Fungal Genome Collection
University of Nebraska Lincoln
School of Biological Sciences and Center for Plant Science Innovation
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UniProt_SwissProt BLAST: Single locus
Species:
Saccharomyces cerevisiae S288C
Locus:
YMR049C
Length:
807
Number of sequences:
5887
Description:
YMR049C ERB1 SGDID:S000004652, Chr XIII from 370517-368094, Genome Release 64-1-1, reverse complement, Verified ORF, "Constituent of 66S pre-ribosomal particles, forms a complex with Nop7p and Ytm1p that is required for maturation of the large ribosomal subunit; required for maturation of the 25S and 5.8S ribosomal RNAs; homologous to mammalian Bop1"
rec.SubjectHit LengthDescriptionAlign.LenE valueBit score% ident.  % pos.GO associations
751A3LNW3    302   SEC13_PICST Protein transport protein SEC13 O...795.7     33.9     34     54GO:0005789; C:endoplasmic reticulum membrane; IEA:UniProtKB-SubCell.::GO:0012507; C:ER to Golgi transport vesicle membrane; IEA:UniProtKB-SubCell.::GO:0005643; C:nuclear pore; IEA:UniProtKB-SubCell.
GO:0051028; P:mRNA transport; IEA:UniProtKB-KW.::GO:0015031; P:protein transport; IEA:UniProtKB-KW.::GO:0016192; P:vesicle-mediated transport; IEA:UniProtKB-KW.
752Q6FVD3    840   HIR1_CANGA Protein HIR1 OS=NRRL Y-65) (Yeast)...1045.7     34.3     24     47GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0003682; F:chromatin binding; IEA:InterPro.
GO:0016568; P:chromatin modification; IEA:UniProtKB-KW.::GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
753A8QBF3    327   EIF3I_BRUMA Eukaryotic translation initiation...365.7     33.9     39     58GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0003743; F:translation initiation factor activity; IEA:UniProtKB-KW.
754Q1HPW4    329   EIF3I_BOMMO Eukaryotic translation initiation...405.8     33.9     33     58GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0003743; F:translation initiation factor activity; IEA:UniProtKB-KW.
755Q25189    317   GBLP_HYDVU Guanine nucleotide-binding protein...435.8     33.9     30     56
756A5DHD9    290   SEC13_PICGU Protein transport protein SEC13 O...785.9     33.5     35     49GO:0005789; C:endoplasmic reticulum membrane; IEA:UniProtKB-SubCell.::GO:0012507; C:ER to Golgi transport vesicle membrane; IEA:UniProtKB-SubCell.::GO:0005643; C:nuclear pore; IEA:UniProtKB-SubCell.
GO:0051028; P:mRNA transport; IEA:UniProtKB-KW.::GO:0015031; P:protein transport; IEA:UniProtKB-KW.::GO:0016192; P:vesicle-mediated transport; IEA:UniProtKB-KW.
757A7TMF9    453   YTM1_VANPO Ribosome biogenesis protein YTM1 O...805.9     33.9     28     45GO:0005730; C:nucleolus; IEA:UniProtKB-SubCell.::GO:0005654; C:nucleoplasm; IEA:UniProtKB-SubCell.
GO:0006364; P:rRNA processing; IEA:UniProtKB-KW.
758Q6FJS0    455   PFS2_CANGA Polyadenylation factor subunit 2 O...356     33.9     34     57GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0051301; P:cell division; IEA:UniProtKB-KW.::GO:0007059; P:chromosome segregation; IEA:UniProtKB-KW.::GO:0007067; P:mitosis; IEA:UniProtKB-KW.::GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.
759Q5B563    309   SEC13_EMENI Protein transport protein sec13 O...786     33.9     33     51GO:0005789; C:endoplasmic reticulum membrane; IEA:UniProtKB-SubCell.::GO:0012507; C:ER to Golgi transport vesicle membrane; IEA:UniProtKB-SubCell.::GO:0005643; C:nuclear pore; IEA:UniProtKB-SubCell.
GO:0051028; P:mRNA transport; IEA:UniProtKB-KW.::GO:0015031; P:protein transport; IEA:UniProtKB-KW.::GO:0016192; P:vesicle-mediated transport; IEA:UniProtKB-KW.
760P0CS36    435   HAT2_CRYNJ Histone acetyltransferase type B s...496.1     33.9     35     53GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.::GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0016568; P:chromatin modification; IEA:UniProtKB-KW.::GO:0006281; P:DNA repair; IEA:UniProtKB-KW.
