rec. | Subject | Hit Length | Description | Align.Len | E value | Bit score | % ident. | % pos. | GO associations |
31 | Q8BQZ5 | 211 | CPSF4_MOUSE Cleavage and polyadenylation spec... | 49 | 0.18 | 37.7 | 35 | 53 | GO:0005847; C:mRNA cleavage and polyadenylation specificity factor complex; ISS:UniProtKB. | | | | | | | | | | GO:0003723; F:RNA binding; IEA:UniProtKB-KW.::GO:0008270; F:zinc ion binding; IEA:InterPro. | | | | | | | | | | GO:0006397; P:mRNA processing; IEA:UniProtKB-KW. | 32 | Q8IXZ2 | 948 | ZC3H3_HUMAN Zinc finger CCCH domain-containin... | 39 | 0.55 | 37.4 | 41 | 51 | GO:0005634; C:nucleus; IDA:UniProtKB. | | | | | | | | | | GO:0003676; F:nucleic acid binding; IEA:InterPro.::GO:0008270; F:zinc ion binding; IEA:InterPro. | | | | | | | | | | GO:0006378; P:mRNA polyadenylation; IMP:UniProtKB.::GO:0016973; P:poly(A)+ mRNA export from nucleus; IMP:UniProtKB.::GO:0010793; P:regulation of mRNA export from nucleus; IMP:UniProtKB. | 33 | Q5H7N8 | 429 | ZC3HF_CHICK Zinc finger CCCH domain-containin... | 96 | 0.0008 | 46.2 | 30 | 43 | GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.::GO:0005634; C:nucleus; IEA:UniProtKB-SubCell. | | | | | | | | | | GO:0003676; F:nucleic acid binding; IEA:InterPro.::GO:0008270; F:zinc ion binding; IEA:InterPro. | | | | | | | | | | | 34 | Q8N5P1 | 291 | ZC3H8_HUMAN Zinc finger CCCH domain-containin... | 48 | 0.002 | 44.7 | 33 | 54 | GO:0005634; C:nucleus; ISS:UniProtKB. | | | | | | | | | | GO:0003723; F:RNA binding; IEA:UniProtKB-KW.::GO:0043565; F:sequence-specific DNA binding; ISS:UniProtKB.::GO:0003700; F:sequence-specific DNA binding transcription factor activity; IMP:UniProtKB.::GO:0008270; F:zinc ion binding; IEA:InterPro. | | | | | | | | | | GO:0006915; P:apoptotic process; IEA:UniProtKB-KW.::GO:0033085; P:negative regulation of T cell differentiation in thymus; IMP:UniProtKB.::GO:0045892; P:negative regulation of transcription, DNA-dependent; IDA:UniProtKB.::GO:0070245; P:positive regulation of thymocyte apoptotic process; IMP:UniProtKB.::GO:0046677; P:response to antibiotic; IDA:UniProtKB.::GO:0043029; P:T cell homeostasis; IMP:UniProtKB.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW. | 35 | P0CS64 | 332 | YTH1_CRYNJ mRNA 3'-end-processing protein YTH... | 71 | 0.002 | 44.3 | 30 | 51 | GO:0005634; C:nucleus; IEA:UniProtKB-SubCell. | | | | | | | | | | GO:0003723; F:RNA binding; IEA:UniProtKB-KW.::GO:0008270; F:zinc ion binding; IEA:InterPro. | | | | | | | | | | GO:0006397; P:mRNA processing; IEA:UniProtKB-KW. | 36 | P0CS65 | 332 | YTH1_CRYNB mRNA 3'-end-processing protein YTH... | 71 | 0.002 | 44.3 | 30 | 51 | GO:0005634; C:nucleus; IEA:UniProtKB-SubCell. | | | | | | | | | | GO:0003723; F:RNA binding; IEA:UniProtKB-KW.::GO:0008270; F:zinc ion binding; IEA:InterPro. | | | | | | | | | | GO:0006397; P:mRNA processing; IEA:UniProtKB-KW. | 37 | Q803J8 | 433 | ZC3HF_DANRE Zinc finger CCCH domain-containin... | 