCMT                 PF01135.14   210 sp|P46326|YXBB_BACSU -            244     0.071   12.6   0.1   1   1    0.0004      0.19   11.2   0.0    75   127    38    88    28   139 0.80 Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT)
adh_short_C2         PF13561.1    241 sp|P46331|YXBG_BACSU -            273   1.9e-35  122.7   0.0   1   1   1.1e-38   2.3e-35  122.5   0.0     1   240    13   253    13   254 0.92 Enoyl-(Acyl carrier protein) reductase
adh_short            PF00106.20   167 sp|P46331|YXBG_BACSU -            273   3.9e-31  108.2   0.1   1   1   2.3e-34   4.8e-31  107.9   0.1     1   164     7   171     7   174 0.96 short chain dehydrogenase
KR                   PF08659.5    181 sp|P46331|YXBG_BACSU -            273   8.2e-12   45.1   0.0   1   1   5.3e-15   1.1e-11   44.7   0.0     2   161     8   167     8   190 0.87 KR domain
Epimerase            PF01370.16   236 sp|P46331|YXBG_BACSU -            273    0.0005   19.5   0.3   1   1   3.2e-07   0.00069   19.1   0.3     2    92    10   111     9   184 0.81 NAD dependent epimerase/dehydratase family
3HCDH_N              PF02737.13   180 sp|P46331|YXBG_BACSU -            273   0.00092   18.9   0.3   1   1   7.8e-07    0.0017   18.0   0.3     6    52    13    59     8    91 0.70 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain
ADH_zinc_N           PF00107.21   130 sp|P46331|YXBG_BACSU -            273     0.057   12.9   0.3   1   1   5.6e-05      0.12   11.9   0.3     1    68    17    93    17    95 0.87 Zinc-binding dehydrogenase
2-Hacid_dh_C         PF02826.14   178 sp|P46331|YXBG_BACSU -            273      0.12   11.4   0.2   1   1    0.0001      0.21   10.7   0.2    33    75     3    46     1    64 0.82 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain
ABC_tran             PF00005.22   137 sp|P42423|YXDL_BACSU -            257     2e-35  122.0   0.0   1   1   4.8e-38   2.9e-35  121.5   0.0     1   136    23   171    23   172 0.97 ABC transporter
AAA_21               PF13304.1    303 sp|P42423|YXDL_BACSU -            257   2.3e-12   47.4   0.1   1   2   8.5e-07    0.0005   20.1   0.1     1    25    35    66    35   117 0.72 AAA domain
AAA_21               PF13304.1    303 sp|P42423|YXDL_BACSU -            257   2.3e-12   47.4   0.1   2   2   2.6e-08   1.6e-05   25.0   0.0   235   300   142   205   122   205 0.91 AAA domain
AAA_15               PF13175.1    415 sp|P42423|YXDL_BACSU -            257   6.1e-07   28.8   0.4   1   2   5.8e-05     0.034   13.1   0.2    10    56    21    76     8   148 0.77 AAA ATPase domain
AAA_15               PF13175.1    415 sp|P42423|YXDL_BACSU -            257   6.1e-07   28.8   0.4   2   2   3.1e-05     0.018   14.1   0.0   372   412   164   204   153   205 0.92 AAA ATPase domain
AAA_16               PF13191.1    185 sp|P42423|YXDL_BACSU -            257     3e-05   24.1   0.0   1   1   7.2e-08   4.3e-05   23.5   0.0    18    72    27    84    19   200 0.80 AAA ATPase domain
AAA_29               PF13555.1     62 sp|P42423|YXDL_BACSU -            257   4.6e-05   22.8   0.1   1   1   1.4e-07   8.5e-05   22.0   0.1    16    47    27    57    18    68 0.76 P-loop containing region of AAA domain
DUF258               PF03193.11   161 sp|P42423|YXDL_BACSU -            257   4.9e-05   22.5   0.1   1   1   1.8e-07   0.00011   21.4   0.1    22    60    19    58     3    88 0.81 Protein of unknown function, DUF258
SMC_N                PF02463.14   220 sp|P42423|YXDL_BACSU -            257   0.00011   21.4   0.3   1   1     7e-06    0.0042   16.3   0.3    18   203    26   208    12   220 0.61 RecF/RecN/SMC N terminal domain
Arch_ATPase          PF01637.13   234 sp|P42423|YXDL_BACSU -            257   0.00017   21.3   0.0   1   2   2.8e-06    0.0017   18.1   0.0     7    68    22    82    20   200 0.81 Archaeal ATPase
AAA_10               PF12846.2    304 sp|P42423|YXDL_BACSU -            257   0.00022   20.7   0.0   1   2   7.5e-05     0.044   13.2   0.0     4    21    36    53    33    67 0.86 AAA-like domain
AAA_23               PF13476.1    202 sp|P42423|YXDL_BACSU -            257   0.00079   19.8   0.2   1   1     3e-06    0.0018   18.6   0.2     9    39    19    53    13    56 0.83 AAA domain
AAA_22               PF13401.1    131 sp|P42423|YXDL_BACSU -            257    0.0008   19.5   0.0   1   2   3.3e-05      0.02   15.0   0.0     3    22    32    51    30    87 0.91 AAA domain
T2SE                 PF00437.15   272 sp|P42423|YXDL_BACSU -            257     0.004   16.1   0.1   1   1   1.5e-05    0.0089   14.9   0.0   110   151    15    56     3    80 0.80 Type II/IV secretion system protein
SbcCD_C              PF13558.1     90 sp|P42423|YXDL_BACSU -            257    0.0047   16.8   0.0   1   1   2.9e-05     0.017   14.9   0.0    26    89   137   187   122   188 0.83 Putative exonuclease SbcCD, C subunit
AAA_17               PF13207.1    121 sp|P42423|YXDL_BACSU -            257    0.0065   17.2   0.1   1   1   1.8e-05     0.011   16.5   0.1     3    32    37    63    36   232 0.80 AAA domain
AAA_25               PF13481.1    194 sp|P42423|YXDL_BACSU -            257    0.0076   15.6   0.0   1   1   6.9e-05     0.041   13.2   0.0    31    50    31    50    26    80 0.91 AAA domain
AAA_19               PF13245.1     76 sp|P42423|YXDL_BACSU -            257     0.011   15.5   0.0   1   1   4.4e-05     0.026   14.2   0.0    12    33    35    55    23    78 0.84 Part of AAA domain
cobW                 PF02492.14   178 sp|P42423|YXDL_BACSU -            257     0.017   14.5   0.0   1   1   5.6e-05     0.033   13.6   0.0     3    21    36    54    34    69 0.82 CobW/HypB/UreG, nucleotide-binding domain
AAA_18               PF13238.1    129 sp|P42423|YXDL_BACSU -            257     0.026   14.8   0.0   1   1   0.00015      0.09   13.0   0.0     3    23    38    62    37   106 0.80 AAA domain
AAA_30               PF13604.1    196 sp|P42423|YXDL_BACSU -            257     0.036   13.6   0.0   1   1   0.00026      0.15   11.6   0.0    16    41    31    56    20    80 0.83 AAA domain
MMR_HSR1             PF01926.18   116 sp|P42423|YXDL_BACSU -            257     0.055   13.4   0.1   1   1   0.00023      0.14   12.1   0.1     3    37    37    71    35   236 0.75 50S ribosome-binding GTPase
NACHT                PF05729.7    166 sp|P42423|YXDL_BACSU -            257     0.086   12.4   0.0   1   1   0.00028      0.17   11.5   0.0     4    20    37    53    34    60 0.85 NACHT domain
AAA_33               PF13671.1    143 sp|P42423|YXDL_BACSU -            257     0.088   12.6   0.0   1   1   0.00055      0.33   10.8   0.0     3    17    37    51    35    88 0.92 AAA domain
AAA_11               PF13086.1    236 sp|P42423|YXDL_BACSU -            257      0.11   12.0   0.0   1   1   0.00036      0.21   11.1   0.0     7    44    23    67    17   169 0.72 AAA domain
MobB                 PF03205.9    140 sp|P42423|YXDL_BACSU -            257      0.14   11.8   0.1   1   1    0.0005       0.3   10.7   0.1     4    20    37    53    35    57 0.88 Molybdopterin guanine dinucleotide synthesis protein B
FtsX                 PF02687.16   121 sp|P42424|YXDM_BACSU -            622   2.4e-14   53.1  26.9   2   4   6.1e-18     9e-14   51.2  12.7     4   117    61   175    58   179 0.94 FtsX-like permease family
FtsX                 PF02687.16   121 sp|P42424|YXDM_BACSU -            622   2.4e-14   53.1  26.9   4   4   4.1e-07    0.0061   16.3   6.2     2    97   511   598   506   621 0.75 FtsX-like permease family
Peripla_BP_2         PF01497.13   238 sp|P54941|YXEB_BACSU -            321   4.2e-29  101.3   1.1   1   1   3.7e-33   5.4e-29  100.9   1.1    18   236    72   290    62   292 0.87 Periplasmic binding protein
Hydrolase_3          PF08282.7    254 sp|P54947|YXEH_BACSU -            270   1.5e-68  231.1   0.0   1   1   9.2e-72   1.7e-68  230.9   0.0     1   254     5   263     5   263 0.94 haloacid dehalogenase-like hydrolase
S6PP                 PF05116.8    247 sp|P54947|YXEH_BACSU -            270   8.4e-19   67.8   0.0   1   2   1.4e-09   2.6e-06   26.9   0.0     3    76     3    77     1    87 0.89 Sucrose-6F-phosphate phosphohydrolase
