Fungal Genome Collection
University of Nebraska Lincoln
School of Biological Sciences and Center for Plant Science Innovation
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UniProt_SwissProt BLAST: Single locus
Species:
Saccharomyces cerevisiae S288C
Locus:
YMR049C
Length:
807
Number of sequences:
5887
Description:
YMR049C ERB1 SGDID:S000004652, Chr XIII from 370517-368094, Genome Release 64-1-1, reverse complement, Verified ORF, "Constituent of 66S pre-ribosomal particles, forms a complex with Nop7p and Ytm1p that is required for maturation of the large ribosomal subunit; required for maturation of the 25S and 5.8S ribosomal RNAs; homologous to mammalian Bop1"
rec.SubjectHit LengthDescriptionAlign.LenE valueBit score% ident.  % pos.GO associations
721O74309    807   SLM9_SCHPO Histone transcription regulator sl...803.4     35     31     51GO:0005829; C:cytosol; IDA:PomBase.::GO:0000417; C:HIR complex; IDA:PomBase.::GO:0000790; C:nuclear chromatin; IC:PomBase.
GO:0005515; F:protein binding; IPI:IntAct.::GO:0003714; F:transcription corepressor activity; TAS:PomBase.
GO:0034613; P:cellular protein localization; IGI:PomBase.::GO:0006995; P:cellular response to nitrogen starvation; IMP:PomBase.::GO:0016568; P:chromatin modification; IEA:UniProtKB-KW.::GO:0030702; P:chromatin silencing at centromere; IMP:PomBase.::GO:0030466; P:chromatin silencing at silent mating-type cassette; IMP:PomBase.::GO:0006336; P:DNA replication-independent nucleosome assembly; TAS:PomBase.::GO:0000070; P:mitotic sister chromatid segregation; IMP:PomBase.::GO:0007070; P:negative regulation of transcription from RNA polymerase II promoter during mitosis; IMP:PomBase.::GO:0010389; P:regulation of G2/M transition of mitotic cell cycle; IMP:PomBase.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
722Q95JL5    571   WDR16_MACFA WD repeat-containing protein 16 O...333.4     34.7     48     67GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
723P79959    340   GBB1_XENLA Guanine nucleotide-binding protein...443.4     34.7     32     57
GO:0004871; F:signal transducer activity; IEA:UniProtKB-KW.
724Q5F201    620   WDR16_MOUSE WD repeat-containing protein 16 O...333.4     34.7     48     67GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
725A7TH19    347   EIF3I_VANPO Eukaryotic translation initiation...423.5     34.7     33     60GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0003743; F:translation initiation factor activity; IEA:UniProtKB-KW.
726Q6ZPG2    1874   WDR90_MOUSE WD repeat-containing protein 90 O...643.5     35     27     47
727P20053    465   PRP4_YEAST U4/U6 small nuclear ribonucleoprot...333.5     34.7     42     64GO:0046540; C:U4/U6 x U5 tri-snRNP complex; IDA:SGD.
GO:0005515; F:protein binding; IPI:IntAct.
GO:0000398; P:nuclear mRNA splicing, via spliceosome; IPI:SGD.
728Q01369    316   GBLP_NEUCR Guanine nucleotide-binding protein...433.6     34.3     33     56
729Q8HXL3    1541   WDR62_PIG WD repeat-containing protein 62 OS=...983.6     35     29     48GO:0005634; C:nucleus; ISS:UniProtKB.
GO:0021987; P:cerebral cortex development; ISS:UniProtKB.
730A0CH87    403   LIS12_PARTE Lissencephaly-1 homolog 2 OS=Para...323.7     34.7     34     66GO:0005874; C:microtubule; IEA:UniProtKB-KW.::GO:0005815; C:microtubule organizing center; IEA:UniProtKB-SubCell.
GO:0051301; P:cell division; IEA:UniProtKB-KW.::GO:0007067; P:mitosis; IEA:UniProtKB-KW.::GO:0006810; P:transport; IEA:UniProtKB-KW.