52 | 0.002 | 44.7 | 42 | 56 | GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.::GO:0005634; C:nucleus; IEA:UniProtKB-SubCell. | | | | | | | | | | GO:0003676; F:nucleic acid binding; IEA:InterPro.::GO:0008270; F:zinc ion binding; IEA:InterPro. | | | | | | | | | | | 38 | Q9LTS7 | 675 | C3H65_ARATH Zinc finger CCCH domain-containin... | 50 | 0.074 | 40 | 36 | 50 | | | | | | | | | | | GO:0003677; F:DNA binding; IEA:UniProtKB-KW.::GO:0004518; F:nuclease activity; IEA:UniProtKB-KW.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW.::GO:0008270; F:zinc ion binding; IEA:InterPro. | | | | | | | | | | | 39 | O95639 | 269 | CPSF4_HUMAN Cleavage and polyadenylation spec... | 119 | 0.64 | 36.2 | 22 | 43 | GO:0005847; C:mRNA cleavage and polyadenylation specificity factor complex; IDA:UniProtKB. | | | | | | | | | | GO:0003723; F:RNA binding; IEA:UniProtKB-KW.::GO:0008270; F:zinc ion binding; IEA:InterPro. | | | | | | | | | | GO:0046778; P:modification by virus of host mRNA processing; TAS:Reactome.::GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.::GO:0019058; P:viral infectious cycle; TAS:Reactome. | 40 | Q6C922 | 193 | YTH1_YARLI mRNA 3'-end-processing protein YTH... | 56 | 0.26 | 37 | 32 | 50 | GO:0005634; C:nucleus; IEA:UniProtKB-SubCell. | | | | | | | | | | GO:0003723; F:RNA binding; IEA:UniProtKB-KW.::GO:0008270; F:zinc ion binding; IEA:InterPro. | | | | | | | | | | GO:0006397; P:mRNA processing; IEA:UniProtKB-KW. | 41 | Q6DJP7 | 269 | CPSF4_XENLA Cleavage and polyadenylation spec... | 119 | 0.27 | 37.4 | 22 | 44 | GO:0005847; C:mRNA cleavage and polyadenylation specificity factor complex; ISS:UniProtKB. | | | | | | | | | | GO:0003723; F:RNA binding; IEA:UniProtKB-KW.::GO:0008270; F:zinc ion binding; IEA:InterPro. | | | | | | | | | | GO:0006397; P:mRNA processing; IEA:UniProtKB-KW. | 42 | Q1RMM1 | 426 | ZC3HF_BOVIN Zinc finger CCCH domain-containin... | 52 | 0.005 | 43.5 | 40 | 56 | GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell. | | | | | | | | | | GO:0003676; F:nucleic acid binding; IEA:InterPro.::GO:0008270; F:zinc ion binding; IEA:InterPro. | | | | | | | | | | | 43 | Q8WU90 | 426 | ZC3HF_HUMAN Zinc finger CCCH domain-containin... | 52 | 0.005 | 43.5 | 40 | 56 | GO:0005737; C:cytoplasm; IDA:HPA.::GO:0005730; C:nucleolus; IDA:HPA. | | | | | | | | | | GO:0003676; F:nucleic acid binding; IEA:InterPro.::GO:0008270; F:zinc ion binding; IEA:InterPro. | | | | | | | | | | | 44 | Q0DA50 | 665 | C3H45_ORYSJ Zinc finger CCCH domain-containin... | 77 | 1.3 | 35.8 | 31 | 40 | | | | | | | | | | | GO:0003677; F:DNA binding; IEA:UniProtKB-KW.::GO:0008270; F:zinc ion binding; IEA:InterPro. | | | | | | | | | | | 45 | O19137 | 243 | CPSF4_BOVIN Cleavage and polyadenylation spec... | 119 | 0.7 | 36.2 | 22 | 43 | GO:0005847; C:mRNA cleavage and polyadenylation specificity factor complex; ISS:UniProtKB. | | | | | | | | | | GO:0003723; F:RNA