S6PP                 PF05116.8    247 sp|P54947|YXEH_BACSU -            270   8.4e-19   67.8   0.0   2   2   2.9e-13   5.4e-10   38.9   0.0   120   230   153   260   150   266 0.85 Sucrose-6F-phosphate phosphohydrolase
Hydrolase            PF00702.21   215 sp|P54947|YXEH_BACSU -            270   4.5e-09   37.0   0.3   2   3   2.7e-05     0.049   14.0   0.0   126   164    18    56    15    86 0.80 haloacid dehalogenase-like hydrolase
Hydrolase            PF00702.21   215 sp|P54947|YXEH_BACSU -            270   4.5e-09   37.0   0.3   3   3   3.8e-05      0.07   13.5   0.0   183   215   199   231   163   231 0.83 haloacid dehalogenase-like hydrolase
HAD                  PF12710.2    192 sp|P54947|YXEH_BACSU -            270   2.6e-06   27.7   0.0   2   2   7.2e-08   0.00013   22.1   0.0    88   191    22   227    16   228 0.85 haloacid dehalogenase-like hydrolase
HAD_2                PF13419.1    176 sp|P54947|YXEH_BACSU -            270   6.5e-05   23.2   0.0   1   2   3.4e-05     0.064   13.4   0.0    75   117    17    59     5    71 0.85 Haloacid dehalogenase-like hydrolase
Hydrolase_6          PF13344.1    101 sp|P54947|YXEH_BACSU -            270   8.1e-05   22.4   0.0   1   1   1.5e-07   0.00029   20.6   0.0     1    40     5    45     5    67 0.83 Haloacid dehalogenase-like hydrolase
CBAH                 PF02275.13   316 sp|P54948|YXEI_BACSU -            328  2.1e-135  451.2   0.0   1   1  1.6e-139  2.3e-135  451.0   0.0     1   315     2   315     2   316 1.00 Linear amide C-N hydrolases, choloylglycine hydrolase family
Bac_luciferase       PF00296.15   307 sp|P54950|YXEK_BACSU -            441   2.2e-73  247.1   0.1   1   1     2e-77     3e-73  246.6   0.1     4   303    19   383    17   385 0.88 Luciferase-like monooxygenase
Acetyltransf_1       PF00583.19    83 sp|P54951|YXEL_BACSU -            165   2.5e-14   53.0   0.0   1   1   1.7e-17   4.2e-14   52.3   0.0     2    82    57   140    56   141 0.94 Acetyltransferase (GNAT) family
Acetyltransf_7       PF13508.1     79 sp|P54951|YXEL_BACSU -            165   1.3e-10   41.2   0.0   1   1   7.6e-14   1.9e-10   40.7   0.0     5    78    53   141    49   142 0.78 Acetyltransferase (GNAT) domain
Acetyltransf_9       PF13527.1    127 sp|P54951|YXEL_BACSU -            165   0.00014   21.6   0.0   1   1   9.1e-08   0.00022   21.0   0.0     1   124     4   140     4   142 0.78 Acetyltransferase (GNAT) domain
Acetyltransf_4       PF13420.1    155 sp|P54951|YXEL_BACSU -            165   0.00027   20.9   0.0   1   1   1.4e-07   0.00035   20.5   0.0     2   139     6   145     6   159 0.72 Acetyltransferase (GNAT) domain
Acetyltransf_10      PF13673.1    117 sp|P54951|YXEL_BACSU -            165   0.00081   19.4   0.0   1   1     4e-07   0.00099   19.2   0.0    34   116    44   139    12   140 0.64 Acetyltransferase (GNAT) domain
DUF822               PF05687.8    151 sp|P54951|YXEL_BACSU -            165      0.16   12.2   0.0   1   1   9.2e-05      0.23   11.8   0.0    28    67    22    61    18    73 0.85 Plant protein of unknown function (DUF822)
SBP_bac_3            PF00497.15   225 sp|P54952|YXEM_BACSU -            264   1.1e-62  211.2   3.5   1   1   4.1e-66   1.2e-62  211.0   3.5     1   224    35   255    35   256 0.96 Bacterial extracellular solute-binding proteins, family 3
NMT1                 PF09084.6    216 sp|P54952|YXEM_BACSU -            264   4.9e-05   23.0   0.8   1   1   3.6e-08   0.00011   21.9   0.7    75   164   120   205    86   208 0.84 NMT1/THI5 like
Phosphonate-bd       PF12974.2    243 sp|P54952|YXEM_BACSU -            264   0.00017   21.0   1.1   1   1   3.6e-07    0.0011   18.4   1.1    85   225   118   248    59   261 0.69 ABC transporter, phosphonate, periplasmic substrate-binding protein
LPAM_1               PF08139.7     25 sp|P54952|YXEM_BACSU -            264      0.29   11.4   2.6   1   1   0.00019      0.57   10.4   2.6     6    23     2    21     1    21 0.92 Prokaryotic membrane lipoprotein lipid attachment site
LPAM_2               PF13627.1     24 sp|P54952|YXEM_BACSU -            264      0.39   10.4   3.3   1   1   0.00022      0.65    9.7   3.3     2    16     8    22     7    23 0.87 Prokaryotic lipoprotein-attachment site
BPD_transp_1         PF00528.17   185 sp|P54953|YXEN_BACSU -            224   2.3e-25   89.1   9.3   2   2   1.6e-29   2.3e-25   89.1   9.3     2   184    35   219    34   220 0.93 Binding-protein-dependent transport system inner membrane component
ABC_tran             PF00005.22   137 sp|P54954|YXEO_BACSU -            249   8.9e-34  116.7   0.1   1   1   2.8e-36   1.3e-33  116.2   0.1     1   137    17   168    17   168 0.90 ABC transporter
AAA_21               PF13304.1    303 sp|P54954|YXEO_BACSU -            249   1.5e-15   57.9   0.1   1   2   7.5e-08   3.5e-05   23.9   0.1     2    25    30    55    29    98 0.72 AAA domain
AAA_21               PF13304.1    303 sp|P54954|YXEO_BACSU -            249   1.5e-15   57.9   0.1   2   2   1.6e-10   7.3e-08   32.7   0.0   180   298   100   198    62   202 0.68 AAA domain
SMC_N                PF02463.14   220 sp|P54954|YXEO_BACSU -            249   5.5e-09   35.5   0.9   1   1   1.7e-10   7.7e-08   31.8   0.9    25   208    28   209     7   218 0.66 RecF/RecN/SMC N terminal domain
AAA_15               PF13175.1    415 sp|P54954|YXEO_BACSU -            249   2.5e-07   30.1   0.4   1   2   5.3e-06    0.0025   16.9   0.1     4    66     2    86     1   134 0.71 AAA ATPase domain
AAA_15               PF13175.1    415 sp|P54954|YXEO_BACSU -            249   2.5e-07   30.1   0.4   2   2    0.0002     0.091   11.7   0.0   373   411   161   198   149   202 0.86 AAA ATPase domain
AAA_16               PF13191.1    185 sp|P54954|YXEO_BACSU -            249   3.5e-06   27.1   0.1   1   1   1.5e-08   6.7e-06   26.2   0.1    23   160    26   200    14   212 0.64 AAA ATPase domain
AAA_13               PF13166.1    712 sp|P54954|YXEO_BACSU -            249   5.1e-06   25.2   0.0   2   2   1.8e-06   0.00082   17.9   0.0   529   580   159   208   151   232 0.92 AAA domain
AAA_29               PF13555.1     62 sp|P54954|YXEO_BACSU -            249     1e-05   24.9   0.0   1   1   4.6e-08   2.1e-05   23.9   0.0    14    44    19    48    16    59 0.78 P-loop containing region of AAA domain
AAA_22               PF13401.1    131 sp|P54954|YXEO_BACSU -            249   1.2e-05   25.4   0.2   1   1   1.6e-07   7.6e-05   22.8   0.2     4   114    27   188    23   203 0.56 AAA domain
AAA_23               PF13476.1    202 sp|P54954|YXEO_BACSU -            249   3.7e-05   24.1   0.1   1   1   2.9e-07   0.00013   22.3   0.0     2    41     2    49     2    50 0.73 AAA domain
ABC_ATPase           PF09818.4    448 sp|P54954|YXEO_BACSU -            249   4.9e-05   22.1   1.0   1   2   0.00052      0.24    9.9   0.0   240   265    22    48    18    50 0.91 Predicted ATPase of the ABC class
ABC_ATPase           PF09818.4    448 sp|P54954|YXEO_BACSU -            249   4.9e-05   22.1   1.0   2   2    0.0019      0.86    8.1   0.3   324   413   141   214   134   244 0.76 Predicted ATPase of the ABC class
AAA_17               PF13207.1    121 sp|P54954|YXEO_BACSU -            249   0.00039   21.2   0.5   1   1   1.6e-06   0.00075   20.3   0.5     1    19    29    47    29   241 0.89 AAA domain
AAA_10               PF12846.2    304 sp|P54954|YXEO_BACSU -            249   0.00082   18.8   0.1   1   1   5.6e-06    0.0026   17.2   0.1     4    25    30    52    28   226 0.87 AAA-like domain
DUF258               PF03193.11   161 sp|P54954|YXEO_BACSU -            249    0.0011   18.1   0.0   1   1   3.6e-06    0.0017   17.5   0.0    33    57    24    49     4   105 0.76 Protein of unknown function, DUF258
AAA_33               PF13671.1    143 sp|P54954|YXEO_BACSU -            249    0.0016   18.3   0.1   1   1   7.6e-06    0.0035   17.2   0.1     1    39    29    71    29   171 0.71 AAA domain
