rec. | Subject | Hit Length | Description | Align.Len | E value | Bit score | % ident. | % pos. | GO associations |
61 | Q6BTT1 | 223 | YTH1_DEBHA mRNA 3'-end-processing protein YTH... | 133 | 1.7 | 33.5 | 23 | 43 | GO:0005634; C:nucleus; IEA:UniProtKB-SubCell. | | | | | | | | | | GO:0003723; F:RNA binding; IEA:UniProtKB-KW.::GO:0008270; F:zinc ion binding; IEA:InterPro. | | | | | | | | | | GO:0006397; P:mRNA processing; IEA:UniProtKB-KW. | 62 | Q5WXX1 | 931 | SYI_LEGPL Isoleucine--tRNA ligase OS=Legionel... | 162 | 1.8 | 34.3 | 22 | 42 | GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell. | | | | | | | | | | GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0004822; F:isoleucine-tRNA ligase activity; IEA:EC.::GO:0046872; F:metal ion binding; IEA:UniProtKB-KW. | | | | | | | | | | GO:0006428; P:isoleucyl-tRNA aminoacylation; IEA:InterPro. | 63 | Q6GLD9 | 418 | MKRN2_XENTR Probable E3 ubiquitin-protein lig... | 41 | 1.9 | 33.9 | 32 | 51 | | | | | | | | | | | GO:0016874; F:ligase activity; IEA:UniProtKB-KW.::GO:0003676; F:nucleic acid binding; IEA:InterPro.::GO:0008270; F:zinc ion binding; IEA:InterPro. | | | | | | | | | | GO:0009798; P:axis specification; ISS:BHF-UCL.::GO:0009790; P:embryo development; ISS:UniProtKB.::GO:0050768; P:negative regulation of neurogenesis; ISS:UniProtKB.::GO:0014065; P:phosphatidylinositol 3-kinase cascade; ISS:UniProtKB.::GO:0045944; P:positive regulation of transcription from RNA polymerase II promoter; ISS:UniProtKB.::GO:0043491; P:protein kinase B signaling cascade; ISS:UniProtKB.::GO:0006351; P:transcription, DNA-dependent; ISS:UniProtKB. | 64 | Q5X6G6 | 931 | SYI_LEGPA Isoleucine--tRNA ligase OS=Legionel... | 162 | 2.1 | 34.3 | 22 | 42 | GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell. | | | | | | | | | | GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0004822; F:isoleucine-tRNA ligase activity; IEA:EC.::GO:0046872; F:metal ion binding; IEA:UniProtKB-KW. | | | | | | | | | | GO:0006428; P:isoleucyl-tRNA aminoacylation; IEA:InterPro. | 65 | Q5ZWZ6 | 931 | SYI_LEGPH Isoleucine--tRNA ligase OS=ATCC 331... | 162 | 2.1 | 34.3 | 22 | 42 | GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell. | | | | | | | | | | GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0004822; F:isoleucine-tRNA ligase activity; IEA:EC.::GO:0046872; F:metal ion binding; IEA:UniProtKB-KW. | | | | | | | | | | GO:0006428; P:isoleucyl-tRNA aminoacylation; IEA:InterPro. | 66 | A5IFX5 | 931 | SYI_LEGPC Isoleucine--tRNA ligase OS=Legionel... | 162 | 2.1 | 34.3 | 22 | 42 | GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell. | | | | | | | | | | GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0004822; F:isoleucine-tRNA ligase activity; IEA:EC.::GO:0046872; F:metal ion binding; IEA:UniProtKB-KW. | | | | | | | | | | GO:0006428; P:isoleucyl-tRNA aminoacylation; IEA:InterPro. | 67 | Q6AUG0 | 304 | U2AFB_ORYSJ Splicing factor U2af small subuni... | 51 | 2.1 | 33.5 | 31 | 53 | GO:0005634; C:nucleus; IEA:UniProtKB-SubCell. | | | | | | | | | | GO:0003677; F:DNA