binding; IEA:UniProtKB-KW.::GO:0008270; F:zinc ion binding; IEA:InterPro. | | | | | | | | | | GO:0006397; P:mRNA processing; IEA:UniProtKB-KW. | 46 | Q66KE3 | 269 | CPSF4_XENTR Cleavage and polyadenylation spec... | 119 | 0.21 | 37.7 | 22 | 44 | GO:0005847; C:mRNA cleavage and polyadenylation specificity factor complex; ISS:UniProtKB. | | | | | | | | | | GO:0003723; F:RNA binding; IEA:UniProtKB-KW.::GO:0008270; F:zinc ion binding; IEA:InterPro. | | | | | | | | | | GO:0006397; P:mRNA processing; IEA:UniProtKB-KW. | 47 | Q6U6G5 | 426 | ZC3HF_RAT Zinc finger CCCH domain-containing ... | 52 | 0.006 | 43.5 | 40 | 56 | GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.::GO:0005634; C:nucleus; IEA:UniProtKB-SubCell. | | | | | | | | | | GO:0003676; F:nucleic acid binding; IEA:InterPro.::GO:0008270; F:zinc ion binding; IEA:InterPro. | | | | | | | | | | | 48 | Q28Y69 | 406 | ZC3HF_DROPS Zinc finger CCCH domain-containin... | 25 | 0.006 | 43.1 | 60 | 72 | | | | | | | | | | | GO:0003676; F:nucleic acid binding; IEA:InterPro.::GO:0008270; F:zinc ion binding; IEA:InterPro. | | | | | | | | | | | 49 | Q6DD06 | 426 | ZC3HF_XENLA Zinc finger CCCH domain-containin... | 25 | 0.006 | 43.1 | 60 | 72 | GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.::GO:0005634; C:nucleus; IEA:UniProtKB-SubCell. | | | | | | | | | | GO:0003676; F:nucleic acid binding; IEA:InterPro.::GO:0008270; F:zinc ion binding; IEA:InterPro. | | | | | | | | | | | 50 | Q5FVR7 | 243 | CPSF4_RAT Cleavage and polyadenylation specif... | 119 | 0.81 | 35.8 | 22 | 43 | GO:0005847; C:mRNA cleavage and polyadenylation specificity factor complex; ISS:UniProtKB. | | | | | | | | | | GO:0003723; F:RNA binding; IEA:UniProtKB-KW.::GO:0008270; F:zinc ion binding; IEA:InterPro. | | | | | | | | | | GO:0006397; P:mRNA processing; IEA:UniProtKB-KW. | 51 | Q3TIV5 | 426 | ZC3HF_MOUSE Zinc finger CCCH domain-containin... | 52 | 0.006 | 43.1 | 40 | 56 | GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell. | | | | | | | | | | GO:0003676; F:nucleic acid binding; IEA:InterPro.::GO:0008270; F:zinc ion binding; IEA:InterPro. | | | | | | | | | | GO:0019221; P:cytokine-mediated signaling pathway; IDA:MGI. | 52 | O75152 | 810 | ZC11A_HUMAN Zinc finger CCCH domain-containin... | 55 | 0.008 | 43.1 | 35 | 51 | | | | | | | | | | | GO:0003676; F:nucleic acid binding; IEA:InterPro.::GO:0005515; F:protein binding; IPI:IntAct.::GO:0008270; F:zinc ion binding; IEA:InterPro. | | | | | | | | | | | 53 | A4IGY3 | 426 | ZC3HF_XENTR Zinc finger CCCH domain-containin... | 82 | 0.008 | 42.7 | 33 | 43 | GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.::GO:0005634; C:nucleus; IEA:UniProtKB-SubCell. | | | | | | | | | | GO:0003676; F:nucleic acid binding; IEA:InterPro.::GO:0008270; F:zinc ion binding; IEA:InterPro. | | | | | | | | | | | 54 | Q7JWR9 | 404 | ZC3HF_DROME Zinc finger CCCH domain-containin... | 24 | 0.012 | 42.4 | 63 | 