Arch_ATPase          PF01637.13   234 sp|P54954|YXEO_BACSU -            249    0.0023   17.6   0.5   1   2   4.4e-05      0.02   14.5   0.0    19   110    26   105    17   132 0.68 Archaeal ATPase
AAA_18               PF13238.1    129 sp|P54954|YXEO_BACSU -            249    0.0025   18.1   0.1   1   1   1.7e-05     0.008   16.4   0.0     1    61    30    88    30   134 0.60 AAA domain
AAA_14               PF13173.1    128 sp|P54954|YXEO_BACSU -            249    0.0034   17.2   0.1   1   1   0.00012     0.054   13.3   0.1     2    28    27    53    26   209 0.78 AAA domain
MobB                 PF03205.9    140 sp|P54954|YXEO_BACSU -            249    0.0035   17.0   0.2   1   1     3e-05     0.014   15.0   0.0     2    20    29    47    28    57 0.88 Molybdopterin guanine dinucleotide synthesis protein B
AAA_25               PF13481.1    194 sp|P54954|YXEO_BACSU -            249    0.0089   15.4   0.0   1   1   8.1e-05     0.037   13.4   0.0    31    50    25    44     6    49 0.90 AAA domain
MMR_HSR1             PF01926.18   116 sp|P54954|YXEO_BACSU -            249    0.0098   15.8   0.2   1   1   4.2e-05      0.02   14.8   0.2     2    33    30    71    29   239 0.82 50S ribosome-binding GTPase
Plant_NMP1           PF06694.6    325 sp|P54954|YXEO_BACSU -            249     0.012   14.6   0.1   1   1   3.2e-05     0.015   14.2   0.1    68   165   115   211    86   220 0.79 Plant nuclear matrix protein 1 (NMP1)
AAA_19               PF13245.1     76 sp|P54954|YXEO_BACSU -            249     0.014   15.1   0.2   1   1   0.00017     0.078   12.7   0.1    10    62    27    82    20   112 0.72 Part of AAA domain
NACHT                PF05729.7    166 sp|P54954|YXEO_BACSU -            249     0.019   14.6   0.3   1   1   0.00011      0.05   13.2   0.0     2    20    29    47    28    55 0.89 NACHT domain
Miro                 PF08477.8    119 sp|P54954|YXEO_BACSU -            249     0.021   15.3   0.0   1   1   9.9e-05     0.046   14.2   0.0     2    46    30    99    29   130 0.66 Miro-like protein
AAA_28               PF13521.1    163 sp|P54954|YXEO_BACSU -            249     0.029   14.3   0.0   1   1   0.00011      0.05   13.5   0.0     2    22    30    50    29   115 0.73 AAA domain
IstB_IS21            PF01695.12   178 sp|P54954|YXEO_BACSU -            249     0.032   13.6   0.0   1   2    0.0017      0.79    9.1   0.0    44    63    24    43     8    49 0.87 IstB-like ATP binding protein
AAA_30               PF13604.1    196 sp|P54954|YXEO_BACSU -            249     0.064   12.8   0.2   1   1   0.00023      0.11   12.1   0.0    17    44    26    53    21   152 0.77 AAA domain
FtsK_SpoIIIE         PF01580.13   205 sp|P54954|YXEO_BACSU -            249     0.077   12.4   0.1   1   1   0.00088      0.41   10.1   0.0    39    58    28    47     7    50 0.83 FtsK/SpoIIIE family
G-alpha              PF00503.15   389 sp|P54954|YXEO_BACSU -            249     0.098   11.3   0.0   1   1   0.00021     0.097   11.3   0.0    61   116    30   104    20   241 0.72 G-protein alpha subunit
SbcCD_C              PF13558.1     90 sp|P54954|YXEO_BACSU -            249      0.11   12.3   0.0   1   1    0.0016      0.76    9.7   0.0    62    89   156   183   118   184 0.80 Putative exonuclease SbcCD, C subunit
Peptidase_M20        PF01546.23   189 sp|P54955|YXEP_BACSU -            380   1.6e-33  115.8   0.2   1   1   5.8e-37   2.2e-33  115.3   0.2     1   187    69   372    69   373 0.94 Peptidase family M20/M25/M40
M20_dimer            PF07687.9    112 sp|P54955|YXEP_BACSU -            380   5.6e-12   45.3   0.2   1   1   4.2e-15   1.5e-11   43.9   0.1     8   108   181   276   178   280 0.93 Peptidase dimerisation domain
MmgE_PrpD            PF03972.9    445 sp|P54956|YXEQ_BACSU -            445  1.1e-124  416.0   0.2   1   1  8.1e-129  1.2e-124  415.9   0.2     2   444     2   442     1   443 0.97 MmgE/PrpD family
EutH                 PF04346.7    354 sp|P54957|YXER_BACSU -            370  2.9e-144  480.4  30.3   1   1  2.2e-148  3.3e-144  480.2  30.3     1   354     1   354     1   354 1.00 Ethanolamine utilisation protein, EutH
Usp                  PF00582.21   140 sp|P42297|YXIE_BACSU -            148   6.6e-36  123.5   1.2   1   1     1e-39   7.6e-36  123.3   1.2     1   140     1   148     1   148 0.99 Universal stress protein family
ETF                  PF01012.16   164 sp|P42297|YXIE_BACSU -            148      0.26   11.0   4.5   1   2   5.5e-05      0.41   10.3   0.4    15    48    13    45     7    57 0.86 Electron transfer flavoprotein domain
Lipase_GDSL_2        PF13472.1    179 sp|P42304|YXIM_BACSU -            382   6.8e-13   49.1   0.0   1   1   1.5e-16   1.1e-12   48.4   0.0     4   178   184   365   182   366 0.79 GDSL-like Lipase/Acylhydrolase family
Lipase_GDSL          PF00657.17   234 sp|P42304|YXIM_BACSU -            382   3.7e-09   36.7   0.0   1   1   8.1e-13     6e-09   36.0   0.0     5   232   184   368   180   370 0.83 GDSL-like Lipase/Acylhydrolase
ATG22                PF11700.3    477 sp|P42306|YXIO_BACSU -            428   8.8e-71  238.7  44.3   1   1   5.1e-74   1.9e-70  237.7  44.3     7   472    10   416     6   420 0.95 Vacuole effluxer Atg22 like
MFS_1                PF07690.11   352 sp|P42306|YXIO_BACSU -            428   1.6e-18   66.5  47.4   1   2   4.2e-09   1.5e-05   23.8  11.7   221   349    23   157     4   159 0.69 Major Facilitator Superfamily
MFS_1                PF07690.11   352 sp|P42306|YXIO_BACSU -            428   1.6e-18   66.5  47.4   2   2   4.1e-18   1.5e-14   53.4  20.1     2   179   242   418   238   426 0.88 Major Facilitator Superfamily
MFS_2                PF13347.1    428 sp|P42306|YXIO_BACSU -            428   2.6e-06   26.1  45.0   1   2   9.2e-10   3.4e-06   25.7  35.8     6   326    12   337     8   353 0.78 MFS/sugar transport protein
DUF347               PF03988.7     55 sp|P42306|YXIO_BACSU -            428      0.14   12.1   0.3   2   4   3.7e-05      0.14   12.1   0.3    24    47   148   171   142   174 0.87 Repeat of Unknown Function (DUF347)
Methyltransf_11      PF08241.7     95 sp|P42313|YXJB_BACSU -            282   2.9e-10   40.4   0.1   1   1   9.8e-13   1.8e-09   37.9   0.0     1    93    97   184    97   186 0.88 Methyltransferase domain
Methyltransf_31      PF13847.1    152 sp|P42313|YXJB_BACSU -            282   1.7e-07   30.9   0.0   1   1   1.3e-10   2.5e-07   30.4   0.0     5   112    94   190    91   247 0.81 Methyltransferase domain
Methyltransf_25      PF13649.1    101 sp|P42313|YXJB_BACSU -            282   3.7e-07   30.4   0.0   1   1   4.2e-10   7.8e-07   29.3   0.0     1    76    96   167    96   182 0.83 Methyltransferase domain
Methyltransf_18      PF12847.2    112 sp|P42313|YXJB_BACSU -            282   0.00015   22.2   0.1   1   1   1.6e-07    0.0003   21.3   0.1     4   108    95   185    92   189 0.86 Methyltransferase domain
Methyltransf_23      PF13489.1    161 sp|P42313|YXJB_BACSU -            282   0.00039   20.1   0.0   1   1   5.6e-07     0.001   18.7   0.0    12   121    79   204    55   248 0.65 Methyltransferase domain
MetW                 PF07021.7    193 sp|P42313|YXJB_BACSU -            282   0.00058   19.2   0.0   1   1   4.7e-07   0.00088   18.7   0.0    15    80    94   163    77   177 0.84 Methionine biosynthesis protein MetW
Methyltransf_26      PF13659.1    117 sp|P42313|YXJB_BACSU -            282   0.00068   19.6   0.1   1   1   1.3e-06    0.0025   17.8   0.1     2    76    94   164    93   225 0.87 Methyltransferase domain
Methyltransf_12      PF08242.7     99 sp|P42313|YXJB_BACSU -            282     0.023   15.1   0.0   1   1   2.8e-05     0.052   14.0   0.0     1    88    97   180    97   186 0.76 Methyltransferase domain
CitMHS               PF03600.11   351 sp|P42314|YXJC_BACSU -            472   1.1e-79  267.6  21.5   1   1     2e-83   1.5e-79  267.1  21.5     1   351     4   418     4   418 0.98 Citrate transporter
GntP_permease        PF02447.11   441 sp|P42314|YXJC_BACSU -            472    0.0086   14.6  26.3   1   1   2.7e-06      0.02   13.3  26.3    62   383    63   410     1   469 0.63 GntP family permease