731Q2GP45    452   CIAO1_CHAGB Probable cytosolic iron-sulfur pr...703.7     34.7     29     56
732Q8N1V2    620   WDR16_HUMAN WD repeat-containing protein 16 O...333.7     34.7     48     67GO:0005737; C:cytoplasm; IDA:HPA.::GO:0043231; C:intracellular membrane-bounded organelle; IDA:HPA.
GO:0005515; F:protein binding; IPI:UniProtKB.
733Q5U2W5    800   TBL3_RAT Transducin beta-like protein 3 OS=Ra...343.8     34.7     44     62GO:0005730; C:nucleolus; IEA:UniProtKB-SubCell.::GO:0032040; C:small-subunit processome; IEA:InterPro.
GO:0006364; P:rRNA processing; IEA:InterPro.
734A8M2A6    452   PAFA_SALAI Pup--protein ligase OS=Salinispora...893.9     34.7     29     46
GO:0016881; F:acid-amino acid ligase activity; IEA:EC.::GO:0005524; F:ATP binding; IEA:UniProtKB-KW.
GO:0019941; P:modification-dependent protein catabolic process; IEA:InterPro.::GO:0010498; P:proteasomal protein catabolic process; IEA:InterPro.
735B7QKS1    315   CIAO1_IXOSC Probable cytosolic iron-sulfur pr...375.1     33.9     43     59
GO:0016226; P:iron-sulfur cluster assembly; ISS:UniProtKB.
736Q8C4J7    801   TBL3_MOUSE Transducin beta-like protein 3 OS=...344.1     34.7     44     62GO:0005730; C:nucleolus; IEA:UniProtKB-SubCell.::GO:0032040; C:small-subunit processome; IEA:InterPro.
GO:0006364; P:rRNA processing; IEA:InterPro.
737P0CS30    440   CIAO1_CRYNJ Probable cytosolic iron-sulfur pr...504.1     34.3     42     52
738P0CS31    440   CIAO1_CRYNB Probable cytosolic iron-sulfur pr...504.1     34.3     42     52
739B6Q4Z5    660   SCONB_PENMQ Probable E3 ubiquitin ligase comp...504.2     34.7     38     58
GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
740P87177    922   YB1C_SCHPO Uncharacterized WD repeat-containi...404.3     34.7     40     58GO:0005829; C:cytosol; IDA:PomBase.::GO:0005634; C:nucleus; IDA:PomBase.::GO:0032040; C:small-subunit processome; ISS:PomBase.
GO:0030515; F:snoRNA binding; ISS:PomBase.
GO:0030490; P:maturation of SSU-rRNA; ISS:PomBase.
741P90917    412   RBA1_CAEEL Probable histone-binding protein r...514.4     34.3     37     55GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0005515; F:protein binding; IPI:WormBase.
GO:0001708; P:cell fate specification; IMP:WormBase.::GO:0016568; P:chromatin modification; IEA:UniProtKB-KW.::GO:0009792; P:embryo development ending in birth or egg hatching; IMP:WormBase.::GO:0001703; P:gastrulation with mouth forming first; IMP:WormBase.::GO:0040035; P:hermaphrodite genitalia development; IMP:WormBase.::GO:0040011; P:locomotion; IMP:WormBase.::GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0016246; P:RNA interference; IMP:WormBase.::GO:0045138; P:tail tip morphogenesis; IMP:WormBase.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
742Q9VTV1    350   THOC6_DROME THO complex subunit 6 OS=Drosophi...774.5     34.3     31     55GO:0000347; C:THO complex; IDA:UniProtKB.
GO:0008283; P:cell proliferation; IMP:UniProtKB.::GO:0009408; P:response to heat; IMP:UniProtKB.