71 | | | | | | | | | | | GO:0003676; F:nucleic acid binding; IEA:InterPro.::GO:0008270; F:zinc ion binding; IEA:InterPro. | | | | | | | | | | | 55 | Q9SD61 | 352 | C3H42_ARATH Zinc finger CCCH domain-containin... | 69 | 0.02 | 41.2 | 29 | 39 | | | | | | | | | | | GO:0003677; F:DNA binding; IEA:UniProtKB-KW.::GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW.::GO:0008270; F:zinc ion binding; IEA:InterPro. | | | | | | | | | | | 56 | Q6NZF1 | 792 | ZC11A_MOUSE Zinc finger CCCH domain-containin... | 55 | 0.021 | 42 | 33 | 51 | | | | | | | | | | | GO:0003676; F:nucleic acid binding; IEA:InterPro.::GO:0008270; F:zinc ion binding; IEA:InterPro. | | | | | | | | | | | 57 | Q6FTL0 | 209 | YTH1_CANGA mRNA 3'-end-processing protein YTH... | 76 | 0.027 | 40.4 | 28 | 45 | GO:0005634; C:nucleus; IEA:UniProtKB-SubCell. | | | | | | | | | | GO:0003723; F:RNA binding; IEA:UniProtKB-KW.::GO:0008270; F:zinc ion binding; IEA:InterPro. | | | | | | | | | | GO:0006397; P:mRNA processing; IEA:UniProtKB-KW. | 58 | Q59T36 | 215 | YTH1_CANAL mRNA 3'-end-processing protein YTH... | 75 | 0.32 | 37 | 25 | 51 | GO:0005634; C:nucleus; IEA:UniProtKB-SubCell. | | | | | | | | | | GO:0003723; F:RNA binding; IEA:UniProtKB-KW.::GO:0008270; F:zinc ion binding; IEA:InterPro. | | | | | | | | | | GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.::GO:0042493; P:response to drug; IMP:CGD. | 59 | Q4IPA4 | 411 | YTH1_GIBZE mRNA 3'-end-processing protein YTH... | 99 | 0.032 | 40.8 | 24 | 42 | GO:0005634; C:nucleus; IEA:UniProtKB-SubCell. | | | | | | | | | | GO:0003723; F:RNA binding; IEA:UniProtKB-KW.::GO:0008270; F:zinc ion binding; IEA:InterPro. | | | | | | | | | | GO:0006397; P:mRNA processing; IEA:UniProtKB-KW. | 60 | Q94131 | 335 | PIE1_CAEEL Pharynx and intestine in excess pr... | 135 | 0.037 | 40.4 | 26 | 37 | GO:0005813; C:centrosome; IDA:WormBase.::GO:0005829; C:cytosol; IDA:WormBase.::GO:0005634; C:nucleus; IDA:WormBase.::GO:0043186; C:P granule; IDA:WormBase.::GO:0005819; C:spindle; IEA:UniProtKB-SubCell. | | | | | | | | | | GO:0003677; F:DNA binding; IEA:UniProtKB-KW.::GO:0005515; F:protein binding; IPI:UniProtKB.::GO:0008270; F:zinc ion binding; IEA:InterPro. | | | | | | | | | | GO:0001709; P:cell fate determination; IMP:WormBase.::GO:0008340; P:determination of adult lifespan; IMP:WormBase.::GO:0009792; P:embryo development ending in birth or egg hatching; IMP:WormBase.::GO:0009880; P:embryonic pattern specification; IMP:WormBase.::GO:0001704; P:formation of primary germ layer; IMP:WormBase.::GO:0000122; P:negative regulation of transcription from RNA polymerase II promoter; IDA:WormBase.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW. | 61 | Q9SK74 | 371 | C3H21_ARATH Zinc finger CCCH domain-containin... | 25 | 0.037 | 40.4 | 52 | 72 | | | | | | | | | | | GO:0003677; F:DNA binding; IEA:UniProtKB-KW.::GO:0008270; F:zinc ion binding; IEA:InterPro. | | | | | | | | | | |