adh_short            PF00106.20   167 sp|P42317|YXJF_BACSU -            257   9.1e-39  133.0   0.3   1   1   1.1e-41   1.2e-38  132.6   0.3     2   166     5   170     4   171 0.96 short chain dehydrogenase
adh_short_C2         PF13561.1    241 sp|P42317|YXJF_BACSU -            257   7.5e-28   97.9   0.0   1   1   9.2e-31   9.7e-28   97.5   0.0     1   241    10   255    10   255 0.89 Enoyl-(Acyl carrier protein) reductase
KR                   PF08659.5    181 sp|P42317|YXJF_BACSU -            257   3.9e-16   59.2   0.1   1   1   5.5e-19   5.8e-16   58.6   0.1     3   154     6   157     5   179 0.86 KR domain
Epimerase            PF01370.16   236 sp|P42317|YXJF_BACSU -            257   0.00031   20.2   0.0   1   1   4.3e-07   0.00045   19.7   0.0     1    96     6   111     6   154 0.80 NAD dependent epimerase/dehydratase family
3HCDH_N              PF02737.13   180 sp|P42317|YXJF_BACSU -            257   0.00032   20.4   0.2   1   1   5.6e-07   0.00059   19.5   0.2     4    64     8    71     5    89 0.76 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain
Polysacc_synt_2      PF02719.10   294 sp|P42317|YXJF_BACSU -            257   0.00055   18.9   0.1   1   1     7e-07   0.00075   18.4   0.1     2   103     7   106     6   132 0.72 Polysaccharide biosynthesis protein
Methyltransf_25      PF13649.1    101 sp|P42317|YXJF_BACSU -            257    0.0018   18.6   0.0   1   1   2.9e-06    0.0031   17.8   0.0     9    80    13    92     7   109 0.70 Methyltransferase domain
NAD_binding_10       PF13460.1    183 sp|P42317|YXJF_BACSU -            257     0.002   18.1   0.4   1   1   7.7e-06    0.0082   16.1   0.3     2    69     7    89     7   159 0.63 NADH(P)-binding
NAD_binding_2        PF03446.10   163 sp|P42317|YXJF_BACSU -            257    0.0075   16.1   0.3   1   2     5e-05     0.053   13.3   0.0    10    59    13    66     4    77 0.78 NAD binding domain of 6-phosphogluconate dehydrogenase
RmlD_sub_bind        PF04321.12   287 sp|P42317|YXJF_BACSU -            257     0.013   14.3   0.1   1   1     2e-05     0.022   13.6   0.1     4    70     7    99     3   107 0.83 RmlD substrate binding domain
TrkA_N               PF02254.13   116 sp|P42317|YXJF_BACSU -            257     0.016   15.1   0.1   1   1   2.5e-05     0.027   14.4   0.1     5    59    10    66     6    75 0.73 TrkA-N domain
3Beta_HSD            PF01073.14   280 sp|P42317|YXJF_BACSU -            257     0.049   12.3   0.0   1   1   7.1e-05     0.075   11.7   0.0     1    65     7    72     7    99 0.80 3-beta hydroxysteroid dehydrogenase/isomerase family
Methyltransf_31      PF13847.1    152 sp|P42317|YXJF_BACSU -            257     0.063   12.8   0.1   1   1   0.00012      0.12   11.9   0.1    14    76    12    73     8   135 0.70 Methyltransferase domain
Methyltransf_18      PF12847.2    112 sp|P42317|YXJF_BACSU -            257     0.098   13.2   0.1   1   1   0.00022      0.23   12.0   0.1    13    78    13    88     4   121 0.63 Methyltransferase domain
Tub_2                PF04525.7    187 sp|P94352|YXJI_BACSU -            162     4e-32  111.1   0.8   1   1   6.2e-36   4.6e-32  110.9   0.8    16   187     4   148     1   148 0.93 Tubby C 2
DUF161               PF02588.10    82 sp|P94357|YXKD_BACSU -            278   7.5e-27   93.4  34.4   1   2   1.5e-19   1.1e-15   57.6  10.6     2    82     8    89     7    89 0.96 Uncharacterized BCR, YitT family COG1284
DUF161               PF02588.10    82 sp|P94357|YXKD_BACSU -            278   7.5e-27   93.4  34.4   2   2   1.4e-14     1e-10   41.7  15.8     2    81   103   182   102   183 0.95 Uncharacterized BCR, YitT family COG1284
DUF2179              PF10035.4     55 sp|P94357|YXKD_BACSU -            278   3.2e-23   81.0   0.3   1   1   1.5e-26   1.1e-22   79.3   0.3     1    55   216   270   216   270 0.99 Uncharacterized protein conserved in bacteria (DUF2179)
Polysacc_deac_1      PF01522.16   124 sp|P94361|YXKH_BACSU -            279   8.9e-37  125.4   0.1   1   1   2.8e-40   1.4e-36  124.8   0.1     2   123   114   239   113   240 0.97 Polysaccharide deacetylase
Polysacc_deac_3      PF15421.1    425 sp|P94361|YXKH_BACSU -            279     0.017   13.8   0.2   1   1   4.5e-06     0.022   13.4   0.2   127   213   159   247   130   261 0.83 Putative polysaccharide deacetylase
Pilus_CpaD           PF09476.5    203 sp|P94361|YXKH_BACSU -            279      0.11   12.0   0.6   1   2   7.2e-05      0.36   10.2   0.1     2    42    10    50     9    60 0.85 Pilus biogenesis CpaD protein (pilus_cpaD)
Peptidase_M48        PF01435.13   226 sp|P94362|YXKI_BACSU -            562   1.1e-11   44.6   0.1   1   1   2.9e-15   2.2e-11   43.7   0.1    27   183   323   479   298   536 0.69 Peptidase family M48
Peptidase_M56        PF05569.6    299 sp|P94362|YXKI_BACSU -            562    0.0057   15.6   0.3   2   3   7.8e-07    0.0057   15.6   0.3   174   221   362   408   285   410 0.62 BlaR1 peptidase M56
Transp_cyt_pur       PF02133.10   440 sp|P94369|YXLA_BACSU -            457  6.9e-118  393.9  40.7   1   1  5.2e-122  7.8e-118  393.8  40.7     1   440    10   428    10   428 0.99 Permease for cytosine/purines, uracil, thiamine, allantoin
ABC_tran             PF00005.22   137 sp|P94374|YXLF_BACSU -            295   1.8e-31  109.2   0.0   1   1   1.3e-33   8.6e-31  107.0   0.0     1   136    17   155    17   156 0.95 ABC transporter
AAA_21               PF13304.1    303 sp|P94374|YXLF_BACSU -            295   1.4e-13   51.4   0.0   1   2   6.7e-07   0.00043   20.3   0.0     3    46    31    79    29   103 0.71 AAA domain
AAA_21               PF13304.1    303 sp|P94374|YXLF_BACSU -            295   1.4e-13   51.4   0.0   2   2     1e-09   6.5e-07   29.6   0.0   190   297   126   184    78   186 0.83 AAA domain
DUF4162              PF13732.1     84 sp|P94374|YXLF_BACSU -            295   5.2e-09   36.4   0.1   1   1   1.4e-11   8.9e-09   35.7   0.1     1    84   208   293   208   293 0.96 Domain of unknown function (DUF4162)
AAA_23               PF13476.1    202 sp|P94374|YXLF_BACSU -            295   4.6e-05   23.8   0.1   1   1   2.7e-07   0.00017   21.9   0.0     7    45    11    53     7   110 0.84 AAA domain
SMC_N                PF02463.14   220 sp|P94374|YXLF_BACSU -            295   4.7e-05   22.7   0.0   1   2   0.00066      0.42    9.7   0.0    11    49     9    52     3    71 0.69 RecF/RecN/SMC N terminal domain
SMC_N                PF02463.14   220 sp|P94374|YXLF_BACSU -            295   4.7e-05   22.7   0.0   2   2   0.00029      0.19   10.9   0.0   154   205   141   192   105   205 0.79 RecF/RecN/SMC N terminal domain
AAA_29               PF13555.1     62 sp|P94374|YXLF_BACSU -            295   0.00059   19.3   0.0   1   1   1.7e-06    0.0011   18.4   0.0    15    51    20    55    12    60 0.81 P-loop containing region of AAA domain
AAA_22               PF13401.1    131 sp|P94374|YXLF_BACSU -            295    0.0015   18.7   0.1   1   1   1.2e-05    0.0078   16.3   0.1     4   100    27   159    24   189 0.53 AAA domain
AAA_13               PF13166.1    712 sp|P94374|YXLF_BACSU -            295    0.0041   15.6   0.0   2   2   0.00071      0.46    8.8   0.0   525   579   143   194   134   243 0.77 AAA domain
AAA_33               PF13671.1    143 sp|P94374|YXLF_BACSU -            295    0.0065   16.3   0.0   1   1   4.7e-05      0.03   14.1   0.0     2    49    30    82    29   223 0.78 AAA domain
DUF258               PF03193.11   161 sp|P94374|YXLF_BACSU -            295    0.0067   15.6   0.1   1   1   2.2e-05     0.014   14.5   0.1    14    59     5    51     1    65 0.84 Protein of unknown function, DUF258
IstB_IS21            PF01695.12   178 sp|P94374|YXLF_BACSU -            295    0.0075   15.6   0.0   1   2   0.00023      0.15   11.4   0.0    43    61    23    41    10    48 0.83 IstB-like ATP binding protein
SRP54                PF00448.17   196 sp|P94374|YXLF_BACSU -            295    0.0082   15.6   0.7   1   1   3.3e-05     0.021   14.2   0.3     3    26    29    52    27    62 0.84 SRP54-type protein, GTPase domain