binding; IEA:UniProtKB-KW.::GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW.::GO:0008270; F:zinc ion binding; IEA:InterPro. | | | | | | | | | | GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.::GO:0008380; P:RNA splicing; IEA:UniProtKB-KW. | 68 | Q8JFF3 | 435 | MKRN1_SERQU Probable E3 ubiquitin-protein lig... | 25 | 7.6 | 32 | 44 | 68 | | | | | | | | | | | GO:0016874; F:ligase activity; IEA:UniProtKB-KW.::GO:0003676; F:nucleic acid binding; IEA:InterPro.::GO:0008270; F:zinc ion binding; IEA:InterPro. | | | | | | | | | | | 69 | Q1EHT7 | 1007 | C3H4_ORYSJ Zinc finger CCCH domain-containing... | 30 | 2.3 | 33.9 | 40 | 53 | | | | | | | | | | | GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0008026; F:ATP-dependent helicase activity; IEA:InterPro.::GO:0003677; F:DNA binding; IEA:UniProtKB-KW.::GO:0008270; F:zinc ion binding; IEA:InterPro. | | | | | | | | | | | 70 | P0CR50 | 326 | SLT11_CRYNJ Pre-mRNA-splicing factor SLT11 OS... | 22 | 2.3 | 33.5 | 45 | 77 | GO:0005681; C:spliceosomal complex; IEA:UniProtKB-KW. | | | | | | | | | | GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW.::GO:0008270; F:zinc ion binding; IEA:InterPro. | | | | | | | | | | GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.::GO:0008380; P:RNA splicing; IEA:UniProtKB-KW. | 71 | P0CR51 | 326 | SLT11_CRYNB Pre-mRNA-splicing factor SLT11 OS... | 22 | 2.3 | 33.5 | 45 | 77 | GO:0005681; C:spliceosomal complex; IEA:UniProtKB-KW. | | | | | | | | | | GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW.::GO:0008270; F:zinc ion binding; IEA:InterPro. | | | | | | | | | | GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.::GO:0008380; P:RNA splicing; IEA:UniProtKB-KW. | 72 | Q4SRI6 | 372 | MKRN1_TETNG Probable E3 ubiquitin-protein lig... | 25 | 9.9 | 31.6 | 44 | 68 | | | | | | | | | | | GO:0016874; F:ligase activity; IEA:UniProtKB-KW.::GO:0003676; F:nucleic acid binding; IEA:InterPro.::GO:0008270; F:zinc ion binding; IEA:InterPro. | | | | | | | | | | | 73 | Q9ZW36 | 483 | C3H25_ARATH Zinc finger CCCH domain-containin... | 33 | 2.3 | 33.9 | 30 | 64 | | | | | | | | | | | GO:0003677; F:DNA binding; IEA:UniProtKB-KW.::GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW.::GO:0008270; F:zinc ion binding; IEA:InterPro. | | | | | | | | | | | 74 | Q84WU2 | 1115 | UBP13_ARATH Ubiquitin carboxyl-terminal hydro... | 134 | 2.4 | 33.9 | 25 | 43 | GO:0005829; C:cytosol; IDA:TAIR.::GO:0009506; C:plasmodesma; IDA:TAIR. | | | | | | | | | | GO:0008234; F:cysteine-type peptidase activity; IEA:UniProtKB-KW.::GO:0004221; F:ubiquitin thiolesterase activity; IEA:InterPro. | | | | | | | | | | GO:0006511; P:ubiquitin-dependent protein catabolic process; IEA:InterPro. | 75 | O95639 | 269 | CPSF4_HUMAN Cleavage and polyadenylation spec... | 122 | 2.4 | 33.5 | 25 | 43 | GO:0005847; C:mRNA cleavage and polyadenylation specificity factor complex; IDA:UniProtKB. | | | | | | | | | | GO:0003723; F:RNA binding; IEA:UniProtKB-KW.::GO:0008270; F:zinc ion binding; IEA:InterPro. | | | | | | | | | | GO:0046778; P:modification by virus of host mRNA processing; TAS:Reactome.::GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.::GO:0019058; P:viral