761P0CS37    435   HAT2_CRYNB Histone acetyltransferase type B s...496.1     33.9     35     53GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.::GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0016568; P:chromatin modification; IEA:UniProtKB-KW.::GO:0006281; P:DNA repair; IEA:UniProtKB-KW.
762Q9UTC7    462   YIDC_SCHPO Uncharacterized WD repeat-containi...386.1     33.9     39     63GO:0005829; C:cytosol; IDA:PomBase.::GO:0046540; C:U4/U6 x U5 tri-snRNP complex; ISS:PomBase.
GO:0045292; P:nuclear mRNA cis splicing, via spliceosome; ISS:PomBase.
763P40055    554   UTP7_YEAST U3 small nucleolar RNA-associated ...766.1     33.9     22     57GO:0030686; C:90S preribosome; IDA:SGD.::GO:0005730; C:nucleolus; IDA:SGD.::GO:0032040; C:small-subunit processome; IDA:SGD.
GO:0000480; P:endonucleolytic cleavage in 5'-ETS of tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA); IMP:SGD.::GO:0000447; P:endonucleolytic cleavage in ITS1 to separate SSU-rRNA from 5.8S rRNA and LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA); IMP:SGD.::GO:0000472; P:endonucleolytic cleavage to generate mature 5'-end of SSU-rRNA from (SSU-rRNA, 5.8S rRNA, LSU-rRNA); IMP:SGD.
764B8M7Q5    667   SCONB_TALSN Probable E3 ubiquitin ligase comp...506.1     33.9     38     58
GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
765Q38884    328   EIF3I_ARATH Eukaryotic translation initiation...416.1     33.9     34     56GO:0080008; C:CUL4 RING ubiquitin ligase complex; IPI:TAIR.::GO:0005829; C:cytosol; IDA:TAIR.
GO:0005515; F:protein binding; IPI:TAIR.::GO:0003743; F:translation initiation factor activity; IEA:UniProtKB-KW.
GO:0046686; P:response to cadmium ion; IEP:TAIR.::GO:0009651; P:response to salt stress; IEP:TAIR.
766Q5A7Q3    389   PRP46_CANAL Pre-mRNA-splicing factor PRP46 OS...636.1     33.9     27     52GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.::GO:0005681; C:spliceosomal complex; IEA:UniProtKB-KW.
GO:0007049; P:cell cycle; IEA:UniProtKB-KW.::GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.::GO:0008380; P:RNA splicing; IEA:UniProtKB-KW.
767Q6ZMW3    1958   EMAL6_HUMAN Echinoderm microtubule-associated...996.3     34.3     23     49GO:0005737; C:cytoplasm; IEA:UniProtKB-KW.::GO:0005874; C:microtubule; IEA:UniProtKB-KW.
768A2QI22    490   YTM1_ASPNC Ribosome biogenesis protein ytm1 O...586.5     33.9     40     48GO:0005730; C:nucleolus; IEA:UniProtKB-SubCell.::GO:0005654; C:nucleoplasm; IEA:UniProtKB-SubCell.
GO:0006364; P:rRNA processing; IEA:UniProtKB-KW.
769Q2U5Z8    650   MDV1_ASPOR Mitochondrial division protein 1 O...396.7     33.9     38     62GO:0005741; C:mitochondrial outer membrane; IEA:UniProtKB-SubCell.
770Q18DN4    9159   HMU_HALWD Halomucin OS=Haloquadratum walsbyi ...1126.9     34.3     22     46GO:0005576; C:extracellular region; IEA:UniProtKB-SubCell.::GO:0016020; C:membrane; IEA:InterPro.
GO:0005509; F:calcium ion binding; IEA:InterPro.::GO:0030246; F:carbohydrate binding; IEA:InterPro.::GO:0004180; F:carboxypeptidase activity; IEA:InterPro.
GO:0007156; P:homophilic cell adhesion; IEA:InterPro.
771Q8BX17    1502   GEMI5_MOUSE Gem-associated protein 5 OS=Mus m...817     33.9     31     47GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.::GO:0005681; C:spliceosomal complex; IEA:UniProtKB-KW.
GO:0017069; F:snRNA binding; ISS:UniProtKB.
GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.::GO:0008380; P:RNA splicing; IEA:UniProtKB-KW.
772Q93134    316   GBLP_BIOGL Guanine nucleotide-binding protein...707.1     33.5     27     46
773P36909    619   CHIT_STRLI Chitinase C OS=Streptomyces livida...727.2     33.9     31     46
GO:0043169; F:cation binding; IEA:InterPro.::GO:0008061; F:chitin binding; IEA:UniProtKB-KW.::GO:0004568; F:chitinase activity; IEA:EC.