AAA_30               PF13604.1    196 sp|P94374|YXLF_BACSU -            295     0.044   13.3   0.0   1   1   0.00014     0.093   12.3   0.0    16    49    25    58    14    66 0.77 AAA domain
NACHT                PF05729.7    166 sp|P94374|YXLF_BACSU -            295      0.05   13.2   0.1   1   1   0.00022      0.14   11.7   0.1     3    24    30    51    28    56 0.88 NACHT domain
AAA_16               PF13191.1    185 sp|P94374|YXLF_BACSU -            295     0.062   13.2   0.0   1   1   0.00033      0.21   11.5   0.0    23    46    26    49    10    86 0.83 AAA ATPase domain
AAA_19               PF13245.1     76 sp|P94374|YXLF_BACSU -            295     0.083   12.6   0.0   1   1   0.00024      0.15   11.7   0.0     9    35    26    51    15    71 0.79 Part of AAA domain
AAA_28               PF13521.1    163 sp|P94374|YXLF_BACSU -            295     0.086   12.8   0.6   1   1   0.00031       0.2   11.5   0.6     2    21    30    49    29    61 0.88 AAA domain
SbcCD_C              PF13558.1     90 sp|P94374|YXLF_BACSU -            295      0.11   12.4   0.1   1   1   0.00071      0.46   10.4   0.1    28    89   123   171   115   172 0.78 Putative exonuclease SbcCD, C subunit
UPF0079              PF02367.12   123 sp|P94374|YXLF_BACSU -            295      0.11   12.1   0.2   1   1   0.00051      0.33   10.5   0.1     8    39    20    51    14    65 0.82 Uncharacterised P-loop hydrolase UPF0079
AAA_17               PF13207.1    121 sp|P94374|YXLF_BACSU -            295      0.13   13.0   0.0   1   1    0.0007      0.45   11.3   0.0     1    21    29    49    29    87 0.89 AAA domain
AAA                  PF00004.24   132 sp|P94374|YXLF_BACSU -            295      0.15   12.2   0.5   1   1   0.00051      0.33   11.1   0.2     2    23    31    52    30   182 0.82 ATPase family associated with various cellular activities (AAA)
MFS_1                PF07690.11   352 sp|P94376|YXLH_BACSU -            400   7.2e-37  126.9  67.4   1   2   1.3e-28   1.9e-24   86.0  28.3     2   239    23   251    22   255 0.89 Major Facilitator Superfamily
MFS_1                PF07690.11   352 sp|P94376|YXLH_BACSU -            400   7.2e-37  126.9  67.4   2   2     5e-18   7.5e-14   51.2  36.1     6   167   228   390   224   397 0.82 Major Facilitator Superfamily
adh_short            PF00106.20   167 sp|O32291|YXNA_BACSU -            356   3.5e-30  105.1   0.8   1   1   4.7e-33     5e-30  104.6   0.8     2   166    33   199    32   200 0.95 short chain dehydrogenase
adh_short_C2         PF13561.1    241 sp|O32291|YXNA_BACSU -            356     4e-13   49.7   0.0   1   1   5.7e-16   6.1e-13   49.1   0.0     5   184    40   219    38   250 0.88 Enoyl-(Acyl carrier protein) reductase
KR                   PF08659.5    181 sp|O32291|YXNA_BACSU -            356   1.7e-12   47.3   0.3   1   1     3e-15   3.2e-12   46.4   0.3     3   164    34   196    33   210 0.84 KR domain
NAD_binding_10       PF13460.1    183 sp|O32291|YXNA_BACSU -            356   9.4e-07   29.0   1.3   1   1   2.6e-09   2.8e-06   27.4   1.3     1   145    34   215    34   255 0.62 NADH(P)-binding
Eno-Rase_NADH_b      PF12242.3     78 sp|O32291|YXNA_BACSU -            356    0.0027   17.4   0.1   1   1   5.5e-06    0.0058   16.3   0.1    15    72     5    63     1    68 0.74 NAD(P)H binding domain of trans-2-enoyl-CoA reductase
Epimerase            PF01370.16   236 sp|O32291|YXNA_BACSU -            356     0.003   17.0   0.6   1   2   1.7e-05     0.018   14.4   0.4     1    93    34   140    34   201 0.79 NAD dependent epimerase/dehydratase family
NmrA                 PF05368.8    233 sp|O32291|YXNA_BACSU -            356    0.0032   16.7   0.4   1   1   6.3e-06    0.0067   15.7   0.4     1    69    34   106    34   120 0.86 NmrA-like family
Methyltransf_18      PF12847.2    112 sp|O32291|YXNA_BACSU -            356      0.02   15.4   0.0   1   1     4e-05     0.043   14.4   0.0    10    73    41   111    36   157 0.74 Methyltransferase domain
2-Hacid_dh_C         PF02826.14   178 sp|O32291|YXNA_BACSU -            356     0.022   13.9   0.2   1   1   3.5e-05     0.038   13.1   0.2    17    93    12    88     2    89 0.73 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain
CoA_binding_2        PF13380.1    116 sp|O32291|YXNA_BACSU -            356     0.024   14.8   0.2   1   2   0.00017      0.19   11.9   0.1    46   103    47   103    15   109 0.76 CoA binding domain
CW_binding_2         PF04122.7     92 sp|O32291|YXNA_BACSU -            356     0.038   14.2   0.6   1   1   7.3e-05     0.078   13.2   0.6    16    78    21    85    11   105 0.79 Putative cell wall binding repeat 2
ADH_zinc_N           PF00107.21   130 sp|O32291|YXNA_BACSU -            356      0.05   13.1   0.1   1   1   8.6e-05     0.091   12.3   0.1     1    30    42    71    42   130 0.88 Zinc-binding dehydrogenase
Polysacc_synt_2      PF02719.10   294 sp|O32291|YXNA_BACSU -            356     0.077   11.8   0.0   1   1   0.00011      0.12   11.2   0.0     1    74    34   100    34   154 0.75 Polysaccharide biosynthesis protein
Shikimate_DH         PF01488.15   135 sp|O32291|YXNA_BACSU -            356     0.091   12.8   0.3   1   1   0.00015      0.16   12.0   0.3     5    62    24    81    21   119 0.85 Shikimate / quinate 5-dehydrogenase
EamA                 PF00892.15   126 sp|Q07835|YXXF_BACSU -            311     4e-38  130.3  36.1   1   2   7.9e-23   3.9e-19   68.9  10.7     2   125    25   146    18   147 0.92 EamA-like transporter family
EamA                 PF00892.15   126 sp|Q07835|YXXF_BACSU -            311     4e-38  130.3  36.1   2   2   2.2e-22   1.1e-18   67.4  17.4     3   125   171   291   161   292 0.90 EamA-like transporter family
EmrE                 PF13536.1    113 sp|Q07835|YXXF_BACSU -            311   9.7e-10   38.6  34.6   1   3   1.3e-07   0.00065   19.8  10.2     3   106    46   147    16   155 0.83 Multidrug resistance efflux transporter
EmrE                 PF13536.1    113 sp|Q07835|YXXF_BACSU -            311   9.7e-10   38.6  34.6   3   3   6.8e-10   3.4e-06   27.2   8.7    26   108   211   294   188   299 0.89 Multidrug resistance efflux transporter
TPT                  PF03151.11   153 sp|Q07835|YXXF_BACSU -            311   0.00023   20.8  10.4   1   2   4.7e-08   0.00023   20.8  10.4    29   150    34   144     9   146 0.86 Triose-phosphate Transporter family
Molybdopterin        PF00384.17   432 sp|P37519|YYAE_BACSU -            667   5.6e-59  199.9   0.0   1   1   1.9e-62   7.2e-59  199.6   0.0     1   432    60   461    60   461 0.85 Molybdopterin oxidoreductase
Molybdop_Fe4S4       PF04879.11    55 sp|P37519|YYAE_BACSU -            667   1.1e-16   60.4   0.8   1   1   5.2e-20   1.9e-16   59.5   0.8     2    52     3    54     2    57 0.93 Molybdopterin oxidoreductase Fe4S4 domain
Molydop_binding      PF01568.16   110 sp|P37519|YYAE_BACSU -            667   2.2e-12   46.7   0.0   1   1   1.5e-15   5.6e-12   45.4   0.0     4    98   560   649   557   659 0.80 Molydopterin dinucleotide binding domain
MFS_1                PF07690.11   352 sp|P37514|YYAJ_BACSU -            451   2.5e-43  148.1  43.3   1   2   4.2e-34     1e-30  106.6  20.0     2   264    37   323    36   323 0.85 Major Facilitator Superfamily
MFS_1                PF07690.11   352 sp|P37514|YYAJ_BACSU -            451   2.5e-43  148.1  43.3   2   2   5.3e-17   1.3e-13   50.3  18.2    36   174   307   445   295   451 0.90 Major Facilitator Superfamily
Sugar_tr             PF00083.19   451 sp|P37514|YYAJ_BACSU -            451   7.1e-33  113.8  26.2   1   1     7e-36   1.7e-32  112.5  25.9    48   441    68   448    59   451 0.86 Sugar (and other) transporter
AA_permease_C        PF13906.1     51 sp|P37514|YYAJ_BACSU -            451      0.03   14.1   4.8   2   2   4.6e-05      0.11   12.3   1.9    20    45   177   202   167   207 0.80 C-terminus of AA_permease
Zip                  PF02535.17   317 sp|P37514|YYAJ_BACSU -            451      0.15   11.0   5.6   2   2   1.3e-05     0.032   13.2   1.4   221   273   294   346   272   358 0.87 ZIP Zinc transporter