infectious cycle; TAS:Reactome. | 76 | Q84UQ3 | 367 | C3H56_ORYSJ Zinc finger CCCH domain-containin... | 30 | 2.5 | 33.5 | 47 | 60 | | | | | | | | | | | GO:0003677; F:DNA binding; IEA:UniProtKB-KW.::GO:0008270; F:zinc ion binding; IEA:InterPro. | | | | | | | | | | | 77 | Q5SNN4 | 482 | C3H40_ORYSJ Zinc finger CCCH domain-containin... | 96 | 2.7 | 33.5 | 22 | 47 | | | | | | | | | | | GO:0003677; F:DNA binding; IEA:UniProtKB-KW.::GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW.::GO:0008270; F:zinc ion binding; IEA:InterPro. | | | | | | | | | | | 78 | Q6Z358 | 486 | C3H49_ORYSJ Zinc finger CCCH domain-containin... | 33 | 2.8 | 33.5 | 27 | 67 | | | | | | | | | | | GO:0003677; F:DNA binding; IEA:UniProtKB-KW.::GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW.::GO:0008270; F:zinc ion binding; IEA:InterPro. | | | | | | | | | | | 79 | Q5FVR7 | 243 | CPSF4_RAT Cleavage and polyadenylation specif... | 122 | 2.9 | 33.1 | 25 | 43 | GO:0005847; C:mRNA cleavage and polyadenylation specificity factor complex; ISS:UniProtKB. | | | | | | | | | | GO:0003723; F:RNA binding; IEA:UniProtKB-KW.::GO:0008270; F:zinc ion binding; IEA:InterPro. | | | | | | | | | | GO:0006397; P:mRNA processing; IEA:UniProtKB-KW. | 80 | Q8N5P1 | 291 | ZC3H8_HUMAN Zinc finger CCCH domain-containin... | 34 | 3 | 33.1 | 38 | 56 | GO:0005634; C:nucleus; ISS:UniProtKB. | | | | | | | | | | GO:0003723; F:RNA binding; IEA:UniProtKB-KW.::GO:0043565; F:sequence-specific DNA binding; ISS:UniProtKB.::GO:0003700; F:sequence-specific DNA binding transcription factor activity; IMP:UniProtKB.::GO:0008270; F:zinc ion binding; IEA:InterPro. | | | | | | | | | | GO:0006915; P:apoptotic process; IEA:UniProtKB-KW.::GO:0033085; P:negative regulation of T cell differentiation in thymus; IMP:UniProtKB.::GO:0045892; P:negative regulation of transcription, DNA-dependent; IDA:UniProtKB.::GO:0070245; P:positive regulation of thymocyte apoptotic process; IMP:UniProtKB.::GO:0046677; P:response to antibiotic; IDA:UniProtKB.::GO:0043029; P:T cell homeostasis; IMP:UniProtKB.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW. | 81 | O19137 | 243 | CPSF4_BOVIN Cleavage and polyadenylation spec... | 122 | 3 | 33.1 | 25 | 43 | GO:0005847; C:mRNA cleavage and polyadenylation specificity factor complex; ISS:UniProtKB. | | | | | | | | | | GO:0003723; F:RNA binding; IEA:UniProtKB-KW.::GO:0008270; F:zinc ion binding; IEA:InterPro. | | | | | | | | | | GO:0006397; P:mRNA processing; IEA:UniProtKB-KW. | 82 | Q9JJ48 | 305 | ZC3H8_MOUSE Zinc finger CCCH domain-containin... | 102 | 3 | 33.1 | 22 | 35 | GO:0005634; C:nucleus; IDA:MGI. | | | | | | | | | | GO:0003723; F:RNA binding; IEA:UniProtKB-KW.::GO:0043565; F:sequence-specific DNA binding; IDA:UniProtKB.::GO:0003700; F:sequence-specific DNA binding transcription factor activity; ISS:UniProtKB.::GO:0008270; F:zinc ion binding; IEA:InterPro. | | | | | | | | | | GO:0006915; P:apoptotic process; IEA:UniProtKB-KW.::GO:0033085; P:negative regulation of T cell differentiation in thymus; ISS:UniProtKB.::GO:0045892; P:negative regulation of transcription, DNA-dependent; IMP:UniProtKB.::GO:0070245; P:positive regulation of thymocyte apoptotic process; ISS:UniProtKB.::GO:0046677; P:response to antibiotic; ISS:UniProtKB.::GO:0043029; P:T cell homeostasis; ISS:UniProtKB.