743O22785    525   PR19B_ARATH Pre-mRNA-processing factor 19 hom...344.8     34.3     41     71GO:0005618; C:cell wall; IDA:TAIR.::GO:0009507; C:chloroplast; IDA:TAIR.::GO:0080008; C:CUL4 RING ubiquitin ligase complex; ISS:TAIR.::GO:0005681; C:spliceosomal complex; IEA:UniProtKB-KW.
GO:0003677; F:DNA binding; IEA:UniProtKB-KW.::GO:0004842; F:ubiquitin-protein ligase activity; IEA:InterPro.
GO:0042742; P:defense response to bacterium; IGI:TAIR.::GO:0006281; P:DNA repair; IEA:UniProtKB-KW.::GO:0045087; P:innate immune response; IEA:UniProtKB-KW.::GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.::GO:0008380; P:RNA splicing; IEA:UniProtKB-KW.
744Q8IZU2    1322   WDR17_HUMAN WD repeat-containing protein 17 O...365.1     34.3     44     67
745Q29KQ0    419   WDR12_DROPS Ribosome biogenesis protein WDR12...385.3     33.9     37     61GO:0005654; C:nucleoplasm; IEA:UniProtKB-SubCell.::GO:0070545; C:PeBoW complex; ISS:UniProtKB.
GO:0000463; P:maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA); ISS:UniProtKB.
746B4GT01    419   WDR12_DROPE Ribosome biogenesis protein WDR12...385.3     33.9     37     61GO:0005654; C:nucleoplasm; IEA:UniProtKB-SubCell.::GO:0070545; C:PeBoW complex; ISS:UniProtKB.
GO:0000463; P:maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA); ISS:UniProtKB.
747P74598    348   Y1491_SYNY3 Uncharacterized WD repeat-contain...365.4     33.9     39     67GO:0030288; C:outer membrane-bounded periplasmic space; IDA:UniProtKB.
748Q148I1    392   PAAF1_BOVIN Proteasomal ATPase-associated fac...515.5     33.9     33     49GO:0000502; C:proteasome complex; IEA:UniProtKB-KW.
749Q1DZQ0    304   SEC13_COCIM Protein transport protein SEC13 O...1335.6     33.9     27     37GO:0005789; C:endoplasmic reticulum membrane; IEA:UniProtKB-SubCell.::GO:0012507; C:ER to Golgi transport vesicle membrane; IEA:UniProtKB-SubCell.::GO:0005643; C:nuclear pore; IEA:UniProtKB-SubCell.
GO:0051028; P:mRNA transport; IEA:UniProtKB-KW.::GO:0015031; P:protein transport; IEA:UniProtKB-KW.::GO:0016192; P:vesicle-mediated transport; IEA:UniProtKB-KW.
750Q8L4M1    367   DWA1_ARATH WD repeat-containing protein DWA1 ...405.7     33.9     38     58GO:0080008; C:CUL4 RING ubiquitin ligase complex; IPI:TAIR.::GO:0005634; C:nucleus; IDA:UniProtKB.
GO:0005515; F:protein binding; IPI:UniProtKB.
GO:0009738; P:abscisic acid mediated signaling pathway; IEA:UniProtKB-KW.::GO:0009788; P:negative regulation of abscisic acid mediated signaling pathway; IMP:UniProtKB.::GO:0010267; P:production of ta-siRNAs involved in RNA interference; IMP:TAIR.::GO:0016567; P:protein ubiquitination; IMP:UniProtKB.
751A3LNW3    302   SEC13_PICST Protein transport protein SEC13 O...795.7     33.9     34     54GO:0005789; C:endoplasmic reticulum membrane; IEA:UniProtKB-SubCell.::GO:0012507; C:ER to Golgi transport vesicle membrane; IEA:UniProtKB-SubCell.::GO:0005643; C:nuclear pore; IEA:UniProtKB-SubCell.
GO:0051028; P:mRNA transport; IEA:UniProtKB-KW.::GO:0015031; P:protein transport; IEA:UniProtKB-KW.::GO:0016192; P:vesicle-mediated transport; IEA:UniProtKB-KW.
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