DUF1228              PF06779.9     85 sp|P37514|YYAJ_BACSU -            451      0.41   10.6  15.0   2   3    0.0003      0.75    9.8   1.7     8    77   284   355   281   362 0.82 Protein of unknown function (DUF1228)
Lig_chan             PF00060.21   148 sp|P37514|YYAJ_BACSU -            451         1    9.0   7.7   1   3   9.2e-05      0.23   11.1   0.7    48    91   103   146    69   149 0.92 Ligand-gated ion channel
EamA                 PF00892.15   126 sp|P37511|YYAM_BACSU -            305     2e-50  170.0  38.8   1   2   4.3e-28   1.1e-24   86.9  14.9     1   126    15   140    15   140 0.98 EamA-like transporter family
EamA                 PF00892.15   126 sp|P37511|YYAM_BACSU -            305     2e-50  170.0  38.8   2   2   7.1e-29   1.7e-25   89.4  15.9     1   123   164   287   164   290 0.95 EamA-like transporter family
EmrE                 PF13536.1    113 sp|P37511|YYAM_BACSU -            305     2e-13   50.5   8.3   1   2   7.9e-17     2e-13   50.5   8.3     1   105    37   139    37   145 0.94 Multidrug resistance efflux transporter
TPT                  PF03151.11   153 sp|P37511|YYAM_BACSU -            305   3.5e-05   23.4   8.2   1   2   1.4e-08   3.5e-05   23.4   8.2    45   150    43   137     9   138 0.91 Triose-phosphate Transporter family
RseC_MucC            PF04246.7    135 sp|P37511|YYAM_BACSU -            305     0.047   13.2   0.2   4   4   1.9e-05     0.047   13.2   0.2    61   124   239   302   237   305 0.87 Positive regulator of sigma(E), RseC/MucC
NADH-u_ox-rdase      PF10785.4     87 sp|P37511|YYAM_BACSU -            305       5.6    7.2   8.5   1   3   0.00019      0.48   10.7   0.3    16    73    26    84    23    90 0.76 NADH-ubiquinone oxidoreductase complex I, 21 kDa subunit
Lactamase_B          PF00753.22   194 sp|P37502|YYBB_BACSU -            220   3.2e-27   95.4   2.4   1   1   9.1e-31   4.5e-27   94.9   2.4     5   157    24   170    21   200 0.89 Metallo-beta-lactamase superfamily
Lactamase_B_2        PF12706.2    194 sp|P37502|YYBB_BACSU -            220   1.9e-05   24.2   0.3   1   1   4.7e-09   2.3e-05   24.0   0.3     3   116    37   120    35   202 0.68 Beta-lactamase superfamily domain
Lactamase_B_3        PF13483.1    163 sp|P37502|YYBB_BACSU -            220     0.049   13.3   0.0   1   1   1.5e-05     0.073   12.7   0.0     9    81    27   114    23   147 0.71 Beta-lactamase superfamily domain
Acetyltransf_1       PF00583.19    83 sp|P37500|YYBD_BACSU -            147   3.3e-12   46.2   0.5   1   1   2.4e-15   4.4e-12   45.8   0.5     2    83    51   123    50   123 0.88 Acetyltransferase (GNAT) family
Acetyltransf_7       PF13508.1     79 sp|P37500|YYBD_BACSU -            147   2.5e-09   37.1   0.2   1   1   1.8e-12   3.3e-09   36.7   0.2     4    78    46   123    43   124 0.93 Acetyltransferase (GNAT) domain
FR47                 PF08445.5     86 sp|P37500|YYBD_BACSU -            147   1.7e-08   34.0   0.1   1   1   1.3e-11   2.3e-08   33.6   0.1    20    83    67   128    54   131 0.88 FR47-like protein
Acetyltransf_10      PF13673.1    117 sp|P37500|YYBD_BACSU -            147   6.4e-08   32.7   0.0   1   1   4.4e-11   8.1e-08   32.3   0.0    31   117    34   122    11   122 0.84 Acetyltransferase (GNAT) domain
Acetyltransf_9       PF13527.1    127 sp|P37500|YYBD_BACSU -            147   4.8e-05   23.2   0.0   1   1   8.4e-08   0.00016   21.5   0.0     3   127     4   125     2   125 0.91 Acetyltransferase (GNAT) domain
Acetyltransf_5       PF13444.1    101 sp|P37500|YYBD_BACSU -            147   0.00024   21.6   0.1   1   1   4.5e-07   0.00083   19.8   0.0     2    66    19    80    18    87 0.81 Acetyltransferase (GNAT) domain
Autoind_synth        PF00765.12   182 sp|P37500|YYBD_BACSU -            147      0.02   14.1   0.0   1   1   2.2e-05     0.041   13.1   0.0     6    62     8    62     4    69 0.84 Autoinducer synthetase
TFIIA_gamma_N        PF02268.11    49 sp|P37500|YYBD_BACSU -            147      0.15   11.6   0.0   1   1   0.00015      0.28   10.8   0.0     5    29    79   103    76   105 0.92 Transcription initiation factor IIA, gamma subunit, helical domain
MFS_1                PF07690.11   352 sp|P37498|YYBF_BACSU -            404   5.6e-40  137.1  56.8   1   2   1.7e-42     5e-39  134.0  42.9     4   316    17   322    14   329 0.87 Major Facilitator Superfamily
MFS_1                PF07690.11   352 sp|P37498|YYBF_BACSU -            404   5.6e-40  137.1  56.8   2   2    0.0002      0.59    8.7   7.7   107   182   321   397   319   403 0.75 Major Facilitator Superfamily
Sugar_tr             PF00083.19   451 sp|P37498|YYBF_BACSU -            404   1.1e-08   34.0  38.6   1   2   7.6e-12   2.3e-08   33.0  12.8     6   198    15   195    13   209 0.83 Sugar (and other) transporter
MFS_2                PF13347.1    428 sp|P37498|YYBF_BACSU -            404   6.8e-06   24.7  12.5   1   3   6.7e-05       0.2   10.0   5.5   231   332    19   121    11   131 0.71 MFS/sugar transport protein
MFS_2                PF13347.1    428 sp|P37498|YYBF_BACSU -            404   6.8e-06   24.7  12.5   2   3   2.3e-09   6.8e-06   24.7  12.5   150   327   142   315   133   330 0.70 MFS/sugar transport protein
DUF1517              PF07466.6    289 sp|P37498|YYBF_BACSU -            404      0.29   10.0   0.7   1   1    0.0002       0.6    9.0   0.7     6    82   316   385   314   402 0.70 Protein of unknown function (DUF1517)
ABC_tran             PF00005.22   137 sp|P37494|YYBJ_BACSU -            218   3.2e-33  114.9   0.1   1   1   3.9e-36   4.1e-33  114.5   0.1     1   137    17   157    17   157 0.98 ABC transporter
AAA_21               PF13304.1    303 sp|P37494|YYBJ_BACSU -            218   6.9e-13   49.2   6.3   1   2   2.8e-06    0.0029   17.6   0.6     3    22    31    50    29    81 0.75 AAA domain
AAA_21               PF13304.1    303 sp|P37494|YYBJ_BACSU -            218   6.9e-13   49.2   6.3   2   2   1.9e-11     2e-08   34.5   1.1   212   298   104   187    69   193 0.74 AAA domain
SMC_N                PF02463.14   220 sp|P37494|YYBJ_BACSU -            218   8.7e-05   21.8   0.8   1   2   0.00029       0.3   10.2   0.1    20    45    22    48     6    71 0.79 RecF/RecN/SMC N terminal domain
SMC_N                PF02463.14   220 sp|P37494|YYBJ_BACSU -            218   8.7e-05   21.8   0.8   2   2   0.00037      0.39    9.9   0.0   158   200   146   189   133   209 0.76 RecF/RecN/SMC N terminal domain
AAA_29               PF13555.1     62 sp|P37494|YYBJ_BACSU -            218    0.0023   17.4   0.3   1   1   4.8e-06    0.0051   16.3   0.3    19    51    24    55    15    61 0.84 P-loop containing region of AAA domain
AAA_23               PF13476.1    202 sp|P37494|YYBJ_BACSU -            218    0.0081   16.5   5.0   1   1   1.9e-05      0.02   15.2   5.0    14    68    21    85     9   211 0.63 AAA domain
UPF0079              PF02367.12   123 sp|P37494|YYBJ_BACSU -            218     0.045   13.3   0.1   1   1   8.6e-05     0.091   12.3   0.1     8    36    20    48    13    59 0.86 Uncharacterised P-loop hydrolase UPF0079
Mg_chelatase         PF01078.16   207 sp|P37494|YYBJ_BACSU -            218     0.045   12.9   0.1   1   1   7.4e-05     0.078   12.1   0.1    27    51    32    56    29    78 0.86 Magnesium chelatase, subunit ChlI
PIF1                 PF05970.9    364 sp|P37494|YYBJ_BACSU -            218     0.045   12.6   1.6   1   2   0.00012      0.13   11.1   0.2     7    50    14    55     6    61 0.82 PIF1-like helicase
Zeta_toxin           PF06414.7    201 sp|P37494|YYBJ_BACSU -            218     0.062   12.3   0.0   1   1   8.1e-05     0.086   11.9   0.0    18    63    29    91    13   107 0.80 Zeta toxin
AAA_16               PF13191.1    185 sp|P37494|YYBJ_BACSU -            218     0.086   12.8   0.0   1   1    0.0001      0.11   12.5   0.0    29   125    32   124    21   182 0.67 AAA ATPase domain
AAA                  PF00004.24   132 sp|P37494|YYBJ_BACSU -            218     0.098   12.8   1.4   1   1   0.00061      0.65   10.1   1.4     3    38    32   125    30   195 0.58 ATPase family associated with various cellular activities (AAA)