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW. | 83 | Q9LTS7 | 675 | C3H65_ARATH Zinc finger CCCH domain-containin... | 31 | 3.2 | 33.5 | 45 | 55 | | | | | | | | | | | GO:0003677; F:DNA binding; IEA:UniProtKB-KW.::GO:0004518; F:nuclease activity; IEA:UniProtKB-KW.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW.::GO:0008270; F:zinc ion binding; IEA:InterPro. | | | | | | | | | | | 84 | Q2URI6 | 255 | YTH1_ASPOR mRNA 3'-end-processing protein yth... | 66 | 3.2 | 33.1 | 27 | 47 | GO:0005634; C:nucleus; IEA:UniProtKB-SubCell. | | | | | | | | | | GO:0003723; F:RNA binding; IEA:UniProtKB-KW.::GO:0008270; F:zinc ion binding; IEA:InterPro. | | | | | | | | | | GO:0006397; P:mRNA processing; IEA:UniProtKB-KW. | 85 | A3BUD2 | 605 | C3H57_ORYSJ Putative zinc finger CCCH domain-... | 40 | 3.3 | 33.5 | 33 | 60 | | | | | | | | | | | GO:0003677; F:DNA binding; IEA:UniProtKB-KW.::GO:0008270; F:zinc ion binding; IEA:InterPro. | | | | | | | | | | | 86 | Q4PGU6 | 324 | SLT11_USTMA Pre-mRNA-splicing factor SLT11 OS... | 73 | 3.3 | 33.1 | 29 | 47 | GO:0005681; C:spliceosomal complex; IEA:UniProtKB-KW. | | | | | | | | | | GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW.::GO:0008270; F:zinc ion binding; IEA:InterPro. | | | | | | | | | | GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.::GO:0008380; P:RNA splicing; IEA:UniProtKB-KW. | 87 | Q4WKD9 | 254 | YTH1_ASPFU mRNA 3'-end-processing protein yth... | 66 | 3.8 | 32.7 | 27 | 47 | GO:0005634; C:nucleus; IEA:UniProtKB-SubCell. | | | | | | | | | | GO:0003723; F:RNA binding; IEA:UniProtKB-KW.::GO:0008270; F:zinc ion binding; IEA:InterPro. | | | | | | | | | | GO:0006397; P:mRNA processing; IEA:UniProtKB-KW. | 88 | Q10B98 | 312 | C3H25_ORYSJ Zinc finger CCCH domain-containin... | 21 | 4.2 | 32.7 | 43 | 71 | | | | | | | | | | | GO:0003677; F:DNA binding; IEA:UniProtKB-KW.::GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW.::GO:0008270; F:zinc ion binding; IEA:InterPro. | | | | | | | | | | | 89 | Q9QXP6 | 481 | MKRN1_MOUSE E3 ubiquitin-protein ligase makor... | 25 | 4.3 | 33.1 | 44 | 68 | | | | | | | | | | | GO:0003682; F:chromatin binding; IDA:MGI.::GO:0016874; F:ligase activity; IEA:UniProtKB-KW.::GO:0003676; F:nucleic acid binding; IEA:InterPro.::GO:0008270; F:zinc ion binding; IEA:InterPro. | | | | | | | | | | | 90 | Q10MN8 | 457 | C3H21_ORYSJ Putative zinc finger CCCH domain-... | 105 | 4.4 | 32.7 | 25 | 39 | | | | | | | | | | | GO:0003677; F:DNA binding; IEA:UniProtKB-KW.::GO:0008270; F:zinc ion binding; IEA:InterPro. | | | | | | | | | | | 91 | Q9UHC7 | 482 | MKRN1_HUMAN E3 ubiquitin-protein ligase makor... | 25 | 4.5 | 32.7 | 44 | 68 | | | | | | | | | | | GO:0016874; F:ligase activity; IEA:UniProtKB-KW.::GO:0003676; F:nucleic acid binding; IEA:InterPro.::GO:0008270; F:zinc ion binding; IEA:InterPro. | | | | | | | | | | |