GO:0006032; P:chitin catabolic process; IEA:UniProtKB-KW.
774Q5SQM0    1958   EMAL6_MOUSE Echinoderm microtubule-associated...997.5     33.9     23     49GO:0005737; C:cytoplasm; IEA:UniProtKB-KW.::GO:0005874; C:microtubule; IEA:UniProtKB-KW.
775Q969H0    707   FBXW7_HUMAN F-box/WD repeat-containing protei...488     33.9     33     56GO:0005730; C:nucleolus; IEA:UniProtKB-SubCell.::GO:0005654; C:nucleoplasm; TAS:Reactome.::GO:0043234; C:protein complex; IDA:UniProtKB.::GO:0019005; C:SCF ubiquitin ligase complex; IDA:UniProtKB.
GO:0005515; F:protein binding; IPI:UniProtKB.
GO:0034644; P:cellular response to UV; IDA:UniProtKB.::GO:0044419; P:interspecies interaction between organisms; IEA:UniProtKB-KW.::GO:0055088; P:lipid homeostasis; ISS:BHF-UCL.::GO:0032876; P:negative regulation of DNA endoreduplication; IMP:BHF-UCL.::GO:2000346; P:negative regulation of hepatocyte proliferation; ISS:BHF-UCL.::GO:0045746; P:negative regulation of Notch signaling pathway; ISS:BHF-UCL.::GO:2000639; P:negative regulation of SREBP-mediated signaling pathway; ISS:BHF-UCL.::GO:0010868; P:negative regulation of triglyceride biosynthetic process; ISS:BHF-UCL.::GO:0007219; P:Notch signaling pathway; TAS:Reactome.::GO:0045741; P:positive regulation of epidermal growth factor-activated receptor activity; IDA:BHF-UCL.::GO:0070374; P:positive regulation of ERK1 and ERK2 cascade; IMP:BHF-UCL.::GO:2000060; P:positive regulation of protein ubiquitination involved in ubiquitin-dependent protein catabolic process; IDA:BHF-UCL.::GO:0050821; P:protein stabilization; IDA:BHF-UCL.::GO:0016567; P:protein ubiquitination; IDA:UniProtKB.::GO:0010883; P:regulation of lipid storage; ISS:BHF-UCL.::GO:0032880; P:regulation of protein localization; ISS:BHF-UCL.::GO:0006974; P:response to DNA damage stimulus; IDA:UniProtKB.::GO:0031146; P:SCF-dependent proteasomal ubiquitin-dependent protein catabolic process; IDA:UniProtKB.::GO:0007062; P:sister chromatid cohesion; IMP:BHF-UCL.::GO:0001944; P:vasculature development; TAS:BHF-UCL.
776Q6PNC0    3013   DMXL1_MOUSE DmX-like protein 1 OS=Mus musculu...358.2     33.9     29     63
777A1C7E4    700   SCONB_ASPCL Probable E3 ubiquitin ligase comp...468.3     33.5     37     59
GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
778Q4WEI5    436   HAT2_ASPFU Histone acetyltransferase type B s...1008.8     33.5     26     47GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.::GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0016568; P:chromatin modification; IEA:UniProtKB-KW.::GO:0006281; P:DNA repair; IEA:UniProtKB-KW.
779Q9Y485    3027   DMXL1_HUMAN DmX-like protein 1 OS=Homo sapien...379.1     33.9     27     62
780Q12024    460   YTM1_YEAST Ribosome biogenesis protein YTM1 O...439.3     33.5     40     58GO:0005654; C:nucleoplasm; IEA:UniProtKB-SubCell.::GO:0070545; C:PeBoW complex; IDA:SGD.::GO:0030687; C:preribosome, large subunit precursor; IDA:SGD.
GO:0005515; F:protein binding; IPI:IntAct.
GO:0051276; P:chromosome organization; IGI:SGD.::GO:0042273; P:ribosomal large subunit biogenesis; IMP:SGD.::GO:0006364; P:rRNA processing; IEA:UniProtKB-KW.
781A6ZPA9    460   YTM1_YEAS7 Ribosome biogenesis protein YTM1 O...439.3     33.5     40     58GO:0005730; C:nucleolus; IEA:UniProtKB-SubCell.::GO:0005654; C:nucleoplasm; IEA:UniProtKB-SubCell.
GO:0006364; P:rRNA processing; IEA:UniProtKB-KW.
records
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