NACHT                PF05729.7    166 sp|P37494|YYBJ_BACSU -            218      0.11   12.1   0.1   1   1   0.00024      0.25   10.9   0.1     6    21    33    48    13    53 0.92 NACHT domain
MFS_1                PF07690.11   352 sp|P37489|YYBO_BACSU -            435   4.9e-57  193.2  36.7   1   2   1.3e-60   4.9e-57  193.2  36.7     4   350    30   390    27   391 0.85 Major Facilitator Superfamily
MFS_1                PF07690.11   352 sp|P37489|YYBO_BACSU -            435   4.9e-57  193.2  36.7   2   2   4.4e-06     0.016   13.9  22.6    62   173   316   427   316   434 0.78 Major Facilitator Superfamily
DUF4381              PF14316.1    146 sp|P37489|YYBO_BACSU -            435      0.14   12.2   0.0   1   1   0.00011       0.4   10.7   0.0    20    80   172   236   157   241 0.85 Domain of unknown function (DUF4381)
OATP                 PF03137.15   539 sp|P37489|YYBO_BACSU -            435      0.66    7.9  16.6   2   3   2.5e-06    0.0092   14.0   3.6   228   393   175   328   174   357 0.82 Organic Anion Transporter Polypeptide (OATP) family
PMT_2                PF13231.1    159 sp|P37483|YYCA_BACSU -            685     4e-31  108.0  20.8   2   2   5.4e-35     4e-31  108.0  20.8     1   159    63   221    63   221 0.95 Dolichyl-phosphate-mannose-protein mannosyltransferase
PMT                  PF02366.13   245 sp|P37483|YYCA_BACSU -            685   2.1e-13   50.2  19.7   1   1   2.8e-17   2.1e-13   50.2  19.7    25   235    25   224     3   230 0.80 Dolichyl-phosphate-mannose-protein mannosyltransferase
MFS_1                PF07690.11   352 sp|P37482|YYCB_BACSU -            402   5.4e-36  124.0  74.0   1   2   1.2e-31   8.6e-28   97.0  40.8     9   347    20   344    12   344 0.85 Major Facilitator Superfamily
MFS_1                PF07690.11   352 sp|P37482|YYCB_BACSU -            402   5.4e-36  124.0  74.0   2   2   1.5e-14   1.1e-10   40.8  25.2     7   166   220   381   211   390 0.84 Major Facilitator Superfamily
UNC-93               PF05978.11   157 sp|P37482|YYCB_BACSU -            402    0.0035   16.8   0.8   1   3   4.7e-07    0.0035   16.8   0.8     7   138    18   144    14   156 0.82 Ion channel regulatory protein UNC-93
Lactamase_B          PF00753.22   194 sp|C0SP91|YYCJ_BACSU -            264   8.8e-24   84.2   0.3   1   1   2.2e-27   1.1e-23   83.9   0.3     3   194    11   218     9   218 0.95 Metallo-beta-lactamase superfamily
Lactamase_B_2        PF12706.2    194 sp|C0SP91|YYCJ_BACSU -            264     1e-15   57.8   0.1   1   1   2.6e-19   1.3e-15   57.5   0.1     2   178    25   200    24   219 0.69 Beta-lactamase superfamily domain
Lactamase_B_3        PF13483.1    163 sp|C0SP91|YYCJ_BACSU -            264   0.00029   20.5   0.0   1   1   1.8e-07   0.00091   18.9   0.0     8   114    15   146    12   247 0.79 Beta-lactamase superfamily domain
Acetyltransf_1       PF00583.19    83 sp|O32293|YYCN_BACSU -            156   1.5e-15   56.9   0.1   1   1     1e-18   2.1e-15   56.4   0.1     6    83    71   146    54   146 0.91 Acetyltransferase (GNAT) family
Acetyltransf_3       PF13302.1    142 sp|O32293|YYCN_BACSU -            156   1.3e-10   41.6   0.0   1   1     7e-14   1.5e-10   41.4   0.0     3   142     4   146     2   146 0.72 Acetyltransferase (GNAT) domain
Acetyltransf_10      PF13673.1    117 sp|O32293|YYCN_BACSU -            156   1.1e-09   38.4   0.1   1   1   7.2e-13   1.5e-09   37.9   0.1    40   117    56   145    15   145 0.77 Acetyltransferase (GNAT) domain
Acetyltransf_7       PF13508.1     79 sp|O32293|YYCN_BACSU -            156   2.6e-09   37.1   0.0   1   1   1.8e-12   3.9e-09   36.5   0.0     3    79    60   147    58   147 0.76 Acetyltransferase (GNAT) domain
FR47                 PF08445.5     86 sp|O32293|YYCN_BACSU -            156   1.5e-06   27.8   0.0   1   1   1.2e-09   2.5e-06   27.1   0.0    18    81    84   149    77   152 0.86 FR47-like protein
Acetyltransf_4       PF13420.1    155 sp|O32293|YYCN_BACSU -            156   2.3e-06   27.6   0.0   1   1   1.3e-09   2.8e-06   27.3   0.0    21   136    30   147    14   151 0.86 Acetyltransferase (GNAT) domain
Acetyltransf_8       PF13523.1    152 sp|O32293|YYCN_BACSU -            156    0.0034   17.2   0.0   1   1   2.4e-06     0.005   16.7   0.0    36   141    49   150    21   154 0.75 Acetyltransferase (GNAT) domain
ADH_N                PF08240.7    109 sp|Q45604|YYCR_BACSU -            408   3.7e-24   84.5   1.8   1   1   4.9e-27   7.3e-24   83.6   1.8     2   103    49   158    48   164 0.91 Alcohol dehydrogenase GroES-like domain
ADH_zinc_N           PF00107.21   130 sp|Q45604|YYCR_BACSU -            408   8.4e-12   44.7   0.7   1   2   5.9e-14   8.7e-11   41.4   0.1     1    69   211   280   211   282 0.97 Zinc-binding dehydrogenase
AlaDh_PNT_C          PF01262.16   168 sp|Q45604|YYCR_BACSU -            408   0.00011   21.8   0.5   1   1   1.7e-07   0.00024   20.6   0.2    21    74   202   256   189   275 0.86 Alanine dehydrogenase/PNT, C-terminal domain
ADH_N_assoc          PF13823.1     23 sp|Q45604|YYCR_BACSU -            408    0.0034   17.0   0.3   1   1   5.8e-06    0.0087   15.7   0.3     2    16    10    24    10    29 0.96 Alcohol dehydrogenase GroES-associated
FAD_binding_3        PF01494.14   356 sp|Q45604|YYCR_BACSU -            408    0.0052   15.8   0.2   1   1   4.6e-06    0.0068   15.5   0.2     3    63   203   262   201   304 0.89 FAD binding domain
PALP                 PF00291.20   306 sp|Q45604|YYCR_BACSU -            408    0.0056   15.9   0.1   1   1   7.9e-06     0.012   14.8   0.1    55   110   200   253   175   280 0.81 Pyridoxal-phosphate dependent enzyme
FAD_binding_2        PF00890.19   417 sp|Q45604|YYCR_BACSU -            408    0.0073   15.1   0.2   1   1   7.3e-06     0.011   14.6   0.2     3    47   205   249   203   265 0.85 FAD binding domain
Pyr_redox_3          PF13738.1    203 sp|Q45604|YYCR_BACSU -            408     0.017   15.2   0.2   1   1   1.9e-05     0.028   14.4   0.2     2    46   206   257   205   318 0.76 Pyridine nucleotide-disulphide oxidoreductase
FAD_oxidored         PF12831.2    428 sp|Q45604|YYCR_BACSU -            408     0.034   13.2   1.6   1   1   4.1e-05     0.061   12.3   1.6     2    29   204   231   203   235 0.93 FAD dependent oxidoreductase
2-Hacid_dh_C         PF02826.14   178 sp|Q45604|YYCR_BACSU -            408       0.1   11.7   0.1   1   1   0.00017      0.26   10.4   0.1    35    85   200   251   190   256 0.81 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain
Metallophos          PF00149.23   200 sp|Q45600|YYDB_BACSU -            481   1.4e-19   70.2   0.8   1   2   1.9e-23   1.4e-19   70.2   0.8     2   199     4   237     3   238 0.95 Calcineurin-like phosphoesterase
Metallophos_2        PF12850.2    156 sp|Q45600|YYDB_BACSU -            481   8.1e-06   25.7   3.3   1   1   2.2e-09   1.7e-05   24.7   3.3     2   123     4   240     3   289 0.62 Calcineurin-like phosphoesterase superfamily domain
Peptidase_M50        PF02163.17   192 sp|Q45594|YYDH_BACSU -            252   0.00014   20.8  16.2   2   2   2.8e-08   0.00042   19.3  11.0     2   182    95   240    93   249 0.80 Peptidase family M50
ABC_tran             PF00005.22   137 sp|Q45593|YYDI_BACSU -            209   4.2e-13   49.7   1.5   1   1   1.6e-15   2.2e-12   47.4   1.5     1   137    16   142    16   142 0.76 ABC transporter
AAA_21               PF13304.1    303 sp|Q45593|YYDI_BACSU -            209   4.3e-06   26.8   8.0   2   2   3.2e-09   4.3e-06   26.8   8.0   182   283    51   157    43   174 0.74 AAA domain
SMC_N                PF02463.14   220 sp|Q45593|YYDI_BACSU -            209   2.8e-05   23.4   6.8   1   2   4.4e-05      0.06   12.5   0.8    19    49    20    49     7    91 0.69 RecF/RecN/SMC N terminal domain
SMC_N                PF02463.14   220 sp|Q45593|YYDI_BACSU -            209   2.8e-05   23.4   6.8   2   2   1.3e-05     0.017   14.3   0.9   132   200   109   174    73   195 0.74 RecF/RecN/SMC N terminal domain
AAA_22               PF13401.1    131 sp|Q45593|YYDI_BACSU -            209   0.00016   21.7   0.4   1   1   2.1e-07   0.00029   21.0   0.4     6   126    28   174    23   178 0.70 AAA domain
NB-ARC               PF00931.17   287 sp|Q45593|YYDI_BACSU -            209   0.00017   20.5   1.2   1   1   1.7e-07   0.00023   20.0   1.2    22   114    29   144    12   160 0.77 NB-ARC domain
KaiC                 PF06745.8    227 sp|Q45593|YYDI_BACSU -            209    0.0066   15.5   0.3   1   1   1.9e-05     0.026   13.6   0.3    16    49    23    56    19   182 0.91 KaiC
DUF258               PF03193.11   161 sp|Q45593|YYDI_BACSU -            209     0.013   14.6   0.8   1   2     2e-05     0.027   13.6   0.2    16    64     6    55     1    72 0.74 Protein of unknown function, DUF258
AAA_13               PF13166.1    712 sp|Q45593|YYDI_BACSU -            209     0.042   12.3  10.1   1   2    0.0005      0.67    8.3   0.7    15   101    25   114    11   126 0.67 AAA domain
AAA_13               PF13166.1    712 sp|Q45593|YYDI_BACSU -            209     0.042   12.3  10.1   2   2   0.00059       0.8    8.0   3.9   525   578   129   182   112   203 0.80 AAA domain
DUF2413              PF10310.4    444 sp|Q45593|YYDI_BACSU -            209     0.045   12.5   1.2   1   1   4.3e-05     0.058   12.2   1.2   170   222   132   183   113   206 0.87 Protein of unknown function (DUF2413)
Bac_DNA_binding      PF00216.16    90 sp|Q45593|YYDI_BACSU -            209     0.047   13.7   0.0   1   1   9.9e-05      0.13   12.2   0.0    28    63   136   171   130   174 0.94 Bacterial DNA-binding protein
PDZ_2                PF13180.1     82 sp|P39668|YYXA_BACSU -            400   9.6e-21   73.4   0.1   1   1   7.8e-24   2.9e-20   71.9   0.1     1    82   295   392   295   392 0.96 PDZ domain
Trypsin_2            PF13365.1    120 sp|P39668|YYXA_BACSU -            400   1.2e-19   70.4   0.8   1   1   6.6e-23   2.4e-19   69.4   0.8     1   120   110   257   110   257 0.86 Trypsin-like peptidase domain
Trypsin              PF00089.21   220 sp|P39668|YYXA_BACSU -            400     3e-14   53.1   0.2   1   1   2.4e-17   8.7e-14   51.6   0.2    34   214   121   277   105   283 0.79 Trypsin
PDZ                  PF00595.19    81 sp|P39668|YYXA_BACSU -            400    0.0034   17.5   1.5   2   2   2.2e-06    0.0082   16.3   0.0     9    78   294   377   286   379 0.84 PDZ domain (Also known as DHR or GLGF)
ZapA                 PF05164.8     89 sp|P94542|ZAPA_BACSU -             85   3.1e-18   65.5   0.3   1   1   2.5e-22   3.7e-18   65.2   0.3     2    80     9    84     8    84 0.97 Cell division protein ZapA
TroA                 PF01297.12   256 sp|O34966|ZNUA_BACSU -            319     4e-84  281.8   5.4   1   1   6.1e-88   4.5e-84  281.6   5.4     1   256    39   315    39   315 0.96 Periplasmic solute binding protein family
DUF92                PF01940.11   226 sp|O34966|ZNUA_BACSU -            319     0.065   12.3   0.0   1   1   1.4e-05       0.1   11.7   0.0   100   128   250   278   204   286 0.77 Integral membrane protein DUF92
ABC-3                PF00950.12   258 sp|O34610|ZNUB_BACSU -            280   8.8e-82  274.2  35.7   1   1   3.4e-85     1e-81  274.0  35.7     2   257     6   262     5   263 0.99 ABC 3 transport family
FecCD                PF01032.13   311 sp|O34610|ZNUB_BACSU -            280   1.2e-08   34.1  24.5   2   2   4.1e-12   1.2e-08   34.1  24.5   144   277    98   231    63   259 0.79 FecCD transport family
CCSMST1              PF15013.1     77 sp|O34610|ZNUB_BACSU -            280     0.038   13.8   0.1   1   1   4.8e-05      0.14   12.0   0.1    14    52   113   151   106   152 0.75 CCSMST1 family
DUF1129              PF06570.6    206 sp|O34610|ZNUB_BACSU -            280     0.086   12.1   0.2   2   2   2.9e-05     0.086   12.1   0.2    88   143   223   278   212   280 0.83 Protein of unknown function (DUF1129)
ABC_tran             PF00005.22   137 sp|O34946|ZNUC_BACSU -            231   5.2e-32  111.0   0.0   1   1   7.6e-35     8e-32  110.3   0.0     1   136    19   165    19   166 0.87 ABC transporter
AAA_21               PF13304.1    303 sp|O34946|ZNUC_BACSU -            231   1.3e-11   45.0   0.0   1   1     5e-12   5.3e-09   36.4   0.0     2   298    32   197    31   201 0.83 AAA domain
SMC_N                PF02463.14   220 sp|O34946|ZNUC_BACSU -            231   1.3e-05   24.5   0.1   1   1   3.2e-08   3.4e-05   23.1   0.1    24   213    29   213    19   218 0.76 RecF/RecN/SMC N terminal domain
NTPase_1             PF03266.10   168 sp|O34946|ZNUC_BACSU -            231   0.00023   20.9   0.2   1   2   2.3e-05     0.024   14.3   0.1     2    44    32    71    31   125 0.85 NTPase
SbcCD_C              PF13558.1     90 sp|O34946|ZNUC_BACSU -            231   0.00066   19.5   0.1   1   1     1e-05     0.011   15.6   0.1    26    88   131   180   113   182 0.76 Putative exonuclease SbcCD, C subunit
AAA_15               PF13175.1    415 sp|O34946|ZNUC_BACSU -            231    0.0078   15.2   0.1   2   2    0.0002      0.22   10.5   0.0   365   410   154   196   145   198 0.90 AAA ATPase domain
AAA_29               PF13555.1     62 sp|O34946|ZNUC_BACSU -            231     0.014   14.9   0.1   1   1   2.6e-05     0.028   13.9   0.1    15    44    22    50    18    65 0.78 P-loop containing region of AAA domain
ArgK                 PF03308.11   267 sp|O34946|ZNUC_BACSU -            231     0.023   13.4   0.1   1   1   4.5e-05     0.048   12.4   0.1    18    50    18    50    10    62 0.82 ArgK protein
DUF258               PF03193.11   161 sp|O34946|ZNUC_BACSU -            231     0.031   13.4   0.0   1   1   5.6e-05     0.059   12.5   0.0    27    77    20    73     5    81 0.79 Protein of unknown function, DUF258
Pilin                PF00114.14   108 sp|O34946|ZNUC_BACSU -            231     0.032   14.9   0.1   1   1   0.00013      0.14   12.9   0.0    53    95   184   223   142   229 0.85 Pilin (bacterial filament)
MutS_V               PF00488.16   235 sp|O34946|ZNUC_BACSU -            231      0.04   13.3   0.0   1   1   0.00023      0.25   10.7   0.0    30    62    16    48     7    53 0.87 MutS domain V
DUF1477              PF07346.6    118 sp|O34946|ZNUC_BACSU -            231     0.047   13.7   0.0   1   1   7.8e-05     0.082   12.9   0.0    23    76   157   213   137   214 0.77 Protein of unknown function (DUF1477)
AAA_23               PF13476.1    202 sp|O34946|ZNUC_BACSU -            231     0.053   13.8   0.2   1   1   8.9e-05     0.094   13.0   0.2    12    43    21    53    14   123 0.83 AAA domain
E1-E2_ATPase         PF00122.15   230 sp|O31688|ZOSA_BACSU -            637   4.5e-52  176.3  11.4   2   3   5.8e-55   1.2e-51  174.9   0.3     1   229   106   326   106   327 0.96 E1-E2 ATPase
Hydrolase            PF00702.21   215 sp|O31688|ZOSA_BACSU -            637     2e-47  162.3   5.5   1   1   1.6e-50   3.5e-47  161.6   5.5     3   215   333   547   331   547 0.91 haloacid dehalogenase-like hydrolase
HAD                  PF12710.2    192 sp|O31688|ZOSA_BACSU -            637   8.2e-15   55.4   0.0   1   1   9.2e-18     2e-14   54.2   0.0     1   192   334   544   334   544 0.59 haloacid dehalogenase-like hydrolase
Hydrolase_3          PF08282.7    254 sp|O31688|ZOSA_BACSU -            637   2.1e-07   30.8   1.8   2   2   4.1e-09   8.6e-06   25.5   0.6   203   246   528   571   515   576 0.87 haloacid dehalogenase-like hydrolase
UbiA                 PF01040.13   257 sp|O31688|ZOSA_BACSU -            637    0.0066   15.7   0.9   1   2   3.1e-06    0.0066   15.7   0.9   117   236    24   126    20   141 0.76 UbiA prenyltransferase family
CoA_binding_2        PF13380.1    116 sp|O31688|ZOSA_BACSU -            637     0.045   13.9   0.2   1   1   7.4e-05      0.16   12.1   0.2    68   111   470   512   427   513 0.92 CoA binding domain
FUR                  PF01475.14   120 sp|P54479|ZUR_BACSU  -            145   1.5e-28   99.1   0.0   1   1   1.2e-32   1.7e-28   98.9   0.0     1   120    12   129    12   129 0.92 Ferric uptake regulator family
